AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0566310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566310 MtrunA17_Chr8g0380791 96.871 767 23 1 1 766 1 767 0.0 1540
Msa0566310 MtrunA17_Chr1g0180261 50.897 780 354 6 6 763 44 816 0.0 765
Msa0566310 MtrunA17_Chr3g0082501 40.597 771 359 17 9 757 60 753 0.0 540
Msa0566310 MtrunA17_Chr1g0171491 38.235 782 402 13 9 759 57 788 6.90e-180 535
Msa0566310 MtrunA17_Chr1g0171491 37.815 119 74 0 76 194 55 173 3.18e-18 89.7
Msa0566310 MtrunA17_Chr3g0115111 38.089 785 366 18 1 764 45 730 7.67e-171 509
Msa0566310 MtrunA17_Chr8g0353121 38.739 777 394 15 2 764 41 749 2.91e-169 506
Msa0566310 MtrunA17_Chr7g0256301 39.142 769 399 16 8 757 66 784 7.82e-169 506
Msa0566310 MtrunA17_Chr3g0131001 38.722 767 345 15 9 764 51 703 6.55e-162 485
Msa0566310 MtrunA17_Chr3g0131001 40.000 85 51 0 7 91 141 225 9.15e-13 72.0
Msa0566310 MtrunA17_Chr5g0424301 46.651 433 181 9 341 759 331 727 2.34e-120 378
Msa0566310 MtrunA17_Chr5g0424301 46.429 168 90 0 9 176 65 232 8.54e-48 181
Msa0566310 MtrunA17_Chr5g0424301 35.135 148 94 1 47 194 59 204 9.92e-22 100
Msa0566310 MtrunA17_Chr8g0385201 44.118 442 190 8 327 764 277 665 2.37e-116 366
Msa0566310 MtrunA17_Chr8g0385201 44.970 169 92 1 6 173 23 191 3.82e-43 166
Msa0566310 MtrunA17_Chr8g0385201 37.956 137 84 1 59 194 30 166 1.80e-19 93.2
Msa0566310 MtrunA17_Chr8g0382971 40.934 364 147 8 6 337 18 345 2.75e-65 221
Msa0566310 MtrunA17_Chr8g0377671 54.167 192 88 0 1 192 8 199 9.57e-63 212
Msa0566310 MtrunA17_Chr8g0377671 40.252 159 95 0 12 170 111 269 3.59e-30 120
Msa0566310 MtrunA17_Chr8g0377191 53.226 186 87 0 7 192 6 191 4.73e-57 193
Msa0566310 MtrunA17_Chr8g0377191 36.434 129 58 2 102 206 9 137 6.52e-13 68.6
Msa0566310 MtrunA17_Chr4g0059911 53.191 188 87 1 7 193 3 190 1.24e-55 195
Msa0566310 MtrunA17_Chr4g0059911 37.241 145 91 0 15 159 104 248 1.95e-20 94.0
Msa0566310 MtrunA17_Chr8g0377221 42.692 260 103 6 12 231 4 257 1.12e-51 181
Msa0566310 MtrunA17_Chr8g0383551 35.200 375 150 11 13 337 28 359 5.45e-48 174
Msa0566310 MtrunA17_Chr8g0385241 37.135 342 151 9 12 334 124 420 8.81e-46 169
Msa0566310 MtrunA17_Chr8g0385241 42.411 224 95 2 5 194 2 225 4.22e-42 159
Msa0566310 MtrunA17_Chr2g0316611 47.179 195 102 1 6 199 29 223 4.72e-44 163
Msa0566310 MtrunA17_Chr2g0316611 46.316 190 101 1 11 199 172 361 7.81e-41 154
Msa0566310 MtrunA17_Chr2g0316611 41.489 188 109 1 13 199 105 292 1.88e-36 141
Msa0566310 MtrunA17_Chr2g0316611 52.756 127 60 0 13 139 243 369 3.46e-34 134
Msa0566310 MtrunA17_Chr2g0316611 56.410 78 26 1 5 74 296 373 6.50e-18 86.7
Msa0566310 MtrunA17_Chr2g0316631 39.167 240 99 2 6 198 29 268 6.09e-43 158
Msa0566310 MtrunA17_Chr2g0316631 43.085 188 106 1 13 199 105 292 4.13e-39 147
Msa0566310 MtrunA17_Chr2g0316631 43.089 123 70 0 13 135 174 296 1.59e-25 107
Msa0566310 MtrunA17_Chr2g0316631 64.062 64 23 0 11 74 241 304 1.32e-19 90.5
Msa0566310 MtrunA17_Chr6g0467061 44.560 193 106 1 6 197 12 204 1.63e-41 154
Msa0566310 MtrunA17_Chr6g0467061 44.920 187 102 1 13 198 88 274 2.09e-38 145
Msa0566310 MtrunA17_Chr6g0467061 43.017 179 102 0 13 191 157 335 8.75e-33 129
Msa0566310 MtrunA17_Chr8g0377211 45.294 170 69 2 1 170 8 153 4.04e-40 145
Msa0566310 MtrunA17_Chr8g0377211 52.252 111 52 1 82 192 20 129 9.69e-29 113
Msa0566310 MtrunA17_Chr5g0398011 54.054 111 51 0 14 124 36 146 2.95e-31 119
Msa0566310 MtrunA17_Chr5g0398011 63.830 47 17 0 13 59 104 150 3.10e-14 70.9
Msa0566310 MtrunA17_Chr5g0398011 32.456 114 77 0 56 169 32 145 1.03e-13 69.3
Msa0566310 MtrunA17_Chr7g0233351 36.170 188 117 1 12 196 191 378 1.02e-30 126
Msa0566310 MtrunA17_Chr7g0233351 34.266 143 91 1 4 143 226 368 5.58e-19 90.5
Msa0566310 MtrunA17_Chr7g0233351 41.304 92 54 0 102 193 189 280 2.05e-14 76.3
Msa0566310 MtrunA17_Chr7g0233351 25.000 228 146 3 51 253 184 411 5.46e-14 75.1
Msa0566310 MtrunA17_Chr3g0114791 34.857 175 114 0 12 186 184 358 7.28e-29 120
Msa0566310 MtrunA17_Chr3g0114791 35.965 114 73 0 82 195 185 298 1.29e-12 70.5
Msa0566310 MtrunA17_Chr3g0114791 39.785 93 56 0 100 192 180 272 3.39e-12 69.3
Msa0566310 MtrunA17_Chr4g0055371 35.955 178 114 0 12 189 171 348 1.01e-28 119
Msa0566310 MtrunA17_Chr4g0055371 35.036 137 89 0 7 143 212 348 9.98e-19 89.7
Msa0566310 MtrunA17_Chr4g0055371 39.474 114 69 0 82 195 172 285 4.34e-14 75.1
Msa0566310 MtrunA17_Chr8g0383331 44.094 127 71 0 56 182 1 127 1.38e-28 112
Msa0566310 MtrunA17_Chr8g0383331 36.913 149 94 0 11 159 2 150 1.80e-23 97.8
Msa0566310 MtrunA17_Chr8g0383331 41.111 90 30 1 126 192 2 91 2.82e-13 68.6
Msa0566310 MtrunA17_Chr5g0424111 36.313 179 114 0 8 186 192 370 4.42e-28 118
Msa0566310 MtrunA17_Chr5g0424111 36.090 133 85 0 10 142 240 372 8.58e-17 84.0
Msa0566310 MtrunA17_Chr5g0424111 37.719 114 71 0 82 195 197 310 1.14e-12 70.9
Msa0566310 MtrunA17_Chr5g0398021 47.748 111 56 1 4 112 2 112 3.46e-27 108
Msa0566310 MtrunA17_Chr5g0398021 35.088 114 74 0 71 184 2 115 5.09e-14 70.5
Msa0566310 MtrunA17_Chr5g0398021 34.694 98 64 0 61 158 15 112 9.53e-13 66.6
Msa0566310 MtrunA17_Chr5g0398021 31.373 102 70 0 93 194 1 102 6.14e-11 61.6
Msa0566310 MtrunA17_Chr8g0336161 33.146 178 119 0 12 189 196 373 6.76e-25 108
Msa0566310 MtrunA17_Chr8g0336161 34.307 137 90 0 7 143 237 373 2.86e-18 88.6
Msa0566310 MtrunA17_Chr8g0336161 43.478 92 52 0 102 193 194 285 8.07e-15 77.8
Msa0566310 MtrunA17_Chr1g0200881 30.488 246 144 12 409 638 1317 1551 6.64e-15 79.3
Msa0566310 MtrunA17_Chr4g0069951 31.217 189 110 7 437 611 1552 1734 1.28e-14 78.6
Msa0566310 MtrunA17_Chr8g0345151 30.688 189 111 7 437 611 1558 1740 1.60e-13 74.7
Msa0566310 MtrunA17_Chr8g0377201 59.184 49 19 1 12 60 26 73 1.45e-12 63.9
Msa0566310 MtrunA17_Chr8g0377201 59.574 47 19 0 148 194 1 47 1.16e-11 61.6
Msa0566310 MtrunA17_Chr1g0210831 29.134 127 90 0 61 187 615 741 6.70e-12 69.3
Msa0566310 MtrunA17_Chr3g0085921 54.902 51 23 0 142 192 1 51 8.02e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566310 AT1G10900.2 64.032 759 263 5 6 764 4 752 0.0 987
Msa0566310 AT1G10900.1 64.032 759 263 5 6 764 4 752 0.0 987
Msa0566310 AT1G10900.3 64.032 759 263 5 6 764 4 752 0.0 987
Msa0566310 AT1G60890.1 61.935 775 268 7 6 764 4 767 0.0 969
Msa0566310 AT1G60890.2 62.047 772 266 7 9 764 19 779 0.0 968
Msa0566310 AT3G09920.3 49.871 774 365 12 6 764 46 811 0.0 739
Msa0566310 AT3G09920.4 49.871 774 365 12 6 764 46 811 0.0 739
Msa0566310 AT3G09920.2 49.871 774 365 12 6 764 46 811 0.0 739
Msa0566310 AT3G09920.1 49.871 774 365 12 6 764 46 811 0.0 739
Msa0566310 AT3G07960.1 40.180 779 355 14 9 764 23 713 0.0 558
Msa0566310 AT2G41210.1 40.969 764 375 16 9 759 66 766 0.0 556
Msa0566310 AT3G56960.2 39.948 771 387 17 9 764 68 777 0.0 544
Msa0566310 AT3G56960.1 39.948 771 387 17 9 764 68 777 0.0 544
