AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0267920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0267920 MtrunA17_Chr3g0127201 96.587 293 6 3 17 308 1 290 0.0 572
Msa0267920 MtrunA17_Chr8g0346551 48.322 298 119 14 17 308 1 269 1.72e-71 222
Msa0267920 MtrunA17_Chr1g0188851 43.831 308 116 16 1 299 1 260 7.35e-56 182
Msa0267920 MtrunA17_Chr2g0326001 86.364 66 9 0 32 97 29 94 5.18e-37 134
Msa0267920 MtrunA17_Chr3g0117601 33.333 333 162 12 5 308 17 318 1.33e-36 134
Msa0267920 MtrunA17_Chr4g0010151 50.000 140 56 3 28 163 63 192 1.05e-33 126
Msa0267920 MtrunA17_Chr4g0030051 56.897 116 49 1 32 147 30 144 3.98e-33 123
Msa0267920 MtrunA17_Chr3g0126201 61.798 89 30 1 13 97 17 105 5.00e-32 121
Msa0267920 MtrunA17_Chr4g0031411 50.769 130 54 3 28 149 56 183 1.57e-31 120
Msa0267920 MtrunA17_Chr2g0328021 68.354 79 22 1 32 107 51 129 5.47e-31 117
Msa0267920 MtrunA17_Chr8g0367161 67.568 74 24 0 32 105 21 94 6.60e-31 118
Msa0267920 MtrunA17_Chr7g0223311 53.774 106 44 1 11 111 40 145 6.82e-30 116
Msa0267920 MtrunA17_Chr1g0177251 87.037 54 7 0 44 97 13 66 3.24e-29 113
Msa0267920 MtrunA17_Chr8g0374251 76.271 59 14 0 38 96 63 121 4.08e-29 114
Msa0267920 MtrunA17_Chr4g0047001 50.000 122 44 3 45 164 57 163 6.32e-29 114
Msa0267920 MtrunA17_Chr7g0237921 64.865 74 22 1 28 97 57 130 1.06e-28 112
Msa0267920 MtrunA17_Chr8g0374111 58.974 78 31 1 33 109 18 95 4.91e-28 108
Msa0267920 MtrunA17_Chr2g0282441 70.769 65 14 1 30 94 17 76 5.63e-28 110
Msa0267920 MtrunA17_Chr3g0092111 53.763 93 40 1 32 124 125 214 8.09e-28 112
Msa0267920 MtrunA17_Chr8g0341671 71.212 66 17 2 37 101 15 79 1.87e-27 106
Msa0267920 MtrunA17_Chr5g0411951 77.778 54 12 0 40 93 40 93 5.15e-27 108
Msa0267920 MtrunA17_Chr2g0282511 58.427 89 27 1 3 91 15 93 6.98e-27 107
Msa0267920 MtrunA17_Chr4g0047761 65.789 76 21 2 26 97 51 125 8.09e-27 107
Msa0267920 MtrunA17_Chr2g0308011 86.000 50 7 0 42 91 36 85 8.68e-27 104
Msa0267920 MtrunA17_Chr2g0282051 70.149 67 17 2 33 97 34 99 1.45e-26 105
Msa0267920 MtrunA17_Chr4g0042481 58.904 73 30 0 29 101 108 180 2.63e-26 107
Msa0267920 MtrunA17_Chr6g0453321 52.688 93 37 1 8 100 108 193 4.55e-26 107
Msa0267920 MtrunA17_Chr4g0061761 77.358 53 12 0 41 93 38 90 4.72e-26 105
Msa0267920 MtrunA17_Chr7g0217581 64.179 67 24 0 34 100 223 289 6.39e-26 107
Msa0267920 MtrunA17_Chr8g0355261 59.701 67 27 0 32 98 107 173 1.87e-25 105
Msa0267920 MtrunA17_Chr7g0254161 56.098 82 32 1 23 100 77 158 2.19e-25 105
Msa0267920 MtrunA17_Chr5g0417571 59.155 71 29 0 30 100 125 195 2.64e-25 103
Msa0267920 MtrunA17_Chr6g0460721 55.405 74 33 0 27 100 73 146 1.78e-24 101
Msa0267920 MtrunA17_Chr2g0283811 64.912 57 20 0 40 96 44 100 5.34e-24 95.9
Msa0267920 MtrunA17_Chr6g0460731 47.872 94 47 1 27 118 80 173 7.23e-24 100
Msa0267920 MtrunA17_Chr5g0417601 58.209 67 28 0 30 96 127 193 1.19e-22 96.7
Msa0267920 MtrunA17_Chr5g0417551 46.875 96 51 0 10 105 94 189 9.30e-22 94.4
Msa0267920 MtrunA17_Chr5g0417561 63.492 63 23 0 43 105 119 181 1.46e-21 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0267920 AT3G61850.4 38.095 357 139 15 1 308 1 324 1.14e-57 188
Msa0267920 AT3G61850.5 41.554 296 124 13 29 308 50 312 4.59e-56 184
Msa0267920 AT3G61850.1 38.506 348 122 15 1 308 1 296 1.32e-54 180
Msa0267920 AT3G61850.2 42.160 287 107 13 29 308 50 284 2.97e-53 176
Msa0267920 AT3G61850.3 42.160 287 107 13 29 308 50 284 2.97e-53 176
Msa0267920 AT4G24060.1 37.464 347 172 11 1 308 1 341 1.53e-48 165
Msa0267920 AT2G46590.1 40.413 339 130 18 17 308 44 357 7.12e-44 154
Msa0267920 AT2G46590.2 40.708 339 129 19 17 308 56 369 9.17e-44 154
Msa0267920 AT1G64620.1 37.571 354 154 15 1 303 1 338 2.97e-43 152
Msa0267920 AT5G60200.1 57.391 115 40 2 9 114 12 126 1.79e-37 134
Msa0267920 AT3G55370.1 71.951 82 18 2 29 106 59 139 8.53e-34 126
Msa0267920 AT3G55370.3 71.951 82 18 2 29 106 104 184 1.06e-33 127
Msa0267920 AT3G55370.2 71.951 82 18 2 29 106 59 139 1.12e-33 126
Msa0267920 AT2G28510.1 51.538 130 42 3 41 150 46 174 2.21e-33 124
Msa0267920 AT5G60850.1 70.270 74 22 0 41 114 49 122 4.88e-32 121
Msa0267920 AT3G45610.1 56.863 102 41 2 1 102 1 99 6.10e-32 119
Msa0267920 AT4G00940.1 60.185 108 35 2 30 131 57 162 1.01e-31 120
Msa0267920 AT4G00940.3 60.185 108 35 2 30 131 57 162 1.01e-31 120
