AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1250290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1250290 MtrunA17_Chr4g0054401 97.630 1055 24 1 1 1055 1 1054 0.0 2058
Msa1250290 MtrunA17_Chr7g0220961 31.400 793 503 10 48 824 44 811 5.32e-80 285
Msa1250290 MtrunA17_Chr6g0454711 29.306 836 548 6 12 838 51 852 7.59e-78 278
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1250290 AT5G65770.1 53.641 824 375 4 5 825 13 832 0.0 817
Msa1250290 AT5G65770.3 53.641 824 375 4 5 825 13 832 0.0 817
Msa1250290 AT5G65780.2 53.125 832 375 6 5 825 13 840 0.0 804
Msa1250290 AT5G65770.2 51.939 851 375 5 5 825 13 859 0.0 801
Msa1250290 AT1G67230.1 28.347 829 550 8 4 824 12 804 1.74e-70 256
Msa1250290 AT1G13220.3 28.970 825 553 8 11 823 54 857 6.61e-70 254
Msa1250290 AT1G13220.2 28.970 825 553 8 11 823 41 844 1.25e-69 254
Msa1250290 AT1G68790.1 27.690 762 519 5 2 762 24 754 3.24e-57 216
Msa1250290 AT1G13220.1 34.661 251 161 2 11 258 54 304 1.17e-37 146

Find 223 sgRNAs with CRISPR-Local

Find 414 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGGAGTCTTTGGCATCTT+TGG 0.205853 8_2:-45760782 Msa1250290:CDS
CGGCAAATGGGGTATTCTTT+TGG 0.206760 8_2:-45759560 Msa1250290:CDS
CCAACTCATGTTCCCTTTCC+AGG 0.223528 8_2:+45760971 None:intergenic
CATGTTCCCTTTCCAGGATT+TGG 0.226018 8_2:+45760977 None:intergenic
TCTTGTAAGATCTCAGAATT+TGG 0.229655 8_2:-45760653 Msa1250290:CDS
GACTGAAGAATTGAAGAAAT+TGG 0.231000 8_2:-45759975 Msa1250290:CDS
GTTATTTGTGTATAGATAAT+TGG 0.241032 8_2:-45758190 Msa1250290:three_prime_UTR
TTAGATATTACATATATATT+AGG 0.250015 8_2:-45758388 Msa1250290:three_prime_UTR
AGACTCCTGCAGATCTTTCT+TGG 0.253815 8_2:+45760795 None:intergenic
CAGCCCATTCTCGATTTCTT+AGG 0.255277 8_2:+45760095 None:intergenic
ATCTCAGAATTTGGAGCTAT+TGG 0.270107 8_2:-45760644 Msa1250290:CDS
GTATTATGTTGATGCTGTAC+TGG 0.289459 8_2:-45757784 Msa1250290:three_prime_UTR
TGTCAATTACTCCGAGTTCT+AGG 0.290991 8_2:-45764217 Msa1250290:CDS
TTTGAAGACGATCTAATTCC+TGG 0.294334 8_2:+45761603 None:intergenic
AAGCGAAACGCGATAAGTTT+AGG 0.295428 8_2:-45764296 Msa1250290:five_prime_UTR
GATAACAGGCACTCACTAAA+TGG 0.300038 8_2:-45761381 Msa1250290:intron
CTTCCCGCCTCTTCTCAATA+AGG 0.300382 8_2:+45760287 None:intergenic
TGCAATTGCAAATTGCAATT+AGG 0.310934 8_2:-45758135 Msa1250290:three_prime_UTR
GCCATTCGTTCTTCTGCTCT+TGG 0.314925 8_2:+45759338 None:intergenic
TGAGCGGACTGAGATAAATT+TGG 0.321576 8_2:-45760125 Msa1250290:CDS
TGAAATGCTTAAATCTGATA+TGG 0.322733 8_2:-45759915 Msa1250290:CDS
CATTACTACACGAGCTTCTT+CGG 0.324345 8_2:+45758782 None:intergenic
GAAAGATCTGCAGGAGTCTT+TGG 0.325327 8_2:-45760791 Msa1250290:CDS
TCATATGGGCCTTCTCATAT+TGG 0.331170 8_2:-45762534 Msa1250290:CDS
TTCAAATCCAGATTTGCTTT+TGG 0.332770 8_2:-45757974 Msa1250290:three_prime_UTR
CATTGTGCCAAAAGCAAATC+TGG 0.346603 8_2:+45757967 None:intergenic
CCTGATGACTTCTGCACAAA+TGG 0.349964 8_2:+45759770 None:intergenic
GCCTTGTGGTTCTAGTGTAT+TGG 0.363904 8_2:-45758628 Msa1250290:CDS
AAAGCGTGGTGCGCTTTATA+CGG 0.364587 8_2:-45764463 Msa1250290:five_prime_UTR
CCAGCATATTGATGCTCTTA+AGG 0.365197 8_2:-45760203 Msa1250290:CDS
TCTGTGCAGATTATCTTGAT+TGG 0.365535 8_2:+45758698 None:intergenic
ATCAACATCCACATCTTTGC+AGG 0.372268 8_2:+45759817 None:intergenic
GGAGAAAGCTGCAAAAGAAT+TGG 0.380847 8_2:-45760182 Msa1250290:CDS
CATATTGGAGAGGAAGGAAT+TGG 0.382576 8_2:-45762519 Msa1250290:CDS
AGAATTGGAACAGGTTTCCT+TGG 0.383621 8_2:-45760167 Msa1250290:CDS
ACCTGTTTCCGATTACTGTT+AGG 0.383846 8_2:-45758571 Msa1250290:intron
ACTCCTTCTCAGACGCTTTG+AGG 0.384043 8_2:+45760869 None:intergenic
CTGTGCAGATTATCTTGATT+GGG 0.384123 8_2:+45758699 None:intergenic
AACTCTTGAGTTTCTGTTGT+CGG 0.384140 8_2:+45757736 None:intergenic
GGTACTTCAACAATTACTTT+TGG 0.384732 8_2:+45759533 None:intergenic
TTTAGTAATGGACGGCAAAT+GGG 0.387030 8_2:-45759572 Msa1250290:CDS
TCTGTGACTAAAGATGTTAA+TGG 0.393938 8_2:-45759470 Msa1250290:CDS
TTGTACAGGGACTTTGGATG+TGG 0.394338 8_2:-45758426 Msa1250290:intron
TGTGAATACCTAACAGTAAT+CGG 0.401322 8_2:+45758563 None:intergenic
CTGGCTTTGTACAGGGACTT+TGG 0.403595 8_2:-45758432 Msa1250290:intron
TGAAGCAGAAAAGAAATTTA+CGG 0.407769 8_2:-45762055 Msa1250290:CDS
ATATGATCATCAACATCATA+TGG 0.413448 8_2:-45762549 Msa1250290:CDS
CTCCCACTCAACTTCAAACT+TGG 0.415131 8_2:+45760591 None:intergenic
CAATGCAGGATGTCATTTGT+TGG 0.415155 8_2:-45758226 Msa1250290:intron
CACAAAGTTTAAACTTGAAA+AGG 0.416010 8_2:-45761567 Msa1250290:CDS
GAGGTCATCCAAAGTGAAAC+AGG 0.416294 8_2:-45760718 Msa1250290:CDS
CTGTGACTAAAGATGTTAAT+GGG 0.418605 8_2:-45759469 Msa1250290:CDS
AACAGATCTGGAAACGGCTT+AGG 0.420234 8_2:-45764169 Msa1250290:CDS
TGTTGATGCTGTACTGGGCT+AGG 0.422310 8_2:-45757778 Msa1250290:three_prime_UTR
GTGGCTTCTGATACAAATAA+TGG 0.423209 8_2:-45759641 Msa1250290:CDS
GATAGTTAGAGACAACATAT+TGG 0.428980 8_2:-45758042 Msa1250290:three_prime_UTR
GAAAACCAGCCTACAACTAC+TGG 0.430253 8_2:-45761522 Msa1250290:CDS
CGACAAGCTAAGAGAAGAAA+AGG 0.433504 8_2:-45760476 Msa1250290:CDS
CACTTTCCGATGAACAGATC+TGG 0.434257 8_2:-45764181 Msa1250290:CDS
TGCTGATCCACTTGTAGATC+TGG 0.434812 8_2:-45759375 Msa1250290:CDS
GGCCTCCAGTAGTTGTAGGC+TGG 0.436397 8_2:+45761517 None:intergenic
GTGGCGTATCAGGAGAATTT+CGG 0.436754 8_2:+45759687 None:intergenic
ACCTAACAGTAATCGGAAAC+AGG 0.439212 8_2:+45758570 None:intergenic
ACCACAAGGCAAAATTTCTT+CGG 0.440283 8_2:+45758641 None:intergenic
AGCTGCAAAAGAATTGGAAC+AGG 0.440708 8_2:-45760176 Msa1250290:CDS
GGGGTTACTTGCTAGTGAAC+GGG 0.444606 8_2:-45760422 Msa1250290:CDS
CGGAGTAATTGACAGAGGTT+TGG 0.444619 8_2:+45764226 None:intergenic
GATGTCATTTGTTGGTGTGT+TGG 0.444798 8_2:-45758218 Msa1250290:three_prime_UTR
AGGTTTCCTTGGAGATGAAA+AGG 0.444918 8_2:-45760156 Msa1250290:CDS
CACCCTTACACAACAAGAAC+AGG 0.444990 8_2:-45761495 Msa1250290:intron
ACCAACAGAAAATATCTTCA+AGG 0.445161 8_2:-45759886 Msa1250290:CDS
AATTTGCAATTGCATCGATA+AGG 0.446834 8_2:+45758144 None:intergenic
GCGCTCATTCTTAATAAAAG+TGG 0.447106 8_2:+45760498 None:intergenic
TGGAAACGGCTTAGGGAGGC+TGG 0.447330 8_2:-45764161 Msa1250290:CDS
GGGTGGCCTCCAGTAGTTGT+AGG 0.448905 8_2:+45761513 None:intergenic
AAGTTTAGGATAATCGCGTT+TGG 0.449287 8_2:-45764282 Msa1250290:five_prime_UTR
CCATTTGTGCAGAAGTCATC+AGG 0.451956 8_2:-45759770 Msa1250290:CDS
GAACCTGTTCTTGTTGTGTA+AGG 0.453905 8_2:+45761492 None:intergenic
GTCAATTACTCCGAGTTCTA+GGG 0.454173 8_2:-45764216 Msa1250290:CDS
GTTGAAGTACCCTCTCTAGA+TGG 0.457116 8_2:-45759521 Msa1250290:CDS
TGGATGTGGGCATTGGTAGT+TGG 0.457695 8_2:-45758412 Msa1250290:three_prime_UTR
TGAGAAGAGGCGGGAAGAAG+TGG 0.459412 8_2:-45760281 Msa1250290:CDS
CATGAACATGCTGAGTGGTT+TGG 0.461814 8_2:-45760376 Msa1250290:CDS
GAATCTTTGAAGAAGACAAT+AGG 0.462052 8_2:-45762389 Msa1250290:CDS
TGATAACGCAAAGCAGAGAT+TGG 0.462406 8_2:-45760740 Msa1250290:CDS
GAGACGAGCTTGGGAATTGA+AGG 0.462973 8_2:-45761025 Msa1250290:CDS
