Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0333450 | AFI56799.1 | 91.885 | 382 | 27 | 2 | 1 | 379 | 1 | 381 | 0.0 | 576 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0333450 | sp|O04017|NAC98_ARATH | 49.144 | 409 | 144 | 14 | 1 | 379 | 1 | 375 | 2.62e-108 | 325 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0333450 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006980 | Msa0333450 | 0.801694 | 7.978745e-49 | -8.615850e-47 |
Msa0104500 | Msa0333450 | 0.806061 | 9.878494e-50 | -8.615850e-47 |
Msa0149140 | Msa0333450 | 0.808461 | 3.062780e-50 | -8.615850e-47 |
Msa0197100 | Msa0333450 | 0.802804 | 4.714729e-49 | -8.615850e-47 |
Msa0215640 | Msa0333450 | 0.873945 | 9.922356e-68 | -8.615850e-47 |
Msa0306120 | Msa0333450 | 0.820919 | 5.318966e-53 | -8.615850e-47 |
Msa0333450 | Msa0333700 | 0.915729 | 4.162966e-85 | -8.615850e-47 |
Msa0333450 | Msa0338970 | 0.804954 | 1.685547e-49 | -8.615850e-47 |
Msa0333450 | Msa0343660 | 0.896555 | 3.296671e-76 | -8.615850e-47 |
Msa0333450 | Msa0359250 | 0.828166 | 1.045624e-54 | -8.615850e-47 |
Msa0333450 | Msa0406000 | 0.831169 | 1.943750e-55 | -8.615850e-47 |
Msa0333450 | Msa0451400 | 0.841669 | 4.129262e-58 | -8.615850e-47 |
Msa0333450 | Msa0492190 | 0.825152 | 5.476299e-54 | -8.615850e-47 |
Msa0333450 | Msa0591790 | 0.815064 | 1.119222e-51 | -8.615850e-47 |
Msa0333450 | Msa0669840 | 0.833350 | 5.610217e-56 | -8.615850e-47 |
Msa0333450 | Msa0739580 | 0.808554 | 2.925098e-50 | -8.615850e-47 |
Msa0333450 | Msa0782360 | 0.810876 | 9.267497e-51 | -8.615850e-47 |
Msa0333450 | Msa0860160 | 0.828972 | 6.677665e-55 | -8.615850e-47 |
Msa0333450 | Msa0860280 | 0.830787 | 2.411655e-55 | -8.615850e-47 |
Msa0333450 | Msa0898730 | 0.801439 | 9.000435e-49 | -8.615850e-47 |
Msa0333450 | Msa1084520 | 0.822921 | 1.828461e-53 | -8.615850e-47 |
Msa0333450 | Msa1125810 | 0.802003 | 6.895482e-49 | -8.615850e-47 |
Msa0333450 | Msa1171310 | 0.813047 | 3.118515e-51 | -8.615850e-47 |
Msa0333450 | Msa1201110 | 0.806240 | 9.053724e-50 | -8.615850e-47 |
Msa0333450 | Msa1201160 | 0.808242 | 3.410526e-50 | -8.615850e-47 |
Msa0333450 | Msa1233560 | 0.800420 | 1.453538e-48 | -8.615850e-47 |
Msa0333450 | Msa1313970 | 0.806723 | 7.161418e-50 | -8.615850e-47 |
Msa0333450 | Msa1379970 | 0.805977 | 1.028704e-49 | -8.615850e-47 |
Msa0333450 | Msa1406780 | 0.824521 | 7.715880e-54 | -8.615850e-47 |
Msa0333450 | Msa1431850 | 0.826048 | 3.359475e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0333450 | MtrunA17_Chr2g0316971 | 91.623 | 382 | 28 | 2 | 1 | 379 | 1 | 381 | 0.0 | 553 |
Msa0333450 | MtrunA17_Chr4g0060931 | 50.980 | 306 | 98 | 9 | 23 | 323 | 17 | 275 | 1.57e-83 | 258 |
Msa0333450 | MtrunA17_Chr3g0091921 | 52.809 | 267 | 94 | 5 | 23 | 284 | 16 | 255 | 2.39e-82 | 253 |
Msa0333450 | MtrunA17_Chr6g0453451 | 47.099 | 293 | 112 | 6 | 22 | 313 | 19 | 269 | 1.01e-79 | 247 |
Msa0333450 | MtrunA17_Chr7g0253011 | 56.459 | 209 | 69 | 3 | 23 | 226 | 17 | 208 | 1.21e-74 | 236 |
Msa0333450 | MtrunA17_Chr6g0484441 | 72.258 | 155 | 38 | 3 | 20 | 173 | 2 | 152 | 1.65e-74 | 234 |
Msa0333450 | MtrunA17_Chr1g0147421 | 64.072 | 167 | 52 | 3 | 11 | 173 | 15 | 177 | 4.75e-72 | 229 |
Msa0333450 | MtrunA17_Chr6g0461661 | 44.178 | 292 | 132 | 8 | 23 | 311 | 18 | 281 | 8.62e-72 | 229 |
Msa0333450 | MtrunA17_Chr3g0139331 | 53.589 | 209 | 89 | 3 | 23 | 227 | 11 | 215 | 1.04e-71 | 228 |
Msa0333450 | MtrunA17_Chr7g0217721 | 50.000 | 244 | 90 | 5 | 8 | 236 | 4 | 230 | 1.76e-68 | 219 |
Msa0333450 | MtrunA17_Chr2g0312321 | 46.183 | 262 | 95 | 10 | 20 | 279 | 8 | 225 | 1.59e-61 | 200 |
Msa0333450 | MtrunA17_Chr7g0217711 | 65.493 | 142 | 48 | 1 | 9 | 149 | 5 | 146 | 3.91e-60 | 192 |
Msa0333450 | MtrunA17_Chr3g0144271 | 68.310 | 142 | 38 | 3 | 23 | 160 | 23 | 161 | 1.21e-59 | 199 |
Msa0333450 | MtrunA17_Chr1g0183741 | 52.469 | 162 | 68 | 2 | 21 | 179 | 8 | 163 | 7.84e-54 | 179 |
Msa0333450 | MtrunA17_Chr4g0017921 | 57.143 | 161 | 58 | 4 | 19 | 174 | 4 | 158 | 1.50e-53 | 181 |
Msa0333450 | MtrunA17_Chr7g0252971 | 49.162 | 179 | 79 | 2 | 22 | 188 | 7 | 185 | 1.14e-52 | 178 |
Msa0333450 | MtrunA17_Chr4g0056541 | 53.333 | 165 | 63 | 5 | 18 | 175 | 2 | 159 | 1.90e-52 | 178 |
Msa0333450 | MtrunA17_Chr7g0261411 | 53.896 | 154 | 62 | 2 | 21 | 171 | 8 | 155 | 2.03e-52 | 176 |
Msa0333450 | MtrunA17_Chr2g0309891 | 56.494 | 154 | 63 | 3 | 23 | 173 | 6 | 158 | 2.92e-52 | 177 |
Msa0333450 | MtrunA17_Chr6g0481091 | 47.619 | 189 | 89 | 5 | 23 | 207 | 6 | 188 | 7.21e-52 | 172 |
Msa0333450 | MtrunA17_Chr5g0405211 | 48.571 | 175 | 74 | 5 | 17 | 183 | 2 | 168 | 1.66e-51 | 175 |
Msa0333450 | MtrunA17_Chr4g0018391 | 51.852 | 162 | 70 | 3 | 18 | 175 | 2 | 159 | 1.71e-51 | 175 |
Msa0333450 | MtrunA17_Chr5g0417791 | 52.564 | 156 | 71 | 2 | 22 | 174 | 2 | 157 | 3.14e-51 | 172 |
Msa0333450 | MtrunA17_Chr2g0309331 | 53.165 | 158 | 65 | 3 | 23 | 175 | 10 | 163 | 4.45e-51 | 174 |
Msa0333450 | MtrunA17_Chr4g0047841 | 49.171 | 181 | 66 | 5 | 22 | 177 | 14 | 193 | 4.50e-51 | 174 |
Msa0333450 | MtrunA17_Chr8g0346001 | 49.405 | 168 | 74 | 4 | 18 | 174 | 10 | 177 | 7.29e-51 | 176 |
Msa0333450 | MtrunA17_Chr8g0359921 | 52.532 | 158 | 74 | 1 | 19 | 175 | 10 | 167 | 1.02e-50 | 172 |
Msa0333450 | MtrunA17_Chr3g0124761 | 52.830 | 159 | 72 | 2 | 19 | 175 | 3 | 160 | 1.05e-50 | 171 |
Msa0333450 | MtrunA17_Chr7g0263931 | 53.049 | 164 | 72 | 2 | 14 | 172 | 2 | 165 | 1.66e-50 | 172 |
Msa0333450 | MtrunA17_Chr5g0398971 | 51.250 | 160 | 70 | 3 | 18 | 172 | 2 | 158 | 2.29e-50 | 172 |
Msa0333450 | MtrunA17_Chr5g0433781 | 44.954 | 218 | 108 | 4 | 23 | 237 | 6 | 214 | 3.26e-50 | 178 |
Msa0333450 | MtrunA17_Chr4g0042561 | 50.943 | 159 | 75 | 2 | 21 | 176 | 7 | 165 | 4.24e-50 | 169 |
Msa0333450 | MtrunA17_Chr2g0318101 | 52.096 | 167 | 66 | 4 | 22 | 175 | 14 | 179 | 4.73e-50 | 171 |
Msa0333450 | MtrunA17_Chr2g0318081 | 52.500 | 160 | 63 | 4 | 23 | 176 | 16 | 168 | 6.90e-49 | 168 |
Msa0333450 | MtrunA17_Chr3g0109821 | 55.195 | 154 | 65 | 3 | 23 | 173 | 6 | 158 | 1.20e-48 | 174 |
Msa0333450 | MtrunA17_Chr2g0326361 | 52.830 | 159 | 70 | 2 | 19 | 172 | 10 | 168 | 2.64e-48 | 166 |
Msa0333450 | MtrunA17_Chr5g0400461 | 33.718 | 347 | 165 | 11 | 21 | 339 | 4 | 313 | 3.85e-48 | 166 |
Msa0333450 | MtrunA17_Chr8g0384721 | 52.597 | 154 | 67 | 2 | 23 | 172 | 7 | 158 | 5.11e-48 | 164 |
Msa0333450 | MtrunA17_Chr8g0372121 | 48.765 | 162 | 75 | 3 | 23 | 180 | 6 | 163 | 8.73e-48 | 164 |
Msa0333450 | MtrunA17_Chr3g0130731 | 50.968 | 155 | 75 | 1 | 20 | 173 | 4 | 158 | 2.29e-47 | 162 |
Msa0333450 | MtrunA17_Chr1g0200561 | 48.408 | 157 | 67 | 4 | 23 | 172 | 19 | 168 | 2.36e-46 | 162 |