Msa0267920 AT4G00940.2 60.185 108 35 2 30 131 57 162 1.01e-31 120
Msa0267920 AT1G51700.1 71.831 71 18 2 37 106 28 97 3.34e-30 113
Msa0267920 AT5G65590.1 60.227 88 30 1 16 103 19 101 4.14e-30 116
Msa0267920 AT2G37590.1 67.123 73 21 1 29 98 72 144 1.16e-29 115
Msa0267920 AT5G62940.1 77.049 61 14 0 33 93 63 123 1.28e-29 116
Msa0267920 AT3G52440.1 82.759 58 10 0 45 102 27 84 2.14e-29 112
Msa0267920 AT3G52440.2 82.759 58 10 0 45 102 46 103 2.68e-29 113
Msa0267920 AT5G02460.1 66.216 74 21 1 28 97 76 149 4.05e-29 115
Msa0267920 AT1G21340.1 81.034 58 11 0 45 102 40 97 1.41e-28 110
Msa0267920 AT3G21270.1 84.906 53 8 0 43 95 29 81 2.54e-28 108
Msa0267920 AT1G28310.1 81.818 55 10 0 43 97 27 81 5.47e-28 110
Msa0267920 AT1G28310.2 81.818 55 10 0 43 97 51 105 7.89e-28 110
Msa0267920 AT1G07640.1 65.278 72 22 1 29 97 4 75 1.22e-27 108
Msa0267920 AT1G07640.2 65.278 72 22 1 29 97 60 131 1.23e-27 110
Msa0267920 AT1G07640.3 65.278 72 22 1 29 97 68 139 1.49e-27 110
Msa0267920 AT5G66940.1 67.606 71 21 2 38 107 28 97 2.47e-27 106
Msa0267920 AT4G38000.1 60.526 76 29 1 22 96 20 95 2.91e-27 107
Msa0267920 AT2G28810.2 67.188 64 20 1 31 94 66 128 8.22e-27 107
Msa0267920 AT2G28810.1 67.188 64 20 1 31 94 83 145 1.19e-26 107
Msa0267920 AT3G50410.1 72.308 65 15 2 37 98 22 86 1.46e-26 105
Msa0267920 AT4G21050.1 71.875 64 17 1 45 108 26 88 3.07e-26 103
Msa0267920 AT1G47655.1 58.974 78 30 1 17 92 1 78 7.20e-26 102
Msa0267920 AT1G69570.1 67.742 62 20 0 35 96 124 185 3.49e-25 104
Msa0267920 AT5G39660.3 66.667 63 21 0 38 100 133 195 3.85e-25 105
Msa0267920 AT5G39660.1 66.667 63 21 0 38 100 133 195 3.85e-25 105
Msa0267920 AT5G39660.2 66.667 63 21 0 38 100 133 195 3.85e-25 105
Msa0267920 AT4G21040.1 67.188 64 19 1 45 108 27 88 6.00e-25 100
Msa0267920 AT3G47500.1 68.333 60 19 0 41 100 108 167 6.21e-25 104
Msa0267920 AT2G34140.1 62.903 62 23 0 35 96 50 111 9.99e-25 98.2
Msa0267920 AT1G26790.1 70.175 57 17 0 40 96 108 164 1.11e-24 102
Msa0267920 AT1G29160.1 55.844 77 32 1 20 96 41 115 1.13e-24 98.2
Msa0267920 AT5G62430.1 62.903 62 23 0 41 102 52 113 2.76e-24 100
Msa0267920 AT4G21080.1 49.425 87 32 2 45 121 27 111 1.75e-23 97.1
Msa0267920 AT4G21030.1 49.333 75 32 1 45 119 23 91 1.04e-14 71.6

Find 75 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATAGGTTATTATTATTTA+TGG 0.111949 2_2:+69767105 Msa0267920:three_prime_UTR
TCTTGTCCTTGATGGATCTT+AGG 0.169048 2_2:-69766392 None:intergenic
TTTAAGCTTGGGGTTAATTT+TGG 0.185562 2_2:+69766632 Msa0267920:CDS
TGTTCAAACTCACCACTATT+TGG 0.210892 2_2:-69766809 None:intergenic
ATCAGAACCACTAACAAAAT+AGG 0.243615 2_2:+69767080 Msa0267920:three_prime_UTR
TAAAATAAAATAAAATTAAA+AGG 0.254787 2_2:-69766975 None:intergenic
GGGAGTGGAAGTTTGAAATT+TGG 0.300326 2_2:+69767047 Msa0267920:three_prime_UTR
AAGGTGATTCTACTGGTTAT+TGG 0.303787 2_2:+69766849 Msa0267920:CDS
GAAGGGTTTGAGAATGGTTA+TGG 0.323309 2_2:+69766659 Msa0267920:CDS
GGTTAAGATCTTGTCCTTGA+TGG 0.347085 2_2:-69766400 None:intergenic
GCAAAACTTGTAGAAGGTAT+TGG 0.349440 2_2:+69766183 Msa0267920:CDS
GGTTCTGCTGGTGGTGGTGG+TGG 0.365919 2_2:+69766710 Msa0267920:CDS
TATTGGATTGGTTAAACAAA+TGG 0.368626 2_2:+69766004 Msa0267920:CDS
GAGGGTTCTGCTGGTGGTGG+TGG 0.372229 2_2:+69766707 Msa0267920:CDS
CTTGTCCTTGATGGATCTTA+GGG 0.390118 2_2:-69766391 None:intergenic
TGGAGGATCATGGTAGATAA+TGG 0.412082 2_2:+69766886 Msa0267920:exon
TGAAAACTGCTTCTTCATCA+AGG 0.432756 2_2:+69766531 Msa0267920:CDS
AAGCTCAATGAATTTAGATA+TGG 0.438747 2_2:-69766462 None:intergenic
TCAGAACCACTAACAAAATA+GGG 0.443039 2_2:+69767081 Msa0267920:three_prime_UTR
AACTGATGATCATCTACAAC+AGG 0.454576 2_2:-69766761 None:intergenic
TTGTCTTGATCAGTTGTGTA+AGG 0.463233 2_2:-69766485 None:intergenic
GGTTTAGAAGGGTTTGAGAA+TGG 0.472180 2_2:+69766653 Msa0267920:CDS
CTCTCTAACATAGAAGGTGT+TGG 0.476502 2_2:-69766050 None:intergenic
AATTTAGGGGAATATTGGAT+TGG 0.478716 2_2:+69765992 Msa0267920:intron
GATTCTACTGGTTATTGGAA+TGG 0.482077 2_2:+69766854 Msa0267920:CDS
CTAGACTCAGACAAAGTCAT+AGG 0.485051 2_2:-69766572 None:intergenic
GAAAACTGCTTCTTCATCAA+GGG 0.488666 2_2:+69766532 Msa0267920:CDS
CAGCAACAAATTCCAAATAG+TGG 0.488831 2_2:+69766797 Msa0267920:CDS
TAATTATCCTCAGTTGTTTG+TGG 0.490761 2_2:-69766434 None:intergenic
CAAGAGGGTTCTGCTGGTGG+TGG 0.493771 2_2:+69766704 Msa0267920:CDS