ATCCCTTTCTGAAAGGCAAA+AGG 0.464632 8_2:-45761705 Msa1250290:CDS
CGTTAGCTGAATCAAGAAAA+CGG 0.465398 8_2:-45762415 Msa1250290:CDS
TACTTGGCGTTCTTCTGAAA+AGG 0.469382 8_2:+45759439 None:intergenic
CTAGTGCTGCTCGATTCTCC+TGG 0.471595 8_2:-45759736 Msa1250290:CDS
ACAAGTCGCCTGTTTCACTT+TGG 0.473180 8_2:+45760710 None:intergenic
TCAGAAGGCTATAGCAGATC+GGG 0.474987 8_2:-45761133 Msa1250290:CDS
TTAAAGAACTTGAGGTTCAA+AGG 0.475754 8_2:-45760057 Msa1250290:CDS
TCAGAGATTCAGCAGGTGTC+AGG 0.476485 8_2:-45758831 Msa1250290:CDS
TGCAAATTGCAATTAGGATG+AGG 0.477222 8_2:-45758129 Msa1250290:three_prime_UTR
TCACAAAATCATCAAGTGTT+CGG 0.481290 8_2:+45757903 None:intergenic
TAAAGAACTTGAGGTTCAAA+GGG 0.483210 8_2:-45760056 Msa1250290:CDS
GGAGGTTGATCTTAAACAAC+GGG 0.485407 8_2:-45761004 Msa1250290:CDS
AGAAGTGGAAAGTTATTTGA+AGG 0.485948 8_2:-45760266 Msa1250290:CDS
TAAACAGTACACCCATGACT+TGG 0.488917 8_2:-45760443 Msa1250290:CDS
GATACAAATAATGGTAGCAA+TGG 0.490045 8_2:-45759632 Msa1250290:CDS
TCGTGTAGTAATGGTTGATA+AGG 0.492161 8_2:-45758772 Msa1250290:CDS
AGCTAACGCAGATTTATTCG+TGG 0.493155 8_2:+45762430 None:intergenic
TAGGTAGTGGCCTGATCTAA+AGG 0.493923 8_2:+45759308 None:intergenic
GAATCTCTGATATATCTGAC+TGG 0.495750 8_2:+45758844 None:intergenic
CAAGTAGGCAGAGGGAAAAG+AGG 0.497312 8_2:-45759422 Msa1250290:CDS
GGGACTTTGGATGTGGGCAT+TGG 0.497607 8_2:-45758419 Msa1250290:three_prime_UTR
GGAAAATTTCATGAAGAAGA+TGG 0.499212 8_2:-45760401 Msa1250290:CDS
ATATATATTAGGAGTGTGTA+AGG 0.499589 8_2:-45758377 Msa1250290:intron
TTGAGACTAAGAGACGAGCT+TGG 0.500213 8_2:-45761035 Msa1250290:CDS
ATACAAATAATGGTAGCAAT+GGG 0.500523 8_2:-45759631 Msa1250290:CDS
TATTATGTTGATGCTGTACT+GGG 0.500683 8_2:-45757783 Msa1250290:three_prime_UTR
GAATTTGGAGCTATTGGCTG+AGG 0.501774 8_2:-45760638 Msa1250290:CDS
TAAGGTGTATATACAAAAGC+AGG 0.502182 8_2:+45758162 None:intergenic
TAGCAATGGGCAAAAGCACT+TGG 0.503709 8_2:-45759618 Msa1250290:CDS
TGAGGAATCGATTAAGCATA+AGG 0.503828 8_2:-45764132 Msa1250290:CDS
CGAAGAAGCTCGTGTAGTAA+TGG 0.505439 8_2:-45758781 Msa1250290:CDS
ACAACGGGAGGACCAAATCC+TGG 0.506111 8_2:-45760989 Msa1250290:CDS
TGAGACTAAGAGACGAGCTT+GGG 0.506442 8_2:-45761034 Msa1250290:CDS
GCTACAAATGCAGCGCAAAT+CGG 0.506734 8_2:-45761070 Msa1250290:CDS
GTTAGCTGAATCAAGAAAAC+GGG 0.507240 8_2:-45762414 Msa1250290:CDS
CCTTAAGAGCATCAATATGC+TGG 0.508753 8_2:+45760203 None:intergenic
CAGATCTGTTCATCGGAAAG+TGG 0.512701 8_2:+45764182 None:intergenic
GAGAATCGAGCAGCACTAGC+AGG 0.513330 8_2:+45759740 None:intergenic
CCTGGAAAGGGAACATGAGT+TGG 0.515780 8_2:-45760971 Msa1250290:CDS
GTGACCTAAGAAATCGAGAA+TGG 0.517616 8_2:-45760099 Msa1250290:CDS
AAACAGTACACCCATGACTT+GGG 0.521393 8_2:-45760442 Msa1250290:CDS
GGCCAAGTTTGAAGTTGAGT+GGG 0.523053 8_2:-45760593 Msa1250290:CDS
TAGCAAGTAACCCCAAGTCA+TGG 0.524802 8_2:+45760431 None:intergenic
TGGCGTTCTTCTGAAAAGGC+AGG 0.525277 8_2:+45759443 None:intergenic
TATTGCTAAGCTTGAAGCTG+AGG 0.526817 8_2:-45764087 Msa1250290:intron
TGTACAGGGACTTTGGATGT+GGG 0.531404 8_2:-45758425 Msa1250290:intron
CCGATGAACAGATCTGGAAA+CGG 0.532482 8_2:-45764175 Msa1250290:CDS
GTGGTTTGGCAAGATGCAGC+AGG 0.532962 8_2:-45760362 Msa1250290:CDS
CAGAATTTATAGAAAATGAA+AGG 0.535054 8_2:-45760531 Msa1250290:CDS
ATCCTCTCTTTGGTTGAGCG+AGG 0.535700 8_2:+45761643 None:intergenic
ACAGATCTGGAAACGGCTTA+GGG 0.536032 8_2:-45764168 Msa1250290:CDS
TAGATCAGGCCACTACCTAC+TGG 0.536314 8_2:-45759304 Msa1250290:intron
CTCAGAAGGCTATAGCAGAT+CGG 0.536943 8_2:-45761134 Msa1250290:CDS
TGGAGAACACAGAAGGAATA+CGG 0.537560 8_2:-45758608 Msa1250290:CDS
AACCTGTTCTTGTTGTGTAA+GGG 0.540669 8_2:+45761493 None:intergenic
TTGAAGACGATCTAATTCCT+GGG 0.540729 8_2:+45761604 None:intergenic
GTTTGTATATTTAAGCCTCA+AGG 0.540797 8_2:-45757716 Msa1250290:three_prime_UTR
TATGATCATCAACATCATAT+GGG 0.542963 8_2:-45762548 Msa1250290:CDS
AGGCCAAGTTTGAAGTTGAG+TGG 0.544846 8_2:-45760594 Msa1250290:CDS
CCTTCTCATATTGGAGAGGA+AGG 0.544902 8_2:-45762525 Msa1250290:CDS
ATTTATTCGTGGACAAATCA+CGG 0.548177 8_2:+45762441 None:intergenic
GGAGGACCAAATCCTGGAAA+GGG 0.552592 8_2:-45760983 Msa1250290:CDS
TGGGGTTACTTGCTAGTGAA+CGG 0.552616 8_2:-45760423 Msa1250290:CDS
ACAAGCCAAGAAAGATCTGC+AGG 0.553193 8_2:-45760800 Msa1250290:CDS
GCAAATTGCAATTAGGATGA+GGG 0.553275 8_2:-45758128 Msa1250290:three_prime_UTR
TGACCTAAGAAATCGAGAAT+GGG 0.556475 8_2:-45760098 Msa1250290:CDS
GAAGAACGCCAAGTAGGCAG+AGG 0.557769 8_2:-45759431 Msa1250290:CDS
TAAGCATTTCAACAATAGCA+AGG 0.563138 8_2:+45759927 None:intergenic
CTGTTCTTGTTGTGTAAGGG+TGG 0.565824 8_2:+45761496 None:intergenic
ATCGCGTTTGGAGTTTGCGA+TGG 0.566188 8_2:-45764270 Msa1250290:exon
TAATTGTATTAAAGAACTTG+AGG 0.568588 8_2:-45760065 Msa1250290:CDS
GATATAACAGTGTTGCAGAA+AGG 0.568859 8_2:-45761981 Msa1250290:CDS
AGATATATCAGAGATTCAGC+AGG 0.569147 8_2:-45758838 Msa1250290:CDS
CCGTTTCCAGATCTGTTCAT+CGG 0.569949 8_2:+45764175 None:intergenic
GATGTTGATAACATTGGCAA+TGG 0.570955 8_2:-45759803 Msa1250290:CDS
AGCAAGTAACCCCAAGTCAT+GGG 0.571896 8_2:+45760432 None:intergenic
ATTTATAGAAAATGAAAGGA+AGG 0.573898 8_2:-45760527 Msa1250290:CDS
ATAACCTTATTGAGAAGAGG+CGG 0.574080 8_2:-45760291 Msa1250290:CDS
ACCAAGAGCAGAAGAACGAA+TGG 0.574615 8_2:-45759339 Msa1250290:CDS
TGATAAGTTGAAAGCTGAGA+AGG 0.575127 8_2:-45760614 Msa1250290:CDS
GACAGAGGTTTGGCAGAGCT+AGG 0.577648 8_2:+45764236 None:intergenic
TAAATAACCTTATTGAGAAG+AGG 0.577808 8_2:-45760294 Msa1250290:CDS
TTCCGTACGCATCTCATGCA+AGG 0.577859 8_2:+45762137 None:intergenic
ATGTTGATAACATTGGCAAT+GGG 0.580067 8_2:-45759802 Msa1250290:CDS
GGGAGGACCAAATCCTGGAA+AGG 0.583998 8_2:-45760984 Msa1250290:CDS
TAACCTTATTGAGAAGAGGC+GGG 0.584991 8_2:-45760290 Msa1250290:CDS
CAAGATGCAGCAGGAGCGAG+CGG 0.585787 8_2:-45760353 Msa1250290:CDS
GCTAGCATTTCCATCTAGAG+AGG 0.589347 8_2:+45759511 None:intergenic
AAGCGCGTGAAGATATCCTC+AGG 0.590354 8_2:-45761942 Msa1250290:CDS
AGAGGCAATCCCTTTCTGAA+AGG 0.590940 8_2:-45761712 Msa1250290:CDS
AAATTTGTACCAGTAGGTAG+TGG 0.593396 8_2:+45759295 None:intergenic
AAGATATAATTTGCCGCCTG+AGG 0.593589 8_2:+45761926 None:intergenic
TACGGAATGTGCTGAAACAA+AGG 0.594764 8_2:-45762121 Msa1250290:CDS
ATCAAGATCACTGAGTGAGA+AGG 0.598320 8_2:-45760941 Msa1250290:CDS
GGCCTTGCATGAGATGCGTA+CGG 0.599729 8_2:-45762139 Msa1250290:CDS
CTTGAGTTCCTGCAAAGATG+TGG 0.599792 8_2:-45759825 Msa1250290:CDS
AAGCCTCAAAGCGTCTGAGA+AGG 0.599945 8_2:-45760872 Msa1250290:CDS
CTTCTCAAAACCCTAGAACT+CGG 0.600395 8_2:+45764206 None:intergenic
AATGTAGGATGAAACTCAGA+AGG 0.602666 8_2:-45761148 Msa1250290:intron
CCTTCCTCTCCAATATGAGA+AGG 0.606050 8_2:+45762525 None:intergenic
TAACGCAAAGCAGAGATTGG+AGG 0.607102 8_2:-45760737 Msa1250290:CDS
TTAGTAATGGACGGCAAATG+GGG 0.611813 8_2:-45759571 Msa1250290:CDS
GAAAGCAACAATCAAAACCA+TGG 0.612375 8_2:+45757994 None:intergenic
TAGGGAGGCTGGATTTGATG+AGG 0.612435 8_2:-45764150 Msa1250290:CDS