Msa0333450 | MtrunA17_Chr4g0054791 | 41.152 | 243 | 108 | 9 | 21 | 236 | 4 | 238 | 3.23e-46 | 160 |
Msa0333450 | MtrunA17_Chr7g0214071 | 47.368 | 171 | 78 | 4 | 18 | 183 | 10 | 173 | 3.00e-45 | 156 |
Msa0333450 | MtrunA17_Chr3g0130101 | 50.955 | 157 | 68 | 5 | 25 | 176 | 9 | 161 | 1.22e-44 | 157 |
Msa0333450 | MtrunA17_Chr6g0453131 | 48.171 | 164 | 72 | 3 | 23 | 175 | 15 | 176 | 1.62e-44 | 158 |
Msa0333450 | MtrunA17_Chr8g0361731 | 35.766 | 274 | 119 | 6 | 25 | 275 | 16 | 255 | 3.46e-44 | 157 |
Msa0333450 | MtrunA17_Chr3g0113001 | 51.497 | 167 | 62 | 4 | 72 | 236 | 14 | 163 | 7.45e-44 | 154 |
Msa0333450 | MtrunA17_Chr5g0417001 | 45.455 | 165 | 81 | 3 | 20 | 175 | 11 | 175 | 2.68e-42 | 152 |
Msa0333450 | MtrunA17_Chr4g0076731 | 50.000 | 152 | 68 | 3 | 25 | 173 | 56 | 202 | 8.71e-42 | 152 |
Msa0333450 | MtrunA17_Chr1g0201021 | 47.742 | 155 | 76 | 3 | 25 | 176 | 21 | 173 | 2.86e-41 | 152 |
Msa0333450 | MtrunA17_Chr8g0364791 | 47.170 | 159 | 75 | 5 | 23 | 176 | 6 | 160 | 5.80e-41 | 149 |
Msa0333450 | MtrunA17_Chr3g0092671 | 49.057 | 159 | 68 | 6 | 25 | 176 | 7 | 159 | 6.99e-41 | 151 |
Msa0333450 | MtrunA17_Chr1g0197351 | 50.000 | 162 | 72 | 4 | 23 | 176 | 42 | 202 | 1.83e-40 | 149 |
Msa0333450 | MtrunA17_Chr5g0442771 | 38.249 | 217 | 118 | 5 | 11 | 215 | 6 | 218 | 4.98e-40 | 144 |
Msa0333450 | MtrunA17_Chr8g0384201 | 45.912 | 159 | 77 | 5 | 23 | 176 | 6 | 160 | 5.33e-40 | 148 |
Msa0333450 | MtrunA17_Chr3g0128151 | 42.487 | 193 | 89 | 5 | 23 | 200 | 22 | 207 | 1.94e-39 | 148 |
Msa0333450 | MtrunA17_Chr5g0428991 | 44.271 | 192 | 83 | 6 | 23 | 198 | 25 | 208 | 2.20e-39 | 148 |
Msa0333450 | MtrunA17_Chr1g0197361 | 46.541 | 159 | 72 | 6 | 25 | 176 | 10 | 162 | 3.01e-39 | 147 |
Msa0333450 | MtrunA17_Chr3g0128111 | 43.103 | 174 | 77 | 5 | 26 | 184 | 45 | 211 | 5.86e-37 | 134 |
Msa0333450 | MtrunA17_Chr4g0038751 | 48.819 | 127 | 61 | 1 | 25 | 147 | 17 | 143 | 3.77e-35 | 130 |
Msa0333450 | MtrunA17_Chr2g0311651 | 47.586 | 145 | 67 | 4 | 11 | 147 | 9 | 152 | 6.24e-35 | 130 |
Msa0333450 | MtrunA17_Chr2g0311661 | 48.905 | 137 | 61 | 4 | 19 | 147 | 16 | 151 | 3.90e-34 | 127 |
Msa0333450 | MtrunA17_Chr8g0385991 | 40.606 | 165 | 90 | 3 | 18 | 176 | 9 | 171 | 8.34e-34 | 125 |
Msa0333450 | MtrunA17_Chr3g0113031 | 48.077 | 156 | 61 | 5 | 84 | 236 | 1 | 139 | 1.09e-33 | 126 |
Msa0333450 | MtrunA17_Chr3g0131911 | 40.698 | 172 | 89 | 5 | 18 | 178 | 9 | 178 | 1.38e-33 | 125 |
Msa0333450 | MtrunA17_Chr8g0345671 | 49.645 | 141 | 62 | 5 | 11 | 145 | 1 | 138 | 3.03e-31 | 122 |
Msa0333450 | MtrunA17_Chr4g0026141 | 44.275 | 131 | 66 | 3 | 23 | 146 | 5 | 135 | 7.66e-29 | 112 |
Msa0333450 | MtrunA17_Chr8g0345691 | 46.154 | 130 | 63 | 4 | 22 | 145 | 11 | 139 | 3.41e-28 | 114 |
Msa0333450 | MtrunA17_Chr2g0321631 | 42.748 | 131 | 67 | 3 | 24 | 146 | 5 | 135 | 1.15e-27 | 109 |
Msa0333450 | MtrunA17_Chr2g0321741 | 44.526 | 137 | 61 | 5 | 42 | 175 | 11 | 135 | 3.58e-27 | 110 |
Msa0333450 | MtrunA17_Chr8g0345711 | 43.411 | 129 | 66 | 4 | 23 | 145 | 12 | 139 | 7.09e-25 | 99.8 |
Msa0333450 | MtrunA17_Chr8g0345731 | 45.455 | 132 | 62 | 6 | 23 | 145 | 24 | 154 | 1.50e-24 | 99.0 |
Msa0333450 | MtrunA17_Chr7g0266701 | 36.196 | 163 | 93 | 6 | 23 | 174 | 4 | 166 | 1.00e-23 | 99.0 |
Msa0333450 | MtrunA17_Chr4g0050701 | 33.533 | 167 | 93 | 4 | 23 | 179 | 11 | 169 | 2.66e-23 | 95.9 |
Msa0333450 | MtrunA17_Chr8g0345701 | 41.667 | 144 | 59 | 7 | 23 | 145 | 7 | 146 | 2.87e-21 | 90.1 |
Msa0333450 | MtrunA17_Chr3g0113011 | 60.000 | 60 | 24 | 0 | 10 | 69 | 6 | 65 | 3.46e-19 | 81.3 |
Msa0333450 | MtrunA17_Chr7g0251661 | 33.333 | 132 | 81 | 5 | 18 | 145 | 5 | 133 | 8.27e-18 | 80.1 |
Msa0333450 | MtrunA17_Chr8g0384351 | 36.709 | 158 | 71 | 7 | 19 | 172 | 6 | 138 | 1.72e-17 | 79.7 |
Msa0333450 | MtrunA17_Chr3g0113041 | 54.839 | 62 | 28 | 0 | 8 | 69 | 4 | 65 | 3.00e-17 | 75.9 |
Msa0333450 | MtrunA17_Chr7g0243371 | 46.667 | 75 | 37 | 1 | 76 | 147 | 17 | 91 | 1.01e-16 | 75.9 |
Msa0333450 | MtrunA17_Chr8g0345741 | 37.815 | 119 | 65 | 5 | 34 | 145 | 2 | 118 | 5.95e-16 | 74.7 |
Msa0333450 | MtrunA17_Chr7g0251671 | 32.143 | 140 | 84 | 5 | 18 | 151 | 5 | 139 | 1.06e-15 | 74.3 |
Msa0333450 | MtrunA17_Chr3g0130321 | 32.515 | 163 | 87 | 8 | 23 | 171 | 7 | 160 | 2.41e-14 | 71.2 |
Msa0333450 | MtrunA17_Chr7g0251651 | 33.071 | 127 | 78 | 5 | 23 | 145 | 18 | 141 | 6.96e-14 | 69.7 |
Msa0333450 | MtrunA17_Chr4g0046431 | 31.016 | 187 | 99 | 8 | 23 | 187 | 68 | 246 | 3.55e-12 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0333450 | AT5G53950.1 | 49.144 | 409 | 144 | 14 | 1 | 379 | 1 | 375 | 2.66e-109 | 325 |
Msa0333450 | AT5G61430.1 | 64.734 | 207 | 52 | 4 | 23 | 228 | 16 | 202 | 4.05e-82 | 254 |
Msa0333450 | AT5G07680.1 | 46.584 | 322 | 119 | 7 | 1 | 321 | 1 | 270 | 9.01e-82 | 253 |
Msa0333450 | AT5G07680.2 | 48.667 | 300 | 107 | 6 | 23 | 321 | 3 | 256 | 1.55e-81 | 252 |
Msa0333450 | AT3G15170.1 | 74.359 | 156 | 37 | 1 | 23 | 175 | 20 | 175 | 2.35e-81 | 251 |
Msa0333450 | AT5G18270.2 | 67.485 | 163 | 51 | 1 | 23 | 183 | 21 | 183 | 8.42e-77 | 241 |
Msa0333450 | AT5G18270.1 | 53.947 | 228 | 92 | 3 | 23 | 248 | 21 | 237 | 1.30e-76 | 240 |
Msa0333450 | AT3G29035.1 | 53.282 | 259 | 77 | 6 | 23 | 271 | 24 | 248 | 4.91e-76 | 238 |
Msa0333450 | AT5G39610.1 | 72.903 | 155 | 41 | 1 | 23 | 176 | 20 | 174 | 6.53e-75 | 234 |
Msa0333450 | AT3G18400.1 | 69.677 | 155 | 43 | 2 | 20 | 173 | 2 | 153 | 4.42e-73 | 230 |
Msa0333450 | AT3G04060.1 | 62.286 | 175 | 61 | 2 | 13 | 185 | 10 | 181 | 3.22e-72 | 229 |
Msa0333450 | AT2G24430.2 | 62.147 | 177 | 52 | 4 | 1 | 173 | 1 | 166 | 8.82e-71 | 224 |
Msa0333450 | AT2G24430.1 | 62.147 | 177 | 52 | 4 | 1 | 173 | 1 | 166 | 8.82e-71 | 224 |
Msa0333450 | AT1G76420.1 | 49.356 | 233 | 106 | 3 | 23 | 252 | 22 | 245 | 2.18e-68 | 219 |
Msa0333450 | AT3G12977.1 | 52.514 | 179 | 79 | 4 | 12 | 187 | 7 | 182 | 2.25e-61 | 199 |
Msa0333450 | AT1G56010.2 | 43.411 | 258 | 109 | 9 | 11 | 264 | 7 | 231 | 5.84e-58 | 192 |
Msa0333450 | AT4G10350.1 | 49.495 | 198 | 80 | 6 | 19 | 207 | 5 | 191 | 1.43e-54 | 183 |
Msa0333450 | AT3G04070.2 | 50.282 | 177 | 75 | 3 | 23 | 187 | 10 | 185 | 1.32e-52 | 178 |
Msa0333450 | AT3G04070.1 | 48.705 | 193 | 70 | 4 | 23 | 187 | 10 | 201 | 1.96e-52 | 178 |
Msa0333450 | AT1G33280.1 | 53.416 | 161 | 64 | 4 | 19 | 174 | 4 | 158 | 3.32e-52 | 176 |
Msa0333450 | AT1G12260.2 | 53.459 | 159 | 66 | 3 | 18 | 172 | 2 | 156 | 3.79e-52 | 177 |
Msa0333450 | AT1G12260.1 | 53.459 | 159 | 66 | 3 | 18 | 172 | 2 | 156 | 4.57e-52 | 178 |
Msa0333450 | AT2G46770.1 | 45.050 | 202 | 94 | 5 | 18 | 202 | 11 | 212 | 6.47e-52 | 177 |