Msa0566310 AT1G77740.2 39.477 765 360 18 9 759 73 748 6.71e-168 503
Msa0566310 AT1G77740.1 39.477 765 360 18 9 759 73 748 6.71e-168 503
Msa0566310 AT3G07960.3 42.857 602 282 8 9 591 23 581 7.69e-165 490
Msa0566310 AT3G07960.2 42.857 602 282 8 9 591 23 581 1.08e-164 489
Msa0566310 AT3G07960.4 42.857 602 282 8 9 591 23 581 1.08e-164 489
Msa0566310 AT1G21980.1 36.589 768 387 19 9 764 72 751 2.65e-149 454
Msa0566310 AT2G26420.2 36.471 765 378 16 6 759 46 713 2.56e-147 448
Msa0566310 AT2G26420.3 36.471 765 378 16 6 759 46 713 2.56e-147 448
Msa0566310 AT2G26420.1 36.508 756 376 15 6 759 46 699 1.53e-143 438
Msa0566310 AT1G01460.1 34.180 433 239 10 365 764 3 422 1.96e-74 248
Msa0566310 AT4G01190.3 34.063 411 245 9 363 763 8 402 1.60e-69 234
Msa0566310 AT4G01190.2 34.063 411 245 9 363 763 8 402 1.60e-69 234
Msa0566310 AT4G01190.1 34.596 396 236 8 378 763 10 392 1.81e-69 234
Msa0566310 AT4G17080.1 34.270 178 117 0 10 187 254 431 5.53e-28 119
Msa0566310 AT4G17080.1 35.000 160 104 0 35 194 256 415 6.64e-22 100
Msa0566310 AT4G17080.1 32.836 134 90 0 10 143 300 433 4.94e-18 88.6
Msa0566310 AT1G77660.1 35.429 175 113 0 12 186 177 351 1.03e-27 117
Msa0566310 AT1G77660.1 33.099 142 92 1 4 142 212 353 5.51e-16 81.6
Msa0566310 AT1G77660.1 35.088 114 74 0 82 195 178 291 2.56e-11 67.0
Msa0566310 AT2G35170.1 34.595 185 120 1 3 187 217 400 1.20e-26 114
Msa0566310 AT2G35170.1 34.028 144 86 2 56 195 201 339 8.58e-13 72.0
Msa0566310 AT1G21920.1 34.091 176 116 0 12 187 173 348 1.77e-26 113
Msa0566310 AT1G21920.1 32.824 131 88 0 10 140 217 347 1.09e-14 77.4
Msa0566310 AT1G21920.1 35.965 114 73 0 82 195 174 287 9.14e-12 68.2
Msa0566310 AT1G21920.2 34.091 176 116 0 12 187 173 348 2.25e-26 112
Msa0566310 AT1G21920.2 32.824 131 88 0 10 140 217 347 1.34e-14 76.6
Msa0566310 AT1G21920.2 35.965 114 73 0 82 195 174 287 9.45e-12 67.8
Msa0566310 AT1G34260.2 30.189 212 125 9 392 588 1180 1383 5.90e-17 86.3
Msa0566310 AT1G34260.1 30.189 212 125 9 392 588 1180 1383 5.90e-17 86.3
Msa0566310 AT1G34260.3 30.189 212 125 9 392 588 1180 1383 5.90e-17 86.3
Msa0566310 AT1G34260.4 30.189 212 125 9 392 588 940 1143 7.21e-17 85.9
Msa0566310 AT4G33240.3 31.390 223 130 9 380 588 1440 1653 2.79e-15 80.9
Msa0566310 AT4G33240.2 31.390 223 130 9 380 588 1443 1656 2.82e-15 80.9
Msa0566310 AT4G33240.6 31.390 223 130 9 380 588 1444 1657 2.84e-15 80.9
Msa0566310 AT4G33240.1 31.390 223 130 9 380 588 1444 1657 2.84e-15 80.9
Msa0566310 AT4G33240.7 31.390 223 130 9 380 588 1444 1657 2.84e-15 80.9
Msa0566310 AT4G33240.4 31.390 223 130 9 380 588 1441 1654 2.92e-15 80.9
Msa0566310 AT4G33240.5 31.390 223 130 9 380 588 1404 1617 2.95e-15 80.9
Msa0566310 AT1G71010.1 32.727 165 97 5 437 588 1414 1577 1.34e-13 75.5
Msa0566310 AT1G75010.1 30.709 127 88 0 61 187 604 730 2.30e-12 71.2
Msa0566310 AT1G75010.1 39.080 87 53 0 109 195 606 692 9.72e-11 65.9

Find 188 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACATGACACTTAATTATT+TGG 0.048903 4_1:+67369736 Msa0566310:three_prime_UTR
CAGAATATCACTGATTTATT+TGG 0.086989 4_1:-67365188 None:intergenic
CAGATGTTTACGAAGGTTTA+TGG 0.157602 4_1:+67365667 Msa0566310:CDS
CTACGGTTAAATCTTGAATT+TGG 0.182290 4_1:-67366005 None:intergenic
CCTACATGATGGTAGTATTT+AGG 0.206353 4_1:-67367192 None:intergenic
AGCTGCTTAATACTATTCTT+TGG 0.209907 4_1:+67364311 None:intergenic
CATCAATTTCATGGATAAAA+AGG 0.210898 4_1:+67369472 Msa0566310:CDS
TTCTCTAGACTGCAAGTTCT+TGG 0.217156 4_1:+67368650 Msa0566310:CDS
TACAGACATCACGGTATTTC+CGG 0.243562 4_1:-67369500 None:intergenic
TTTGATGGTTGTTGGTTAAA+TGG 0.249491 4_1:+67365813 Msa0566310:CDS
TTTGAGAGAAATGTTCAAAT+TGG 0.275332 4_1:+67366879 Msa0566310:CDS
GAAGTTCGGTCGTCTGATTT+TGG 0.281272 4_1:+67366610 Msa0566310:CDS
CAAATCAATCATATACTAAA+TGG 0.293412 4_1:-67369703 None:intergenic
TCAGATGGAGGACTTTATAT+TGG 0.295938 4_1:+67365867 Msa0566310:CDS
GAAGTATCTATATTGGAAAT+TGG 0.296465 4_1:+67365736 Msa0566310:CDS
AATTCAAACAGCTCAATAAA+AGG 0.308780 4_1:+67369672 Msa0566310:three_prime_UTR
CACATGACACTTAATTATTT+GGG 0.313104 4_1:+67369737 Msa0566310:three_prime_UTR
AACACTGAGAGGTGGGAAAA+AGG 0.313597 4_1:+67367263 Msa0566310:CDS
ACTCTTATTACAAAATTCTT+CGG 0.317002 4_1:+67367228 Msa0566310:CDS
TGAACGTTTCATCAATTTCA+TGG 0.329150 4_1:+67369463 Msa0566310:CDS
GTAAAGAAGAGTTCAATTAT+AGG 0.329256 4_1:+67366329 Msa0566310:CDS
TATGAAGGGGATTGGATAGA+TGG 0.337976 4_1:+67365468 Msa0566310:CDS
GGTATCTGGTATGGGTAATA+TGG 0.339467 4_1:+67366196 Msa0566310:CDS
CTCTTATTACAAAATTCTTC+GGG 0.342573 4_1:+67367229 Msa0566310:CDS
GCTGCTTAATACTATTCTTT+GGG 0.342654 4_1:+67364312 None:intergenic
ATCTCAAAGTACTTCATTGT+TGG 0.345418 4_1:+67366079 Msa0566310:CDS
ATTATTGCCCTATGGTCTTC+AGG 0.349462 4_1:+67366719 Msa0566310:CDS
AATGATGGAAGTATCTATAT+TGG 0.350708 4_1:+67365729 Msa0566310:CDS
CTCAGATTGCCGGTGCAATT+AGG 0.361997 4_1:+67369227 Msa0566310:intron
AAAGGAACATTCTATCCTTC+TGG 0.363846 4_1:+67365918 Msa0566310:CDS
CTCAGATTGACCTTCATTAG+AGG 0.364250 4_1:-67366174 None:intergenic
GTTTAACCTTTCAAAAGAAA+TGG 0.366422 4_1:+67365147 Msa0566310:five_prime_UTR
TGATTTATTTGGATAACTTC+AGG 0.383109 4_1:-67365177 None:intergenic
GTACATAATCATTCATCCTT+TGG 0.383660 4_1:-67369574 None:intergenic
ATGTTTCAGATTGCTCTATC+AGG 0.403238 4_1:+67365064 Msa0566310:intron
ACCTTCGTAAACATCTGAAT+TGG 0.404965 4_1:-67365661 None:intergenic
TTGGAGAAAGAGCTAGGATA+AGG 0.407652 4_1:+67366629 Msa0566310:CDS
ACGAACGCCTTTAGATTCTC+TGG 0.408227 4_1:-67368726 None:intergenic
GAAGGTCAATCTGAGGTATC+TGG 0.410812 4_1:+67366182 Msa0566310:CDS
CAGGGAAAGGGATACTTATA+TGG 0.412305 4_1:+67365499 Msa0566310:CDS
ACAGACATCACGGTATTTCC+GGG 0.414756 4_1:-67369499 None:intergenic
GGGAATAATAGATATACTTC+AGG 0.414956 4_1:+67369349 Msa0566310:CDS
ACGCCTGGACCTCACATTAG+AGG 0.416249 4_1:+67369011 Msa0566310:CDS
CGGTTCCTGCACGCGAAGTT+CGG 0.417255 4_1:+67366596 Msa0566310:CDS
AGCTTCGTCAACGCGACGCC+TGG 0.420191 4_1:+67368996 Msa0566310:CDS
TCTAAAATACGAATTTCATA+TGG 0.420253 4_1:+67367502 Msa0566310:CDS
AACAACCATCTCTAAAGAAA+TGG 0.425820 4_1:+67365946 Msa0566310:CDS
ATGAATGTTCCTCAGATTGC+CGG 0.428484 4_1:+67369217 Msa0566310:intron
TTAATTTGCAGCTTGGCATC+AGG 0.428757 4_1:+67366387 Msa0566310:CDS
AAGTACGAGGGTGAATTCTC+CGG 0.432618 4_1:+67365534 Msa0566310:CDS
TTAGGTGCGGTTTGTTGTCA+TGG 0.434098 4_1:+67367361 Msa0566310:intron
GATCGGTATATGAAGGGGAT+TGG 0.434561 4_1:+67365460 Msa0566310:CDS
GGGATTATGAAGTGGTTTAA+CGG 0.437434 4_1:+67365783 Msa0566310:CDS
TACGAAGGTTTATGGAAAGA+AGG 0.438135 4_1:+67365675 Msa0566310:CDS
GAAGAGAAGTCCTTTACAAA+TGG 0.438715 4_1:+67365369 Msa0566310:CDS
TCAATCTGAGGTATCTGGTA+TGG 0.440557 4_1:+67366187 Msa0566310:CDS
AATTGATTACAGTCTTCTGT+TGG 0.443015 4_1:+67368686 Msa0566310:CDS
CCCTCGTACTTTGCTCCTGA+TGG 0.449131 4_1:-67365522 None:intergenic