TTGTTTGTGGTGGATAAGCT+AGG 0.500159 2_2:-69766421 None:intergenic
TTTCTTGAACCACCACCTAC+AGG 0.506879 2_2:-69766233 None:intergenic
AGGTTATTATTATTTATGGA+TGG 0.508477 2_2:+69767109 Msa0267920:three_prime_UTR
AGAAATGTTCCTGTAGGTGG+TGG 0.516507 2_2:+69766224 Msa0267920:CDS
AATGGTTATGGTGGCTTGCA+AGG 0.516585 2_2:+69766671 Msa0267920:CDS
AATAATCAAGAGGGTTCTGC+TGG 0.524023 2_2:+69766698 Msa0267920:CDS
TCTTTAAGAAATGTTCCTGT+AGG 0.524165 2_2:+69766218 Msa0267920:CDS
GTGAAGAAAGTGATAAACAA+GGG 0.528045 2_2:+69766926 Msa0267920:three_prime_UTR
GAATGTTCGGTGGAGGATCA+TGG 0.528349 2_2:+69766876 Msa0267920:CDS
TTATCCTCAGTTGTTTGTGG+TGG 0.529976 2_2:-69766431 None:intergenic
TTAAGAAATGTTCCTGTAGG+TGG 0.533560 2_2:+69766221 Msa0267920:CDS
AGACAAAACTACAAGTGCTA+TGG 0.533697 2_2:+69766502 Msa0267920:CDS
AGAACTCAAGGTGATTCTAC+TGG 0.537114 2_2:+69766842 Msa0267920:CDS
ACTAACAAAATAGGGTACAT+AGG 0.541218 2_2:+69767089 Msa0267920:three_prime_UTR
CATCAGCAAAATAGAACTCA+AGG 0.544205 2_2:+69766830 Msa0267920:CDS
ATCTATGGACACAGCTCAGT+GGG 0.545119 2_2:+69765554 Msa0267920:exon
GGTTATTGGAATGGAATGTT+CGG 0.551153 2_2:+69766863 Msa0267920:CDS
GGATTGGTTAAACAAATGGA+TGG 0.552908 2_2:+69766008 Msa0267920:CDS
TGGAATGGAATGTTCGGTGG+AGG 0.558324 2_2:+69766869 Msa0267920:CDS
ATCAAGCTTTAAACTGTCCA+AGG 0.561852 2_2:+69766093 Msa0267920:CDS
GGGTTTGAGAATGGTTATGG+TGG 0.564934 2_2:+69766662 Msa0267920:CDS
AAAACTGCTTCTTCATCAAG+GGG 0.565168 2_2:+69766533 Msa0267920:CDS
AGTGCAATGTATAATTCAAG+TGG 0.566445 2_2:+69766593 Msa0267920:CDS
CAAAACCCTAAGATCCATCA+AGG 0.571674 2_2:+69766386 Msa0267920:CDS
TATTGGAATGGAATGTTCGG+TGG 0.576421 2_2:+69766866 Msa0267920:CDS
CAAGGGATTAATAATCAAGA+GGG 0.577580 2_2:+69766689 Msa0267920:CDS
GCAAGGGATTAATAATCAAG+AGG 0.579146 2_2:+69766688 Msa0267920:CDS
ATGGTTATGGTGGCTTGCAA+GGG 0.581200 2_2:+69766672 Msa0267920:CDS
TGTAGAAGGTATTGGACTGA+AGG 0.583395 2_2:+69766191 Msa0267920:CDS
AAAAGTACCTTGGTTGTGAG+AGG 0.583488 2_2:-69766160 None:intergenic
GGTTGTGATTGTGAGATTGA+AGG 0.587222 2_2:-69766284 None:intergenic
AATCAAGAGGGTTCTGCTGG+TGG 0.591602 2_2:+69766701 Msa0267920:CDS
AGAAGGTATTGGACTGAAGG+TGG 0.592159 2_2:+69766194 Msa0267920:CDS
GAAAGTGATAAACAAGGGGT+TGG 0.599924 2_2:+69766931 Msa0267920:three_prime_UTR
GGACACAGCTCAGTGGGCAC+AGG 0.600044 2_2:+69765560 Msa0267920:CDS
GAATTGGAATATAGTAGTAG+TGG 0.605552 2_2:-69765407 None:intergenic
AGTGAAGAAAGTGATAAACA+AGG 0.620571 2_2:+69766925 Msa0267920:three_prime_UTR
GATTGAAGGTGATGATGATG+AGG 0.631503 2_2:-69766270 None:intergenic
TGAAGAAAGTGATAAACAAG+GGG 0.647930 2_2:+69766927 Msa0267920:three_prime_UTR
ATAACTACAGAAGATTAATG+TGG 0.660579 2_2:+69767204 Msa0267920:three_prime_UTR
ACTATAGCCTCTCACAACCA+AGG 0.671979 2_2:+69766153 Msa0267920:CDS
GTGTTAGTTGAATTGCACCT+TGG 0.675503 2_2:-69766110 None:intergenic
AATCTATGGACACAGCTCAG+TGG 0.676107 2_2:+69765553 Msa0267920:exon
TTATCCACCACAAACAACTG+AGG 0.701982 2_2:+69766427 Msa0267920:CDS
CTATGTTAGAGAGAAAAGCA+AGG 0.712069 2_2:+69766060 Msa0267920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAAAATAAAATTAAA+AGG - chr2_2:69766978-69766997 None:intergenic 0.0%
!! TAAAATAAAATAAAATTAAA+AGG - chr2_2:69766978-69766997 None:intergenic 0.0%
!! AAGTATATAAGAAATAATAA+AGG - chr2_2:69765951-69765970 None:intergenic 10.0%
!!! ATTATTTTTGAAAAATTTAG+GGG + chr2_2:69765979-69765998 Msa0267920:intron 10.0%
!!! TTCTTTAATCTATTTTAATT+TGG + chr2_2:69767144-69767163 Msa0267920:three_prime_UTR 10.0%
!! AAGTATATAAGAAATAATAA+AGG - chr2_2:69765951-69765970 None:intergenic 10.0%
!!! ATTATTTTTGAAAAATTTAG+GGG + chr2_2:69765979-69765998 Msa0267920:intron 10.0%
!!! TTCTTTAATCTATTTTAATT+TGG + chr2_2:69767144-69767163 Msa0267920:three_prime_UTR 10.0%
!! TGATACATAAAACTTTATTA+TGG - chr2_2:69765670-69765689 None:intergenic 15.0%
!! GAAGAAAAAAATAAATGAAA+AGG - chr2_2:69765810-69765829 None:intergenic 15.0%
!!! ATATTTTTTGTTATTGATGA+TGG - chr2_2:69766311-69766330 None:intergenic 15.0%
!! ACATAGGTTATTATTATTTA+TGG + chr2_2:69767105-69767124 Msa0267920:three_prime_UTR 15.0%
!! TGATACATAAAACTTTATTA+TGG - chr2_2:69765670-69765689 None:intergenic 15.0%
!! GAAGAAAAAAATAAATGAAA+AGG - chr2_2:69765810-69765829 None:intergenic 15.0%
!!! ATATTTTTTGTTATTGATGA+TGG - chr2_2:69766311-69766330 None:intergenic 15.0%