Msa0333450 | AT2G18060.3 | 49.704 | 169 | 77 | 3 | 23 | 187 | 9 | 173 | 2.38e-51 | 176 |
Msa0333450 | AT2G18060.1 | 49.704 | 169 | 77 | 3 | 23 | 187 | 9 | 173 | 2.38e-51 | 176 |
Msa0333450 | AT5G08790.1 | 53.374 | 163 | 69 | 2 | 18 | 175 | 2 | 162 | 7.85e-51 | 172 |
Msa0333450 | AT5G61430.2 | 59.494 | 158 | 43 | 4 | 72 | 228 | 2 | 139 | 8.09e-51 | 171 |
Msa0333450 | AT1G01720.1 | 45.918 | 196 | 100 | 2 | 22 | 215 | 6 | 197 | 1.11e-50 | 172 |
Msa0333450 | AT1G62700.1 | 53.704 | 162 | 61 | 4 | 18 | 172 | 2 | 156 | 1.23e-50 | 174 |
Msa0333450 | AT1G62700.2 | 53.704 | 162 | 61 | 4 | 18 | 172 | 2 | 156 | 1.23e-50 | 174 |
Msa0333450 | AT1G79580.3 | 54.601 | 163 | 60 | 4 | 23 | 178 | 17 | 172 | 2.11e-50 | 173 |
Msa0333450 | AT1G79580.5 | 54.601 | 163 | 60 | 4 | 23 | 178 | 17 | 172 | 2.11e-50 | 173 |
Msa0333450 | AT1G79580.4 | 54.601 | 163 | 60 | 4 | 23 | 178 | 17 | 172 | 2.11e-50 | 173 |
Msa0333450 | AT1G79580.2 | 54.601 | 163 | 60 | 4 | 23 | 178 | 17 | 172 | 2.11e-50 | 173 |
Msa0333450 | AT1G79580.1 | 54.601 | 163 | 60 | 4 | 23 | 178 | 17 | 172 | 2.11e-50 | 173 |
Msa0333450 | AT1G65910.1 | 49.206 | 189 | 86 | 5 | 23 | 208 | 6 | 187 | 2.78e-50 | 178 |
Msa0333450 | AT3G17730.1 | 52.941 | 153 | 67 | 3 | 23 | 172 | 6 | 156 | 2.84e-50 | 169 |
Msa0333450 | AT5G62380.2 | 44.608 | 204 | 96 | 5 | 21 | 214 | 5 | 201 | 3.77e-50 | 172 |
Msa0333450 | AT5G62380.1 | 44.608 | 204 | 96 | 5 | 21 | 214 | 5 | 201 | 3.77e-50 | 172 |
Msa0333450 | AT4G27410.2 | 50.602 | 166 | 78 | 3 | 23 | 187 | 14 | 176 | 6.93e-50 | 170 |
Msa0333450 | AT1G54330.1 | 55.844 | 154 | 58 | 4 | 23 | 172 | 6 | 153 | 9.85e-50 | 169 |
Msa0333450 | AT5G66300.1 | 50.909 | 165 | 72 | 4 | 16 | 175 | 5 | 165 | 1.04e-49 | 169 |
Msa0333450 | AT5G63790.1 | 52.469 | 162 | 70 | 2 | 19 | 175 | 46 | 205 | 3.45e-49 | 168 |
Msa0333450 | AT5G63790.2 | 52.469 | 162 | 70 | 2 | 19 | 175 | 56 | 215 | 3.70e-49 | 169 |
Msa0333450 | AT1G77450.1 | 48.023 | 177 | 81 | 3 | 19 | 185 | 6 | 181 | 4.73e-49 | 166 |
Msa0333450 | AT3G03200.1 | 55.556 | 153 | 64 | 3 | 23 | 172 | 6 | 157 | 5.23e-49 | 172 |
Msa0333450 | AT4G28530.1 | 41.778 | 225 | 94 | 5 | 23 | 228 | 10 | 216 | 6.07e-49 | 169 |
Msa0333450 | AT1G71930.2 | 49.351 | 154 | 70 | 3 | 23 | 172 | 9 | 158 | 7.99e-49 | 168 |
Msa0333450 | AT1G71930.1 | 49.351 | 154 | 70 | 3 | 23 | 172 | 9 | 158 | 7.99e-49 | 168 |
Msa0333450 | AT4G36160.1 | 49.412 | 170 | 77 | 4 | 23 | 187 | 10 | 175 | 1.10e-48 | 169 |
Msa0333450 | AT4G36160.3 | 49.412 | 170 | 77 | 4 | 23 | 187 | 10 | 175 | 1.10e-48 | 169 |
Msa0333450 | AT4G36160.2 | 49.412 | 170 | 77 | 4 | 23 | 187 | 14 | 179 | 1.30e-48 | 169 |
Msa0333450 | AT3G61910.1 | 44.886 | 176 | 82 | 3 | 14 | 174 | 2 | 177 | 1.40e-48 | 167 |
Msa0333450 | AT1G32770.1 | 49.708 | 171 | 70 | 5 | 18 | 174 | 11 | 179 | 1.60e-48 | 168 |
Msa0333450 | AT3G15500.1 | 49.708 | 171 | 75 | 4 | 23 | 188 | 14 | 178 | 3.37e-48 | 166 |
Msa0333450 | AT1G52890.1 | 53.165 | 158 | 63 | 4 | 23 | 175 | 14 | 165 | 8.02e-48 | 165 |
Msa0333450 | AT1G61110.1 | 48.023 | 177 | 80 | 4 | 11 | 175 | 4 | 180 | 8.68e-48 | 165 |
Msa0333450 | AT1G69490.1 | 43.878 | 196 | 95 | 5 | 19 | 204 | 5 | 195 | 2.78e-47 | 162 |
Msa0333450 | AT5G17260.1 | 54.248 | 153 | 66 | 3 | 23 | 172 | 6 | 157 | 3.70e-47 | 167 |
Msa0333450 | AT3G10500.1 | 49.689 | 161 | 68 | 4 | 23 | 176 | 9 | 163 | 5.70e-47 | 168 |
Msa0333450 | AT5G04410.1 | 51.266 | 158 | 70 | 4 | 23 | 176 | 9 | 163 | 1.29e-46 | 167 |
Msa0333450 | AT5G46590.1 | 51.948 | 154 | 69 | 3 | 23 | 172 | 6 | 158 | 2.74e-46 | 160 |
Msa0333450 | AT5G46590.2 | 56.589 | 129 | 52 | 2 | 23 | 147 | 6 | 134 | 3.30e-46 | 160 |
Msa0333450 | AT1G52880.1 | 50.000 | 160 | 69 | 2 | 27 | 175 | 21 | 180 | 9.80e-46 | 159 |
Msa0333450 | AT4G27410.3 | 45.902 | 183 | 78 | 4 | 23 | 187 | 14 | 193 | 1.36e-45 | 159 |
Msa0333450 | AT3G15510.1 | 51.235 | 162 | 65 | 5 | 27 | 175 | 21 | 181 | 1.41e-45 | 160 |
Msa0333450 | AT5G39820.1 | 44.974 | 189 | 79 | 4 | 11 | 174 | 5 | 193 | 3.79e-45 | 159 |
Msa0333450 | AT3G10480.1 | 53.750 | 160 | 64 | 5 | 23 | 176 | 27 | 182 | 7.30e-45 | 160 |
Msa0333450 | AT3G10490.1 | 51.899 | 158 | 70 | 4 | 23 | 176 | 27 | 182 | 1.03e-44 | 154 |
Msa0333450 | AT3G10480.2 | 54.088 | 159 | 64 | 5 | 23 | 176 | 27 | 181 | 1.90e-44 | 159 |
Msa0333450 | AT1G26870.1 | 46.286 | 175 | 82 | 3 | 12 | 175 | 5 | 178 | 4.01e-43 | 155 |
Msa0333450 | AT4G17980.2 | 49.677 | 155 | 73 | 2 | 23 | 172 | 6 | 160 | 4.62e-43 | 152 |
Msa0333450 | AT4G17980.1 | 51.282 | 156 | 69 | 3 | 23 | 172 | 6 | 160 | 4.76e-43 | 151 |
Msa0333450 | AT1G33060.1 | 55.725 | 131 | 55 | 2 | 23 | 150 | 24 | 154 | 6.06e-43 | 159 |
Msa0333450 | AT1G33060.2 | 55.725 | 131 | 55 | 2 | 23 | 150 | 24 | 154 | 6.54e-43 | 158 |
Msa0333450 | AT3G10490.2 | 51.899 | 158 | 70 | 4 | 23 | 176 | 27 | 182 | 6.54e-43 | 155 |
Msa0333450 | AT5G13180.1 | 46.626 | 163 | 78 | 3 | 18 | 177 | 9 | 165 | 7.46e-43 | 150 |
Msa0333450 | AT4G35580.3 | 41.667 | 240 | 102 | 9 | 23 | 252 | 9 | 220 | 8.53e-43 | 156 |
Msa0333450 | AT4G35580.2 | 41.667 | 240 | 102 | 9 | 23 | 252 | 9 | 220 | 8.83e-43 | 156 |
Msa0333450 | AT4G35580.1 | 41.667 | 240 | 102 | 9 | 23 | 252 | 9 | 220 | 9.10e-43 | 156 |
Msa0333450 | AT2G02450.1 | 50.331 | 151 | 67 | 3 | 25 | 172 | 53 | 198 | 1.98e-42 | 152 |
Msa0333450 | AT2G02450.2 | 50.331 | 151 | 67 | 3 | 25 | 172 | 53 | 198 | 2.14e-42 | 153 |
Msa0333450 | AT2G33480.1 | 46.951 | 164 | 81 | 3 | 17 | 179 | 9 | 167 | 5.99e-42 | 148 |
Msa0333450 | AT2G33480.2 | 46.951 | 164 | 79 | 3 | 17 | 179 | 9 | 165 | 1.03e-41 | 147 |
Msa0333450 | AT5G64060.1 | 44.654 | 159 | 79 | 5 | 23 | 176 | 6 | 160 | 3.65e-41 | 148 |
Msa0333450 | AT1G32870.2 | 49.383 | 162 | 67 | 4 | 23 | 176 | 10 | 164 | 1.79e-40 | 150 |
Msa0333450 | AT5G09330.5 | 44.304 | 158 | 83 | 3 | 22 | 176 | 5 | 160 | 2.11e-40 | 149 |
Msa0333450 | AT5G09330.2 | 44.304 | 158 | 83 | 3 | 22 | 176 | 5 | 160 | 2.11e-40 | 149 |
Msa0333450 | AT5G09330.4 | 44.304 | 158 | 83 | 3 | 22 | 176 | 5 | 160 | 2.11e-40 | 149 |
Msa0333450 | AT5G09330.3 | 44.304 | 158 | 83 | 3 | 22 | 176 | 5 | 160 | 2.11e-40 | 149 |
Msa0333450 | AT5G09330.1 | 44.304 | 158 | 83 | 3 | 22 | 176 | 5 | 160 | 2.11e-40 | 149 |
Msa0333450 | AT1G32870.1 | 49.383 | 162 | 67 | 4 | 23 | 176 | 10 | 164 | 2.16e-40 | 150 |
Msa0333450 | AT2G43000.1 | 38.500 | 200 | 111 | 5 | 25 | 214 | 20 | 217 | 2.29e-40 | 144 |
Msa0333450 | AT5G24590.2 | 43.820 | 178 | 84 | 4 | 11 | 179 | 1 | 171 | 2.87e-40 | 148 |
Msa0333450 | AT1G34180.3 | 46.154 | 156 | 77 | 4 | 25 | 176 | 18 | 170 | 3.58e-40 | 148 |
Msa0333450 | AT3G10480.3 | 45.078 | 193 | 63 | 5 | 23 | 176 | 27 | 215 | 4.28e-40 | 149 |