AATCTCTGATATATCTGACT+GGG 0.618522 8_2:+45758845 None:intergenic
AGGAGGTTGATCTTAAACAA+CGG 0.618769 8_2:-45761005 Msa1250290:CDS
AAGAACGCCAAGTAGGCAGA+GGG 0.620212 8_2:-45759430 Msa1250290:CDS
TTCTGCGCCAGATCTACAAG+TGG 0.621294 8_2:+45759368 None:intergenic
CTAGCATTTCCATCTAGAGA+GGG 0.627557 8_2:+45759512 None:intergenic
ATAAGGAGATGAATCTTGAG+AGG 0.627569 8_2:-45761730 Msa1250290:CDS
AACAGTACACCCATGACTTG+GGG 0.628762 8_2:-45760441 Msa1250290:CDS
ACGAGCTTGGGAATTGAAGG+AGG 0.629550 8_2:-45761022 Msa1250290:CDS
AATAAGTGCTGTGAGTGCGT+TGG 0.630124 8_2:+45764383 None:intergenic
GTATGAACATGTTAAAACCA+TGG 0.630158 8_2:-45762489 Msa1250290:CDS
AGTGTATTGGAGAACACAGA+AGG 0.633214 8_2:-45758615 Msa1250290:CDS
GAGCAGTTGACAGTTCCACT+AGG 0.641324 8_2:+45760911 None:intergenic
CATCTTTGCAGGAACTCAAG+CGG 0.649707 8_2:+45759828 None:intergenic
GGCGTCAAAGATGCATGCAT+AGG 0.650637 8_2:-45762368 Msa1250290:CDS
GATGTGGATGTTGATAACAT+TGG 0.656585 8_2:-45759809 Msa1250290:CDS
TGAGAAGGAGAAAGACCTAG+TGG 0.658465 8_2:-45760926 Msa1250290:CDS
GTTGGCGTGATTGATAGAAA+CGG 0.659703 8_2:+45764401 None:intergenic
TGGGCCTTCTCATATTGGAG+AGG 0.667331 8_2:-45762529 Msa1250290:CDS
AACCAGCCTACAACTACTGG+AGG 0.669577 8_2:-45761519 Msa1250290:CDS
ATCCTCGCTCAACCAAAGAG+AGG 0.673919 8_2:-45761645 Msa1250290:CDS
TAACTCAGATGACTCGACCA+TGG 0.674789 8_2:+45762472 None:intergenic
GGTTGATCTTAAACAACGGG+AGG 0.676677 8_2:-45761001 Msa1250290:CDS
GATCTGGAAACGGCTTAGGG+AGG 0.677230 8_2:-45764165 Msa1250290:CDS
TGAAAAGGCTTCAAACTGAG+CGG 0.688590 8_2:-45760141 Msa1250290:CDS
CATCAGACTCTTACACAAGG+TGG 0.692343 8_2:-45759851 Msa1250290:CDS
GAACTCGGAGTAATTGACAG+AGG 0.692990 8_2:+45764221 None:intergenic
CGCGTGAAGATATCCTCAGG+CGG 0.693321 8_2:-45761939 Msa1250290:CDS
AGCAGAAAAGAAATTTACGG+AGG 0.700844 8_2:-45762052 Msa1250290:CDS
AAGCATCAGACTCTTACACA+AGG 0.711698 8_2:-45759854 Msa1250290:CDS
CCATTACTAAAATTACCACG+TGG 0.725293 8_2:+45759584 None:intergenic
TCCAATACACTAGAACCACA+AGG 0.737093 8_2:+45758627 None:intergenic
TTGGAAAATGACAAGCCACG+TGG 0.744350 8_2:-45759599 Msa1250290:CDS
TGGCACATGAACATGCTGAG+TGG 0.773883 8_2:-45760381 Msa1250290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr8_2:45759862-45759881 None:intergenic 0.0%
!! TTATTATGATATTCAATTAA+AGG - chr8_2:45758951-45758970 Msa1250290:intron 10.0%
!! ATATTTAAAAATTCTAAGTT+GGG - chr8_2:45760709-45760728 Msa1250290:CDS 10.0%
!!! TGTTATTATTTTAATTTTGT+TGG - chr8_2:45760946-45760965 Msa1250290:CDS 10.0%
!!! TGTTATTATTTTAATTTTGT+TGG - chr8_2:45760946-45760965 Msa1250290:CDS 10.0%
!!! AAATTTATTTTTGAGAATAT+TGG - chr8_2:45763217-45763236 Msa1250290:intron 10.0%
!! TTAGATATTACATATATATT+AGG - chr8_2:45763790-45763809 Msa1250290:intron 10.0%
!! AATGTAACAAATATTATTGA+TGG - chr8_2:45758286-45758305 Msa1250290:intron 15.0%
!!! TATTGTTTTATAGTTAAGTT+TGG + chr8_2:45759238-45759257 None:intergenic 15.0%
!!! ATAAGAAAAATATATTTTGC+TGG + chr8_2:45759583-45759602 None:intergenic 15.0%
!! ATCAAAATTTATATCATTAC+AGG + chr8_2:45760359-45760378 None:intergenic 15.0%
!! CATATTTAAAAATTCTAAGT+TGG - chr8_2:45760708-45760727 Msa1250290:CDS 15.0%
!! TTAAAATAATAACAATACAG+AGG + chr8_2:45760940-45760959 None:intergenic 15.0%
!!! ATTATTTTAATTTTGTTGGA+TGG - chr8_2:45760950-45760969 Msa1250290:CDS 15.0%
!! TTAAAATAATAACAATACAG+AGG + chr8_2:45760940-45760959 None:intergenic 15.0%
!!! ATTATTTTAATTTTGTTGGA+TGG - chr8_2:45760950-45760969 Msa1250290:CDS 15.0%
!! CTTATGAATAATATATTACT+CGG + chr8_2:45763251-45763270 None:intergenic 15.0%
!! GATAAAGTTATAGAAATTTA+CGG + chr8_2:45763858-45763877 None:intergenic 15.0%
!!! AATATTATTGATGGCTTATA+TGG - chr8_2:45758295-45758314 Msa1250290:intron 20.0%
!! TTAAGAAAAATCTAGAGATA+CGG - chr8_2:45758523-45758542 Msa1250290:intron 20.0%
!! ATCAAATTTACACTTTAAAC+TGG - chr8_2:45758812-45758831 Msa1250290:CDS 20.0%
!!! TTTATTGATATTAGGGTTTT+GGG - chr8_2:45758873-45758892 Msa1250290:intron 20.0%
!! ATTGAATATCATAATAAGCA+TGG + chr8_2:45758948-45758967 None:intergenic 20.0%
!! ATTAACCTGTTAATGTTAAT+TGG - chr8_2:45759081-45759100 Msa1250290:intron 20.0%
!! ATTAACCAATTAACATTAAC+AGG + chr8_2:45759089-45759108 None:intergenic 20.0%
!! CATATTTAAGCAATTCAAAT+TGG - chr8_2:45759124-45759143 Msa1250290:intron 20.0%
!! GTGTGTATTATAGTTAAATT+TGG - chr8_2:45759194-45759213 Msa1250290:intron 20.0%
!! GAAAGAAAGAAAGAAAAAAT+TGG + chr8_2:45759975-45759994 None:intergenic 20.0%
!! AAAATTTATATCATTACAGG+TGG + chr8_2:45760356-45760375 None:intergenic 20.0%
!!! AATTTTTGAAGTGAAACTAA+AGG - chr8_2:45761492-45761511 Msa1250290:intron 20.0%
!! CAGAATTTATAGAAAATGAA+AGG - chr8_2:45761647-45761666 Msa1250290:CDS 20.0%
!! ATTTATAGAAAATGAAAGGA+AGG - chr8_2:45761651-45761670 Msa1250290:CDS 20.0%
!! TAATTGTATTAAAGAACTTG+AGG - chr8_2:45762113-45762132 Msa1250290:CDS 20.0%
!!! GTTAGCATATTTTTTTTACA+AGG - chr8_2:45762928-45762947 Msa1250290:intron 20.0%
!! TTAAAAAGTCATACAAATGA+TGG - chr8_2:45763048-45763067 Msa1250290:intron 20.0%
!! AATAAATTTGTAGATCTTTG+AGG + chr8_2:45763206-45763225 None:intergenic 20.0%
!! ATATTATTCATAAGTAGTCT+AGG - chr8_2:45763257-45763276 Msa1250290:intron 20.0%
!!! TTTATTGTAACTTCTTTTCT+AGG - chr8_2:45763654-45763673 Msa1250290:intron 20.0%
!! TTATCGAAGTAAAATTGATT+GGG + chr8_2:45763882-45763901 None:intergenic 20.0%
!! ATTATCGAAGTAAAATTGAT+TGG + chr8_2:45763883-45763902 None:intergenic 20.0%
!! GTTATTTGTGTATAGATAAT+TGG - chr8_2:45763988-45764007 Msa1250290:intron 20.0%
!!! TGAAATTTTAATCAGCTTCT+TGG + chr8_2:45757861-45757880 None:intergenic 25.0%
!!! AGTTTGAGTTGATTGAATTA+GGG - chr8_2:45758154-45758173 Msa1250290:three_prime_UTR 25.0%
!! TTTTACTTTGACATTGTTTG+TGG - chr8_2:45758198-45758217 Msa1250290:three_prime_UTR 25.0%
!! ATGGATTATTTGTGATGATT+CGG - chr8_2:45758314-45758333 Msa1250290:intron 25.0%
!! AGTTTCTCTTATAGTTTTCT+AGG + chr8_2:45758502-45758521 None:intergenic 25.0%
! TGTAAAAATGATAGATCATG+TGG - chr8_2:45758641-45758660 Msa1250290:CDS 25.0%
!!! TGAAACTTTAGAGTATTGAT+AGG - chr8_2:45758744-45758763 Msa1250290:CDS 25.0%
! GTATTCTATAAAAGGACAAA+TGG + chr8_2:45758787-45758806 None:intergenic 25.0%
!! TGTCCTTTTATAGAATACTT+TGG - chr8_2:45758789-45758808 Msa1250290:CDS 25.0%
!! GATCCAAAGTATTCTATAAA+AGG + chr8_2:45758795-45758814 None:intergenic 25.0%
! AGGTGAACTTTATTGATATT+AGG - chr8_2:45758865-45758884 Msa1250290:intron 25.0%
! GGTGAACTTTATTGATATTA+GGG - chr8_2:45758866-45758885 Msa1250290:intron 25.0%
!! CTTTATTGATATTAGGGTTT+TGG - chr8_2:45758872-45758891 Msa1250290:intron 25.0%
! TTAACTATAATACACACACA+TGG + chr8_2:45759191-45759210 None:intergenic 25.0%
! ATTTGAATCAAGAAGAGAAT+TGG + chr8_2:45759272-45759291 None:intergenic 25.0%
!!! GGTTATTTTTACAATACATG+TGG + chr8_2:45759363-45759382 None:intergenic 25.0%
! ACTTGAAAAGACAATTTGAT+TGG + chr8_2:45759490-45759509 None:intergenic 25.0%
! ATATGATCATCAACATCATA+TGG - chr8_2:45759629-45759648 Msa1250290:CDS 25.0%