ACTGTTCTGTAGACTTCTAC+TGG 0.449316 4_1:+67366692 Msa0566310:CDS
GGAAAATTTACTTGGAATGA+TGG 0.451266 4_1:+67365714 Msa0566310:CDS
ATGAATGCTCATCACGGGAT+TGG 0.454271 4_1:+67365624 Msa0566310:CDS
CGACATATGCAATCGTCAGC+AGG 0.456001 4_1:-67366125 None:intergenic
CGAACTTCGCGTGCAGGAAC+CGG 0.457813 4_1:-67366595 None:intergenic
GATAATAGCTTCGGCGGTGT+TGG 0.458656 4_1:-67366358 None:intergenic
AAGGCGTTCGTCGAACCTCC+TGG 0.464255 4_1:+67368738 Msa0566310:CDS
ATCAAACTGCAGTGATTTGT+AGG 0.464399 4_1:-67369402 None:intergenic
GCAACTAACAACAAGCCTTT+CGG 0.464606 4_1:-67368963 None:intergenic
AAGGCAGCGGAAAATTTACT+TGG 0.465244 4_1:+67365706 Msa0566310:CDS
CTGAAGCTTAATTTGCAGCT+TGG 0.465574 4_1:+67366380 Msa0566310:CDS
ATTGATTACAGTCTTCTGTT+GGG 0.467533 4_1:+67368687 Msa0566310:CDS
GGTATACTTCCCCACGGCAA+TGG 0.471692 4_1:+67365417 Msa0566310:CDS
ATTCTCATCGCTATGAAGAT+TGG 0.475717 4_1:-67365973 None:intergenic
GGGATACTTATATGGCCATC+AGG 0.475813 4_1:+67365507 Msa0566310:CDS
GAAAATAAGTATCCTGTGAC+AGG 0.476368 4_1:-67364370 None:intergenic
TAAGCTTCAGATAATAGCTT+CGG 0.480311 4_1:-67366367 None:intergenic
TAGAGCACAATCACCACAAA+TGG 0.481172 4_1:-67366923 None:intergenic
AAATACTCACCTTGCAGTAC+CGG 0.481918 4_1:-67369087 None:intergenic
TTTGTAATTAATTGTTCCAA+AGG 0.483454 4_1:+67369558 Msa0566310:three_prime_UTR
TCATAGCGATGAGAATTGTA+AGG 0.484127 4_1:+67365980 Msa0566310:CDS
TGTCTACATTGGTAAATTCA+AGG 0.485501 4_1:+67365395 Msa0566310:CDS
TCTGTTACTGATATAGTCAT+AGG 0.486890 4_1:-67369425 None:intergenic
GTATACTTCCCCACGGCAAT+GGG 0.486894 4_1:+67365418 Msa0566310:CDS
CTGGAAAGATTATTGCCCTA+TGG 0.492808 4_1:+67366711 Msa0566310:CDS
AATGGACTTAGACAAGGATC+TGG 0.498528 4_1:+67365831 Msa0566310:CDS
CTAAAGGACATATCTTCAGC+TGG 0.501585 4_1:+67366943 Msa0566310:CDS
CACCTCTCAGTGTTATTCGA+TGG 0.502502 4_1:-67367254 None:intergenic
TTTCATAACTTCCTACATGA+TGG 0.502637 4_1:-67367203 None:intergenic
TATATTGGAACATGGAGTAA+AGG 0.502815 4_1:+67365882 Msa0566310:CDS
TTGTGGTGATTGTGCTCTAA+AGG 0.503067 4_1:+67366927 Msa0566310:CDS
TATAGTTTACCTTCTGCAGA+TGG 0.505853 4_1:+67368777 Msa0566310:CDS
TAGGTGCGGTTTGTTGTCAT+GGG 0.512383 4_1:+67367362 Msa0566310:intron
TTCTCCGGGAATTATCTTCA+CGG 0.513714 4_1:+67365549 Msa0566310:CDS
GAAGGAATTCGCGAAGGCAG+CGG 0.514143 4_1:+67365693 Msa0566310:CDS
TTATGATGTGGTACTCTACA+TGG 0.514200 4_1:+67369328 Msa0566310:CDS
GTACACCATTTCTTTAGAGA+TGG 0.515782 4_1:-67365951 None:intergenic
GGTCTGCGATAACGCGGATG+AGG 0.519666 4_1:-67366153 None:intergenic
CACTAGATTTACTCAAACAA+GGG 0.520368 4_1:+67368925 Msa0566310:intron
GACGACCGAACTTCGCGTGC+AGG 0.520685 4_1:-67366601 None:intergenic
ATCAACTTCCTTGTTACCGA+TGG 0.520731 4_1:-67369054 None:intergenic
TTCCCTCTAATGTGAGGTCC+AGG 0.521447 4_1:-67369014 None:intergenic
GATAAGGATGTACTTTCCTA+AGG 0.524503 4_1:+67366645 Msa0566310:CDS
AAAGGCCTAAAGGACGGAAA+AGG 0.524731 4_1:+67365900 Msa0566310:CDS
GGCGTCGCGTTGACGAAGCT+CGG 0.526121 4_1:-67368993 None:intergenic
GTCAATTGTGAACCCTCCTT+AGG 0.529080 4_1:-67366661 None:intergenic
CGCCTGGACCTCACATTAGA+GGG 0.534333 4_1:+67369012 Msa0566310:CDS
TACTGACGCTGTATTGCTCC+AGG 0.536520 4_1:-67368756 None:intergenic
AATGAATACCTGAAGACCAT+AGG 0.538150 4_1:-67366727 None:intergenic
TCAGATGGATCGGTATATGA+AGG 0.538278 4_1:+67365453 Msa0566310:CDS
CAATCTGAGGTATCTGGTAT+GGG 0.541389 4_1:+67366188 Msa0566310:CDS
TAGAGCTCCAGAGAATCTAA+AGG 0.546858 4_1:+67368719 Msa0566310:CDS
TGTGTACTTCCCATTGCCGT+GGG 0.548578 4_1:-67365427 None:intergenic
CCTAAATACTACCATCATGT+AGG 0.550012 4_1:+67367192 Msa0566310:CDS
GTCTACATTGGTAAATTCAA+GGG 0.551103 4_1:+67365396 Msa0566310:CDS
AAGGATGTACTTTCCTAAGG+AGG 0.552053 4_1:+67366648 Msa0566310:CDS
CCATCGTCGTTACGATCTGA+AGG 0.555421 4_1:+67367412 Msa0566310:CDS
GGGAATTATCTTCACGGTCA+CGG 0.556927 4_1:+67365555 Msa0566310:CDS
TGGAGGATGAATGCTCATCA+CGG 0.558790 4_1:+67365618 Msa0566310:CDS
GTAGACATCACCATTTGTAA+AGG 0.559629 4_1:-67365379 None:intergenic
AGTACGAGGGTGAATTCTCC+GGG 0.560472 4_1:+67365535 Msa0566310:CDS
ATGTTTACTCCTAATTGCAC+CGG 0.562596 4_1:-67369236 None:intergenic
ATGTGTACTTCCCATTGCCG+TGG 0.562750 4_1:-67365428 None:intergenic
ACAAATGGTGATGTCTACAT+TGG 0.565018 4_1:+67365384 Msa0566310:CDS
ATGAATACCTGAAGACCATA+GGG 0.565904 4_1:-67366726 None:intergenic
GGGAAGTACACATGGTCAGA+TGG 0.568823 4_1:+67365438 Msa0566310:CDS
CAGTGATATTCTGTTAGTCA+TGG 0.568846 4_1:+67365198 Msa0566310:exon
AGCATACTCCATCGGTAACA+AGG 0.571690 4_1:+67369046 Msa0566310:CDS
GCACTAGATTTACTCAAACA+AGG 0.574901 4_1:+67368924 Msa0566310:intron
GTGACCGTGAAGATAATTCC+CGG 0.575363 4_1:-67365553 None:intergenic
GTACACATGGTCAGATGGAT+CGG 0.577176 4_1:+67365443 Msa0566310:CDS
GATGGTTGTTTGCTACCAGA+AGG 0.578528 4_1:-67365933 None:intergenic
GGAGGATGAATGCTCATCAC+GGG 0.578586 4_1:+67365619 Msa0566310:CDS
CAGATGGATCGGTATATGAA+GGG 0.578591 4_1:+67365454 Msa0566310:CDS
TTATCGCAGACCTCTAATGA+AGG 0.580718 4_1:+67366164 Msa0566310:CDS
AACATGGAGTAAAGGCCTAA+AGG 0.583252 4_1:+67365890 Msa0566310:CDS
AAAAGGGAAAATAGATGGAA+GGG 0.584921 4_1:+67365761 Msa0566310:CDS
CCTTCAGATCGTAACGACGA+TGG 0.585986 4_1:-67367412 None:intergenic
TTCGAAAGGGAATATATGCA+AGG 0.587505 4_1:+67366221 Msa0566310:CDS
AATACTCACCTTGCAGTACC+GGG 0.588020 4_1:-67369086 None:intergenic
GATCTGAAGGGATCTTCTCA+AGG 0.588048 4_1:+67367425 Msa0566310:CDS
AACGGCTGTGTTTACACAGG+TGG 0.594060 4_1:+67365594 Msa0566310:CDS
TCCAATTCAGATGTTTACGA+AGG 0.595150 4_1:+67365660 Msa0566310:CDS
AAAGGGAAAATAGATGGAAG+GGG 0.596052 4_1:+67365762 Msa0566310:CDS
AGGATGTACTTTCCTAAGGA+GGG 0.596234 4_1:+67366649 Msa0566310:CDS
ATCGAATAACACTGAGAGGT+GGG 0.596556 4_1:+67367256 Msa0566310:CDS
AGCAAACTAGTAGCTTGAGC+CGG 0.603192 4_1:-67369260 None:intergenic
GAGTACATGATGTCCATTTG+TGG 0.605960 4_1:+67366910 Msa0566310:CDS
ATTAGAGGTCTGCGATAACG+CGG 0.609836 4_1:-67366159 None:intergenic
TGGTTAAATGGACTTAGACA+AGG 0.611568 4_1:+67365825 Msa0566310:CDS
GACATATGCAATCGTCAGCA+GGG 0.613342 4_1:-67366124 None:intergenic
ACAAATGGACATCATGTACT+CGG 0.617112 4_1:-67366908 None:intergenic
CATCGAATAACACTGAGAGG+TGG 0.622054 4_1:+67367255 Msa0566310:CDS
TAGTTTGCTTCAAGAAGACA+AGG 0.625211 4_1:+67369274 Msa0566310:CDS
ATATACTAACCATCTGCAGA+AGG 0.625385 4_1:-67368786 None:intergenic
TAGTCATGGAGGACAATGGA+AGG 0.627575 4_1:+67365212 Msa0566310:exon
CTGTTAGTCATGGAGGACAA+TGG 0.628155 4_1:+67365208 Msa0566310:exon
GGCACATTCGCAAAATCGAA+CGG 0.628854 4_1:+67365576 Msa0566310:CDS
TCAATTCTCAGGTACACTGT+AGG 0.629207 4_1:+67366562 Msa0566310:intron
GCTTCAGATAATAGCTTCGG+CGG 0.629314 4_1:-67366364 None:intergenic
CTCTAATGAAGGTCAATCTG+AGG 0.630043 4_1:+67366175 Msa0566310:CDS
GCTGTGTTTACACAGGTGGA+TGG 0.631848 4_1:+67365598 Msa0566310:CDS
AAGGGAAAATAGATGGAAGG+GGG 0.634233 4_1:+67365763 Msa0566310:CDS
TGGAGTAAAGGCCTAAAGGA+CGG 0.638246 4_1:+67365894 Msa0566310:CDS