Msa0333450 | AT1G32870.3 | 49.383 | 162 | 67 | 4 | 23 | 176 | 46 | 200 | 5.21e-40 | 149 |
Msa0333450 | AT1G34190.1 | 46.154 | 156 | 77 | 4 | 25 | 176 | 18 | 170 | 9.71e-40 | 149 |
Msa0333450 | AT1G34180.1 | 46.154 | 156 | 77 | 4 | 25 | 176 | 18 | 170 | 1.32e-39 | 148 |
Msa0333450 | AT1G32510.1 | 39.604 | 202 | 91 | 5 | 23 | 208 | 6 | 192 | 4.50e-39 | 141 |
Msa0333450 | AT1G34180.4 | 42.857 | 168 | 77 | 4 | 25 | 176 | 18 | 182 | 2.10e-38 | 143 |
Msa0333450 | AT3G49530.2 | 49.286 | 140 | 67 | 2 | 11 | 146 | 1 | 140 | 2.99e-38 | 142 |
Msa0333450 | AT3G49530.1 | 49.286 | 140 | 67 | 2 | 11 | 146 | 1 | 140 | 4.50e-38 | 142 |
Msa0333450 | AT1G34180.2 | 42.857 | 168 | 77 | 4 | 25 | 176 | 18 | 182 | 6.04e-38 | 144 |
Msa0333450 | AT2G27300.1 | 50.769 | 130 | 60 | 3 | 23 | 149 | 14 | 142 | 3.22e-37 | 137 |
Msa0333450 | AT3G12977.2 | 56.198 | 121 | 47 | 4 | 70 | 187 | 12 | 129 | 5.20e-37 | 134 |
Msa0333450 | AT2G17040.1 | 48.819 | 127 | 61 | 1 | 25 | 147 | 8 | 134 | 3.90e-36 | 133 |
Msa0333450 | AT1G56010.1 | 41.837 | 196 | 78 | 8 | 72 | 264 | 2 | 164 | 1.17e-35 | 131 |
Msa0333450 | AT5G04395.1 | 46.309 | 149 | 63 | 3 | 16 | 147 | 21 | 169 | 3.16e-34 | 125 |
Msa0333450 | AT5G22290.1 | 37.363 | 182 | 102 | 4 | 25 | 203 | 23 | 195 | 1.69e-33 | 127 |
Msa0333450 | AT3G12910.1 | 46.154 | 143 | 68 | 4 | 12 | 147 | 10 | 150 | 6.31e-33 | 125 |
Msa0333450 | AT4G28530.2 | 49.593 | 123 | 45 | 2 | 23 | 129 | 10 | 131 | 1.68e-32 | 124 |
Msa0333450 | AT3G44290.2 | 46.875 | 128 | 64 | 3 | 25 | 149 | 16 | 142 | 7.48e-32 | 120 |
Msa0333450 | AT3G44290.1 | 42.500 | 160 | 78 | 5 | 25 | 181 | 16 | 164 | 3.94e-31 | 121 |
Msa0333450 | AT4G10350.2 | 55.357 | 112 | 42 | 4 | 68 | 174 | 7 | 115 | 4.28e-31 | 120 |
Msa0333450 | AT1G02230.1 | 36.879 | 141 | 80 | 4 | 24 | 157 | 4 | 142 | 3.45e-23 | 99.8 |
Msa0333450 | AT2G33480.3 | 46.667 | 105 | 53 | 2 | 76 | 179 | 8 | 110 | 7.69e-23 | 95.9 |
Msa0333450 | AT3G04420.2 | 40.157 | 127 | 71 | 3 | 24 | 145 | 4 | 130 | 1.12e-22 | 97.1 |
Msa0333450 | AT3G04420.1 | 40.157 | 127 | 71 | 3 | 24 | 145 | 4 | 130 | 2.16e-22 | 97.4 |
Msa0333450 | AT4G01550.1 | 37.500 | 160 | 84 | 6 | 26 | 177 | 7 | 158 | 5.70e-22 | 97.4 |
Msa0333450 | AT1G02250.1 | 37.209 | 129 | 72 | 4 | 24 | 145 | 4 | 130 | 6.27e-21 | 93.6 |
Msa0333450 | AT5G22380.1 | 38.281 | 128 | 71 | 3 | 26 | 145 | 8 | 135 | 5.10e-20 | 88.6 |
Msa0333450 | AT3G44350.2 | 32.919 | 161 | 100 | 4 | 22 | 175 | 4 | 163 | 5.45e-20 | 88.6 |
Msa0333450 | AT4G01520.1 | 37.594 | 133 | 73 | 5 | 24 | 147 | 5 | 136 | 9.28e-20 | 89.0 |
Msa0333450 | AT3G44350.1 | 36.364 | 132 | 77 | 3 | 22 | 146 | 4 | 135 | 1.54e-19 | 85.1 |
Msa0333450 | AT4G01540.4 | 37.405 | 131 | 72 | 5 | 26 | 147 | 7 | 136 | 2.21e-18 | 86.3 |
Msa0333450 | AT4G01540.3 | 37.405 | 131 | 72 | 5 | 26 | 147 | 7 | 136 | 2.31e-18 | 86.7 |
Msa0333450 | AT4G01540.1 | 37.405 | 131 | 72 | 5 | 26 | 147 | 7 | 136 | 4.32e-18 | 85.9 |
Msa0333450 | AT5G64530.2 | 36.719 | 128 | 66 | 3 | 23 | 147 | 3 | 118 | 4.76e-18 | 80.9 |
Msa0333450 | AT4G01540.2 | 37.405 | 131 | 72 | 5 | 26 | 147 | 7 | 136 | 5.16e-18 | 85.5 |
Msa0333450 | AT5G64530.1 | 32.121 | 165 | 85 | 4 | 23 | 172 | 3 | 155 | 6.86e-18 | 81.3 |
Msa0333450 | AT1G02220.1 | 37.795 | 127 | 71 | 4 | 24 | 145 | 4 | 127 | 8.72e-18 | 84.7 |
Msa0333450 | AT3G10490.4 | 51.807 | 83 | 36 | 3 | 96 | 176 | 2 | 82 | 5.59e-16 | 79.0 |
Msa0333450 | AT3G10490.3 | 51.807 | 83 | 36 | 3 | 96 | 176 | 2 | 82 | 5.59e-16 | 79.0 |
Msa0333450 | AT2G18060.2 | 45.055 | 91 | 39 | 3 | 101 | 187 | 2 | 85 | 6.97e-16 | 77.4 |
Msa0333450 | AT5G14000.1 | 32.919 | 161 | 98 | 4 | 18 | 175 | 10 | 163 | 4.49e-15 | 73.9 |
Msa0333450 | AT1G01010.1 | 33.939 | 165 | 87 | 8 | 26 | 177 | 6 | 161 | 2.37e-14 | 74.7 |
Msa0333450 | AT5G14000.2 | 35.556 | 135 | 82 | 3 | 18 | 149 | 10 | 142 | 9.97e-14 | 68.9 |
Msa0333450 | AT2G43000.2 | 31.915 | 141 | 84 | 5 | 84 | 214 | 1 | 139 | 2.07e-13 | 68.9 |
Msa0333450 | AT5G50820.1 | 34.783 | 138 | 73 | 5 | 17 | 147 | 11 | 138 | 3.58e-13 | 68.2 |
Msa0333450 | AT1G28470.1 | 33.333 | 183 | 93 | 10 | 8 | 170 | 61 | 234 | 2.32e-12 | 67.8 |
Msa0333450 | AT3G56530.1 | 32.308 | 130 | 84 | 3 | 23 | 148 | 52 | 181 | 3.61e-12 | 67.0 |
Msa0333450 | AT3G55210.1 | 30.303 | 165 | 90 | 8 | 23 | 170 | 11 | 167 | 7.42e-11 | 62.8 |
Find 88 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCTGAGTTTGAGGCTATTT+TGG | 0.142515 | 2_4:+51213220 | None:intergenic |
GAGCAACAGAAGCTGGTTAT+TGG | 0.282927 | 2_4:-51214137 | Msa0333450:CDS |
CTTTAGATCAGTGTTGTTGC+TGG | 0.285167 | 2_4:+51213058 | None:intergenic |
GGTCTTAACATTGGAGGATT+AGG | 0.286533 | 2_4:-51212714 | Msa0333450:CDS |
GTGGTGATATTCTTGGTGGC+TGG | 0.323001 | 2_4:-51212782 | Msa0333450:CDS |
TGAACCAAGTTCACCTTCTT+CGG | 0.335807 | 2_4:-51213171 | Msa0333450:CDS |
AAGACTCATGCTGTTGTTGC+TGG | 0.361273 | 2_4:+51213199 | None:intergenic |
CTGTTGAAGTTGTTGTGAAC+AGG | 0.367511 | 2_4:+51212987 | None:intergenic |
TCCATTGTTGCATTCATAGA+AGG | 0.370477 | 2_4:+51212933 | None:intergenic |
CAAAAGAGTAACACTGGAAA+TGG | 0.388031 | 2_4:-51213287 | Msa0333450:CDS |
TGGTGATATTCTTGGTGGCT+GGG | 0.390544 | 2_4:-51212781 | Msa0333450:CDS |
GGTGGTGGTGGTGATATTCT+TGG | 0.402391 | 2_4:-51212789 | Msa0333450:CDS |
TTTGATTCATGAAGGATGAA+TGG | 0.408000 | 2_4:-51213328 | Msa0333450:intron |
TTTAACAGAGAAAGCTAAGA+TGG | 0.415039 | 2_4:-51214226 | Msa0333450:intron |
AGGCTGCGCCGCAGCCGCCG+AGG | 0.437536 | 2_4:+51212818 | None:intergenic |
GGTGATATTCTTGGTGGCTG+GGG | 0.437635 | 2_4:-51212780 | Msa0333450:CDS |
GCTGGTTATTGGAAAGCAAC+TGG | 0.441483 | 2_4:-51214126 | Msa0333450:CDS |
GTGGTGGTTGACAGTGGTGG+TGG | 0.451556 | 2_4:-51212735 | Msa0333450:CDS |
GGATGCCGGCGGAGGAGCAA+AGG | 0.452173 | 2_4:-51212758 | Msa0333450:CDS |
GAAGAAGGTGAACTTGGTTC+AGG | 0.456980 | 2_4:+51213173 | None:intergenic |
TGTAGATGTTGTGGAGAAAC+AGG | 0.459674 | 2_4:+51213025 | None:intergenic |
TTGATTCATGAAGGATGAAT+GGG | 0.460212 | 2_4:-51213327 | Msa0333450:intron |
GGCGGAGGAGCAAAGGGTGG+TGG | 0.469260 | 2_4:-51212751 | Msa0333450:CDS |
GCTAGGTTTCAGAGGAATGT+TGG | 0.470321 | 2_4:-51212903 | Msa0333450:CDS |
TACTGTTGTTGTTCATGTGA+TGG | 0.472131 | 2_4:+51214484 | None:intergenic |
TGTTCATGTGATGGTGGTGA+TGG | 0.472632 | 2_4:+51214493 | None:intergenic |
AAGAATATCACCACCACCAC+CGG | 0.475241 | 2_4:+51212791 | None:intergenic |
GTTGTTGCTGGCTGAGTTTG+AGG | 0.477482 | 2_4:+51213211 | None:intergenic |
GTGATGAGTTCTTCATCTGT+TGG | 0.479915 | 2_4:+51214417 | None:intergenic |
TGATGAGTTCTTCATCTGTT+GGG | 0.481156 | 2_4:+51214418 | None:intergenic |
CGTGATAGAAAGTATCCAAC+TGG | 0.482620 | 2_4:-51214174 | Msa0333450:CDS |