! TATGATCATCAACATCATAT+GGG - chr8_2:45759630-45759649 Msa1250290:CDS 25.0%
! TGAAGCAGAAAAGAAATTTA+CGG - chr8_2:45760123-45760142 Msa1250290:CDS 25.0%
! CACAAAGTTTAAACTTGAAA+AGG - chr8_2:45760611-45760630 Msa1250290:CDS 25.0%
! ATGAAAAAAAAGAAGAGTTG+CGG - chr8_2:45761617-45761636 Msa1250290:CDS 25.0%
! TAAATAACCTTATTGAGAAG+AGG - chr8_2:45761884-45761903 Msa1250290:intron 25.0%
! TGAAATGCTTAAATCTGATA+TGG - chr8_2:45762263-45762282 Msa1250290:intron 25.0%
! ATACAAATAATGGTAGCAAT+GGG - chr8_2:45762547-45762566 Msa1250290:CDS 25.0%
! GTGCTTCAAATCATAAAAAA+GGG - chr8_2:45763369-45763388 Msa1250290:intron 25.0%
!! ATATATATTAGGAGTGTGTA+AGG - chr8_2:45763801-45763820 Msa1250290:intron 25.0%
! TATCGAAGTAAAATTGATTG+GGG + chr8_2:45763881-45763900 None:intergenic 25.0%
!!! TTTTATGAGTACTTTTTCCA+TGG - chr8_2:45764167-45764186 Msa1250290:CDS 25.0%
!!! GTGTTTGATTTGATTGTTTT+TGG - chr8_2:45764310-45764329 Msa1250290:five_prime_UTR 25.0%
! TTGTGTTCTTTTTGCTTTAG+GGG + chr8_2:45757821-45757840 None:intergenic 30.0%
! GTTGTGTTCTTTTTGCTTTA+GGG + chr8_2:45757822-45757841 None:intergenic 30.0%
! TGTTGTGTTCTTTTTGCTTT+AGG + chr8_2:45757823-45757842 None:intergenic 30.0%
!! GAGTTTGAGTTGATTGAATT+AGG - chr8_2:45758153-45758172 Msa1250290:three_prime_UTR 30.0%
!! GTTTGAGTTGATTGAATTAG+GGG - chr8_2:45758155-45758174 Msa1250290:three_prime_UTR 30.0%
GATTGAATTAGGGGATTAAT+AGG - chr8_2:45758164-45758183 Msa1250290:three_prime_UTR 30.0%
GACTTGTAGATTCTGTATAA+AGG - chr8_2:45758427-45758446 Msa1250290:intron 30.0%
AAGGAGAGTAGATTACATAA+AGG - chr8_2:45758446-45758465 Msa1250290:intron 30.0%
! TAAAGGTTAGTCAAATCACT+AGG - chr8_2:45758463-45758482 Msa1250290:intron 30.0%
CTATCTATGACTAACCTATA+AGG + chr8_2:45758673-45758692 None:intergenic 30.0%
TTTACACTTTAAACTGGTAG+TGG - chr8_2:45758818-45758837 Msa1250290:CDS 30.0%
ATATCATAATAAGCATGGAC+CGG + chr8_2:45758943-45758962 None:intergenic 30.0%
AAGGAAACTTGCAAAATTCT+TGG + chr8_2:45759022-45759041 None:intergenic 30.0%
ATTTGCAAAGTCAATTGAGT+TGG - chr8_2:45759408-45759427 Msa1250290:CDS 30.0%
AATTTGATTGGTGAAGGAAA+AGG + chr8_2:45759478-45759497 None:intergenic 30.0%
AAAGACAATTTGATTGGTGA+AGG + chr8_2:45759484-45759503 None:intergenic 30.0%
!! GGTTTTAACATGTTCATACT+TGG + chr8_2:45759688-45759707 None:intergenic 30.0%
GTATGAACATGTTAAAACCA+TGG - chr8_2:45759689-45759708 Msa1250290:CDS 30.0%
ATTTATTCGTGGACAAATCA+CGG + chr8_2:45759740-45759759 None:intergenic 30.0%
! GAATCTTTGAAGAAGACAAT+AGG - chr8_2:45759789-45759808 Msa1250290:CDS 30.0%
! AAAGGTTTTACAACAAGAAC+AGG - chr8_2:45760491-45760510 Msa1250290:CDS 30.0%
! TTTTACAACAAGAACAGGAA+AGG - chr8_2:45760496-45760515 Msa1250290:CDS 30.0%
TAAAAAGATGATCCTCTCTT+TGG + chr8_2:45760548-45760567 None:intergenic 30.0%
ATAAAAGAACCATTGACCAT+AGG + chr8_2:45760904-45760923 None:intergenic 30.0%
! TTTTGTTGGATGGAAAATGT+AGG - chr8_2:45761015-45761034 Msa1250290:CDS 30.0%
!!! ATGTTTTTTTGCTCTCATTG+TGG + chr8_2:45761074-45761093 None:intergenic 30.0%
! ATCTTTCTCCTTTTGCAAAA+GGG + chr8_2:45761350-45761369 None:intergenic 30.0%
TCTTGTAAGATCTCAGAATT+TGG - chr8_2:45761525-45761544 Msa1250290:CDS 30.0%
GGAAAATTTCATGAAGAAGA+TGG - chr8_2:45761777-45761796 Msa1250290:intron 30.0%
GGATATTGAGATGCAAAAAA+GGG - chr8_2:45761858-45761877 Msa1250290:intron 30.0%
AGAAGTGGAAAGTTATTTGA+AGG - chr8_2:45761912-45761931 Msa1250290:intron 30.0%
!! TTTTGAGGAAGAGAAGAATA+GGG - chr8_2:45761948-45761967 Msa1250290:CDS 30.0%
TTAAAGAACTTGAGGTTCAA+AGG - chr8_2:45762121-45762140 Msa1250290:CDS 30.0%
TAAAGAACTTGAGGTTCAAA+GGG - chr8_2:45762122-45762141 Msa1250290:CDS 30.0%
GACTGAAGAATTGAAGAAAT+TGG - chr8_2:45762203-45762222 Msa1250290:intron 30.0%
TAAGCATTTCAACAATAGCA+AGG + chr8_2:45762254-45762273 None:intergenic 30.0%
ACCAACAGAAAATATCTTCA+AGG - chr8_2:45762292-45762311 Msa1250290:intron 30.0%
! TCCTTGAAGATATTTTCTGT+TGG + chr8_2:45762296-45762315 None:intergenic 30.0%
!! ATGTTGATAACATTGGCAAT+GGG - chr8_2:45762376-45762395 Msa1250290:CDS 30.0%
!!! AAATTTCCTTTTTTCGTGAG+TGG + chr8_2:45762513-45762532 None:intergenic 30.0%
ACTCACGAAAAAAGGAAATT+TGG - chr8_2:45762512-45762531 Msa1250290:CDS 30.0%
GATACAAATAATGGTAGCAA+TGG - chr8_2:45762546-45762565 Msa1250290:CDS 30.0%
!! GTGGTAATTTTAGTAATGGA+CGG - chr8_2:45762598-45762617 Msa1250290:intron 30.0%
! GGTACTTCAACAATTACTTT+TGG + chr8_2:45762648-45762667 None:intergenic 30.0%
TCTGTGACTAAAGATGTTAA+TGG - chr8_2:45762708-45762727 Msa1250290:intron 30.0%
CTGTGACTAAAGATGTTAAT+GGG - chr8_2:45762709-45762728 Msa1250290:intron 30.0%
ACAAATAGTGTGTTTCAGTA+GGG + chr8_2:45762910-45762929 None:intergenic 30.0%
AACAAATAGTGTGTTTCAGT+AGG + chr8_2:45762911-45762930 None:intergenic 30.0%
!! TACAAATGATGGATTGTGAT+TGG - chr8_2:45763059-45763078 Msa1250290:intron 30.0%
AATCTCTGATATATCTGACT+GGG + chr8_2:45763336-45763355 None:intergenic 30.0%
GGTGCTTCAAATCATAAAAA+AGG - chr8_2:45763368-45763387 Msa1250290:intron 30.0%
TGTGAATACCTAACAGTAAT+CGG + chr8_2:45763618-45763637 None:intergenic 30.0%
ATCGAAGTAAAATTGATTGG+GGG + chr8_2:45763880-45763899 None:intergenic 30.0%
TAAGGTGTATATACAAAAGC+AGG + chr8_2:45764019-45764038 None:intergenic 30.0%
! AATTTGCAATTGCATCGATA+AGG + chr8_2:45764037-45764056 None:intergenic 30.0%
TGCAATTGCAAATTGCAATT+AGG - chr8_2:45764043-45764062 Msa1250290:intron 30.0%
GATAGTTAGAGACAACATAT+TGG - chr8_2:45764136-45764155 Msa1250290:CDS 30.0%
!! TTCAAATCCAGATTTGCTTT+TGG - chr8_2:45764204-45764223 Msa1250290:CDS 30.0%
TCACAAAATCATCAAGTGTT+CGG + chr8_2:45764278-45764297 None:intergenic 30.0%
!! AGCTCTTGTTTATATTTTGC+TGG - chr8_2:45764355-45764374 Msa1250290:five_prime_UTR 30.0%
TATTATGTTGATGCTGTACT+GGG - chr8_2:45764395-45764414 Msa1250290:five_prime_UTR 30.0%
GTTTGTATATTTAAGCCTCA+AGG - chr8_2:45764462-45764481 Msa1250290:five_prime_UTR 30.0%
GTGAGTAATCAAAAAAAGCG+TGG - chr8_2:45757743-45757762 Msa1250290:three_prime_UTR 35.0%
! AAGTTTAGGATAATCGCGTT+TGG - chr8_2:45757896-45757915 Msa1250290:three_prime_UTR 35.0%
TGAGGAATCGATTAAGCATA+AGG - chr8_2:45758046-45758065 Msa1250290:three_prime_UTR 35.0%
!! GGGGATTAATAGGTTTTATC+AGG - chr8_2:45758174-45758193 Msa1250290:three_prime_UTR 35.0%
ACTTTGACATTGTTTGTGGT+TGG - chr8_2:45758202-45758221 Msa1250290:three_prime_UTR 35.0%
! GATTATTTGTGATGATTCGG+TGG - chr8_2:45758317-45758336 Msa1250290:intron 35.0%
ATACGGTACATTTGTAAGAG+TGG - chr8_2:45758340-45758359 Msa1250290:intron 35.0%
TATAAAAGGACAAATGGCTG+CGG + chr8_2:45758781-45758800 None:intergenic 35.0%
TTGAAGCTATCACATTGAGT+AGG - chr8_2:45758900-45758919 Msa1250290:intron 35.0%
GAAGGATATATGCAATGAGA+GGG + chr8_2:45759169-45759188 None:intergenic 35.0%
CTATAATACACACACATGGA+AGG + chr8_2:45759187-45759206 None:intergenic 35.0%
ACAGTGACCATTCATGTTAT+TGG - chr8_2:45759555-45759574 Msa1250290:CDS 35.0%
CGTTAGCTGAATCAAGAAAA+CGG - chr8_2:45759763-45759782 Msa1250290:CDS 35.0%