!! ACATAGGTTATTATTATTTA+TGG + chr2_2:69767105-69767124 Msa0267920:three_prime_UTR 15.0%
!! TAAGAAGAAAAATGGAAAAA+AGG - chr2_2:69765533-69765552 None:intergenic 20.0%
!! CATAGATTTAAGAAGAAAAA+TGG - chr2_2:69765541-69765560 None:intergenic 20.0%
!!! CATTTTTCTTCTTAAATCTA+TGG + chr2_2:69765539-69765558 Msa0267920:exon 20.0%
!!! TTTTCTTCATGATTATAAGA+AGG - chr2_2:69765615-69765634 None:intergenic 20.0%
!!! AAAACTGAAATTTTTAGTTG+AGG - chr2_2:69765761-69765780 None:intergenic 20.0%
!!! AAATTCATCAACTTTTTCTT+GGG - chr2_2:69765866-69765885 None:intergenic 20.0%
!!! TTTTTCTCATCTTTATCTTT+TGG + chr2_2:69767016-69767035 Msa0267920:three_prime_UTR 20.0%
!! AGGTTATTATTATTTATGGA+TGG + chr2_2:69767109-69767128 Msa0267920:three_prime_UTR 20.0%
!! TAAGAAGAAAAATGGAAAAA+AGG - chr2_2:69765533-69765552 None:intergenic 20.0%
!! CATAGATTTAAGAAGAAAAA+TGG - chr2_2:69765541-69765560 None:intergenic 20.0%
!!! CATTTTTCTTCTTAAATCTA+TGG + chr2_2:69765539-69765558 Msa0267920:exon 20.0%
!!! TTTTCTTCATGATTATAAGA+AGG - chr2_2:69765615-69765634 None:intergenic 20.0%
!!! AAAACTGAAATTTTTAGTTG+AGG - chr2_2:69765761-69765780 None:intergenic 20.0%
!!! AAATTCATCAACTTTTTCTT+GGG - chr2_2:69765866-69765885 None:intergenic 20.0%
!!! TTTTTCTCATCTTTATCTTT+TGG + chr2_2:69767016-69767035 Msa0267920:three_prime_UTR 20.0%
!! AGGTTATTATTATTTATGGA+TGG + chr2_2:69767109-69767128 Msa0267920:three_prime_UTR 20.0%
! TCTAGAAACTAGAAAAAAGT+GGG + chr2_2:69765470-69765489 Msa0267920:five_prime_UTR 25.0%
! GAAAAATGGAAAAAAGGAAA+AGG - chr2_2:69765527-69765546 None:intergenic 25.0%
!!! GTTGATTATTGTTAGTTCTA+AGG + chr2_2:69765698-69765717 Msa0267920:intron 25.0%
!!! CAAATTCATCAACTTTTTCT+TGG - chr2_2:69765867-69765886 None:intergenic 25.0%
! AATAAAGGAAACAAACAAGA+AGG - chr2_2:69765936-69765955 None:intergenic 25.0%
! TGAAAAATTTAGGGGAATAT+TGG + chr2_2:69765987-69766006 Msa0267920:intron 25.0%
!!! TATTGGATTGGTTAAACAAA+TGG + chr2_2:69766004-69766023 Msa0267920:CDS 25.0%
!!! TTTAAAGCTTGATCTTTTTG+TGG - chr2_2:69766086-69766105 None:intergenic 25.0%
!!! TTTTTTGTTATTGATGATGG+AGG - chr2_2:69766308-69766327 None:intergenic 25.0%
! AAGCTCAATGAATTTAGATA+TGG - chr2_2:69766465-69766484 None:intergenic 25.0%
!!! ATCTTTATCTTTTGGTAATG+TGG + chr2_2:69767024-69767043 Msa0267920:three_prime_UTR 25.0%
!!! TCTTTATCTTTTGGTAATGT+GGG + chr2_2:69767025-69767044 Msa0267920:three_prime_UTR 25.0%
! ATAACTACAGAAGATTAATG+TGG + chr2_2:69767204-69767223 Msa0267920:three_prime_UTR 25.0%
! TCTAGAAACTAGAAAAAAGT+GGG + chr2_2:69765470-69765489 Msa0267920:five_prime_UTR 25.0%
! GAAAAATGGAAAAAAGGAAA+AGG - chr2_2:69765527-69765546 None:intergenic 25.0%
!!! GTTGATTATTGTTAGTTCTA+AGG + chr2_2:69765698-69765717 Msa0267920:intron 25.0%
!!! CAAATTCATCAACTTTTTCT+TGG - chr2_2:69765867-69765886 None:intergenic 25.0%
! AATAAAGGAAACAAACAAGA+AGG - chr2_2:69765936-69765955 None:intergenic 25.0%
! TGAAAAATTTAGGGGAATAT+TGG + chr2_2:69765987-69766006 Msa0267920:intron 25.0%
!!! TATTGGATTGGTTAAACAAA+TGG + chr2_2:69766004-69766023 Msa0267920:CDS 25.0%
!!! TTTAAAGCTTGATCTTTTTG+TGG - chr2_2:69766086-69766105 None:intergenic 25.0%
!!! TTTTTTGTTATTGATGATGG+AGG - chr2_2:69766308-69766327 None:intergenic 25.0%
! AAGCTCAATGAATTTAGATA+TGG - chr2_2:69766465-69766484 None:intergenic 25.0%
!!! ATCTTTATCTTTTGGTAATG+TGG + chr2_2:69767024-69767043 Msa0267920:three_prime_UTR 25.0%
!!! TCTTTATCTTTTGGTAATGT+GGG + chr2_2:69767025-69767044 Msa0267920:three_prime_UTR 25.0%
! ATAACTACAGAAGATTAATG+TGG + chr2_2:69767204-69767223 Msa0267920:three_prime_UTR 25.0%
GAATTGGAATATAGTAGTAG+TGG - chr2_2:69765410-69765429 None:intergenic 30.0%
!!! CACTTTTTTCTAGTTTCTAG+AGG - chr2_2:69765471-69765490 None:intergenic 30.0%
! CTCTAGAAACTAGAAAAAAG+TGG + chr2_2:69765469-69765488 Msa0267920:five_prime_UTR 30.0%
GAAGGAAAGAAAACAGAAAA+AGG - chr2_2:69765597-69765616 None:intergenic 30.0%
!!! GAAATTTTTAGTTGAGGATC+AGG - chr2_2:69765755-69765774 None:intergenic 30.0%
! CTTTTTCTTGGGAAAAAGAA+AGG - chr2_2:69765855-69765874 None:intergenic 30.0%
AATTTAGGGGAATATTGGAT+TGG + chr2_2:69765992-69766011 Msa0267920:intron 30.0%
! ACTTTTGCAAAACTTGTAGA+AGG + chr2_2:69766177-69766196 Msa0267920:CDS 30.0%
! TCTTTAAGAAATGTTCCTGT+AGG + chr2_2:69766218-69766237 Msa0267920:CDS 30.0%
TAATTATCCTCAGTTGTTTG+TGG - chr2_2:69766437-69766456 None:intergenic 30.0%