GATGCCGGCGGAGGAGCAAA+GGG | 0.483796 | 2_4:-51212757 | Msa0333450:CDS |
TCACCACCACCACCGGGAAA+AGG | 0.484638 | 2_4:+51212798 | None:intergenic |
CTCTACCTCTATAGAAAACA+AGG | 0.487385 | 2_4:+51214047 | None:intergenic |
TTCCTCTGAAACCTAGCAAA+AGG | 0.489285 | 2_4:+51212909 | None:intergenic |
ACCACTTGTGGTGGCTGTCA+CGG | 0.492729 | 2_4:+51213256 | None:intergenic |
CAGCAACAACACTGATCTAA+AGG | 0.495202 | 2_4:-51213057 | Msa0333450:CDS |
ATGCATGAATACCGTCTTGA+AGG | 0.495598 | 2_4:-51213995 | Msa0333450:CDS |
GCGGTGCTAGCTGCGGTGTA+AGG | 0.495882 | 2_4:+51213119 | None:intergenic |
CTTCTGAGCTTGACTGCATG+TGG | 0.509536 | 2_4:-51212689 | Msa0333450:CDS |
GTGATATTCTTGGTGGCTGG+GGG | 0.509670 | 2_4:-51212779 | Msa0333450:CDS |
GGAGATGAATCAAGAAGAGG+TGG | 0.516437 | 2_4:+51213140 | None:intergenic |
ACAAATAGAGCAACAGAAGC+TGG | 0.519833 | 2_4:-51214144 | Msa0333450:CDS |
TAAACCGAAGAAGGTGAACT+TGG | 0.530916 | 2_4:+51213167 | None:intergenic |
GTTGAGATCAACTTCAGCTA+TGG | 0.539738 | 2_4:+51214347 | None:intergenic |
ACCACCCTTTGCTCCTCCGC+CGG | 0.540834 | 2_4:+51212753 | None:intergenic |
GGTGGTGGTCTTAACATTGG+AGG | 0.544599 | 2_4:-51212720 | Msa0333450:CDS |
GCTAGCACCGCCACATTCAA+CGG | 0.550143 | 2_4:-51213107 | Msa0333450:CDS |
GGTGGAAGGTAAACCGAAGA+AGG | 0.552129 | 2_4:+51213158 | None:intergenic |
TCTTGTAGTGACCTCAAGCT+AGG | 0.554276 | 2_4:+51212867 | None:intergenic |
TTATTACCAGGTAGCTCCCA+TGG | 0.555008 | 2_4:+51214315 | None:intergenic |
ACCTTCTATGAATGCAACAA+TGG | 0.562153 | 2_4:-51212934 | Msa0333450:CDS |
CTATTTGTACGCAAACCAGT+TGG | 0.564828 | 2_4:+51214159 | None:intergenic |
GTTTGATGTTGTAGATGTTG+TGG | 0.565829 | 2_4:+51213016 | None:intergenic |
TTAACAGAGAAAGCTAAGAT+GGG | 0.570864 | 2_4:-51214225 | Msa0333450:intron |
TATGGCTCTTGCAGTGAAAG+TGG | 0.573657 | 2_4:+51214365 | None:intergenic |
CATTTGACCACCGTTGAATG+TGG | 0.575010 | 2_4:+51213097 | None:intergenic |
TGTGAACCATGGGAGCTACC+TGG | 0.581438 | 2_4:-51214321 | Msa0333450:intron |
CTAAGATGGGTGAGAAAGAG+TGG | 0.584550 | 2_4:-51214212 | Msa0333450:CDS |
TGTTGTTGTTCATGTGATGG+TGG | 0.584890 | 2_4:+51214487 | None:intergenic |
GGTGGTGGTGATATTCTTGG+TGG | 0.588306 | 2_4:-51212786 | Msa0333450:CDS |
TAAGGAGATGAATCAAGAAG+AGG | 0.594247 | 2_4:+51213137 | None:intergenic |
AGTGATGCACATTTACCACC+TGG | 0.600350 | 2_4:-51214453 | Msa0333450:CDS |
TCTCAACAAGTGTGAACCAT+GGG | 0.603575 | 2_4:-51214331 | Msa0333450:CDS |
ATGAATCAAGAAGAGGTGGA+AGG | 0.605273 | 2_4:+51213144 | None:intergenic |
AGGGTGGTGGTTGACAGTGG+TGG | 0.606408 | 2_4:-51212738 | Msa0333450:CDS |
TGTTGAAGTTGTTGTGAACA+GGG | 0.610500 | 2_4:+51212988 | None:intergenic |
CAAAGGGTGGTGGTTGACAG+TGG | 0.611515 | 2_4:-51212741 | Msa0333450:CDS |
GTGTTTCAAAAGAGTAACAC+TGG | 0.613580 | 2_4:-51213293 | Msa0333450:CDS |
ACCGTGACAGCCACCACAAG+TGG | 0.620040 | 2_4:-51213257 | Msa0333450:CDS |
AACTTCAACAGCAACAACAA+TGG | 0.620078 | 2_4:-51212975 | Msa0333450:CDS |
GCCGGCGGAGGAGCAAAGGG+TGG | 0.622038 | 2_4:-51212754 | Msa0333450:CDS |
AGAATATCACCACCACCACC+GGG | 0.622329 | 2_4:+51212792 | None:intergenic |
GTTGGGTGGAAACGAAAACC+AGG | 0.623151 | 2_4:+51214435 | None:intergenic |
AAGCAAATTTGCCTTCAAGA+CGG | 0.624374 | 2_4:+51213984 | None:intergenic |
GTACCTTGGAGTTTCTAGAG+AGG | 0.626435 | 2_4:+51213954 | None:intergenic |
TATAGAGGTAGAGCTCCTAA+AGG | 0.627496 | 2_4:-51214037 | Msa0333450:CDS |
CTTCCTCTCTAGAAACTCCA+AGG | 0.629367 | 2_4:-51213957 | Msa0333450:intron |
TGAGTTCTTCATCTGTTGGG+TGG | 0.631374 | 2_4:+51214421 | None:intergenic |
ACTTGTGGTGGCTGTCACGG+TGG | 0.643257 | 2_4:+51213259 | None:intergenic |
AGTGGTGGTGGTCTTAACAT+TGG | 0.644378 | 2_4:-51212723 | Msa0333450:CDS |
ATCTCAACAAGTGTGAACCA+TGG | 0.644661 | 2_4:-51214332 | Msa0333450:CDS |
GTGACAGCCACCACAAGTGG+TGG | 0.646314 | 2_4:-51213254 | Msa0333450:CDS |
GAATGTGGCGGTGCTAGCTG+CGG | 0.660317 | 2_4:+51213112 | None:intergenic |
TTGACCACCGTTGAATGTGG+CGG | 0.686693 | 2_4:+51213100 | None:intergenic |
TCTACCTCTATAGAAAACAA+GGG | 0.693978 | 2_4:+51214048 | None:intergenic |
AGCACCGCCACATTCAACGG+TGG | 0.735822 | 2_4:-51213104 | Msa0333450:CDS |
GGGTGGAAACGAAAACCAGG+TGG | 0.775610 | 2_4:+51214438 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTGAAAAATTAATGTGAA+TGG | + | chr2_4:51213637-51213656 | None:intergenic | 15.0% |
!!! | TTTTGAAAAATTAATGTGAA+TGG | + | chr2_4:51213637-51213656 | None:intergenic | 15.0% |
!! | AAAATTAATGTGAATGGTTA+TGG | + | chr2_4:51213631-51213650 | None:intergenic | 20.0% |
!! | AAAATTAATGTGAATGGTTA+TGG | + | chr2_4:51213631-51213650 | None:intergenic | 20.0% |
!! | ATTGATGATAAGTTATTACC+AGG | + | chr2_4:51212887-51212906 | None:intergenic | 25.0% |
!! | AACTTTTCTAACACTTTGTT+TGG | - | chr2_4:51212934-51212953 | Msa0333450:CDS | 25.0% |
! | TAAAGGTGAAAAAAGTAACT+GGG | - | chr2_4:51213167-51213186 | Msa0333450:CDS | 25.0% |
! | GTACAAAACACTTGAAATTA+AGG | + | chr2_4:51213325-51213344 | None:intergenic | 25.0% |
!! | CTGTTTATAAAGTGAGATTT+TGG | + | chr2_4:51213773-51213792 | None:intergenic | 25.0% |
!!! | CATGAATTTTTGATTCATGA+AGG | - | chr2_4:51213851-51213870 | Msa0333450:intron | 25.0% |
!! | ATTGATGATAAGTTATTACC+AGG | + | chr2_4:51212887-51212906 | None:intergenic | 25.0% |
!! | AACTTTTCTAACACTTTGTT+TGG | - | chr2_4:51212934-51212953 | Msa0333450:CDS | 25.0% |
! | TAAAGGTGAAAAAAGTAACT+GGG | - | chr2_4:51213167-51213186 | Msa0333450:CDS | 25.0% |
! | GTACAAAACACTTGAAATTA+AGG | + | chr2_4:51213325-51213344 | None:intergenic | 25.0% |
!! | CTGTTTATAAAGTGAGATTT+TGG | + | chr2_4:51213773-51213792 | None:intergenic | 25.0% |
!!! | CATGAATTTTTGATTCATGA+AGG | - | chr2_4:51213851-51213870 | Msa0333450:intron | 25.0% |
!!! | TGTCAAGAACTTTTTTGAGA+AGG | + | chr2_4:51212802-51212821 | None:intergenic | 30.0% |
TTTAACAGAGAAAGCTAAGA+TGG | - | chr2_4:51212961-51212980 | Msa0333450:CDS | 30.0% | |
TTAACAGAGAAAGCTAAGAT+GGG | - | chr2_4:51212962-51212981 | Msa0333450:CDS | 30.0% | |
TCAAAAACTTACTCTCTTGT+TGG | - | chr2_4:51213105-51213124 | Msa0333450:CDS | 30.0% | |
!!! | AAAACCCTTGTTTTCTATAG+AGG | - | chr2_4:51213135-51213154 | Msa0333450:CDS | 30.0% |
TCTACCTCTATAGAAAACAA+GGG | + | chr2_4:51213142-51213161 | None:intergenic | 30.0% | |
!!! | CAGTTACTTTTTTCACCTTT+AGG | + | chr2_4:51213168-51213187 | None:intergenic | 30.0% |
CTAAAGGTGAAAAAAGTAAC+TGG | - | chr2_4:51213166-51213185 | Msa0333450:CDS | 30.0% | |
TGACAGAAAAATTAGTACCT+TGG | + | chr2_4:51213250-51213269 | None:intergenic | 30.0% | |
!! | CTTTTGAAAGGATCAAAATG+CGG | + | chr2_4:51213373-51213392 | None:intergenic | 30.0% |
!! | TATCTCTCTAGTCTTTTGAA+AGG | + | chr2_4:51213385-51213404 | None:intergenic | 30.0% |