GTTAGCTGAATCAAGAAAAC+GGG - chr8_2:45759764-45759783 Msa1250290:CDS 35.0%
!!! TTGCTTTTTGAAGCTTGAGA+AGG - chr8_2:45760018-45760037 Msa1250290:CDS 35.0%
AGCAGAAAAGAAATTTACGG+AGG - chr8_2:45760126-45760145 Msa1250290:CDS 35.0%
GATATAACAGTGTTGCAGAA+AGG - chr8_2:45760197-45760216 Msa1250290:CDS 35.0%
CAGCTGTGATGAAAAAGATA+AGG - chr8_2:45760431-45760450 Msa1250290:CDS 35.0%
ATAAGGAGATGAATCTTGAG+AGG - chr8_2:45760448-45760467 Msa1250290:CDS 35.0%
! AACCTTTTGCCTTTCAGAAA+GGG + chr8_2:45760478-45760497 None:intergenic 35.0%
! AAACCTTTTGCCTTTCAGAA+AGG + chr8_2:45760479-45760498 None:intergenic 35.0%
!! TCATCTTTTTAGTAGATCCC+AGG - chr8_2:45760557-45760576 Msa1250290:CDS 35.0%
TTGAAGACGATCTAATTCCT+GGG + chr8_2:45760577-45760596 None:intergenic 35.0%
TTTGAAGACGATCTAATTCC+TGG + chr8_2:45760578-45760597 None:intergenic 35.0%
AGATCGTCTTCAAAAAGAGT+TGG - chr8_2:45760584-45760603 Msa1250290:CDS 35.0%
! AACCTGTTCTTGTTGTGTAA+GGG + chr8_2:45760688-45760707 None:intergenic 35.0%
TTATCACAACACATATCCAC+GGG + chr8_2:45760782-45760801 None:intergenic 35.0%
GTTATCACAACACATATCCA+CGG + chr8_2:45760783-45760802 None:intergenic 35.0%
TGGATATGTGTTGTGATAAC+AGG - chr8_2:45760783-45760802 Msa1250290:CDS 35.0%
ATCTGTATGTTCTCTTCCTA+TGG - chr8_2:45760885-45760904 Msa1250290:CDS 35.0%
AATGTAGGATGAAACTCAGA+AGG - chr8_2:45761030-45761049 Msa1250290:CDS 35.0%
! AGGAGGTTGATCTTAAACAA+CGG - chr8_2:45761173-45761192 Msa1250290:intron 35.0%
! AAACACAACCCTTTTGCAAA+AGG - chr8_2:45761339-45761358 Msa1250290:CDS 35.0%
! CATCTTTCTCCTTTTGCAAA+AGG + chr8_2:45761351-45761370 None:intergenic 35.0%
! ATCTCAGAATTTGGAGCTAT+TGG - chr8_2:45761534-45761553 Msa1250290:CDS 35.0%
! TGATAAGTTGAAAGCTGAGA+AGG - chr8_2:45761564-45761583 Msa1250290:CDS 35.0%
GCGCTCATTCTTAATAAAAG+TGG + chr8_2:45761683-45761702 None:intergenic 35.0%
GGGATATTGAGATGCAAAAA+AGG - chr8_2:45761857-45761876 Msa1250290:intron 35.0%
ATAACCTTATTGAGAAGAGG+CGG - chr8_2:45761887-45761906 Msa1250290:intron 35.0%
!! CTTTTGAGGAAGAGAAGAAT+AGG - chr8_2:45761947-45761966 Msa1250290:CDS 35.0%
TGACCTAAGAAATCGAGAAT+GGG - chr8_2:45762080-45762099 Msa1250290:CDS 35.0%
!! GATGTGGATGTTGATAACAT+TGG - chr8_2:45762369-45762388 Msa1250290:CDS 35.0%
!! GATGTTGATAACATTGGCAA+TGG - chr8_2:45762375-45762394 Msa1250290:CDS 35.0%
GAAAAAAGGAAATTTGGCTG+TGG - chr8_2:45762518-45762537 Msa1250290:CDS 35.0%
GTGGCTTCTGATACAAATAA+TGG - chr8_2:45762537-45762556 Msa1250290:CDS 35.0%
CCATTACTAAAATTACCACG+TGG + chr8_2:45762597-45762616 None:intergenic 35.0%
!! CCACGTGGTAATTTTAGTAA+TGG - chr8_2:45762594-45762613 Msa1250290:intron 35.0%
!!! TTTTAGTAATGGACGGCAAA+TGG - chr8_2:45762605-45762624 Msa1250290:intron 35.0%
!! TTTAGTAATGGACGGCAAAT+GGG - chr8_2:45762606-45762625 Msa1250290:intron 35.0%
AAATTTGTACCAGTAGGTAG+TGG + chr8_2:45762886-45762905 None:intergenic 35.0%
TAAGTAGTCTAGGTGTAGTA+TGG - chr8_2:45763267-45763286 Msa1250290:intron 35.0%
GAATCTCTGATATATCTGAC+TGG + chr8_2:45763337-45763356 None:intergenic 35.0%
AGATATATCAGAGATTCAGC+AGG - chr8_2:45763340-45763359 Msa1250290:intron 35.0%
! TCGTGTAGTAATGGTTGATA+AGG - chr8_2:45763406-45763425 Msa1250290:intron 35.0%
CTGTGCAGATTATCTTGATT+GGG + chr8_2:45763482-45763501 None:intergenic 35.0%
TCTGTGCAGATTATCTTGAT+TGG + chr8_2:45763483-45763502 None:intergenic 35.0%
ACCACAAGGCAAAATTTCTT+CGG + chr8_2:45763540-45763559 None:intergenic 35.0%
! TGTAACTTCTTTTCTAGGCT+AGG - chr8_2:45763659-45763678 Msa1250290:intron 35.0%
! ATGTTCTTTTCTTGCAATGC+AGG - chr8_2:45763938-45763957 Msa1250290:intron 35.0%
TGCAAATTGCAATTAGGATG+AGG - chr8_2:45764049-45764068 Msa1250290:intron 35.0%
GCAAATTGCAATTAGGATGA+GGG - chr8_2:45764050-45764069 Msa1250290:intron 35.0%
GAAAGCAACAATCAAAACCA+TGG + chr8_2:45764187-45764206 None:intergenic 35.0%
GTATTATGTTGATGCTGTAC+TGG - chr8_2:45764394-45764413 Msa1250290:five_prime_UTR 35.0%
AACTCTTGAGTTTCTGTTGT+CGG + chr8_2:45764445-45764464 None:intergenic 35.0%
GTTGGCGTGATTGATAGAAA+CGG + chr8_2:45757780-45757799 None:intergenic 40.0%
AAGCGAAACGCGATAAGTTT+AGG - chr8_2:45757882-45757901 Msa1250290:three_prime_UTR 40.0%
TGTCAATTACTCCGAGTTCT+AGG - chr8_2:45757961-45757980 Msa1250290:three_prime_UTR 40.0%
GTCAATTACTCCGAGTTCTA+GGG - chr8_2:45757962-45757981 Msa1250290:three_prime_UTR 40.0%
CTTCTCAAAACCCTAGAACT+CGG + chr8_2:45757975-45757994 None:intergenic 40.0%
TATTGCTAAGCTTGAAGCTG+AGG - chr8_2:45758091-45758110 Msa1250290:three_prime_UTR 40.0%
!! TTGTGATGATTCGGTGGATA+CGG - chr8_2:45758323-45758342 Msa1250290:intron 40.0%
! TGTAAGAGTGGTGATGTTGT+TGG - chr8_2:45758352-45758371 Msa1250290:intron 40.0%
! GTAAGAGTGGTGATGTTGTT+GGG - chr8_2:45758353-45758372 Msa1250290:intron 40.0%
! AGGTTAGTCAAATCACTAGG+AGG - chr8_2:45758466-45758485 Msa1250290:intron 40.0%
AAAATCTAGAGATACGGAGC+TGG - chr8_2:45758529-45758548 Msa1250290:intron 40.0%
! TTGTAGTGGAATGCAGCTAT+AGG - chr8_2:45758845-45758864 Msa1250290:CDS 40.0%
GGACTTTACCTAATCAGTTC+CGG - chr8_2:45758921-45758940 Msa1250290:intron 40.0%
TGATCATTGCGCAAATGACA+AGG + chr8_2:45759041-45759060 None:intergenic 40.0%
GGAAGGATATATGCAATGAG+AGG + chr8_2:45759170-45759189 None:intergenic 40.0%
TGAACTGACCATGAAAGCTA+AGG + chr8_2:45759389-45759408 None:intergenic 40.0%
TCATATGGGCCTTCTCATAT+TGG - chr8_2:45759644-45759663 Msa1250290:CDS 40.0%
CATATTGGAGAGGAAGGAAT+TGG - chr8_2:45759659-45759678 Msa1250290:CDS 40.0%
AGCTAACGCAGATTTATTCG+TGG + chr8_2:45759751-45759770 None:intergenic 40.0%
TACGGAATGTGCTGAAACAA+AGG - chr8_2:45760057-45760076 Msa1250290:CDS 40.0%
! AAGATATAATTTGCCGCCTG+AGG + chr8_2:45760255-45760274 None:intergenic 40.0%
! ATCCCTTTCTGAAAGGCAAA+AGG - chr8_2:45760473-45760492 Msa1250290:CDS 40.0%
TCGTCTTCAAAAAGAGTTGG+AGG - chr8_2:45760587-45760606 Msa1250290:CDS 40.0%
! GAACCTGTTCTTGTTGTGTA+AGG + chr8_2:45760689-45760708 None:intergenic 40.0%
GATAACAGGCACTCACTAAA+TGG - chr8_2:45760797-45760816 Msa1250290:CDS 40.0%
TGTTCTCTTCCTATGGTCAA+TGG - chr8_2:45760892-45760911 Msa1250290:CDS 40.0%
! GGAGGTTGATCTTAAACAAC+GGG - chr8_2:45761174-45761193 Msa1250290:intron 40.0%
ATCAAGATCACTGAGTGAGA+AGG - chr8_2:45761237-45761256 Msa1250290:intron 40.0%
! TGATAACGCAAAGCAGAGAT+TGG - chr8_2:45761438-45761457 Msa1250290:intron 40.0%
TAAACAGTACACCCATGACT+TGG - chr8_2:45761735-45761754 Msa1250290:CDS 40.0%
AAACAGTACACCCATGACTT+GGG - chr8_2:45761736-45761755 Msa1250290:CDS 40.0%
TAACCTTATTGAGAAGAGGC+GGG - chr8_2:45761888-45761907 Msa1250290:intron 40.0%
! GGAAAGAGAAACAGCTTTTG+AGG - chr8_2:45761933-45761952 Msa1250290:CDS 40.0%
!! CCTTAAGAGCATCAATATGC+TGG + chr8_2:45761978-45761997 None:intergenic 40.0%
CCAGCATATTGATGCTCTTA+AGG - chr8_2:45761975-45761994 Msa1250290:CDS 40.0%
GGAGAAAGCTGCAAAAGAAT+TGG - chr8_2:45761996-45762015 Msa1250290:CDS 40.0%
AGCTGCAAAAGAATTGGAAC+AGG - chr8_2:45762002-45762021 Msa1250290:CDS 40.0%