AGTGCAATGTATAATTCAAG+TGG + chr2_2:69766593-69766612 Msa0267920:CDS 30.0%
! CTTTGCAAGATTTTAAGCTT+GGG + chr2_2:69766621-69766640 Msa0267920:CDS 30.0%
! TTTGCAAGATTTTAAGCTTG+GGG + chr2_2:69766622-69766641 Msa0267920:CDS 30.0%
! TTTAAGCTTGGGGTTAATTT+TGG + chr2_2:69766632-69766651 Msa0267920:CDS 30.0%
!!! GGGTTAATTTTGGTTTAGAA+GGG + chr2_2:69766642-69766661 Msa0267920:CDS 30.0%
CAAGGGATTAATAATCAAGA+GGG + chr2_2:69766689-69766708 Msa0267920:CDS 30.0%
AGTGAAGAAAGTGATAAACA+AGG + chr2_2:69766925-69766944 Msa0267920:three_prime_UTR 30.0%
GTGAAGAAAGTGATAAACAA+GGG + chr2_2:69766926-69766945 Msa0267920:three_prime_UTR 30.0%
TGAAGAAAGTGATAAACAAG+GGG + chr2_2:69766927-69766946 Msa0267920:three_prime_UTR 30.0%
!!! CTTTATCTTTTGGTAATGTG+GGG + chr2_2:69767026-69767045 Msa0267920:three_prime_UTR 30.0%
!!! TTTATCTTTTGGTAATGTGG+GGG + chr2_2:69767027-69767046 Msa0267920:three_prime_UTR 30.0%
ATCAGAACCACTAACAAAAT+AGG + chr2_2:69767080-69767099 Msa0267920:three_prime_UTR 30.0%
TCAGAACCACTAACAAAATA+GGG + chr2_2:69767081-69767100 Msa0267920:three_prime_UTR 30.0%
! TATGTACCCTATTTTGTTAG+TGG - chr2_2:69767090-69767109 None:intergenic 30.0%
ACTAACAAAATAGGGTACAT+AGG + chr2_2:69767089-69767108 Msa0267920:three_prime_UTR 30.0%
GAATTGGAATATAGTAGTAG+TGG - chr2_2:69765410-69765429 None:intergenic 30.0%
!!! CACTTTTTTCTAGTTTCTAG+AGG - chr2_2:69765471-69765490 None:intergenic 30.0%
! CTCTAGAAACTAGAAAAAAG+TGG + chr2_2:69765469-69765488 Msa0267920:five_prime_UTR 30.0%
GAAGGAAAGAAAACAGAAAA+AGG - chr2_2:69765597-69765616 None:intergenic 30.0%
!!! GAAATTTTTAGTTGAGGATC+AGG - chr2_2:69765755-69765774 None:intergenic 30.0%
! CTTTTTCTTGGGAAAAAGAA+AGG - chr2_2:69765855-69765874 None:intergenic 30.0%
AATTTAGGGGAATATTGGAT+TGG + chr2_2:69765992-69766011 Msa0267920:intron 30.0%
! ACTTTTGCAAAACTTGTAGA+AGG + chr2_2:69766177-69766196 Msa0267920:CDS 30.0%
! TCTTTAAGAAATGTTCCTGT+AGG + chr2_2:69766218-69766237 Msa0267920:CDS 30.0%
TAATTATCCTCAGTTGTTTG+TGG - chr2_2:69766437-69766456 None:intergenic 30.0%
AGTGCAATGTATAATTCAAG+TGG + chr2_2:69766593-69766612 Msa0267920:CDS 30.0%
! CTTTGCAAGATTTTAAGCTT+GGG + chr2_2:69766621-69766640 Msa0267920:CDS 30.0%
! TTTGCAAGATTTTAAGCTTG+GGG + chr2_2:69766622-69766641 Msa0267920:CDS 30.0%
! TTTAAGCTTGGGGTTAATTT+TGG + chr2_2:69766632-69766651 Msa0267920:CDS 30.0%
!!! GGGTTAATTTTGGTTTAGAA+GGG + chr2_2:69766642-69766661 Msa0267920:CDS 30.0%
CAAGGGATTAATAATCAAGA+GGG + chr2_2:69766689-69766708 Msa0267920:CDS 30.0%
AGTGAAGAAAGTGATAAACA+AGG + chr2_2:69766925-69766944 Msa0267920:three_prime_UTR 30.0%
GTGAAGAAAGTGATAAACAA+GGG + chr2_2:69766926-69766945 Msa0267920:three_prime_UTR 30.0%
TGAAGAAAGTGATAAACAAG+GGG + chr2_2:69766927-69766946 Msa0267920:three_prime_UTR 30.0%
!!! CTTTATCTTTTGGTAATGTG+GGG + chr2_2:69767026-69767045 Msa0267920:three_prime_UTR 30.0%
!!! TTTATCTTTTGGTAATGTGG+GGG + chr2_2:69767027-69767046 Msa0267920:three_prime_UTR 30.0%
ATCAGAACCACTAACAAAAT+AGG + chr2_2:69767080-69767099 Msa0267920:three_prime_UTR 30.0%
TCAGAACCACTAACAAAATA+GGG + chr2_2:69767081-69767100 Msa0267920:three_prime_UTR 30.0%
! TATGTACCCTATTTTGTTAG+TGG - chr2_2:69767090-69767109 None:intergenic 30.0%
ACTAACAAAATAGGGTACAT+AGG + chr2_2:69767089-69767108 Msa0267920:three_prime_UTR 30.0%
!!! AAGCTTTTGAGACTTGGAAT+TGG - chr2_2:69765426-69765445 None:intergenic 35.0%
!!! TGCATAAAGCTTTTGAGACT+TGG - chr2_2:69765432-69765451 None:intergenic 35.0%
AGGATCAGGAAAAGTAGTAA+AGG - chr2_2:69765741-69765760 None:intergenic 35.0%
!! GGATTGGTTAAACAAATGGA+TGG + chr2_2:69766008-69766027 Msa0267920:CDS 35.0%
! GCTTTTCTCTCTAACATAGA+AGG - chr2_2:69766059-69766078 None:intergenic 35.0%
CTATGTTAGAGAGAAAAGCA+AGG + chr2_2:69766060-69766079 Msa0267920:CDS 35.0%
!! ATCAAGCTTTAAACTGTCCA+AGG + chr2_2:69766093-69766112 Msa0267920:CDS 35.0%
!!! CAAGTTTTGCAAAAGTACCT+TGG - chr2_2:69766173-69766192 None:intergenic 35.0%
! GCAAAACTTGTAGAAGGTAT+TGG + chr2_2:69766183-69766202 Msa0267920:CDS 35.0%
TTAAGAAATGTTCCTGTAGG+TGG + chr2_2:69766221-69766240 Msa0267920:CDS 35.0%
TTGTCTTGATCAGTTGTGTA+AGG - chr2_2:69766488-69766507 None:intergenic 35.0%
AGACAAAACTACAAGTGCTA+TGG + chr2_2:69766502-69766521 Msa0267920:CDS 35.0%
TGAAAACTGCTTCTTCATCA+AGG + chr2_2:69766531-69766550 Msa0267920:CDS 35.0%