TGGAAAGAAGGAATTCGCGA+AGG 0.641463 4_1:+67365687 Msa0566310:CDS
TGATATTCTGTTAGTCATGG+AGG 0.641759 4_1:+67365201 Msa0566310:exon
AATGTATTCCCTCTAATGTG+AGG 0.644444 4_1:-67369020 None:intergenic
AGATGGATCGGTATATGAAG+GGG 0.644736 4_1:+67365455 Msa0566310:CDS
GAGGACTTTATATTGGAACA+TGG 0.648337 4_1:+67365874 Msa0566310:CDS
TAACAAATATACAGACATCA+CGG 0.648800 4_1:-67369509 None:intergenic
GCCATCAGGAGCAAAGTACG+AGG 0.650915 4_1:+67365521 Msa0566310:CDS
TATGATGTGGTACTCTACAT+GGG 0.652027 4_1:+67369329 Msa0566310:CDS
GCAATTAGGAGTAAACATGC+CGG 0.652141 4_1:+67369241 Msa0566310:CDS
ACTAGATTTACTCAAACAAG+GGG 0.654789 4_1:+67368926 Msa0566310:intron
TATGCAAGGAGTTCTAATTG+TGG 0.655152 4_1:+67366235 Msa0566310:CDS
AGAAATGTTCAAATTGGACG+CGG 0.655936 4_1:+67366885 Msa0566310:CDS
GAGCAGTTGATCATTCCGAA+AGG 0.659532 4_1:+67368948 Msa0566310:CDS
ACATTGAGAGCATACTCCAT+CGG 0.662326 4_1:+67369038 Msa0566310:CDS
TTCAAGGGTATACTTCCCCA+CGG 0.668280 4_1:+67365411 Msa0566310:CDS
ATCCATCGAATAACACTGAG+AGG 0.670109 4_1:+67367252 Msa0566310:CDS
CATCGTCGTTACGATCTGAA+GGG 0.676822 4_1:+67367413 Msa0566310:CDS
TTTGCTTCAAGAAGACAAGG+TGG 0.679586 4_1:+67369277 Msa0566310:CDS
GTGTTTACACAGGTGGATGG+AGG 0.686316 4_1:+67365601 Msa0566310:CDS
ACGGCAATGGGAAGTACACA+TGG 0.686519 4_1:+67365430 Msa0566310:CDS
AAGTCTACAGAACAGTGTGG+AGG 0.692411 4_1:-67366685 None:intergenic
TAGAAGTCTACAGAACAGTG+TGG 0.705962 4_1:-67366688 None:intergenic
TCGAACGGCTGTGTTTACAC+AGG 0.708881 4_1:+67365591 Msa0566310:CDS
CCATCAGGAGCAAAGTACGA+GGG 0.713174 4_1:+67365522 Msa0566310:CDS
GTGTACTTCCCATTGCCGTG+GGG 0.726031 4_1:-67365426 None:intergenic
TGACGCTGTATTGCTCCAGG+AGG 0.761183 4_1:-67368753 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGATTATTGAAAATAA+TGG + chr4_1:67364881-67364900 Msa0566310:intron 10.0%
!! AACTTAATTAAAAGTTAATA+TGG - chr4_1:67367074-67367093 None:intergenic 10.0%
!!! AATATCTTTTGTTTTATTTA+AGG - chr4_1:67367839-67367858 None:intergenic 10.0%
!! AATAAAAATATTTGTTTCAT+TGG - chr4_1:67367869-67367888 None:intergenic 10.0%
!!! CTATATTTTATATGTAATAA+TGG + chr4_1:67367902-67367921 Msa0566310:intron 10.0%
!!! TTCAATAATCTTTTTATTAG+TGG - chr4_1:67364876-67364895 None:intergenic 15.0%
!! CACTTGAATATTTATTTATT+TGG + chr4_1:67366498-67366517 Msa0566310:intron 15.0%
!!! ATATGATTTTATGATTATTG+TGG + chr4_1:67366783-67366802 Msa0566310:intron 15.0%
!!! TATTGCTATTAATTTTATCT+TGG - chr4_1:67367463-67367482 None:intergenic 15.0%
!! TACTAACATAATCATTAAAT+AGG - chr4_1:67367658-67367677 None:intergenic 15.0%
!!! AGTAATACAATTTTACTTTT+TGG + chr4_1:67367738-67367757 Msa0566310:intron 15.0%
!! AATAAAACAAAAGATATTAG+TGG + chr4_1:67367841-67367860 Msa0566310:intron 15.0%
!!! AAAATCATCTGTTTAATTTT+CGG - chr4_1:67368292-67368311 None:intergenic 15.0%
!! ATATAAGTGTAAAGAAATAT+TGG + chr4_1:67368317-67368336 Msa0566310:intron 15.0%
!!! TATTTGTTATCTTTTCATTT+TGG + chr4_1:67369523-67369542 Msa0566310:three_prime_UTR 15.0%
!! AATAAATAACATGTGTATTG+TGG - chr4_1:67364608-67364627 None:intergenic 20.0%
!!! TAATTAGTTTCTTTATTCTC+TGG - chr4_1:67364846-67364865 None:intergenic 20.0%
!! AGATTATTGAAAATAATGGT+TGG + chr4_1:67364885-67364904 Msa0566310:intron 20.0%
!! CAAAACAAAATACAAAACAA+AGG - chr4_1:67365277-67365296 None:intergenic 20.0%
!! TATATTGGAAATTGGAAAAA+AGG + chr4_1:67365744-67365763 Msa0566310:CDS 20.0%
!! ATATTGGAAATTGGAAAAAA+GGG + chr4_1:67365745-67365764 Msa0566310:CDS 20.0%
!! TATCAGAATAACATGTATAT+AGG + chr4_1:67366749-67366768 Msa0566310:intron 20.0%
!! ATTGAAAAAATATGAGCTAA+AGG + chr4_1:67367020-67367039 Msa0566310:CDS 20.0%
!! ACTCTTATTACAAAATTCTT+CGG + chr4_1:67367228-67367247 Msa0566310:CDS 20.0%
!!! AGAAAACAACAAAGTATTTA+TGG - chr4_1:67367338-67367357 None:intergenic 20.0%
!!! TCTAAAATACGAATTTCATA+TGG + chr4_1:67367502-67367521 Msa0566310:CDS 20.0%
!! AAAAGTTACTCTTATAAAGT+AGG - chr4_1:67367563-67367582 None:intergenic 20.0%
!!! ATACAATTTTACTTTTTGGA+CGG + chr4_1:67367742-67367761 Msa0566310:intron 20.0%
!! CATATCATATTCTAAATAAC+TGG - chr4_1:67368821-67368840 None:intergenic 20.0%
!! GATATCAATATATAATCACT+AGG - chr4_1:67368861-67368880 None:intergenic 20.0%
!! TTTGTAATTAATTGTTCCAA+AGG + chr4_1:67369558-67369577 Msa0566310:three_prime_UTR 20.0%
!! CAAATCAATCATATACTAAA+TGG - chr4_1:67369706-67369725 None:intergenic 20.0%
! AAAATCAGATCAAAGAAAGA+TGG - chr4_1:67364517-67364536 None:intergenic 25.0%
! AAGGATTACAGAAAAGTTTA+GGG + chr4_1:67364741-67364760 Msa0566310:intron 25.0%
! GGTAAAAACATCTAAATAAG+TGG + chr4_1:67364906-67364925 Msa0566310:intron 25.0%
! AAAACATCTAAATAAGTGGA+TGG + chr4_1:67364910-67364929 Msa0566310:intron 25.0%
! AAAATTCCAAAGACAGAAAA+AGG - chr4_1:67364941-67364960 None:intergenic 25.0%
!! TGTTTTCAGACTCATTATAT+TGG + chr4_1:67365035-67365054 Msa0566310:intron 25.0%
! GTTTAACCTTTCAAAAGAAA+TGG + chr4_1:67365147-67365166 Msa0566310:five_prime_UTR 25.0%
! TGATTTATTTGGATAACTTC+AGG - chr4_1:67365180-67365199 None:intergenic 25.0%
!!! CAGAATATCACTGATTTATT+TGG - chr4_1:67365191-67365210 None:intergenic 25.0%
!! TAACTGTTTCTTGTTAATGT+AGG + chr4_1:67365343-67365362 Msa0566310:intron 25.0%
!!! AATGATGGAAGTATCTATAT+TGG + chr4_1:67365729-67365748 Msa0566310:CDS 25.0%
!! GAAGTATCTATATTGGAAAT+TGG + chr4_1:67365736-67365755 Msa0566310:CDS 25.0%
! GTAAAGAAGAGTTCAATTAT+AGG + chr4_1:67366329-67366348 Msa0566310:CDS 25.0%
!!! ATTTTTTTTGCTCAATTCTC+AGG + chr4_1:67366551-67366570 Msa0566310:intron 25.0%
! ATGTGATTTCATATATTTCC+AGG + chr4_1:67366854-67366873 Msa0566310:intron 25.0%
! TTTGAGAGAAATGTTCAAAT+TGG + chr4_1:67366879-67366898 Msa0566310:CDS 25.0%
! AATTAAGTACTTAAGAAGTC+AGG - chr4_1:67367128-67367147 None:intergenic 25.0%
! CTCTTATTACAAAATTCTTC+GGG + chr4_1:67367229-67367248 Msa0566310:CDS 25.0%
! AAGAAGTAAAGACAGATATT+AGG - chr4_1:67367294-67367313 None:intergenic 25.0%
! TATGGTTAAACCAATTAACA+AGG - chr4_1:67367320-67367339 None:intergenic 25.0%
!!! GTTAGTATTTTATTTCCCAT+AGG + chr4_1:67367671-67367690 Msa0566310:intron 25.0%
!! ACTATCAAAATCTGAAATTG+TGG - chr4_1:67368461-67368480 None:intergenic 25.0%
!!! TTTCAGATTTTGATAGTACT+TGG + chr4_1:67368464-67368483 Msa0566310:intron 25.0%
! AATATATAATCACTAGGCTT+GGG - chr4_1:67368855-67368874 None:intergenic 25.0%
!! AAACGTTCAGCATAAATTTT+AGG - chr4_1:67369452-67369471 None:intergenic 25.0%
! CATCAATTTCATGGATAAAA+AGG + chr4_1:67369472-67369491 Msa0566310:CDS 25.0%
! TAACAAATATACAGACATCA+CGG - chr4_1:67369512-67369531 None:intergenic 25.0%
! AATTCAAACAGCTCAATAAA+AGG + chr4_1:67369672-67369691 Msa0566310:three_prime_UTR 25.0%
! TCACATGACACTTAATTATT+TGG + chr4_1:67369736-67369755 Msa0566310:three_prime_UTR 25.0%
! CACATGACACTTAATTATTT+GGG + chr4_1:67369737-67369756 Msa0566310:three_prime_UTR 25.0%
TGACAGGAATAAAAACTGAA+AGG - chr4_1:67364357-67364376 None:intergenic 30.0%