AGAATTGGAACAGGTTTCCT+TGG - chr8_2:45762011-45762030 Msa1250290:CDS 40.0%
AGGTTTCCTTGGAGATGAAA+AGG - chr8_2:45762022-45762041 Msa1250290:CDS 40.0%
! TTGAAGCCTTTTCATCTCCA+AGG + chr8_2:45762031-45762050 None:intergenic 40.0%
TGAAAAGGCTTCAAACTGAG+CGG - chr8_2:45762037-45762056 Msa1250290:CDS 40.0%
!! TGAGCGGACTGAGATAAATT+TGG - chr8_2:45762053-45762072 Msa1250290:CDS 40.0%
GTGACCTAAGAAATCGAGAA+TGG - chr8_2:45762079-45762098 Msa1250290:CDS 40.0%
AAGCATCAGACTCTTACACA+AGG - chr8_2:45762324-45762343 Msa1250290:intron 40.0%
ATCAACATCCACATCTTTGC+AGG + chr8_2:45762364-45762383 None:intergenic 40.0%
!! TTAGTAATGGACGGCAAATG+GGG - chr8_2:45762607-45762626 Msa1250290:intron 40.0%
CTAGCATTTCCATCTAGAGA+GGG + chr8_2:45762669-45762688 None:intergenic 40.0%
! TACTTGGCGTTCTTCTGAAA+AGG + chr8_2:45762742-45762761 None:intergenic 40.0%
! TTTTCAGAAGAACGCCAAGT+AGG - chr8_2:45762741-45762760 Msa1250290:intron 40.0%
GGCCAAAAATCCTTTAGATC+AGG - chr8_2:45762860-45762879 Msa1250290:intron 40.0%
! GGCCTGATCTAAAGGATTTT+TGG + chr8_2:45762865-45762884 None:intergenic 40.0%
TAGGGCAAATTTGTACCAGT+AGG + chr8_2:45762892-45762911 None:intergenic 40.0%
! TAAGCCAATGAAAGCACAAG+TGG - chr8_2:45763168-45763187 Msa1250290:intron 40.0%
CATTACTACACGAGCTTCTT+CGG + chr8_2:45763399-45763418 None:intergenic 40.0%
! TCCGAAGAAATTTTGCCTTG+TGG - chr8_2:45763536-45763555 Msa1250290:intron 40.0%
TCCAATACACTAGAACCACA+AGG + chr8_2:45763554-45763573 None:intergenic 40.0%
AGTGTATTGGAGAACACAGA+AGG - chr8_2:45763563-45763582 Msa1250290:intron 40.0%
TGGAGAACACAGAAGGAATA+CGG - chr8_2:45763570-45763589 Msa1250290:intron 40.0%
ACCTGTTTCCGATTACTGTT+AGG - chr8_2:45763607-45763626 Msa1250290:intron 40.0%
ACCTAACAGTAATCGGAAAC+AGG + chr8_2:45763611-45763630 None:intergenic 40.0%
AGCCAGCATTAAGTTATGAG+CGG + chr8_2:45763732-45763751 None:intergenic 40.0%
!! ACTTAATGCTGGCTTTGTAC+AGG - chr8_2:45763738-45763757 Msa1250290:intron 40.0%
!! CTTAATGCTGGCTTTGTACA+GGG - chr8_2:45763739-45763758 Msa1250290:intron 40.0%
! CAATGCAGGATGTCATTTGT+TGG - chr8_2:45763952-45763971 Msa1250290:intron 40.0%
! GATGTCATTTGTTGGTGTGT+TGG - chr8_2:45763960-45763979 Msa1250290:intron 40.0%
CATTGTGCCAAAAGCAAATC+TGG + chr8_2:45764214-45764233 None:intergenic 40.0%
!! ATTTGCTTTTGGCACAATGC+TGG - chr8_2:45764215-45764234 Msa1250290:CDS 40.0%
!! TTTGCTTTTGGCACAATGCT+GGG - chr8_2:45764216-45764235 Msa1250290:CDS 40.0%
AAAGCGTGGTGCGCTTTATA+CGG - chr8_2:45757715-45757734 Msa1250290:three_prime_UTR 45.0%
! AATAAGTGCTGTGAGTGCGT+TGG + chr8_2:45757798-45757817 None:intergenic 45.0%
CGGAGTAATTGACAGAGGTT+TGG + chr8_2:45757955-45757974 None:intergenic 45.0%
GAACTCGGAGTAATTGACAG+AGG + chr8_2:45757960-45757979 None:intergenic 45.0%
CAGATCTGTTCATCGGAAAG+TGG + chr8_2:45757999-45758018 None:intergenic 45.0%
CACTTTCCGATGAACAGATC+TGG - chr8_2:45757997-45758016 Msa1250290:three_prime_UTR 45.0%
CCGTTTCCAGATCTGTTCAT+CGG + chr8_2:45758006-45758025 None:intergenic 45.0%
CCGATGAACAGATCTGGAAA+CGG - chr8_2:45758003-45758022 Msa1250290:three_prime_UTR 45.0%
AACAGATCTGGAAACGGCTT+AGG - chr8_2:45758009-45758028 Msa1250290:three_prime_UTR 45.0%
ACAGATCTGGAAACGGCTTA+GGG - chr8_2:45758010-45758029 Msa1250290:three_prime_UTR 45.0%
ATGTTGTTGGGCCGTAAAGA+CGG - chr8_2:45758365-45758384 Msa1250290:intron 45.0%
!! GAACTCGGCATTGGTTGTTT+GGG - chr8_2:45758391-45758410 Msa1250290:three_prime_UTR 45.0%
ACTTAGTGAGGTCGGCTAAA+TGG + chr8_2:45758591-45758610 None:intergenic 45.0%
ATTTAGCCGACCTCACTAAG+TGG - chr8_2:45758590-45758609 Msa1250290:CDS 45.0%
TTTAGCCGACCTCACTAAGT+GGG - chr8_2:45758591-45758610 Msa1250290:CDS 45.0%
AAGTCTTACCCCACTTAGTG+AGG + chr8_2:45758603-45758622 None:intergenic 45.0%
TCATGTGGCGTGTTCCTTAT+AGG - chr8_2:45758656-45758675 Msa1250290:CDS 45.0%
!! AGAGTATTGATAGGTGCCTG+TGG - chr8_2:45758753-45758772 Msa1250290:CDS 45.0%
!! CTGGTAGTGGTTGATTGTAG+TGG - chr8_2:45758831-45758850 Msa1250290:CDS 45.0%
! GCACAGTGATTCGTGTTGAT+CGG - chr8_2:45759309-45759328 Msa1250290:CDS 45.0%
! TAACCACGCCTTAGCTTTCA+TGG - chr8_2:45759378-45759397 Msa1250290:CDS 45.0%
GCTGGCACCAATAACATGAA+TGG + chr8_2:45759565-45759584 None:intergenic 45.0%
CCTTCCTCTCCAATATGAGA+AGG + chr8_2:45759656-45759675 None:intergenic 45.0%
CCTTCTCATATTGGAGAGGA+AGG - chr8_2:45759653-45759672 Msa1250290:CDS 45.0%
TAACTCAGATGACTCGACCA+TGG + chr8_2:45759709-45759728 None:intergenic 45.0%
TAAAGATCACTCGCTTGCTC+AGG + chr8_2:45760332-45760351 None:intergenic 45.0%
TTCATCACAGCTGTGAGAGA+CGG + chr8_2:45760424-45760443 None:intergenic 45.0%
AGAGGCAATCCCTTTCTGAA+AGG - chr8_2:45760466-45760485 Msa1250290:CDS 45.0%
!!! GCTGGTTTTCTTGTCATGGA+GGG + chr8_2:45760646-45760665 None:intergenic 45.0%
!!! GTAGGCTGGTTTTCTTGTCA+TGG + chr8_2:45760650-45760669 None:intergenic 45.0%
GAAAACCAGCCTACAACTAC+TGG - chr8_2:45760656-45760675 Msa1250290:CDS 45.0%
! CTGTTCTTGTTGTGTAAGGG+TGG + chr8_2:45760685-45760704 None:intergenic 45.0%
CACCCTTACACAACAAGAAC+AGG - chr8_2:45760683-45760702 Msa1250290:CDS 45.0%
! ATTTCTGTCTTGTTCACCCG+TGG - chr8_2:45760763-45760782 Msa1250290:CDS 45.0%
CTCAGAAGGCTATAGCAGAT+CGG - chr8_2:45761044-45761063 Msa1250290:CDS 45.0%
TCAGAAGGCTATAGCAGATC+GGG - chr8_2:45761045-45761064 Msa1250290:CDS 45.0%
GCTACAAATGCAGCGCAAAT+CGG - chr8_2:45761108-45761127 Msa1250290:CDS 45.0%
TTGAGACTAAGAGACGAGCT+TGG - chr8_2:45761143-45761162 Msa1250290:CDS 45.0%
TGAGACTAAGAGACGAGCTT+GGG - chr8_2:45761144-45761163 Msa1250290:CDS 45.0%
GGTTGATCTTAAACAACGGG+AGG - chr8_2:45761177-45761196 Msa1250290:intron 45.0%
CATGTTCCCTTTCCAGGATT+TGG + chr8_2:45761204-45761223 None:intergenic 45.0%
TGAGAAGGAGAAAGACCTAG+TGG - chr8_2:45761252-45761271 Msa1250290:intron 45.0%
ACAAGCCAAGAAAGATCTGC+AGG - chr8_2:45761378-45761397 Msa1250290:intron 45.0%
AGACTCCTGCAGATCTTTCT+TGG + chr8_2:45761386-45761405 None:intergenic 45.0%
GAAAGATCTGCAGGAGTCTT+TGG - chr8_2:45761387-45761406 Msa1250290:intron 45.0%
TAACGCAAAGCAGAGATTGG+AGG - chr8_2:45761441-45761460 Msa1250290:intron 45.0%
GAGGTCATCCAAAGTGAAAC+AGG - chr8_2:45761460-45761479 Msa1250290:intron 45.0%
ACAAGTCGCCTGTTTCACTT+TGG + chr8_2:45761471-45761490 None:intergenic 45.0%
! GAATTTGGAGCTATTGGCTG+AGG - chr8_2:45761540-45761559 Msa1250290:CDS 45.0%
! AGGCCAAGTTTGAAGTTGAG+TGG - chr8_2:45761584-45761603 Msa1250290:CDS 45.0%
! GGCCAAGTTTGAAGTTGAGT+GGG - chr8_2:45761585-45761604 Msa1250290:CDS 45.0%
CTCCCACTCAACTTCAAACT+TGG + chr8_2:45761590-45761609 None:intergenic 45.0%
AACAGTACACCCATGACTTG+GGG - chr8_2:45761737-45761756 Msa1250290:CDS 45.0%
AGCAAGTAACCCCAAGTCAT+GGG + chr8_2:45761749-45761768 None:intergenic 45.0%
TAGCAAGTAACCCCAAGTCA+TGG + chr8_2:45761750-45761769 None:intergenic 45.0%
! TGGGGTTACTTGCTAGTGAA+CGG - chr8_2:45761755-45761774 Msa1250290:intron 45.0%
CATGAACATGCTGAGTGGTT+TGG - chr8_2:45761802-45761821 Msa1250290:intron 45.0%