GAAAACTGCTTCTTCATCAA+GGG + chr2_2:69766532-69766551 Msa0267920:CDS 35.0%
AAAACTGCTTCTTCATCAAG+GGG + chr2_2:69766533-69766552 Msa0267920:CDS 35.0%
! GCTTTGCAAGATTTTAAGCT+TGG + chr2_2:69766620-69766639 Msa0267920:CDS 35.0%
!!! GGGGTTAATTTTGGTTTAGA+AGG + chr2_2:69766641-69766660 Msa0267920:CDS 35.0%
GCAAGGGATTAATAATCAAG+AGG + chr2_2:69766688-69766707 Msa0267920:CDS 35.0%
AACTGATGATCATCTACAAC+AGG - chr2_2:69766764-69766783 None:intergenic 35.0%
CAGCAACAAATTCCAAATAG+TGG + chr2_2:69766797-69766816 Msa0267920:CDS 35.0%
TGTTCAAACTCACCACTATT+TGG - chr2_2:69766812-69766831 None:intergenic 35.0%
CATCAGCAAAATAGAACTCA+AGG + chr2_2:69766830-69766849 Msa0267920:CDS 35.0%
! AAGGTGATTCTACTGGTTAT+TGG + chr2_2:69766849-69766868 Msa0267920:CDS 35.0%
! GATTCTACTGGTTATTGGAA+TGG + chr2_2:69766854-69766873 Msa0267920:CDS 35.0%
GGTTATTGGAATGGAATGTT+CGG + chr2_2:69766863-69766882 Msa0267920:CDS 35.0%
!!! AAGCTTTTGAGACTTGGAAT+TGG - chr2_2:69765426-69765445 None:intergenic 35.0%
!!! TGCATAAAGCTTTTGAGACT+TGG - chr2_2:69765432-69765451 None:intergenic 35.0%
AGGATCAGGAAAAGTAGTAA+AGG - chr2_2:69765741-69765760 None:intergenic 35.0%
!! GGATTGGTTAAACAAATGGA+TGG + chr2_2:69766008-69766027 Msa0267920:CDS 35.0%
! GCTTTTCTCTCTAACATAGA+AGG - chr2_2:69766059-69766078 None:intergenic 35.0%
CTATGTTAGAGAGAAAAGCA+AGG + chr2_2:69766060-69766079 Msa0267920:CDS 35.0%
!! ATCAAGCTTTAAACTGTCCA+AGG + chr2_2:69766093-69766112 Msa0267920:CDS 35.0%
!!! CAAGTTTTGCAAAAGTACCT+TGG - chr2_2:69766173-69766192 None:intergenic 35.0%
! GCAAAACTTGTAGAAGGTAT+TGG + chr2_2:69766183-69766202 Msa0267920:CDS 35.0%
TTAAGAAATGTTCCTGTAGG+TGG + chr2_2:69766221-69766240 Msa0267920:CDS 35.0%
TTGTCTTGATCAGTTGTGTA+AGG - chr2_2:69766488-69766507 None:intergenic 35.0%
AGACAAAACTACAAGTGCTA+TGG + chr2_2:69766502-69766521 Msa0267920:CDS 35.0%
TGAAAACTGCTTCTTCATCA+AGG + chr2_2:69766531-69766550 Msa0267920:CDS 35.0%
GAAAACTGCTTCTTCATCAA+GGG + chr2_2:69766532-69766551 Msa0267920:CDS 35.0%
AAAACTGCTTCTTCATCAAG+GGG + chr2_2:69766533-69766552 Msa0267920:CDS 35.0%
! GCTTTGCAAGATTTTAAGCT+TGG + chr2_2:69766620-69766639 Msa0267920:CDS 35.0%
!!! GGGGTTAATTTTGGTTTAGA+AGG + chr2_2:69766641-69766660 Msa0267920:CDS 35.0%
GCAAGGGATTAATAATCAAG+AGG + chr2_2:69766688-69766707 Msa0267920:CDS 35.0%
AACTGATGATCATCTACAAC+AGG - chr2_2:69766764-69766783 None:intergenic 35.0%
CAGCAACAAATTCCAAATAG+TGG + chr2_2:69766797-69766816 Msa0267920:CDS 35.0%
TGTTCAAACTCACCACTATT+TGG - chr2_2:69766812-69766831 None:intergenic 35.0%
CATCAGCAAAATAGAACTCA+AGG + chr2_2:69766830-69766849 Msa0267920:CDS 35.0%
! AAGGTGATTCTACTGGTTAT+TGG + chr2_2:69766849-69766868 Msa0267920:CDS 35.0%
! GATTCTACTGGTTATTGGAA+TGG + chr2_2:69766854-69766873 Msa0267920:CDS 35.0%
GGTTATTGGAATGGAATGTT+CGG + chr2_2:69766863-69766882 Msa0267920:CDS 35.0%
TCTTGGGAAAAAGAAAGGTG+TGG - chr2_2:69765850-69765869 None:intergenic 40.0%
! CTCTCTAACATAGAAGGTGT+TGG - chr2_2:69766053-69766072 None:intergenic 40.0%
GTGTTAGTTGAATTGCACCT+TGG - chr2_2:69766113-69766132 None:intergenic 40.0%
!! AAAAGTACCTTGGTTGTGAG+AGG - chr2_2:69766163-69766182 None:intergenic 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG + chr2_2:69766191-69766210 Msa0267920:CDS 40.0%
! GATTGAAGGTGATGATGATG+AGG - chr2_2:69766273-69766292 None:intergenic 40.0%
GGTTGTGATTGTGAGATTGA+AGG - chr2_2:69766287-69766306 None:intergenic 40.0%
! TTTTGTGCTGTAGCAAGATC+AGG - chr2_2:69766344-69766363 None:intergenic 40.0%
!!! GGTTTTGAGAAGCAGATTGA+GGG - chr2_2:69766373-69766392 None:intergenic 40.0%
CAAAACCCTAAGATCCATCA+AGG + chr2_2:69766386-69766405 Msa0267920:CDS 40.0%
! CTTGTCCTTGATGGATCTTA+GGG - chr2_2:69766394-69766413 None:intergenic 40.0%
! TCTTGTCCTTGATGGATCTT+AGG - chr2_2:69766395-69766414 None:intergenic 40.0%
GGTTAAGATCTTGTCCTTGA+TGG - chr2_2:69766403-69766422 None:intergenic 40.0%
!! TTGTTTGTGGTGGATAAGCT+AGG - chr2_2:69766424-69766443 None:intergenic 40.0%
TTATCCACCACAAACAACTG+AGG + chr2_2:69766427-69766446 Msa0267920:CDS 40.0%
TTATCCTCAGTTGTTTGTGG+TGG - chr2_2:69766434-69766453 None:intergenic 40.0%
CTAGACTCAGACAAAGTCAT+AGG - chr2_2:69766575-69766594 None:intergenic 40.0%
GGTTTAGAAGGGTTTGAGAA+TGG + chr2_2:69766653-69766672 Msa0267920:CDS 40.0%
GAAGGGTTTGAGAATGGTTA+TGG + chr2_2:69766659-69766678 Msa0267920:CDS 40.0%