!! AGGATACTTATTTTCATCCA+AGG + chr4_1:67364378-67364397 Msa0566310:five_prime_UTR 30.0%
! CTTTTCTTTTCTTTCTGTTC+TGG + chr4_1:67364431-67364450 Msa0566310:intron 30.0%
AGTATAGAAACTTCAGAACT+AGG - chr4_1:67364488-67364507 None:intergenic 30.0%
TGAAACAATACATGCATGTT+GGG - chr4_1:67364635-67364654 None:intergenic 30.0%
! TTTTCTGTAATCCTTGTTAG+GGG - chr4_1:67364736-67364755 None:intergenic 30.0%
! CTTTTCTGTAATCCTTGTTA+GGG - chr4_1:67364737-67364756 None:intergenic 30.0%
! ACTTTTCTGTAATCCTTGTT+AGG - chr4_1:67364738-67364757 None:intergenic 30.0%
CAAGGATTACAGAAAAGTTT+AGG + chr4_1:67364740-67364759 Msa0566310:intron 30.0%
!!! TTTCTGTCTTTGGAATTTTG+TGG + chr4_1:67364942-67364961 Msa0566310:intron 30.0%
!!! TTCTGTCTTTGGAATTTTGT+GGG + chr4_1:67364943-67364962 Msa0566310:intron 30.0%
! TCAACACTAAAGAATGCTTT+TGG - chr4_1:67364977-67364996 None:intergenic 30.0%
! TTAGTGTTGAAACCTGTTAA+AGG + chr4_1:67364987-67365006 Msa0566310:intron 30.0%
ACAACAATGAATCCTTTAAC+AGG - chr4_1:67365002-67365021 None:intergenic 30.0%
!!! AATGTGCCATTTCTTTTGAA+AGG - chr4_1:67365156-67365175 None:intergenic 30.0%
CAAAACAAAGGAGAATGAAT+AGG - chr4_1:67365265-67365284 None:intergenic 30.0%
TGTCTACATTGGTAAATTCA+AGG + chr4_1:67365395-67365414 Msa0566310:CDS 30.0%
GTCTACATTGGTAAATTCAA+GGG + chr4_1:67365396-67365415 Msa0566310:CDS 30.0%
GGAAAATTTACTTGGAATGA+TGG + chr4_1:67365714-67365733 Msa0566310:CDS 30.0%
TGGAAAAAAGGGAAAATAGA+TGG + chr4_1:67365756-67365775 Msa0566310:CDS 30.0%
AAAAAGGGAAAATAGATGGA+AGG + chr4_1:67365760-67365779 Msa0566310:CDS 30.0%
AAAAGGGAAAATAGATGGAA+GGG + chr4_1:67365761-67365780 Msa0566310:CDS 30.0%
! TTTGATGGTTGTTGGTTAAA+TGG + chr4_1:67365813-67365832 Msa0566310:CDS 30.0%
! GGAGTTTATAGATTTTCAGA+TGG + chr4_1:67365852-67365871 Msa0566310:CDS 30.0%
! GTTTATAGATTTTCAGATGG+AGG + chr4_1:67365855-67365874 Msa0566310:CDS 30.0%
TATATTGGAACATGGAGTAA+AGG + chr4_1:67365882-67365901 Msa0566310:CDS 30.0%
! AACAACCATCTCTAAAGAAA+TGG + chr4_1:67365946-67365965 Msa0566310:CDS 30.0%
CTACGGTTAAATCTTGAATT+TGG - chr4_1:67366008-67366027 None:intergenic 30.0%
! ATCTCAAAGTACTTCATTGT+TGG + chr4_1:67366079-67366098 Msa0566310:CDS 30.0%
TAAGCTTCAGATAATAGCTT+CGG - chr4_1:67366370-67366389 None:intergenic 30.0%
TTTCATAACTTCCTACATGA+TGG - chr4_1:67367206-67367225 None:intergenic 30.0%
ACTTCTTTCTCCTTGTTAAT+TGG + chr4_1:67367307-67367326 Msa0566310:intron 30.0%
!!! ACTTTGTTGTTTTCTTCGTT+AGG + chr4_1:67367343-67367362 Msa0566310:intron 30.0%
! AGTAGTAAAGCATTTCCTAT+GGG - chr4_1:67367689-67367708 None:intergenic 30.0%
! AAGTAGTAAAGCATTTCCTA+TGG - chr4_1:67367690-67367709 None:intergenic 30.0%
! CTTTGTTATCGTAAGTACTA+TGG + chr4_1:67367707-67367726 Msa0566310:intron 30.0%
CTAATAATACTGGCACAATA+TGG + chr4_1:67367766-67367785 Msa0566310:intron 30.0%
ATTTGTGAGGGATATCAATA+AGG - chr4_1:67368006-67368025 None:intergenic 30.0%
TCTCTCTATTTGTAAAGCTT+TGG - chr4_1:67368157-67368176 None:intergenic 30.0%
ATCTCTTATTGACAGTATCA+TGG + chr4_1:67368241-67368260 Msa0566310:intron 30.0%
!!! ATGACCTGACTTTATTTTTC+TGG + chr4_1:67368616-67368635 Msa0566310:intron 30.0%
TGAACCAGAAAAATAAAGTC+AGG - chr4_1:67368623-67368642 None:intergenic 30.0%
!!! TGACTTTATTTTTCTGGTTC+AGG + chr4_1:67368622-67368641 Msa0566310:intron 30.0%
AATTGATTACAGTCTTCTGT+TGG + chr4_1:67368686-67368705 Msa0566310:CDS 30.0%
ATTGATTACAGTCTTCTGTT+GGG + chr4_1:67368687-67368706 Msa0566310:CDS 30.0%
CAATATATAATCACTAGGCT+TGG - chr4_1:67368856-67368875 None:intergenic 30.0%
CACTAGATTTACTCAAACAA+GGG + chr4_1:67368925-67368944 Msa0566310:intron 30.0%
ACTAGATTTACTCAAACAAG+GGG + chr4_1:67368926-67368945 Msa0566310:intron 30.0%
GAACTTAAGATCACTAAACT+AGG + chr4_1:67369151-67369170 Msa0566310:intron 30.0%
GGGAATAATAGATATACTTC+AGG + chr4_1:67369349-67369368 Msa0566310:CDS 30.0%
TCTGTTACTGATATAGTCAT+AGG - chr4_1:67369428-67369447 None:intergenic 30.0%
TGAACGTTTCATCAATTTCA+TGG + chr4_1:67369463-67369482 Msa0566310:CDS 30.0%
GTACATAATCATTCATCCTT+TGG - chr4_1:67369577-67369596 None:intergenic 30.0%
!! TGAGATTTGTTTTTCCTGTT+TGG + chr4_1:67369635-67369654 Msa0566310:three_prime_UTR 30.0%
! TCAGTTTTTATTCCTGTCAC+AGG + chr4_1:67364358-67364377 Msa0566310:five_prime_UTR 35.0%
GAAAATAAGTATCCTGTGAC+AGG - chr4_1:67364373-67364392 None:intergenic 35.0%
CTGAAACAATACATGCATGT+TGG - chr4_1:67364636-67364655 None:intergenic 35.0%
CAACATGCATGTATTGTTTC+AGG + chr4_1:67364634-67364653 Msa0566310:intron 35.0%
GAGTGTAATCAACATCACAA+AGG - chr4_1:67364714-67364733 None:intergenic 35.0%
TTCCAAAGACAGAAAAAGGA+GGG - chr4_1:67364937-67364956 None:intergenic 35.0%
ATTCCAAAGACAGAAAAAGG+AGG - chr4_1:67364938-67364957 None:intergenic 35.0%
ATGTTTCAGATTGCTCTATC+AGG + chr4_1:67365064-67365083 Msa0566310:intron 35.0%
ATCAGGTCACAATAAAAAGC+TGG + chr4_1:67365081-67365100 Msa0566310:five_prime_UTR 35.0%
CAGTGATATTCTGTTAGTCA+TGG + chr4_1:67365198-67365217 Msa0566310:exon 35.0%
TGATATTCTGTTAGTCATGG+AGG + chr4_1:67365201-67365220 Msa0566310:exon 35.0%
GAAGAGAAGTCCTTTACAAA+TGG + chr4_1:67365369-67365388 Msa0566310:CDS 35.0%
GTAGACATCACCATTTGTAA+AGG - chr4_1:67365382-67365401 None:intergenic 35.0%
! ACAAATGGTGATGTCTACAT+TGG + chr4_1:67365384-67365403 Msa0566310:CDS 35.0%
TGGATAGATGGAAAAATGAC+AGG + chr4_1:67365480-67365499 Msa0566310:CDS 35.0%
GGATAGATGGAAAAATGACA+GGG + chr4_1:67365481-67365500 Msa0566310:CDS 35.0%
ATGGAAAAATGACAGGGAAA+GGG + chr4_1:67365487-67365506 Msa0566310:CDS 35.0%
TCCAATTCAGATGTTTACGA+AGG + chr4_1:67365660-67365679 Msa0566310:CDS 35.0%
ACCTTCGTAAACATCTGAAT+TGG - chr4_1:67365664-67365683 None:intergenic 35.0%
CAGATGTTTACGAAGGTTTA+TGG + chr4_1:67365667-67365686 Msa0566310:CDS 35.0%
TACGAAGGTTTATGGAAAGA+AGG + chr4_1:67365675-67365694 Msa0566310:CDS 35.0%
AAAGGGAAAATAGATGGAAG+GGG + chr4_1:67365762-67365781 Msa0566310:CDS 35.0%
GGGATTATGAAGTGGTTTAA+CGG + chr4_1:67365783-67365802 Msa0566310:CDS 35.0%
!! TTTAACGGCGATGTTTTTGA+TGG + chr4_1:67365798-67365817 Msa0566310:CDS 35.0%
! TGGTTAAATGGACTTAGACA+AGG + chr4_1:67365825-67365844 Msa0566310:CDS 35.0%
TCAGATGGAGGACTTTATAT+TGG + chr4_1:67365867-67365886 Msa0566310:CDS 35.0%
GAGGACTTTATATTGGAACA+TGG + chr4_1:67365874-67365893 Msa0566310:CDS 35.0%
AAAGGAACATTCTATCCTTC+TGG + chr4_1:67365918-67365937 Msa0566310:CDS 35.0%
! GTACACCATTTCTTTAGAGA+TGG - chr4_1:67365954-67365973 None:intergenic 35.0%
ATTCTCATCGCTATGAAGAT+TGG - chr4_1:67365976-67365995 None:intergenic 35.0%
TCATAGCGATGAGAATTGTA+AGG + chr4_1:67365980-67365999 Msa0566310:CDS 35.0%
! TGGGTAATATGGTTTTCGAA+AGG + chr4_1:67366207-67366226 Msa0566310:CDS 35.0%
! GGGTAATATGGTTTTCGAAA+GGG + chr4_1:67366208-67366227 Msa0566310:CDS 35.0%
TTCGAAAGGGAATATATGCA+AGG + chr4_1:67366221-67366240 Msa0566310:CDS 35.0%