CAGCCCATTCTCGATTTCTT+AGG + chr8_2:45762086-45762105 None:intergenic 45.0%
CATCAGACTCTTACACAAGG+TGG - chr8_2:45762327-45762346 Msa1250290:intron 45.0%
CATCTTTGCAGGAACTCAAG+CGG + chr8_2:45762353-45762372 None:intergenic 45.0%
CTTGAGTTCCTGCAAAGATG+TGG - chr8_2:45762353-45762372 Msa1250290:intron 45.0%
CCTGATGACTTCTGCACAAA+TGG + chr8_2:45762411-45762430 None:intergenic 45.0%
CCATTTGTGCAGAAGTCATC+AGG - chr8_2:45762408-45762427 Msa1250290:CDS 45.0%
! CTCTGTGCATCGTTTTATCC+AGG + chr8_2:45762463-45762482 None:intergenic 45.0%
GTGGCGTATCAGGAGAATTT+CGG + chr8_2:45762494-45762513 None:intergenic 45.0%
! TTTTTCGTGAGTGGCGTATC+AGG + chr8_2:45762504-45762523 None:intergenic 45.0%
GATACGCCACTCACGAAAAA+AGG - chr8_2:45762504-45762523 Msa1250290:CDS 45.0%
!! TAGCAATGGGCAAAAGCACT+TGG - chr8_2:45762560-45762579 Msa1250290:intron 45.0%
TTGGAAAATGACAAGCCACG+TGG - chr8_2:45762579-45762598 Msa1250290:intron 45.0%
!! CGGCAAATGGGGTATTCTTT+TGG - chr8_2:45762618-45762637 Msa1250290:intron 45.0%
! GTTGAAGTACCCTCTCTAGA+TGG - chr8_2:45762657-45762676 Msa1250290:intron 45.0%
GCTAGCATTTCCATCTAGAG+AGG + chr8_2:45762670-45762689 None:intergenic 45.0%
TGCTGATCCACTTGTAGATC+TGG - chr8_2:45762803-45762822 Msa1250290:intron 45.0%
ACCAAGAGCAGAAGAACGAA+TGG - chr8_2:45762839-45762858 Msa1250290:intron 45.0%
! TAGGTAGTGGCCTGATCTAA+AGG + chr8_2:45762873-45762892 None:intergenic 45.0%
AGCACCACTTGTGCTTTCAT+TGG + chr8_2:45763175-45763194 None:intergenic 45.0%
CGAAGAAGCTCGTGTAGTAA+TGG - chr8_2:45763397-45763416 Msa1250290:intron 45.0%
!! GCCTTGTGGTTCTAGTGTAT+TGG - chr8_2:45763550-45763569 Msa1250290:intron 45.0%
CTCCGCTCATAACTTAATGC+TGG - chr8_2:45763727-45763746 Msa1250290:intron 45.0%
TTGTACAGGGACTTTGGATG+TGG - chr8_2:45763752-45763771 Msa1250290:intron 45.0%
TGTACAGGGACTTTGGATGT+GGG - chr8_2:45763753-45763772 Msa1250290:intron 45.0%
! ATCGCGTTTGGAGTTTGCGA+TGG - chr8_2:45757908-45757927 Msa1250290:three_prime_UTR 50.0%
TAGGGAGGCTGGATTTGATG+AGG - chr8_2:45758028-45758047 Msa1250290:three_prime_UTR 50.0%
!! GGAACTCGGCATTGGTTGTT+TGG - chr8_2:45758390-45758409 Msa1250290:three_prime_UTR 50.0%
GTCAAATCACTAGGAGGCAG+AGG - chr8_2:45758472-45758491 Msa1250290:intron 50.0%
AATCACTAGGAGGCAGAGGA+AGG - chr8_2:45758476-45758495 Msa1250290:intron 50.0%
TTAGCCGACCTCACTAAGTG+GGG - chr8_2:45758592-45758611 Msa1250290:CDS 50.0%
CTTACCCCACTTAGTGAGGT+CGG + chr8_2:45758599-45758618 None:intergenic 50.0%
AGCATGGACCGGAACTGATT+AGG + chr8_2:45758932-45758951 None:intergenic 50.0%
TGACCATGAAAGCTAAGGCG+TGG + chr8_2:45759384-45759403 None:intergenic 50.0%
TGGGCCTTCTCATATTGGAG+AGG - chr8_2:45759649-45759668 Msa1250290:CDS 50.0%
GGCGTCAAAGATGCATGCAT+AGG - chr8_2:45759810-45759829 Msa1250290:CDS 50.0%
TTCCGTACGCATCTCATGCA+AGG + chr8_2:45760044-45760063 None:intergenic 50.0%
AAGCGCGTGAAGATATCCTC+AGG - chr8_2:45760236-45760255 Msa1250290:CDS 50.0%
TCATCACAGCTGTGAGAGAC+GGG + chr8_2:45760423-45760442 None:intergenic 50.0%
ATCCTCGCTCAACCAAAGAG+AGG - chr8_2:45760533-45760552 Msa1250290:CDS 50.0%
ATCCTCTCTTTGGTTGAGCG+AGG + chr8_2:45760538-45760557 None:intergenic 50.0%
!!! GGCTGGTTTTCTTGTCATGG+AGG + chr8_2:45760647-45760666 None:intergenic 50.0%
AACCAGCCTACAACTACTGG+AGG - chr8_2:45760659-45760678 Msa1250290:CDS 50.0%
GAGACGAGCTTGGGAATTGA+AGG - chr8_2:45761153-45761172 Msa1250290:intron 50.0%
ACGAGCTTGGGAATTGAAGG+AGG - chr8_2:45761156-45761175 Msa1250290:intron 50.0%
GGAGGACCAAATCCTGGAAA+GGG - chr8_2:45761195-45761214 Msa1250290:intron 50.0%
CCAACTCATGTTCCCTTTCC+AGG + chr8_2:45761210-45761229 None:intergenic 50.0%
CCTGGAAAGGGAACATGAGT+TGG - chr8_2:45761207-45761226 Msa1250290:intron 50.0%
GAGCAGTTGACAGTTCCACT+AGG + chr8_2:45761270-45761289 None:intergenic 50.0%
! AAGCCTCAAAGCGTCTGAGA+AGG - chr8_2:45761306-45761325 Msa1250290:intron 50.0%
ACTCCTTCTCAGACGCTTTG+AGG + chr8_2:45761312-45761331 None:intergenic 50.0%
GCAGGAGTCTTTGGCATCTT+TGG - chr8_2:45761396-45761415 Msa1250290:intron 50.0%
! GGGGTTACTTGCTAGTGAAC+GGG - chr8_2:45761756-45761775 Msa1250290:intron 50.0%
TGGCACATGAACATGCTGAG+TGG - chr8_2:45761797-45761816 Msa1250290:intron 50.0%
CTTCCCGCCTCTTCTCAATA+AGG + chr8_2:45761894-45761913 None:intergenic 50.0%
! TGGCGTTCTTCTGAAAAGGC+AGG + chr8_2:45762738-45762757 None:intergenic 50.0%
AAGAACGCCAAGTAGGCAGA+GGG - chr8_2:45762748-45762767 Msa1250290:intron 50.0%
! CTCTTTTCCCTCTGCCTACT+TGG + chr8_2:45762758-45762777 None:intergenic 50.0%
CAAGTAGGCAGAGGGAAAAG+AGG - chr8_2:45762756-45762775 Msa1250290:intron 50.0%
TTCTGCGCCAGATCTACAAG+TGG + chr8_2:45762813-45762832 None:intergenic 50.0%
GCCATTCGTTCTTCTGCTCT+TGG + chr8_2:45762843-45762862 None:intergenic 50.0%
TAGATCAGGCCACTACCTAC+TGG - chr8_2:45762874-45762893 Msa1250290:intron 50.0%
TCAGAGATTCAGCAGGTGTC+AGG - chr8_2:45763347-45763366 Msa1250290:intron 50.0%
!! CTGGCTTTGTACAGGGACTT+TGG - chr8_2:45763746-45763765 Msa1250290:intron 50.0%
!! TGGATGTGGGCATTGGTAGT+TGG - chr8_2:45763766-45763785 Msa1250290:intron 50.0%
TGTTGATGCTGTACTGGGCT+AGG - chr8_2:45764400-45764419 Msa1250290:five_prime_UTR 50.0%
GACAGAGGTTTGGCAGAGCT+AGG + chr8_2:45757945-45757964 None:intergenic 55.0%
GATCTGGAAACGGCTTAGGG+AGG - chr8_2:45758013-45758032 Msa1250290:three_prime_UTR 55.0%
TTGTTGGGCCGTAAAGACGG+TGG - chr8_2:45758368-45758387 Msa1250290:intron 55.0%
TGTTGGGCCGTAAAGACGGT+GGG - chr8_2:45758369-45758388 Msa1250290:intron 55.0%
CCGAGTTCCCACCGTCTTTA+CGG + chr8_2:45758379-45758398 None:intergenic 55.0%
CCGTAAAGACGGTGGGAACT+CGG - chr8_2:45758376-45758395 Msa1250290:intron 55.0%
ACAAATGGCTGCGGATCCAC+AGG + chr8_2:45758772-45758791 None:intergenic 55.0%
GGCCTTGCATGAGATGCGTA+CGG - chr8_2:45760039-45760058 Msa1250290:CDS 55.0%
CGCGTGAAGATATCCTCAGG+CGG - chr8_2:45760239-45760258 Msa1250290:CDS 55.0%
GCTGTGAGAGACGGGAAAGA+GGG + chr8_2:45760415-45760434 None:intergenic 55.0%
AGCTGTGAGAGACGGGAAAG+AGG + chr8_2:45760416-45760435 None:intergenic 55.0%
ACAACGGGAGGACCAAATCC+TGG - chr8_2:45761189-45761208 Msa1250290:intron 55.0%
GGGAGGACCAAATCCTGGAA+AGG - chr8_2:45761194-45761213 Msa1250290:intron 55.0%
! GTGGTTTGGCAAGATGCAGC+AGG - chr8_2:45761816-45761835 Msa1250290:intron 55.0%
!! AGGAGCGAGCGGATTTTCAG+CGG - chr8_2:45761836-45761855 Msa1250290:intron 55.0%
TGAGAAGAGGCGGGAAGAAG+TGG - chr8_2:45761897-45761916 Msa1250290:intron 55.0%
GAGAATCGAGCAGCACTAGC+AGG + chr8_2:45762441-45762460 None:intergenic 55.0%
! CTAGTGCTGCTCGATTCTCC+TGG - chr8_2:45762442-45762461 Msa1250290:CDS 55.0%
GAAGAACGCCAAGTAGGCAG+AGG - chr8_2:45762747-45762766 Msa1250290:intron 55.0%
GGGACTTTGGATGTGGGCAT+TGG - chr8_2:45763759-45763778 Msa1250290:intron 55.0%
! GCTTTTGGCACAATGCTGGG+TGG - chr8_2:45764219-45764238 Msa1250290:CDS 55.0%
TGGAAACGGCTTAGGGAGGC+TGG - chr8_2:45758017-45758036 Msa1250290:three_prime_UTR 60.0%
AGACGGTGGGAACTCGGCAT+TGG - chr8_2:45758382-45758401 Msa1250290:three_prime_UTR 60.0%