AATAATCAAGAGGGTTCTGC+TGG + chr2_2:69766698-69766717 Msa0267920:CDS 40.0%
AGAACTCAAGGTGATTCTAC+TGG + chr2_2:69766842-69766861 Msa0267920:CDS 40.0%
TATTGGAATGGAATGTTCGG+TGG + chr2_2:69766866-69766885 Msa0267920:CDS 40.0%
TGGAGGATCATGGTAGATAA+TGG + chr2_2:69766886-69766905 Msa0267920:exon 40.0%
GAAAGTGATAAACAAGGGGT+TGG + chr2_2:69766931-69766950 Msa0267920:three_prime_UTR 40.0%
! GGGAGTGGAAGTTTGAAATT+TGG + chr2_2:69767047-69767066 Msa0267920:three_prime_UTR 40.0%
TCTTGGGAAAAAGAAAGGTG+TGG - chr2_2:69765850-69765869 None:intergenic 40.0%
! CTCTCTAACATAGAAGGTGT+TGG - chr2_2:69766053-69766072 None:intergenic 40.0%
GTGTTAGTTGAATTGCACCT+TGG - chr2_2:69766113-69766132 None:intergenic 40.0%
!! AAAAGTACCTTGGTTGTGAG+AGG - chr2_2:69766163-69766182 None:intergenic 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG + chr2_2:69766191-69766210 Msa0267920:CDS 40.0%
! GATTGAAGGTGATGATGATG+AGG - chr2_2:69766273-69766292 None:intergenic 40.0%
GGTTGTGATTGTGAGATTGA+AGG - chr2_2:69766287-69766306 None:intergenic 40.0%
! TTTTGTGCTGTAGCAAGATC+AGG - chr2_2:69766344-69766363 None:intergenic 40.0%
!!! GGTTTTGAGAAGCAGATTGA+GGG - chr2_2:69766373-69766392 None:intergenic 40.0%
CAAAACCCTAAGATCCATCA+AGG + chr2_2:69766386-69766405 Msa0267920:CDS 40.0%
! CTTGTCCTTGATGGATCTTA+GGG - chr2_2:69766394-69766413 None:intergenic 40.0%
! TCTTGTCCTTGATGGATCTT+AGG - chr2_2:69766395-69766414 None:intergenic 40.0%
GGTTAAGATCTTGTCCTTGA+TGG - chr2_2:69766403-69766422 None:intergenic 40.0%
!! TTGTTTGTGGTGGATAAGCT+AGG - chr2_2:69766424-69766443 None:intergenic 40.0%
TTATCCACCACAAACAACTG+AGG + chr2_2:69766427-69766446 Msa0267920:CDS 40.0%
TTATCCTCAGTTGTTTGTGG+TGG - chr2_2:69766434-69766453 None:intergenic 40.0%
CTAGACTCAGACAAAGTCAT+AGG - chr2_2:69766575-69766594 None:intergenic 40.0%
GGTTTAGAAGGGTTTGAGAA+TGG + chr2_2:69766653-69766672 Msa0267920:CDS 40.0%
GAAGGGTTTGAGAATGGTTA+TGG + chr2_2:69766659-69766678 Msa0267920:CDS 40.0%
AATAATCAAGAGGGTTCTGC+TGG + chr2_2:69766698-69766717 Msa0267920:CDS 40.0%
AGAACTCAAGGTGATTCTAC+TGG + chr2_2:69766842-69766861 Msa0267920:CDS 40.0%
TATTGGAATGGAATGTTCGG+TGG + chr2_2:69766866-69766885 Msa0267920:CDS 40.0%
TGGAGGATCATGGTAGATAA+TGG + chr2_2:69766886-69766905 Msa0267920:exon 40.0%
GAAAGTGATAAACAAGGGGT+TGG + chr2_2:69766931-69766950 Msa0267920:three_prime_UTR 40.0%
! GGGAGTGGAAGTTTGAAATT+TGG + chr2_2:69767047-69767066 Msa0267920:three_prime_UTR 40.0%
AATCTATGGACACAGCTCAG+TGG + chr2_2:69765553-69765572 Msa0267920:exon 45.0%
ATCTATGGACACAGCTCAGT+GGG + chr2_2:69765554-69765573 Msa0267920:exon 45.0%
ACTATAGCCTCTCACAACCA+AGG + chr2_2:69766153-69766172 Msa0267920:CDS 45.0%
!! AGAAGGTATTGGACTGAAGG+TGG + chr2_2:69766194-69766213 Msa0267920:CDS 45.0%
AGAAATGTTCCTGTAGGTGG+TGG + chr2_2:69766224-69766243 Msa0267920:CDS 45.0%
TTTCTTGAACCACCACCTAC+AGG - chr2_2:69766236-69766255 None:intergenic 45.0%
!!! GGGTTTTGAGAAGCAGATTG+AGG - chr2_2:69766374-69766393 None:intergenic 45.0%
GGGTTTGAGAATGGTTATGG+TGG + chr2_2:69766662-69766681 Msa0267920:CDS 45.0%
! AATGGTTATGGTGGCTTGCA+AGG + chr2_2:69766671-69766690 Msa0267920:CDS 45.0%
! ATGGTTATGGTGGCTTGCAA+GGG + chr2_2:69766672-69766691 Msa0267920:CDS 45.0%
AATCTATGGACACAGCTCAG+TGG + chr2_2:69765553-69765572 Msa0267920:exon 45.0%
ATCTATGGACACAGCTCAGT+GGG + chr2_2:69765554-69765573 Msa0267920:exon 45.0%
ACTATAGCCTCTCACAACCA+AGG + chr2_2:69766153-69766172 Msa0267920:CDS 45.0%
!! AGAAGGTATTGGACTGAAGG+TGG + chr2_2:69766194-69766213 Msa0267920:CDS 45.0%
AGAAATGTTCCTGTAGGTGG+TGG + chr2_2:69766224-69766243 Msa0267920:CDS 45.0%
TTTCTTGAACCACCACCTAC+AGG - chr2_2:69766236-69766255 None:intergenic 45.0%
!!! GGGTTTTGAGAAGCAGATTG+AGG - chr2_2:69766374-69766393 None:intergenic 45.0%
GGGTTTGAGAATGGTTATGG+TGG + chr2_2:69766662-69766681 Msa0267920:CDS 45.0%
! AATGGTTATGGTGGCTTGCA+AGG + chr2_2:69766671-69766690 Msa0267920:CDS 45.0%
! ATGGTTATGGTGGCTTGCAA+GGG + chr2_2:69766672-69766691 Msa0267920:CDS 45.0%
!!! TTATTATTTTTGAAAAATTT+AGG + chr2_2:69765977-69765996 Msa0267920:intron 5.0%
!!! TATTATTTTTGAAAAATTTA+GGG + chr2_2:69765978-69765997 Msa0267920:intron 5.0%
!!! TTATTATTTTTGAAAAATTT+AGG + chr2_2:69765977-69765996 Msa0267920:intron 5.0%
!!! TATTATTTTTGAAAAATTTA+GGG + chr2_2:69765978-69765997 Msa0267920:intron 5.0%