! TATGCAAGGAGTTCTAATTG+TGG + chr4_1:67366235-67366254 Msa0566310:CDS 35.0%
CACTGTAGGAAAAATTACAC+CGG + chr4_1:67366576-67366595 Msa0566310:CDS 35.0%
GATAAGGATGTACTTTCCTA+AGG + chr4_1:67366645-67366664 Msa0566310:CDS 35.0%
ATGAATACCTGAAGACCATA+GGG - chr4_1:67366729-67366748 None:intergenic 35.0%
AATGAATACCTGAAGACCAT+AGG - chr4_1:67366730-67366749 None:intergenic 35.0%
GAACATTTCTCTCAAATTCC+TGG - chr4_1:67366875-67366894 None:intergenic 35.0%
AGAAATGTTCAAATTGGACG+CGG + chr4_1:67366885-67366904 Msa0566310:CDS 35.0%
ACAAATGGACATCATGTACT+CGG - chr4_1:67366911-67366930 None:intergenic 35.0%
ATATCTTCAGCTGGAAAAAG+TGG + chr4_1:67366952-67366971 Msa0566310:CDS 35.0%
ACCTATAACAAGAGGAATGT+AGG - chr4_1:67367156-67367175 None:intergenic 35.0%
CCTACATGATGGTAGTATTT+AGG - chr4_1:67367195-67367214 None:intergenic 35.0%
CCTAAATACTACCATCATGT+AGG + chr4_1:67367192-67367211 Msa0566310:CDS 35.0%
! TGTAGCAATTTTGCTCTTCT+AGG + chr4_1:67367618-67367637 Msa0566310:intron 35.0%
!! TTTGGACGGACTAATAATAC+TGG + chr4_1:67367756-67367775 Msa0566310:intron 35.0%
AGGTATTTCGATTCATTGCT+GGG - chr4_1:67367986-67368005 None:intergenic 35.0%
! AAGGTATTTCGATTCATTGC+TGG - chr4_1:67367987-67368006 None:intergenic 35.0%
ATATCCCTCACAAATTGATG+CGG + chr4_1:67368011-67368030 Msa0566310:intron 35.0%
!! CTGATGAGAAATTGATAGTG+AGG + chr4_1:67368056-67368075 Msa0566310:intron 35.0%
!!! GCTTGTGGATATTTTAACCA+AGG - chr4_1:67368093-67368112 None:intergenic 35.0%
TGGTTAAAATATCCACAAGC+CGG + chr4_1:67368093-67368112 Msa0566310:intron 35.0%
GACAGTATCATGGTAGTAAT+AGG + chr4_1:67368251-67368270 Msa0566310:intron 35.0%
TCGCTAAAATTTGCAATAGC+AGG - chr4_1:67368378-67368397 None:intergenic 35.0%
AATTACTTTCCCTTCAGACA+AGG - chr4_1:67368579-67368598 None:intergenic 35.0%
TGAAGGGAAAGTAATTTACC+TGG + chr4_1:67368583-67368602 Msa0566310:intron 35.0%
TATAGTTTACCTTCTGCAGA+TGG + chr4_1:67368777-67368796 Msa0566310:CDS 35.0%
ATATACTAACCATCTGCAGA+AGG - chr4_1:67368789-67368808 None:intergenic 35.0%
TTCTAAATAACTGGCATCAG+AGG - chr4_1:67368812-67368831 None:intergenic 35.0%
GCACTAGATTTACTCAAACA+AGG + chr4_1:67368924-67368943 Msa0566310:intron 35.0%
AATGTATTCCCTCTAATGTG+AGG - chr4_1:67369023-67369042 None:intergenic 35.0%
ATGTTTACTCCTAATTGCAC+CGG - chr4_1:67369239-67369258 None:intergenic 35.0%
!! TAGTTTGCTTCAAGAAGACA+AGG + chr4_1:67369274-67369293 Msa0566310:CDS 35.0%
TTATGATGTGGTACTCTACA+TGG + chr4_1:67369328-67369347 Msa0566310:CDS 35.0%
TATGATGTGGTACTCTACAT+GGG + chr4_1:67369329-67369348 Msa0566310:CDS 35.0%
! ATCAAACTGCAGTGATTTGT+AGG - chr4_1:67369405-67369424 None:intergenic 35.0%
!! CATGGATAAAAAGGTATTCC+CGG + chr4_1:67369481-67369500 Msa0566310:CDS 35.0%
! TTTTTCCTGTTTGGCAAAAG+AGG + chr4_1:67369644-67369663 Msa0566310:three_prime_UTR 35.0%
GAGAAAGATTGAAGTGACCT+TGG - chr4_1:67364398-67364417 None:intergenic 40.0%
TTGATTACACTCCCCTAACA+AGG + chr4_1:67364722-67364741 Msa0566310:intron 40.0%
AGGTCACAATAAAAAGCTGG+TGG + chr4_1:67365084-67365103 Msa0566310:five_prime_UTR 40.0%
TCAGATGGATCGGTATATGA+AGG + chr4_1:67365453-67365472 Msa0566310:CDS 40.0%
CAGATGGATCGGTATATGAA+GGG + chr4_1:67365454-67365473 Msa0566310:CDS 40.0%
AGATGGATCGGTATATGAAG+GGG + chr4_1:67365455-67365474 Msa0566310:CDS 40.0%
TATGAAGGGGATTGGATAGA+TGG + chr4_1:67365468-67365487 Msa0566310:CDS 40.0%
GATGGAAAAATGACAGGGAA+AGG + chr4_1:67365486-67365505 Msa0566310:CDS 40.0%
CAGGGAAAGGGATACTTATA+TGG + chr4_1:67365499-67365518 Msa0566310:CDS 40.0%
TTCTCCGGGAATTATCTTCA+CGG + chr4_1:67365549-67365568 Msa0566310:CDS 40.0%
AAGGCAGCGGAAAATTTACT+TGG + chr4_1:67365706-67365725 Msa0566310:CDS 40.0%
AAGGGAAAATAGATGGAAGG+GGG + chr4_1:67365763-67365782 Msa0566310:CDS 40.0%
!! GCGATGTTTTTGATGGTTGT+TGG + chr4_1:67365805-67365824 Msa0566310:CDS 40.0%
! AATGGACTTAGACAAGGATC+TGG + chr4_1:67365831-67365850 Msa0566310:CDS 40.0%
AACATGGAGTAAAGGCCTAA+AGG + chr4_1:67365890-67365909 Msa0566310:CDS 40.0%
! ATGTTCCTTTTCCGTCCTTT+AGG - chr4_1:67365908-67365927 None:intergenic 40.0%
!!! GAGCTTTTTCAGAGAGACTA+CGG - chr4_1:67366025-67366044 None:intergenic 40.0%
! TGAACTTTTCGATCTACCAC+TGG - chr4_1:67366051-67366070 None:intergenic 40.0%
TTATCGCAGACCTCTAATGA+AGG + chr4_1:67366164-67366183 Msa0566310:CDS 40.0%
CTCAGATTGACCTTCATTAG+AGG - chr4_1:67366177-67366196 None:intergenic 40.0%
CTCTAATGAAGGTCAATCTG+AGG + chr4_1:67366175-67366194 Msa0566310:CDS 40.0%
! TCAATCTGAGGTATCTGGTA+TGG + chr4_1:67366187-67366206 Msa0566310:CDS 40.0%
! CAATCTGAGGTATCTGGTAT+GGG + chr4_1:67366188-67366207 Msa0566310:CDS 40.0%
GGTATCTGGTATGGGTAATA+TGG + chr4_1:67366196-67366215 Msa0566310:CDS 40.0%
!! CTGAAGCTTAATTTGCAGCT+TGG + chr4_1:67366380-67366399 Msa0566310:CDS 40.0%
!! TTAATTTGCAGCTTGGCATC+AGG + chr4_1:67366387-67366406 Msa0566310:CDS 40.0%
TCAATTCTCAGGTACACTGT+AGG + chr4_1:67366562-67366581 Msa0566310:intron 40.0%
!! CTGATTTTGGAGAAAGAGCT+AGG + chr4_1:67366623-67366642 Msa0566310:CDS 40.0%
TTGGAGAAAGAGCTAGGATA+AGG + chr4_1:67366629-67366648 Msa0566310:CDS 40.0%
AAGGATGTACTTTCCTAAGG+AGG + chr4_1:67366648-67366667 Msa0566310:CDS 40.0%
AGGATGTACTTTCCTAAGGA+GGG + chr4_1:67366649-67366668 Msa0566310:CDS 40.0%
TAGAAGTCTACAGAACAGTG+TGG - chr4_1:67366691-67366710 None:intergenic 40.0%
ACTGTTCTGTAGACTTCTAC+TGG + chr4_1:67366692-67366711 Msa0566310:CDS 40.0%
CTGGAAAGATTATTGCCCTA+TGG + chr4_1:67366711-67366730 Msa0566310:CDS 40.0%
ATTATTGCCCTATGGTCTTC+AGG + chr4_1:67366719-67366738 Msa0566310:CDS 40.0%
GAGTACATGATGTCCATTTG+TGG + chr4_1:67366910-67366929 Msa0566310:CDS 40.0%
TAGAGCACAATCACCACAAA+TGG - chr4_1:67366926-67366945 None:intergenic 40.0%
TTGTGGTGATTGTGCTCTAA+AGG + chr4_1:67366927-67366946 Msa0566310:CDS 40.0%
CTAAAGGACATATCTTCAGC+TGG + chr4_1:67366943-67366962 Msa0566310:CDS 40.0%
! TAGTCACCTCTTTTGCTTGA+TGG + chr4_1:67367047-67367066 Msa0566310:intron 40.0%
TATGGTCCATCAAGCAAAAG+AGG - chr4_1:67367056-67367075 None:intergenic 40.0%
! GCCTACATTCCTCTTGTTAT+AGG + chr4_1:67367152-67367171 Msa0566310:intron 40.0%
TGAGCAGAACCTATAACAAG+AGG - chr4_1:67367164-67367183 None:intergenic 40.0%
ATCCATCGAATAACACTGAG+AGG + chr4_1:67367252-67367271 Msa0566310:CDS 40.0%
ATCGAATAACACTGAGAGGT+GGG + chr4_1:67367256-67367275 Msa0566310:CDS 40.0%
!! GTTGTTTTCTTCGTTAGGTG+CGG + chr4_1:67367348-67367367 Msa0566310:intron 40.0%
TTCAGCTTTCTTGCTTTCGT+TGG + chr4_1:67367802-67367821 Msa0566310:intron 40.0%
!! AGAAATTGATAGTGAGGTCG+AGG + chr4_1:67368062-67368081 Msa0566310:intron 40.0%
GGTTAAAATATCCACAAGCC+GGG + chr4_1:67368094-67368113 Msa0566310:intron 40.0%
CTTCGTGCACTCATGAAAAA+AGG + chr4_1:67368194-67368213 Msa0566310:intron 40.0%
TGCAATAGCAGGATCTAACA+AGG - chr4_1:67368367-67368386 None:intergenic 40.0%
TTGAACTTCTCCTTGTCTGA+AGG + chr4_1:67368566-67368585 Msa0566310:intron 40.0%
TGAACTTCTCCTTGTCTGAA+GGG + chr4_1:67368567-67368586 Msa0566310:intron 40.0%