TTTCAAAAGACTAGAGAGAT+AGG | - | chr2_4:51213384-51213403 | Msa0333450:intron | 30.0% | |
!!! | GGAATCTTGTTTTTCCTAAT+AGG | - | chr2_4:51213408-51213427 | Msa0333450:intron | 30.0% |
AATGCATATAGAAGCCTATT+AGG | + | chr2_4:51213425-51213444 | None:intergenic | 30.0% | |
TAATAGGCTTCTATATGCAT+TGG | - | chr2_4:51213424-51213443 | Msa0333450:intron | 30.0% | |
!! | GTTGATGATTTATCTCGATT+AGG | - | chr2_4:51213461-51213480 | Msa0333450:intron | 30.0% |
TGTTAATGGTTATTACCCTA+TGG | - | chr2_4:51213551-51213570 | Msa0333450:intron | 30.0% | |
CAAAATGAAACTGGTGAAAA+TGG | + | chr2_4:51213701-51213720 | None:intergenic | 30.0% | |
!! | TTTGGTAGAAAAAGCATTGT+TGG | + | chr2_4:51213755-51213774 | None:intergenic | 30.0% |
TTTGATTCATGAAGGATGAA+TGG | - | chr2_4:51213859-51213878 | Msa0333450:intron | 30.0% | |
TTGATTCATGAAGGATGAAT+GGG | - | chr2_4:51213860-51213879 | Msa0333450:intron | 30.0% | |
!!! | TGTCAAGAACTTTTTTGAGA+AGG | + | chr2_4:51212802-51212821 | None:intergenic | 30.0% |
TTTAACAGAGAAAGCTAAGA+TGG | - | chr2_4:51212961-51212980 | Msa0333450:CDS | 30.0% | |
TTAACAGAGAAAGCTAAGAT+GGG | - | chr2_4:51212962-51212981 | Msa0333450:CDS | 30.0% | |
TCAAAAACTTACTCTCTTGT+TGG | - | chr2_4:51213105-51213124 | Msa0333450:CDS | 30.0% | |
!!! | AAAACCCTTGTTTTCTATAG+AGG | - | chr2_4:51213135-51213154 | Msa0333450:CDS | 30.0% |
TCTACCTCTATAGAAAACAA+GGG | + | chr2_4:51213142-51213161 | None:intergenic | 30.0% | |
!!! | CAGTTACTTTTTTCACCTTT+AGG | + | chr2_4:51213168-51213187 | None:intergenic | 30.0% |
CTAAAGGTGAAAAAAGTAAC+TGG | - | chr2_4:51213166-51213185 | Msa0333450:CDS | 30.0% | |
TGACAGAAAAATTAGTACCT+TGG | + | chr2_4:51213250-51213269 | None:intergenic | 30.0% | |
!! | CTTTTGAAAGGATCAAAATG+CGG | + | chr2_4:51213373-51213392 | None:intergenic | 30.0% |
!! | TATCTCTCTAGTCTTTTGAA+AGG | + | chr2_4:51213385-51213404 | None:intergenic | 30.0% |
TTTCAAAAGACTAGAGAGAT+AGG | - | chr2_4:51213384-51213403 | Msa0333450:intron | 30.0% | |
!!! | GGAATCTTGTTTTTCCTAAT+AGG | - | chr2_4:51213408-51213427 | Msa0333450:intron | 30.0% |
AATGCATATAGAAGCCTATT+AGG | + | chr2_4:51213425-51213444 | None:intergenic | 30.0% | |
TAATAGGCTTCTATATGCAT+TGG | - | chr2_4:51213424-51213443 | Msa0333450:intron | 30.0% | |
!! | GTTGATGATTTATCTCGATT+AGG | - | chr2_4:51213461-51213480 | Msa0333450:intron | 30.0% |
TGTTAATGGTTATTACCCTA+TGG | - | chr2_4:51213551-51213570 | Msa0333450:intron | 30.0% | |
CAAAATGAAACTGGTGAAAA+TGG | + | chr2_4:51213701-51213720 | None:intergenic | 30.0% | |
!! | TTTGGTAGAAAAAGCATTGT+TGG | + | chr2_4:51213755-51213774 | None:intergenic | 30.0% |
TTTGATTCATGAAGGATGAA+TGG | - | chr2_4:51213859-51213878 | Msa0333450:intron | 30.0% | |
TTGATTCATGAAGGATGAAT+GGG | - | chr2_4:51213860-51213879 | Msa0333450:intron | 30.0% | |
! | TACTGTTGTTGTTCATGTGA+TGG | + | chr2_4:51212706-51212725 | None:intergenic | 35.0% |
TGATGAGTTCTTCATCTGTT+GGG | + | chr2_4:51212772-51212791 | None:intergenic | 35.0% | |
CTCTACCTCTATAGAAAACA+AGG | + | chr2_4:51213143-51213162 | None:intergenic | 35.0% | |
AAGCAAATTTGCCTTCAAGA+CGG | + | chr2_4:51213206-51213225 | None:intergenic | 35.0% | |
ACGCATCGTTTACATGTTAA+TGG | - | chr2_4:51213537-51213556 | Msa0333450:intron | 35.0% | |
AAACTCTTACATGCACCATA+GGG | + | chr2_4:51213569-51213588 | None:intergenic | 35.0% | |
TGTGAATACATGAGTTTGCA+TGG | - | chr2_4:51213602-51213621 | Msa0333450:intron | 35.0% | |
GTGAATACATGAGTTTGCAT+GGG | - | chr2_4:51213603-51213622 | Msa0333450:intron | 35.0% | |
! | TCACCAGTTTCATTTTGCAT+AGG | - | chr2_4:51213704-51213723 | Msa0333450:intron | 35.0% |
! | CACCAGTTTCATTTTGCATA+GGG | - | chr2_4:51213705-51213724 | Msa0333450:intron | 35.0% |
AACCCTATGCAAAATGAAAC+TGG | + | chr2_4:51213710-51213729 | None:intergenic | 35.0% | |
GTGTTTCAAAAGAGTAACAC+TGG | - | chr2_4:51213894-51213913 | Msa0333450:intron | 35.0% | |
CAAAAGAGTAACACTGGAAA+TGG | - | chr2_4:51213900-51213919 | Msa0333450:intron | 35.0% | |
TAAGGAGATGAATCAAGAAG+AGG | + | chr2_4:51214053-51214072 | None:intergenic | 35.0% | |
GTTTGATGTTGTAGATGTTG+TGG | + | chr2_4:51214174-51214193 | None:intergenic | 35.0% | |
TGTTGAAGTTGTTGTGAACA+GGG | + | chr2_4:51214202-51214221 | None:intergenic | 35.0% | |
AACTTCAACAGCAACAACAA+TGG | - | chr2_4:51214212-51214231 | Msa0333450:CDS | 35.0% | |
ACCTTCTATGAATGCAACAA+TGG | - | chr2_4:51214253-51214272 | Msa0333450:intron | 35.0% | |
TCCATTGTTGCATTCATAGA+AGG | + | chr2_4:51214257-51214276 | None:intergenic | 35.0% | |
! | TACTGTTGTTGTTCATGTGA+TGG | + | chr2_4:51212706-51212725 | None:intergenic | 35.0% |
TGATGAGTTCTTCATCTGTT+GGG | + | chr2_4:51212772-51212791 | None:intergenic | 35.0% | |
CTCTACCTCTATAGAAAACA+AGG | + | chr2_4:51213143-51213162 | None:intergenic | 35.0% | |
AAGCAAATTTGCCTTCAAGA+CGG | + | chr2_4:51213206-51213225 | None:intergenic | 35.0% | |
ACGCATCGTTTACATGTTAA+TGG | - | chr2_4:51213537-51213556 | Msa0333450:intron | 35.0% | |
AAACTCTTACATGCACCATA+GGG | + | chr2_4:51213569-51213588 | None:intergenic | 35.0% | |
TGTGAATACATGAGTTTGCA+TGG | - | chr2_4:51213602-51213621 | Msa0333450:intron | 35.0% | |
GTGAATACATGAGTTTGCAT+GGG | - | chr2_4:51213603-51213622 | Msa0333450:intron | 35.0% | |
! | TCACCAGTTTCATTTTGCAT+AGG | - | chr2_4:51213704-51213723 | Msa0333450:intron | 35.0% |
! | CACCAGTTTCATTTTGCATA+GGG | - | chr2_4:51213705-51213724 | Msa0333450:intron | 35.0% |
AACCCTATGCAAAATGAAAC+TGG | + | chr2_4:51213710-51213729 | None:intergenic | 35.0% | |
GTGTTTCAAAAGAGTAACAC+TGG | - | chr2_4:51213894-51213913 | Msa0333450:intron | 35.0% | |
CAAAAGAGTAACACTGGAAA+TGG | - | chr2_4:51213900-51213919 | Msa0333450:intron | 35.0% | |
TAAGGAGATGAATCAAGAAG+AGG | + | chr2_4:51214053-51214072 | None:intergenic | 35.0% | |
GTTTGATGTTGTAGATGTTG+TGG | + | chr2_4:51214174-51214193 | None:intergenic | 35.0% | |
TGTTGAAGTTGTTGTGAACA+GGG | + | chr2_4:51214202-51214221 | None:intergenic | 35.0% | |
AACTTCAACAGCAACAACAA+TGG | - | chr2_4:51214212-51214231 | Msa0333450:CDS | 35.0% | |
ACCTTCTATGAATGCAACAA+TGG | - | chr2_4:51214253-51214272 | Msa0333450:intron | 35.0% | |
TCCATTGTTGCATTCATAGA+AGG | + | chr2_4:51214257-51214276 | None:intergenic | 35.0% | |
! | TGTTGTTGTTCATGTGATGG+TGG | + | chr2_4:51212703-51212722 | None:intergenic | 40.0% |
GTGATGAGTTCTTCATCTGT+TGG | + | chr2_4:51212773-51212792 | None:intergenic | 40.0% | |
GTTGAGATCAACTTCAGCTA+TGG | + | chr2_4:51212843-51212862 | None:intergenic | 40.0% | |
ATCTCAACAAGTGTGAACCA+TGG | - | chr2_4:51212855-51212874 | Msa0333450:CDS | 40.0% | |
TCTCAACAAGTGTGAACCAT+GGG | - | chr2_4:51212856-51212875 | Msa0333450:CDS | 40.0% | |