GGCCTCCAGTAGTTGTAGGC+TGG + chr8_2:45760664-45760683 None:intergenic 60.0%
GGGTGGCCTCCAGTAGTTGT+AGG + chr8_2:45760668-45760687 None:intergenic 60.0%
CAAGATGCAGCAGGAGCGAG+CGG - chr8_2:45761825-45761844 Msa1250290:intron 60.0%
!! GGAGCGAGCGGATTTTCAGC+GGG - chr8_2:45761837-45761856 Msa1250290:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 45757708 45764492 45757708 ID=Msa1250290;Name=Msa1250290
chr8_2 mRNA 45757708 45764492 45757708 ID=Msa1250290-mRNA-1;Parent=Msa1250290;Name=Msa1250290-mRNA-1;_AED=0.03;_eAED=0.03;_QI=219|1|1|1|0.75|0.77|9|596|1056
chr8_2 exon 45757708 45758240 45757708 ID=Msa1250290-mRNA-1:exon:13798;Parent=Msa1250290-mRNA-1
chr8_2 exon 45758378 45758440 45758378 ID=Msa1250290-mRNA-1:exon:13797;Parent=Msa1250290-mRNA-1
chr8_2 exon 45758572 45758878 45758572 ID=Msa1250290-mRNA-1:exon:13796;Parent=Msa1250290-mRNA-1
chr8_2 exon 45759305 45761163 45759305 ID=Msa1250290-mRNA-1:exon:13795;Parent=Msa1250290-mRNA-1
chr8_2 exon 45761312 45761395 45761312 ID=Msa1250290-mRNA-1:exon:13794;Parent=Msa1250290-mRNA-1
chr8_2 exon 45761496 45761766 45761496 ID=Msa1250290-mRNA-1:exon:13793;Parent=Msa1250290-mRNA-1
chr8_2 exon 45761916 45762169 45761916 ID=Msa1250290-mRNA-1:exon:13792;Parent=Msa1250290-mRNA-1
chr8_2 exon 45762364 45762573 45762364 ID=Msa1250290-mRNA-1:exon:13791;Parent=Msa1250290-mRNA-1
chr8_2 exon 45764088 45764492 45764088 ID=Msa1250290-mRNA-1:exon:13790;Parent=Msa1250290-mRNA-1
chr8_2 five_prime_UTR 45764274 45764492 45764274 ID=Msa1250290-mRNA-1:five_prime_utr;Parent=Msa1250290-mRNA-1
chr8_2 CDS 45764088 45764273 45764088 ID=Msa1250290-mRNA-1:cds;Parent=Msa1250290-mRNA-1
chr8_2 CDS 45762364 45762573 45762364 ID=Msa1250290-mRNA-1:cds;Parent=Msa1250290-mRNA-1
chr8_2 CDS 45761916 45762169 45761916 ID=Msa1250290-mRNA-1:cds;Parent=Msa1250290-mRNA-1
chr8_2 CDS 45761496 45761766 45761496 ID=Msa1250290-mRNA-1:cds;Parent=Msa1250290-mRNA-1
chr8_2 CDS 45761312 45761395 45761312 ID=Msa1250290-mRNA-1:cds;Parent=Msa1250290-mRNA-1
chr8_2 CDS 45759305 45761163 45759305 ID=Msa1250290-mRNA-1:cds;Parent=Msa1250290-mRNA-1
chr8_2 CDS 45758572 45758878 45758572 ID=Msa1250290-mRNA-1:cds;Parent=Msa1250290-mRNA-1
chr8_2 three_prime_UTR 45758378 45758440 45758378 ID=Msa1250290-mRNA-1:three_prime_utr;Parent=Msa1250290-mRNA-1
chr8_2 three_prime_UTR 45757708 45758240 45757708 ID=Msa1250290-mRNA-1:three_prime_utr;Parent=Msa1250290-mRNA-1
Gene Sequence

>Msa1250290

ATGGAGATTTCGACACCTAGCTCTGCCAAACCTCTGTCAATTACTCCGAGTTCTAGGGTTTTGAGAAGTCCACTTTCCGATGAACAGATCTGGAAACGGCTTAGGGAGGCTGGATTTGATGAGGAATCGATTAAGCATAAGGATAAAGCTGCGCTTGTAGCTTATATTGCTAAGCTTGAAGCTGAGATATATGATCATCAACATCATATGGGCCTTCTCATATTGGAGAGGAAGGAATTGGTTTCCAAGTATGAACATGTTAAAACCATGGTCGAGTCATCTGAGTTAGTGCATAACCGTGATTTGTCCACGAATAAATCTGCGTTAGCTGAATCAAGAAAACGGGAAGAATCTTTGAAGAAGACAATAGGCGTCAAAGATGCATGCATAGGAAGTCTTGAGAAGGCCTTGCATGAGATGCGTACGGAATGTGCTGAAACAAAGGTTGCAGCTGAAAGTAAATTAGCTGAAGCACATCAATTGACAGATGAAGCAGAAAAGAAATTTACGGAGGCTGAAGCTAAAGTGCGTGCTGCAGAATCTTTGCAAGCAGATGCTAATCGATATAACAGTGTTGCAGAAAGGAAGCTTCGTGATGTTGAAGCGCGTGAAGATATCCTCAGGCGGCAAATTATATCTTTCAAGTCAGACTGTGATGAAAAAGATAAGGAGATGAATCTTGAGAGGCAATCCCTTTCTGAAAGGCAAAAGGTTTTACAACAAGAACAGGAAAGGTTACTTCAATCACAATCCTCGCTCAACCAAAGAGAGGATCATCTTTTTAGTAGATCCCAGGAATTAGATCGTCTTCAAAAAGAGTTGGAGGACACAAAGTTTAAACTTGAAAAGGAAAATGAAGCCCTCCATGACAAGAAAACCAGCCTACAACTACTGGAGGCCACCCTTACACAACAAGAACAGGCACTCACTAAATGGAAAACTGAGCTTAACAAGAAAGAGCAAGAGTTGCTTGAATTTGAAGTGAAACTTTCTAATAGAGAATCTGATGAAACTCAGAAGGCTATAGCAGATCGGGAAGCCACAATGAGAGCAAAAAAACATGATTTAGAAGTTGAGCTACAAATGCAGCGCAAATCGGTTGAAAATGAAATTGAGACTAAGAGACGAGCTTGGGAATTGAAGGAGGTTGATCTTAAACAACGGGAGGACCAAATCCTGGAAAGGGAACATGAGTTGGAAGTTCTATCAAGATCACTGAGTGAGAAGGAGAAAGACCTAGTGGAACTGTCAACTGCTCTTAAAGATAAAGATCAAAGCCTCAAAGCGTCTGAGAAGGAGTTTGAATTAAACACAACCCTTTTGCAAAAGGAGAAAGATGATATTGAACAAGCCAAGAAAGATCTGCAGGAGTCTTTGGCATCTTTGGAAAATGAAAAAAGACAAGTTGATAACGCAAAGCAGAGATTGGAGGTCATCCAAAGTGAAACAGGCGACTTGTCAATTTTTGAAGTGAAACTAAAGGAAGAGATTGATCTTGTAAGATCTCAGAATTTGGAGCTATTGGCTGAGGCTGATAAGTTGAAAGCTGAGAAGGCCAAGTTTGAAGTTGAGTGGGAGCTTCTTGATGAAAAAAAAGAAGAGTTGCGGAAAGAAGCAGAATTTATAGAAAATGAAAGGAAGGCAGTTTCCACTTTTATTAAGAATGAGCGCGACAAGCTAAGAGAAGAAAAGGAAAATTTGCGTAAACAGTACACCCATGACTTGGGGTTACTTGCTAGTGAACGGGAAAATTTCATGAAGAAGATGGCACATGAACATGCTGAGTGGTTTGGCAAGATGCAGCAGGAGCGAGCGGATTTTCAGCGGGATATTGAGATGCAAAAAAGGGAGCTAAATAACCTTATTGAGAAGAGGCGGGAAGAAGTGGAAAGTTATTTGAAGGAAAGAGAAACAGCTTTTGAGGAAGAGAAGAATAGGGAGCTCCAGCATATTGATGCTCTTAAGGAGAAAGCTGCAAAAGAATTGGAACAGGTTTCCTTGGAGATGAAAAGGCTTCAAACTGAGCGGACTGAGATAAATTTGGATCGTGACCTAAGAAATCGAGAATGGGCTGAACTAAATAATTGTATTAAAGAACTTGAGGTTCAAAGGGATAAACTACAAAAACAGAGAGAACTGTTGCATGCTGATAGAATCAACATTTATTCTAAGACTGAAGAATTGAAGAAATTGGAAGATTCAAAAGTTGTCTCTGATGACCTTGCTATTGTTGAAATGCTTAAATCTGATATGGAGTATAACCAACAGAAAATATCTTCAAGGAAAAATTTGAAGCATCAGACTCTTACACAAGGTGGCCGCTTGAGTTCCTGCAAAGATGTGGATGTTGATAACATTGGCAATGGGTTTGATACTCCATTTGTGCAGAAGTCATCAGGTGTTTCTCCTGCTAGTGCTGCTCGATTCTCCTGGATAAAACGATGCACAGAGCTAATATTCCGAAATTCTCCTGATACGCCACTCACGAAAAAAGGAAATTTGGCTGTGGCTTCTGATACAAATAATGGTAGCAATGGGCAAAAGCACTTGGAAAATGACAAGCCACGTGGTAATTTTAGTAATGGACGGCAAATGGGGTATTCTTTTGGAGAACCAAAAGTAATTGTTGAAGTACCCTCTCTAGATGGAAATGCTAGCAGAACAAGCGAGCTCAAATCTGTGACTAAAGATGTTAATGGGAAACCTGCCTTTTCAGAAGAACGCCAAGTAGGCAGAGGGAAAAGAGGCAGAGAGAACTTGATTACTAAAGTTGCTGATCCACTTGTAGATCTGGCGCAGAATAAGAAACCAAGAGCAGAAGAACGAATGGCCAAAAATCCTTTAGATCAGGCCACTACCTACTGTGTGCATTCAACCCAGTCAGATATATCAGAGATTCAGCAGGTGTCAGGTGCTTCAAATCATAAAAAAGGGAACACCGAAGAAGCTCGTGTAGTAATGGTTGATAAGGTTATTCATGTTTCAGAAGTGACTTCTGAGAAAGTTGATACTCTCATCATTCCCAATCAAGATAATCTGCACAGAGAAACAATCGATCAGTCAAACTCTAAAACTAGATCCGAAGAAATTTTGCCTTGTGGTTCTAGTGTATTGGAGAACACAGAAGGAATACGGCAAGAAAACACTGAACCTGTTTCCGATTACTGTTAG
Protein sequence

>Msa1250290

MEISTPSSAKPLSITPSSRVLRSPLSDEQIWKRLREAGFDEESIKHKDKAALVAYIAKLEAEIYDHQHHMGLLILERKELVSKYEHVKTMVESSELVHNRDLSTNKSALAESRKREESLKKTIGVKDACIGSLEKALHEMRTECAETKVAAESKLAEAHQLTDEAEKKFTEAEAKVRAAESLQADANRYNSVAERKLRDVEAREDILRRQIISFKSDCDEKDKEMNLERQSLSERQKVLQQEQERLLQSQSSLNQREDHLFSRSQELDRLQKELEDTKFKLEKENEALHDKKTSLQLLEATLTQQEQALTKWKTELNKKEQELLEFEVKLSNRESDETQKAIADREATMRAKKHDLEVELQMQRKSVENEIETKRRAWELKEVDLKQREDQILEREHELEVLSRSLSEKEKDLVELSTALKDKDQSLKASEKEFELNTTLLQKEKDDIEQAKKDLQESLASLENEKRQVDNAKQRLEVIQSETGDLSIFEVKLKEEIDLVRSQNLELLAEADKLKAEKAKFEVEWELLDEKKEELRKEAEFIENERKAVSTFIKNERDKLREEKENLRKQYTHDLGLLASERENFMKKMAHEHAEWFGKMQQERADFQRDIEMQKRELNNLIEKRREEVESYLKERETAFEEEKNRELQHIDALKEKAAKELEQVSLEMKRLQTERTEINLDRDLRNREWAELNNCIKELEVQRDKLQKQRELLHADRINIYSKTEELKKLEDSKVVSDDLAIVEMLKSDMEYNQQKISSRKNLKHQTLTQGGRLSSCKDVDVDNIGNGFDTPFVQKSSGVSPASAARFSWIKRCTELIFRNSPDTPLTKKGNLAVASDTNNGSNGQKHLENDKPRGNFSNGRQMGYSFGEPKVIVEVPSLDGNASRTSELKSVTKDVNGKPAFSEERQVGRGKRGRENLITKVADPLVDLAQNKKPRAEERMAKNPLDQATTYCVHSTQSDISEIQQVSGASNHKKGNTEEARVVMVDKVIHVSEVTSEKVDTLIIPNQDNLHRETIDQSNSKTRSEEILPCGSSVLENTEGIRQENTEPVSDYC*