AGGGAAAGTAATTTACCTGG+TGG + chr4_1:67368586-67368605 Msa0566310:intron 40.0%
TTCTCTAGACTGCAAGTTCT+TGG + chr4_1:67368650-67368669 Msa0566310:CDS 40.0%
TAGAGCTCCAGAGAATCTAA+AGG + chr4_1:67368719-67368738 Msa0566310:CDS 40.0%
GCAACTAACAACAAGCCTTT+CGG - chr4_1:67368966-67368985 None:intergenic 40.0%
! ACATTGAGAGCATACTCCAT+CGG + chr4_1:67369038-67369057 Msa0566310:CDS 40.0%
ATCAACTTCCTTGTTACCGA+TGG - chr4_1:67369057-67369076 None:intergenic 40.0%
!! GAAGTTGATCTTTTACTGCC+CGG + chr4_1:67369068-67369087 Msa0566310:CDS 40.0%
AAATACTCACCTTGCAGTAC+CGG - chr4_1:67369090-67369109 None:intergenic 40.0%
GTTCCTAATGTAATAGCGAG+CGG - chr4_1:67369135-67369154 None:intergenic 40.0%
ATGAATGTTCCTCAGATTGC+CGG + chr4_1:67369217-67369236 Msa0566310:intron 40.0%
GCAATTAGGAGTAAACATGC+CGG + chr4_1:67369241-67369260 Msa0566310:CDS 40.0%
TTTGCTTCAAGAAGACAAGG+TGG + chr4_1:67369277-67369296 Msa0566310:CDS 40.0%
! ATCAGAAGTAGAGCTTTTCG+AGG + chr4_1:67369304-67369323 Msa0566310:CDS 40.0%
!! GCTTTTCGAGGTTTATGATG+TGG + chr4_1:67369316-67369335 Msa0566310:CDS 40.0%
TACAGACATCACGGTATTTC+CGG - chr4_1:67369503-67369522 None:intergenic 40.0%
! GTCCCTCCTTTTTCTGTCTT+TGG + chr4_1:67364932-67364951 Msa0566310:intron 45.0%
CTGTTAGTCATGGAGGACAA+TGG + chr4_1:67365208-67365227 Msa0566310:exon 45.0%
TAGTCATGGAGGACAATGGA+AGG + chr4_1:67365212-67365231 Msa0566310:exon 45.0%
! TTCAAGGGTATACTTCCCCA+CGG + chr4_1:67365411-67365430 Msa0566310:CDS 45.0%
GTACACATGGTCAGATGGAT+CGG + chr4_1:67365443-67365462 Msa0566310:CDS 45.0%
GATCGGTATATGAAGGGGAT+TGG + chr4_1:67365460-67365479 Msa0566310:CDS 45.0%
GGGATACTTATATGGCCATC+AGG + chr4_1:67365507-67365526 Msa0566310:CDS 45.0%
AAGTACGAGGGTGAATTCTC+CGG + chr4_1:67365534-67365553 Msa0566310:CDS 45.0%
GTGACCGTGAAGATAATTCC+CGG - chr4_1:67365556-67365575 None:intergenic 45.0%
GGGAATTATCTTCACGGTCA+CGG + chr4_1:67365555-67365574 Msa0566310:CDS 45.0%
GGCACATTCGCAAAATCGAA+CGG + chr4_1:67365576-67365595 Msa0566310:CDS 45.0%
TGGAGGATGAATGCTCATCA+CGG + chr4_1:67365618-67365637 Msa0566310:CDS 45.0%
ATGAATGCTCATCACGGGAT+TGG + chr4_1:67365624-67365643 Msa0566310:CDS 45.0%
TGGAAAGAAGGAATTCGCGA+AGG + chr4_1:67365687-67365706 Msa0566310:CDS 45.0%
ATGGAAGGGGGATTATGAAG+TGG + chr4_1:67365775-67365794 Msa0566310:CDS 45.0%
TGGAGTAAAGGCCTAAAGGA+CGG + chr4_1:67365894-67365913 Msa0566310:CDS 45.0%
AAAGGCCTAAAGGACGGAAA+AGG + chr4_1:67365900-67365919 Msa0566310:CDS 45.0%
! GATGGTTGTTTGCTACCAGA+AGG - chr4_1:67365936-67365955 None:intergenic 45.0%
GACATATGCAATCGTCAGCA+GGG - chr4_1:67366127-67366146 None:intergenic 45.0%
ATTAGAGGTCTGCGATAACG+CGG - chr4_1:67366162-67366181 None:intergenic 45.0%
! GAAGGTCAATCTGAGGTATC+TGG + chr4_1:67366182-67366201 Msa0566310:CDS 45.0%
GCTTCAGATAATAGCTTCGG+CGG - chr4_1:67366367-67366386 None:intergenic 45.0%
! GAAGTTCGGTCGTCTGATTT+TGG + chr4_1:67366610-67366629 Msa0566310:CDS 45.0%
GTCAATTGTGAACCCTCCTT+AGG - chr4_1:67366664-67366683 None:intergenic 45.0%
AAGTCTACAGAACAGTGTGG+AGG - chr4_1:67366688-67366707 None:intergenic 45.0%
! CACCTCTCAGTGTTATTCGA+TGG - chr4_1:67367257-67367276 None:intergenic 45.0%
CATCGAATAACACTGAGAGG+TGG + chr4_1:67367255-67367274 Msa0566310:CDS 45.0%
AACACTGAGAGGTGGGAAAA+AGG + chr4_1:67367263-67367282 Msa0566310:CDS 45.0%
!! TTAGGTGCGGTTTGTTGTCA+TGG + chr4_1:67367361-67367380 Msa0566310:intron 45.0%
!! TAGGTGCGGTTTGTTGTCAT+GGG + chr4_1:67367362-67367381 Msa0566310:intron 45.0%
CATCGTCGTTACGATCTGAA+GGG + chr4_1:67367413-67367432 Msa0566310:CDS 45.0%
GATCTGAAGGGATCTTCTCA+AGG + chr4_1:67367425-67367444 Msa0566310:CDS 45.0%
GCTTTCTTGCTTTCGTTGGT+AGG + chr4_1:67367806-67367825 Msa0566310:intron 45.0%
TGAGTGCACGAAGCATATTG+AGG - chr4_1:67368187-67368206 None:intergenic 45.0%
CAGGTCATATCATAACCACC+AGG - chr4_1:67368604-67368623 None:intergenic 45.0%
ACGAACGCCTTTAGATTCTC+TGG - chr4_1:67368729-67368748 None:intergenic 45.0%
GAGCAGTTGATCATTCCGAA+AGG + chr4_1:67368948-67368967 Msa0566310:CDS 45.0%
AGCATACTCCATCGGTAACA+AGG + chr4_1:67369046-67369065 Msa0566310:CDS 45.0%
AATACTCACCTTGCAGTACC+GGG - chr4_1:67369089-67369108 None:intergenic 45.0%
TTGCCGCTCGCTATTACATT+AGG + chr4_1:67369129-67369148 Msa0566310:intron 45.0%
AGCAAACTAGTAGCTTGAGC+CGG - chr4_1:67369263-67369282 None:intergenic 45.0%
ACAGACATCACGGTATTTCC+GGG - chr4_1:67369502-67369521 None:intergenic 45.0%
!! AAAAAATAAAAATACAATAA+TGG + chr4_1:67367942-67367961 Msa0566310:intron 5.0%
GTATACTTCCCCACGGCAAT+GGG + chr4_1:67365418-67365437 Msa0566310:CDS 50.0%
TGTGTACTTCCCATTGCCGT+GGG - chr4_1:67365430-67365449 None:intergenic 50.0%
ATGTGTACTTCCCATTGCCG+TGG - chr4_1:67365431-67365450 None:intergenic 50.0%
! ACGGCAATGGGAAGTACACA+TGG + chr4_1:67365430-67365449 Msa0566310:CDS 50.0%
! GGGAAGTACACATGGTCAGA+TGG + chr4_1:67365438-67365457 Msa0566310:CDS 50.0%
CCATCAGGAGCAAAGTACGA+GGG + chr4_1:67365522-67365541 Msa0566310:CDS 50.0%
AGTACGAGGGTGAATTCTCC+GGG + chr4_1:67365535-67365554 Msa0566310:CDS 50.0%
TCGAACGGCTGTGTTTACAC+AGG + chr4_1:67365591-67365610 Msa0566310:CDS 50.0%
AACGGCTGTGTTTACACAGG+TGG + chr4_1:67365594-67365613 Msa0566310:CDS 50.0%
GCTGTGTTTACACAGGTGGA+TGG + chr4_1:67365598-67365617 Msa0566310:CDS 50.0%
GTGTTTACACAGGTGGATGG+AGG + chr4_1:67365601-67365620 Msa0566310:CDS 50.0%
GGAGGATGAATGCTCATCAC+GGG + chr4_1:67365619-67365638 Msa0566310:CDS 50.0%
TCTGAAAAAGCTCGAGCCAG+TGG + chr4_1:67366032-67366051 Msa0566310:CDS 50.0%
CGACATATGCAATCGTCAGC+AGG - chr4_1:67366128-67366147 None:intergenic 50.0%
GATAATAGCTTCGGCGGTGT+TGG - chr4_1:67366361-67366380 None:intergenic 50.0%
CCTTCAGATCGTAACGACGA+TGG - chr4_1:67367415-67367434 None:intergenic 50.0%
CCATCGTCGTTACGATCTGA+AGG + chr4_1:67367412-67367431 Msa0566310:CDS 50.0%
CCAGCCGCATCAATTTGTGA+GGG - chr4_1:67368018-67368037 None:intergenic 50.0%
ACCAGCCGCATCAATTTGTG+AGG - chr4_1:67368019-67368038 None:intergenic 50.0%
TACTGACGCTGTATTGCTCC+AGG - chr4_1:67368759-67368778 None:intergenic 50.0%
TTCCCTCTAATGTGAGGTCC+AGG - chr4_1:67369017-67369036 None:intergenic 50.0%
! TTTTACTGCCCGGTACTGCA+AGG + chr4_1:67369078-67369097 Msa0566310:CDS 50.0%
! CTAATTGCACCGGCAATCTG+AGG - chr4_1:67369229-67369248 None:intergenic 50.0%
CTCAGATTGCCGGTGCAATT+AGG + chr4_1:67369227-67369246 Msa0566310:intron 50.0%
! GCAAGCCTCTTTTGCCAAAC+AGG - chr4_1:67369652-67369671 None:intergenic 50.0%
GGTATACTTCCCCACGGCAA+TGG + chr4_1:67365417-67365436 Msa0566310:CDS 55.0%
GTGTACTTCCCATTGCCGTG+GGG - chr4_1:67365429-67365448 None:intergenic 55.0%
GCCATCAGGAGCAAAGTACG+AGG + chr4_1:67365521-67365540 Msa0566310:CDS 55.0%
CCCTCGTACTTTGCTCCTGA+TGG - chr4_1:67365525-67365544 None:intergenic 55.0%
GAAGGAATTCGCGAAGGCAG+CGG + chr4_1:67365693-67365712 Msa0566310:CDS 55.0%
CCCTCACAAATTGATGCGGC+TGG + chr4_1:67368015-67368034 Msa0566310:intron 55.0%