AATCAAGAGGGTTCTGCTGG+TGG + chr2_2:69766701-69766720 Msa0267920:CDS 50.0%
! TGGAATGGAATGTTCGGTGG+AGG + chr2_2:69766869-69766888 Msa0267920:CDS 50.0%
! GAATGTTCGGTGGAGGATCA+TGG + chr2_2:69766876-69766895 Msa0267920:CDS 50.0%
!!! CTTTTGGTAATGTGGGGGAG+TGG + chr2_2:69767032-69767051 Msa0267920:three_prime_UTR 50.0%
AATCAAGAGGGTTCTGCTGG+TGG + chr2_2:69766701-69766720 Msa0267920:CDS 50.0%
! TGGAATGGAATGTTCGGTGG+AGG + chr2_2:69766869-69766888 Msa0267920:CDS 50.0%
! GAATGTTCGGTGGAGGATCA+TGG + chr2_2:69766876-69766895 Msa0267920:CDS 50.0%
!!! CTTTTGGTAATGTGGGGGAG+TGG + chr2_2:69767032-69767051 Msa0267920:three_prime_UTR 50.0%
CAAGAGGGTTCTGCTGGTGG+TGG + chr2_2:69766704-69766723 Msa0267920:CDS 60.0%
CAAGAGGGTTCTGCTGGTGG+TGG + chr2_2:69766704-69766723 Msa0267920:CDS 60.0%
GGACACAGCTCAGTGGGCAC+AGG + chr2_2:69765560-69765579 Msa0267920:CDS 65.0%
!! GAGGGTTCTGCTGGTGGTGG+TGG + chr2_2:69766707-69766726 Msa0267920:CDS 65.0%
!! GGTTCTGCTGGTGGTGGTGG+TGG + chr2_2:69766710-69766729 Msa0267920:CDS 65.0%
!! TCTGCTGGTGGTGGTGGTGG+TGG + chr2_2:69766713-69766732 Msa0267920:CDS 65.0%
!! GTGGTGGTGGTGGTGGTGCA+AGG + chr2_2:69766729-69766748 Msa0267920:CDS 65.0%
GGACACAGCTCAGTGGGCAC+AGG + chr2_2:69765560-69765579 Msa0267920:CDS 65.0%
!! GAGGGTTCTGCTGGTGGTGG+TGG + chr2_2:69766707-69766726 Msa0267920:CDS 65.0%
!! GGTTCTGCTGGTGGTGGTGG+TGG + chr2_2:69766710-69766729 Msa0267920:CDS 65.0%
!! TCTGCTGGTGGTGGTGGTGG+TGG + chr2_2:69766713-69766732 Msa0267920:CDS 65.0%
!! GTGGTGGTGGTGGTGGTGCA+AGG + chr2_2:69766729-69766748 Msa0267920:CDS 65.0%
!! GCTGGTGGTGGTGGTGGTGG+TGG + chr2_2:69766716-69766735 Msa0267920:CDS 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG + chr2_2:69766719-69766738 Msa0267920:CDS 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG + chr2_2:69766719-69766738 Msa0267920:CDS 70.0%
!! GCTGGTGGTGGTGGTGGTGG+TGG + chr2_2:69766716-69766735 Msa0267920:CDS 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG + chr2_2:69766719-69766738 Msa0267920:CDS 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG + chr2_2:69766719-69766738 Msa0267920:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 69765405 69767233 69765405 ID=Msa0267920;Name=Msa0267920
chr2_2 mRNA 69765405 69767233 69765405 ID=Msa0267920-mRNA-1;Parent=Msa0267920;Name=Msa0267920-mRNA-1;_AED=0.00;_eAED=0.00;_QI=153|1|1|1|0|0|2|332|308
chr2_2 exon 69765405 69765581 69765405 ID=Msa0267920-mRNA-1:exon:22245;Parent=Msa0267920-mRNA-1
chr2_2 exon 69765999 69767233 69765999 ID=Msa0267920-mRNA-1:exon:22246;Parent=Msa0267920-mRNA-1
chr2_2 five_prime_UTR 69765405 69765557 69765405 ID=Msa0267920-mRNA-1:five_prime_utr;Parent=Msa0267920-mRNA-1
chr2_2 CDS 69765558 69765581 69765558 ID=Msa0267920-mRNA-1:cds;Parent=Msa0267920-mRNA-1
chr2_2 CDS 69765999 69766901 69765999 ID=Msa0267920-mRNA-1:cds;Parent=Msa0267920-mRNA-1
chr2_2 three_prime_UTR 69766902 69767233 69766902 ID=Msa0267920-mRNA-1:three_prime_utr;Parent=Msa0267920-mRNA-1
Gene Sequence

>Msa0267920

ATGGACACAGCTCAGTGGGCACAGGGGAATATTGGATTGGTTAAACAAATGGATGGATCAACTTCAAATTCAAAACCAACACCTTCTATGTTAGAGAGAAAAGCAAGGCCACAAAAAGATCAAGCTTTAAACTGTCCAAGGTGCAATTCAACTAACACAAAATTCTGTTACTACAATAACTATAGCCTCTCACAACCAAGGTACTTTTGCAAAACTTGTAGAAGGTATTGGACTGAAGGTGGTTCTTTAAGAAATGTTCCTGTAGGTGGTGGTTCAAGAAAAAACAAAAGATCAACCTCATCATCATCACCTTCAATCTCACAATCACAACCTCCATCATCAATAACAAAAAATATTATCATTAATCCTGATCTTGCTACAGCACAAAATAATTTCCCTCAATCTGCTTCTCAAAACCCTAAGATCCATCAAGGACAAGATCTTAACCTAGCTTATCCACCACAAACAACTGAGGATAATTATAATACCATATCTAAATTCATTGAGCTTCCTTACACAACTGATCAAGACAAAACTACAAGTGCTATGGAGCTTCTGAAAACTGCTTCTTCATCAAGGGGTTTGAATTCTTTTATGCCTATGACTTTGTCTGAGTCTAGTGCAATGTATAATTCAAGTGGTTTTGCTTTGCAAGATTTTAAGCTTGGGGTTAATTTTGGTTTAGAAGGGTTTGAGAATGGTTATGGTGGCTTGCAAGGGATTAATAATCAAGAGGGTTCTGCTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCAAGGATGTTGTTTCCTGTTGTAGATGATCATCAGTTGAATAATAAGCAGCAGCAACAAATTCCAAATAGTGGTGAGTTTGAACATCAGCAAAATAGAACTCAAGGTGATTCTACTGGTTATTGGAATGGAATGTTCGGTGGAGGATCATGGTAG

Protein sequence

>Msa0267920

MDTAQWAQGNIGLVKQMDGSTSNSKPTPSMLERKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSTSSSSPSISQSQPPSSITKNIIINPDLATAQNNFPQSASQNPKIHQGQDLNLAYPPQTTEDNYNTISKFIELPYTTDQDKTTSAMELLKTASSSRGLNSFMPMTLSESSAMYNSSGFALQDFKLGVNFGLEGFENGYGGLQGINNQEGSAGGGGGGGGGARMLFPVVDDHQLNNKQQQQIPNSGEFEHQQNRTQGDSTGYWNGMFGGGSW*