!! | CGTGATAGAAAGTATCCAAC+TGG | - | chr2_4:51213013-51213032 | Msa0333450:CDS | 40.0% |
CTATTTGTACGCAAACCAGT+TGG | + | chr2_4:51213031-51213050 | None:intergenic | 40.0% | |
ACAAATAGAGCAACAGAAGC+TGG | - | chr2_4:51213043-51213062 | Msa0333450:CDS | 40.0% | |
TATAGAGGTAGAGCTCCTAA+AGG | - | chr2_4:51213150-51213169 | Msa0333450:CDS | 40.0% | |
ATGCATGAATACCGTCTTGA+AGG | - | chr2_4:51213192-51213211 | Msa0333450:CDS | 40.0% | |
CAAAAGACTAGAGAGATAGG+TGG | - | chr2_4:51213387-51213406 | Msa0333450:intron | 40.0% | |
GAAACTCTTACATGCACCAT+AGG | + | chr2_4:51213570-51213589 | None:intergenic | 40.0% | |
TGAACCAAGTTCACCTTCTT+CGG | - | chr2_4:51214016-51214035 | Msa0333450:CDS | 40.0% | |
TAAACCGAAGAAGGTGAACT+TGG | + | chr2_4:51214023-51214042 | None:intergenic | 40.0% | |
ATGAATCAAGAAGAGGTGGA+AGG | + | chr2_4:51214046-51214065 | None:intergenic | 40.0% | |
! | CTTTAGATCAGTGTTGTTGC+TGG | + | chr2_4:51214132-51214151 | None:intergenic | 40.0% |
CAGCAACAACACTGATCTAA+AGG | - | chr2_4:51214130-51214149 | Msa0333450:CDS | 40.0% | |
TGTAGATGTTGTGGAGAAAC+AGG | + | chr2_4:51214165-51214184 | None:intergenic | 40.0% | |
CTGTTGAAGTTGTTGTGAAC+AGG | + | chr2_4:51214203-51214222 | None:intergenic | 40.0% | |
! | CAACAATGGATCCTTTTGCT+AGG | - | chr2_4:51214267-51214286 | Msa0333450:intron | 40.0% |
! | ATCCTTTTGCTAGGTTTCAG+AGG | - | chr2_4:51214276-51214295 | Msa0333450:intron | 40.0% |
!! | TTCCTCTGAAACCTAGCAAA+AGG | + | chr2_4:51214281-51214300 | None:intergenic | 40.0% |
!! | TTTCTGCTTTTCCTAGCTTG+AGG | - | chr2_4:51214309-51214328 | Msa0333450:intron | 40.0% |
! | GCTTCCTTTCTTTTTCTCCT+CGG | - | chr2_4:51214352-51214371 | Msa0333450:CDS | 40.0% |
GGTCTTAACATTGGAGGATT+AGG | - | chr2_4:51214473-51214492 | Msa0333450:CDS | 40.0% | |
! | TGTTGTTGTTCATGTGATGG+TGG | + | chr2_4:51212703-51212722 | None:intergenic | 40.0% |
GTGATGAGTTCTTCATCTGT+TGG | + | chr2_4:51212773-51212792 | None:intergenic | 40.0% | |
GTTGAGATCAACTTCAGCTA+TGG | + | chr2_4:51212843-51212862 | None:intergenic | 40.0% | |
ATCTCAACAAGTGTGAACCA+TGG | - | chr2_4:51212855-51212874 | Msa0333450:CDS | 40.0% | |
TCTCAACAAGTGTGAACCAT+GGG | - | chr2_4:51212856-51212875 | Msa0333450:CDS | 40.0% | |
!! | CGTGATAGAAAGTATCCAAC+TGG | - | chr2_4:51213013-51213032 | Msa0333450:CDS | 40.0% |
CTATTTGTACGCAAACCAGT+TGG | + | chr2_4:51213031-51213050 | None:intergenic | 40.0% | |
ACAAATAGAGCAACAGAAGC+TGG | - | chr2_4:51213043-51213062 | Msa0333450:CDS | 40.0% | |
TATAGAGGTAGAGCTCCTAA+AGG | - | chr2_4:51213150-51213169 | Msa0333450:CDS | 40.0% | |
ATGCATGAATACCGTCTTGA+AGG | - | chr2_4:51213192-51213211 | Msa0333450:CDS | 40.0% | |
CAAAAGACTAGAGAGATAGG+TGG | - | chr2_4:51213387-51213406 | Msa0333450:intron | 40.0% | |
GAAACTCTTACATGCACCAT+AGG | + | chr2_4:51213570-51213589 | None:intergenic | 40.0% | |
TGAACCAAGTTCACCTTCTT+CGG | - | chr2_4:51214016-51214035 | Msa0333450:CDS | 40.0% | |
TAAACCGAAGAAGGTGAACT+TGG | + | chr2_4:51214023-51214042 | None:intergenic | 40.0% | |
ATGAATCAAGAAGAGGTGGA+AGG | + | chr2_4:51214046-51214065 | None:intergenic | 40.0% | |
! | CTTTAGATCAGTGTTGTTGC+TGG | + | chr2_4:51214132-51214151 | None:intergenic | 40.0% |
CAGCAACAACACTGATCTAA+AGG | - | chr2_4:51214130-51214149 | Msa0333450:CDS | 40.0% | |
TGTAGATGTTGTGGAGAAAC+AGG | + | chr2_4:51214165-51214184 | None:intergenic | 40.0% | |
CTGTTGAAGTTGTTGTGAAC+AGG | + | chr2_4:51214203-51214222 | None:intergenic | 40.0% | |
! | CAACAATGGATCCTTTTGCT+AGG | - | chr2_4:51214267-51214286 | Msa0333450:intron | 40.0% |
! | ATCCTTTTGCTAGGTTTCAG+AGG | - | chr2_4:51214276-51214295 | Msa0333450:intron | 40.0% |
!! | TTCCTCTGAAACCTAGCAAA+AGG | + | chr2_4:51214281-51214300 | None:intergenic | 40.0% |
!! | TTTCTGCTTTTCCTAGCTTG+AGG | - | chr2_4:51214309-51214328 | Msa0333450:intron | 40.0% |
! | GCTTCCTTTCTTTTTCTCCT+CGG | - | chr2_4:51214352-51214371 | Msa0333450:CDS | 40.0% |
GGTCTTAACATTGGAGGATT+AGG | - | chr2_4:51214473-51214492 | Msa0333450:CDS | 40.0% | |
!! | TGTTCATGTGATGGTGGTGA+TGG | + | chr2_4:51212697-51212716 | None:intergenic | 45.0% |
AGTGATGCACATTTACCACC+TGG | - | chr2_4:51212734-51212753 | Msa0333450:CDS | 45.0% | |
TGAGTTCTTCATCTGTTGGG+TGG | + | chr2_4:51212769-51212788 | None:intergenic | 45.0% | |
TATGGCTCTTGCAGTGAAAG+TGG | + | chr2_4:51212825-51212844 | None:intergenic | 45.0% | |
TTATTACCAGGTAGCTCCCA+TGG | + | chr2_4:51212875-51212894 | None:intergenic | 45.0% | |
CTAAGATGGGTGAGAAAGAG+TGG | - | chr2_4:51212975-51212994 | Msa0333450:CDS | 45.0% | |
GAGCAACAGAAGCTGGTTAT+TGG | - | chr2_4:51213050-51213069 | Msa0333450:CDS | 45.0% | |
GCTGGTTATTGGAAAGCAAC+TGG | - | chr2_4:51213061-51213080 | Msa0333450:CDS | 45.0% | |
! | CTTCCTCTCTAGAAACTCCA+AGG | - | chr2_4:51213230-51213249 | Msa0333450:CDS | 45.0% |
! | GTACCTTGGAGTTTCTAGAG+AGG | + | chr2_4:51213236-51213255 | None:intergenic | 45.0% |
!!! | CTTTTTTGCACCACCACTTG+TGG | + | chr2_4:51213946-51213965 | None:intergenic | 45.0% |
!! | GGCTGAGTTTGAGGCTATTT+TGG | + | chr2_4:51213970-51213989 | None:intergenic | 45.0% |
AAGACTCATGCTGTTGTTGC+TGG | + | chr2_4:51213991-51214010 | None:intergenic | 45.0% | |
GAAGAAGGTGAACTTGGTTC+AGG | + | chr2_4:51214017-51214036 | None:intergenic | 45.0% | |
GGAGATGAATCAAGAAGAGG+TGG | + | chr2_4:51214050-51214069 | None:intergenic | 45.0% | |
CATTTGACCACCGTTGAATG+TGG | + | chr2_4:51214093-51214112 | None:intergenic | 45.0% | |
GCTAGGTTTCAGAGGAATGT+TGG | - | chr2_4:51214284-51214303 | Msa0333450:intron | 45.0% | |
TCTTGTAGTGACCTCAAGCT+AGG | + | chr2_4:51214323-51214342 | None:intergenic | 45.0% | |
! | TCCTTTCTTTTTCTCCTCGG+CGG | - | chr2_4:51214355-51214374 | Msa0333450:CDS | 45.0% |
AAGAATATCACCACCACCAC+CGG | + | chr2_4:51214399-51214418 | None:intergenic | 45.0% | |
! | TGGTGATATTCTTGGTGGCT+GGG | - | chr2_4:51214406-51214425 | Msa0333450:CDS | 45.0% |
!! | AGTGGTGGTGGTCTTAACAT+TGG | - | chr2_4:51214464-51214483 | Msa0333450:CDS | 45.0% |
!! | TGTTCATGTGATGGTGGTGA+TGG | + | chr2_4:51212697-51212716 | None:intergenic | 45.0% |
AGTGATGCACATTTACCACC+TGG | - | chr2_4:51212734-51212753 | Msa0333450:CDS | 45.0% | |
TGAGTTCTTCATCTGTTGGG+TGG | + | chr2_4:51212769-51212788 | None:intergenic | 45.0% | |
TATGGCTCTTGCAGTGAAAG+TGG | + | chr2_4:51212825-51212844 | None:intergenic | 45.0% | |
TTATTACCAGGTAGCTCCCA+TGG | + | chr2_4:51212875-51212894 | None:intergenic | 45.0% | |
CTAAGATGGGTGAGAAAGAG+TGG | - | chr2_4:51212975-51212994 | Msa0333450:CDS | 45.0% | |
GAGCAACAGAAGCTGGTTAT+TGG | - | chr2_4:51213050-51213069 | Msa0333450:CDS | 45.0% | |
GCTGGTTATTGGAAAGCAAC+TGG | - | chr2_4:51213061-51213080 | Msa0333450:CDS | 45.0% | |
! | CTTCCTCTCTAGAAACTCCA+AGG | - | chr2_4:51213230-51213249 | Msa0333450:CDS | 45.0% |