GTGAGGTCGAGGTACAACCT+TGG + chr4_1:67368073-67368092 Msa0566310:intron 55.0%
TGACGCTGTATTGCTCCAGG+AGG - chr4_1:67368756-67368775 None:intergenic 55.0%
ACGCCTGGACCTCACATTAG+AGG + chr4_1:67369011-67369030 Msa0566310:CDS 55.0%
CGCCTGGACCTCACATTAGA+GGG + chr4_1:67369012-67369031 Msa0566310:CDS 55.0%
GGTCTGCGATAACGCGGATG+AGG - chr4_1:67366156-67366175 None:intergenic 60.0%
CGAACTTCGCGTGCAGGAAC+CGG - chr4_1:67366598-67366617 None:intergenic 60.0%
CGGTTCCTGCACGCGAAGTT+CGG + chr4_1:67366596-67366615 Msa0566310:CDS 60.0%
TATCCACAAGCCGGGTTGCG+AGG + chr4_1:67368102-67368121 Msa0566310:intron 60.0%
TCCTCGTTCACCTCGCAACC+CGG - chr4_1:67368115-67368134 None:intergenic 60.0%
! AAGGCGTTCGTCGAACCTCC+TGG + chr4_1:67368738-67368757 Msa0566310:CDS 60.0%
GACGACCGAACTTCGCGTGC+AGG - chr4_1:67366604-67366623 None:intergenic 65.0%
! TCACCTCGCAACCCGGCTTG+TGG - chr4_1:67368108-67368127 None:intergenic 65.0%
! GGCGTCGCGTTGACGAAGCT+CGG - chr4_1:67368996-67369015 None:intergenic 65.0%
AGCTTCGTCAACGCGACGCC+TGG + chr4_1:67368996-67369015 Msa0566310:CDS 65.0%
GCCGGGTTGCGAGGTGAACG+AGG + chr4_1:67368111-67368130 Msa0566310:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 67364314 67369782 67364314 ID=Msa0566310;Name=Msa0566310
chr4_1 mRNA 67364314 67369782 67364314 ID=Msa0566310-mRNA-1;Parent=Msa0566310;Name=Msa0566310-mRNA-1;_AED=0.09;_eAED=0.09;_QI=230|1|1|1|0.88|0.8|10|268|766
chr4_1 exon 67364314 67364399 67364314 ID=Msa0566310-mRNA-1:exon:22071;Parent=Msa0566310-mRNA-1
chr4_1 exon 67365073 67365233 67365073 ID=Msa0566310-mRNA-1:exon:22072;Parent=Msa0566310-mRNA-1
chr4_1 exon 67365365 67366408 67365365 ID=Msa0566310-mRNA-1:exon:22073;Parent=Msa0566310-mRNA-1
chr4_1 exon 67366573 67366740 67366573 ID=Msa0566310-mRNA-1:exon:22074;Parent=Msa0566310-mRNA-1
chr4_1 exon 67366876 67367041 67366876 ID=Msa0566310-mRNA-1:exon:22075;Parent=Msa0566310-mRNA-1
chr4_1 exon 67367174 67367284 67367174 ID=Msa0566310-mRNA-1:exon:22076;Parent=Msa0566310-mRNA-1
chr4_1 exon 67367365 67367552 67367365 ID=Msa0566310-mRNA-1:exon:22077;Parent=Msa0566310-mRNA-1
chr4_1 exon 67368644 67368798 67368644 ID=Msa0566310-mRNA-1:exon:22078;Parent=Msa0566310-mRNA-1
chr4_1 exon 67368931 67369099 67368931 ID=Msa0566310-mRNA-1:exon:22079;Parent=Msa0566310-mRNA-1
chr4_1 exon 67369232 67369782 67369232 ID=Msa0566310-mRNA-1:exon:22080;Parent=Msa0566310-mRNA-1
chr4_1 five_prime_UTR 67364314 67364399 67364314 ID=Msa0566310-mRNA-1:five_prime_utr;Parent=Msa0566310-mRNA-1
chr4_1 five_prime_UTR 67365073 67365216 67365073 ID=Msa0566310-mRNA-1:five_prime_utr;Parent=Msa0566310-mRNA-1
chr4_1 CDS 67365217 67365233 67365217 ID=Msa0566310-mRNA-1:cds;Parent=Msa0566310-mRNA-1
chr4_1 CDS 67365365 67366408 67365365 ID=Msa0566310-mRNA-1:cds;Parent=Msa0566310-mRNA-1
chr4_1 CDS 67366573 67366740 67366573 ID=Msa0566310-mRNA-1:cds;Parent=Msa0566310-mRNA-1
chr4_1 CDS 67366876 67367041 67366876 ID=Msa0566310-mRNA-1:cds;Parent=Msa0566310-mRNA-1
chr4_1 CDS 67367174 67367284 67367174 ID=Msa0566310-mRNA-1:cds;Parent=Msa0566310-mRNA-1
chr4_1 CDS 67367365 67367552 67367365 ID=Msa0566310-mRNA-1:cds;Parent=Msa0566310-mRNA-1
chr4_1 CDS 67368644 67368798 67368644 ID=Msa0566310-mRNA-1:cds;Parent=Msa0566310-mRNA-1
chr4_1 CDS 67368931 67369099 67368931 ID=Msa0566310-mRNA-1:cds;Parent=Msa0566310-mRNA-1
chr4_1 CDS 67369232 67369514 67369232 ID=Msa0566310-mRNA-1:cds;Parent=Msa0566310-mRNA-1
chr4_1 three_prime_UTR 67369515 67369782 67369515 ID=Msa0566310-mRNA-1:three_prime_utr;Parent=Msa0566310-mRNA-1
Gene Sequence

>Msa0566310

ATGGAGGACAATGGAAGGTTTGAAGAGAAGTCCTTTACAAATGGTGATGTCTACATTGGTAAATTCAAGGGTATACTTCCCCACGGCAATGGGAAGTACACATGGTCAGATGGATCGGTATATGAAGGGGATTGGATAGATGGAAAAATGACAGGGAAAGGGATACTTATATGGCCATCAGGAGCAAAGTACGAGGGTGAATTCTCCGGGAATTATCTTCACGGTCACGGCACATTCGCAAAATCGAACGGCTGTGTTTACACAGGTGGATGGAGGATGAATGCTCATCACGGGATTGGACGAAAAGTGTATTCCAATTCAGATGTTTACGAAGGTTTATGGAAAGAAGGAATTCGCGAAGGCAGCGGAAAATTTACTTGGAATGATGGAAGTATCTATATTGGAAATTGGAAAAAAGGGAAAATAGATGGAAGGGGGATTATGAAGTGGTTTAACGGCGATGTTTTTGATGGTTGTTGGTTAAATGGACTTAGACAAGGATCTGGAGTTTATAGATTTTCAGATGGAGGACTTTATATTGGAACATGGAGTAAAGGCCTAAAGGACGGAAAAGGAACATTCTATCCTTCTGGTAGCAAACAACCATCTCTAAAGAAATGGTGTACCAATCTTCATAGCGATGAGAATTGTAAGGTTCCAAATTCAAGATTTAACCGTAGTCTCTCTGAAAAAGCTCGAGCCAGTGGTAGATCGAAAAGTTCACGTCATTTATCTCAAAGTACTTCATTGTTGGATGAGAATTGTGTGATTCAAAACCCTGCTGACGATTGCATATGTCGTGATTCCTCATCCGCGTTATCGCAGACCTCTAATGAAGGTCAATCTGAGGTATCTGGTATGGGTAATATGGTTTTCGAAAGGGAATATATGCAAGGAGTTCTAATTGTGGAGAGACTTCGTGAGTATTCAGAAATATCGCATAATAAGAACAAAAAGCAAAGTAAATTTAGTATGAAGCAAGTAAAGAAGAGTTCAATTATAGGCACTTTCCAACACCGCCGAAGCTATTATCTGAAGCTTAATTTGCAGCTTGGCATCAGGTACACTGTAGGAAAAATTACACCGGTTCCTGCACGCGAAGTTCGGTCGTCTGATTTTGGAGAAAGAGCTAGGATAAGGATGTACTTTCCTAAGGAGGGTTCACAATTGACTCCTCCACACTGTTCTGTAGACTTCTACTGGAAAGATTATTGCCCTATGGTCTTCAGGAATTTGAGAGAAATGTTCAAATTGGACGCGGCCGAGTACATGATGTCCATTTGTGGTGATTGTGCTCTAAAGGACATATCTTCAGCTGGAAAAAGTGGCAGCATATTCTTTATTTCTCAAGATGACAAATTTGTGATCAAGACATTGAAAAAATATGAGCTAAAGGTTCTGCTCAATATGCTTCCTAAATACTACCATCATGTAGGAAGTTATGAAAATACTCTTATTACAAAATTCTTCGGGATCCATCGAATAACACTGAGAGGTGGGAAAAAGGTGCGGTTTGTTGTCATGGGAAATATGTTTTGCACAGAACTTCATATCCATCGTCGTTACGATCTGAAGGGATCTTCTCAAGGAAGATATACAAGCCAAGATAAAATTAATAGCAATACAACATTGAAAGATCTTGATCTAAAATACGAATTTCATATGGATAAAAAGTTGCGAGAATCGTTATTCAAGCAAATTTCTCTAGACTGCAAGTTCTTGGAATCTCAGCACATAATTGATTACAGTCTTCTGTTGGGATTGCATTTTAGAGCTCCAGAGAATCTAAAGGCGTTCGTCGAACCTCCTGGAGCAATACAGCGTCAGTATAGTTTACCTTCTGCAGATGATTTACTCAAACAAGGGGAGCAGTTGATCATTCCGAAAGGCTTGTTGTTAGTTGCACATGAACCGAGCTTCGTCAACGCGACGCCTGGACCTCACATTAGAGGGAATACATTGAGAGCATACTCCATCGGTAACAAGGAAGTTGATCTTTTACTGCCCGGTACTGCAAGATTGCCGGTGCAATTAGGAGTAAACATGCCGGCTCAAGCTACTAGTTTGCTTCAAGAAGACAAGGTGGAAGAATCAGAAGTAGAGCTTTTCGAGGTTTATGATGTGGTACTCTACATGGGAATAATAGATATACTTCAGGAATACACTGTCAAAAAGAAACTTGAGCATGCCTACAAATCACTGCAGTTTGATCCTATGACTATATCAGTAACAGAACCTAAAATTTATGCTGAACGTTTCATCAATTTCATGGATAAAAAGGTATTCCCGGAAATACCGTGA
Protein sequence

>Msa0566310

MEDNGRFEEKSFTNGDVYIGKFKGILPHGNGKYTWSDGSVYEGDWIDGKMTGKGILIWPSGAKYEGEFSGNYLHGHGTFAKSNGCVYTGGWRMNAHHGIGRKVYSNSDVYEGLWKEGIREGSGKFTWNDGSIYIGNWKKGKIDGRGIMKWFNGDVFDGCWLNGLRQGSGVYRFSDGGLYIGTWSKGLKDGKGTFYPSGSKQPSLKKWCTNLHSDENCKVPNSRFNRSLSEKARASGRSKSSRHLSQSTSLLDENCVIQNPADDCICRDSSSALSQTSNEGQSEVSGMGNMVFEREYMQGVLIVERLREYSEISHNKNKKQSKFSMKQVKKSSIIGTFQHRRSYYLKLNLQLGIRYTVGKITPVPAREVRSSDFGERARIRMYFPKEGSQLTPPHCSVDFYWKDYCPMVFRNLREMFKLDAAEYMMSICGDCALKDISSAGKSGSIFFISQDDKFVIKTLKKYELKVLLNMLPKYYHHVGSYENTLITKFFGIHRITLRGGKKVRFVVMGNMFCTELHIHRRYDLKGSSQGRYTSQDKINSNTTLKDLDLKYEFHMDKKLRESLFKQISLDCKFLESQHIIDYSLLLGLHFRAPENLKAFVEPPGAIQRQYSLPSADDLLKQGEQLIIPKGLLLVAHEPSFVNATPGPHIRGNTLRAYSIGNKEVDLLLPGTARLPVQLGVNMPAQATSLLQEDKVEESEVELFEVYDVVLYMGIIDILQEYTVKKKLEHAYKSLQFDPMTISVTEPKIYAERFINFMDKKVFPEIP*