! | GTACCTTGGAGTTTCTAGAG+AGG | + | chr2_4:51213236-51213255 | None:intergenic | 45.0% |
!!! | CTTTTTTGCACCACCACTTG+TGG | + | chr2_4:51213946-51213965 | None:intergenic | 45.0% |
!! | GGCTGAGTTTGAGGCTATTT+TGG | + | chr2_4:51213970-51213989 | None:intergenic | 45.0% |
AAGACTCATGCTGTTGTTGC+TGG | + | chr2_4:51213991-51214010 | None:intergenic | 45.0% | |
GAAGAAGGTGAACTTGGTTC+AGG | + | chr2_4:51214017-51214036 | None:intergenic | 45.0% | |
GGAGATGAATCAAGAAGAGG+TGG | + | chr2_4:51214050-51214069 | None:intergenic | 45.0% | |
CATTTGACCACCGTTGAATG+TGG | + | chr2_4:51214093-51214112 | None:intergenic | 45.0% | |
GCTAGGTTTCAGAGGAATGT+TGG | - | chr2_4:51214284-51214303 | Msa0333450:intron | 45.0% | |
TCTTGTAGTGACCTCAAGCT+AGG | + | chr2_4:51214323-51214342 | None:intergenic | 45.0% | |
! | TCCTTTCTTTTTCTCCTCGG+CGG | - | chr2_4:51214355-51214374 | Msa0333450:CDS | 45.0% |
AAGAATATCACCACCACCAC+CGG | + | chr2_4:51214399-51214418 | None:intergenic | 45.0% | |
! | TGGTGATATTCTTGGTGGCT+GGG | - | chr2_4:51214406-51214425 | Msa0333450:CDS | 45.0% |
!! | AGTGGTGGTGGTCTTAACAT+TGG | - | chr2_4:51214464-51214483 | Msa0333450:CDS | 45.0% |
GTTGGGTGGAAACGAAAACC+AGG | + | chr2_4:51212755-51212774 | None:intergenic | 50.0% | |
! | TTTTGCACCACCACTTGTGG+TGG | + | chr2_4:51213943-51213962 | None:intergenic | 50.0% |
! | GTTGTTGCTGGCTGAGTTTG+AGG | + | chr2_4:51213979-51213998 | None:intergenic | 50.0% |
GGTGGAAGGTAAACCGAAGA+AGG | + | chr2_4:51214032-51214051 | None:intergenic | 50.0% | |
TTGACCACCGTTGAATGTGG+CGG | + | chr2_4:51214090-51214109 | None:intergenic | 50.0% | |
AGAATATCACCACCACCACC+GGG | + | chr2_4:51214398-51214417 | None:intergenic | 50.0% | |
!! | GGTGGTGGTGGTGATATTCT+TGG | - | chr2_4:51214398-51214417 | Msa0333450:CDS | 50.0% |
! | GGTGGTGGTGATATTCTTGG+TGG | - | chr2_4:51214401-51214420 | Msa0333450:CDS | 50.0% |
! | GTGGTGATATTCTTGGTGGC+TGG | - | chr2_4:51214405-51214424 | Msa0333450:CDS | 50.0% |
! | GGTGATATTCTTGGTGGCTG+GGG | - | chr2_4:51214407-51214426 | Msa0333450:CDS | 50.0% |
! | GTGATATTCTTGGTGGCTGG+GGG | - | chr2_4:51214408-51214427 | Msa0333450:CDS | 50.0% |
! | GGTGGTGGTCTTAACATTGG+AGG | - | chr2_4:51214467-51214486 | Msa0333450:CDS | 50.0% |
CTTCTGAGCTTGACTGCATG+TGG | - | chr2_4:51214498-51214517 | Msa0333450:CDS | 50.0% | |
GTTGGGTGGAAACGAAAACC+AGG | + | chr2_4:51212755-51212774 | None:intergenic | 50.0% | |
! | TTTTGCACCACCACTTGTGG+TGG | + | chr2_4:51213943-51213962 | None:intergenic | 50.0% |
! | GTTGTTGCTGGCTGAGTTTG+AGG | + | chr2_4:51213979-51213998 | None:intergenic | 50.0% |
GGTGGAAGGTAAACCGAAGA+AGG | + | chr2_4:51214032-51214051 | None:intergenic | 50.0% | |
TTGACCACCGTTGAATGTGG+CGG | + | chr2_4:51214090-51214109 | None:intergenic | 50.0% | |
AGAATATCACCACCACCACC+GGG | + | chr2_4:51214398-51214417 | None:intergenic | 50.0% | |
!! | GGTGGTGGTGGTGATATTCT+TGG | - | chr2_4:51214398-51214417 | Msa0333450:CDS | 50.0% |
! | GGTGGTGGTGATATTCTTGG+TGG | - | chr2_4:51214401-51214420 | Msa0333450:CDS | 50.0% |
! | GTGGTGATATTCTTGGTGGC+TGG | - | chr2_4:51214405-51214424 | Msa0333450:CDS | 50.0% |
! | GGTGATATTCTTGGTGGCTG+GGG | - | chr2_4:51214407-51214426 | Msa0333450:CDS | 50.0% |
! | GTGATATTCTTGGTGGCTGG+GGG | - | chr2_4:51214408-51214427 | Msa0333450:CDS | 50.0% |
! | GGTGGTGGTCTTAACATTGG+AGG | - | chr2_4:51214467-51214486 | Msa0333450:CDS | 50.0% |
CTTCTGAGCTTGACTGCATG+TGG | - | chr2_4:51214498-51214517 | Msa0333450:CDS | 50.0% | |
GGGTGGAAACGAAAACCAGG+TGG | + | chr2_4:51212752-51212771 | None:intergenic | 55.0% | |
TGTGAACCATGGGAGCTACC+TGG | - | chr2_4:51212866-51212885 | Msa0333450:CDS | 55.0% | |
ACCACTTGTGGTGGCTGTCA+CGG | + | chr2_4:51213934-51213953 | None:intergenic | 55.0% | |
GCTAGCACCGCCACATTCAA+CGG | - | chr2_4:51214080-51214099 | Msa0333450:intron | 55.0% | |
GCCGCCGAGGAGAAAAAGAA+AGG | + | chr2_4:51214359-51214378 | None:intergenic | 55.0% | |
! | CAAAGGGTGGTGGTTGACAG+TGG | - | chr2_4:51214446-51214465 | Msa0333450:CDS | 55.0% |
GGGTGGAAACGAAAACCAGG+TGG | + | chr2_4:51212752-51212771 | None:intergenic | 55.0% | |
TGTGAACCATGGGAGCTACC+TGG | - | chr2_4:51212866-51212885 | Msa0333450:CDS | 55.0% | |
ACCACTTGTGGTGGCTGTCA+CGG | + | chr2_4:51213934-51213953 | None:intergenic | 55.0% | |
GCTAGCACCGCCACATTCAA+CGG | - | chr2_4:51214080-51214099 | Msa0333450:intron | 55.0% | |
GCCGCCGAGGAGAAAAAGAA+AGG | + | chr2_4:51214359-51214378 | None:intergenic | 55.0% | |
! | CAAAGGGTGGTGGTTGACAG+TGG | - | chr2_4:51214446-51214465 | Msa0333450:CDS | 55.0% |
ACTTGTGGTGGCTGTCACGG+TGG | + | chr2_4:51213931-51213950 | None:intergenic | 60.0% | |
ACCGTGACAGCCACCACAAG+TGG | - | chr2_4:51213930-51213949 | Msa0333450:intron | 60.0% | |
GTGACAGCCACCACAAGTGG+TGG | - | chr2_4:51213933-51213952 | Msa0333450:intron | 60.0% | |
! | GAATGTGGCGGTGCTAGCTG+CGG | + | chr2_4:51214078-51214097 | None:intergenic | 60.0% |
AGCACCGCCACATTCAACGG+TGG | - | chr2_4:51214083-51214102 | Msa0333450:CDS | 60.0% | |
! | CTTTTTCTCCTCGGCGGCTG+CGG | - | chr2_4:51214361-51214380 | Msa0333450:CDS | 60.0% |
TCACCACCACCACCGGGAAA+AGG | + | chr2_4:51214392-51214411 | None:intergenic | 60.0% | |
! | AGGGTGGTGGTTGACAGTGG+TGG | - | chr2_4:51214449-51214468 | Msa0333450:CDS | 60.0% |
GTGGTGGTTGACAGTGGTGG+TGG | - | chr2_4:51214452-51214471 | Msa0333450:CDS | 60.0% | |
ACTTGTGGTGGCTGTCACGG+TGG | + | chr2_4:51213931-51213950 | None:intergenic | 60.0% | |
ACCGTGACAGCCACCACAAG+TGG | - | chr2_4:51213930-51213949 | Msa0333450:intron | 60.0% | |
GTGACAGCCACCACAAGTGG+TGG | - | chr2_4:51213933-51213952 | Msa0333450:intron | 60.0% | |
! | GAATGTGGCGGTGCTAGCTG+CGG | + | chr2_4:51214078-51214097 | None:intergenic | 60.0% |
AGCACCGCCACATTCAACGG+TGG | - | chr2_4:51214083-51214102 | Msa0333450:CDS | 60.0% | |
! | CTTTTTCTCCTCGGCGGCTG+CGG | - | chr2_4:51214361-51214380 | Msa0333450:CDS | 60.0% |
TCACCACCACCACCGGGAAA+AGG | + | chr2_4:51214392-51214411 | None:intergenic | 60.0% | |
! | AGGGTGGTGGTTGACAGTGG+TGG | - | chr2_4:51214449-51214468 | Msa0333450:CDS | 60.0% |
GTGGTGGTTGACAGTGGTGG+TGG | - | chr2_4:51214452-51214471 | Msa0333450:CDS | 60.0% | |
! | GCGGTGCTAGCTGCGGTGTA+AGG | + | chr2_4:51214071-51214090 | None:intergenic | 65.0% |
!! | CAGCCTTTTCCCGGTGGTGG+TGG | - | chr2_4:51214386-51214405 | Msa0333450:CDS | 65.0% |
! | TCTTGGTGGCTGGGGGATGC+CGG | - | chr2_4:51214415-51214434 | Msa0333450:CDS | 65.0% |
GATGCCGGCGGAGGAGCAAA+GGG | - | chr2_4:51214430-51214449 | Msa0333450:CDS | 65.0% | |
ACCACCCTTTGCTCCTCCGC+CGG | + | chr2_4:51214437-51214456 | None:intergenic | 65.0% | |
! | GCGGTGCTAGCTGCGGTGTA+AGG | + | chr2_4:51214071-51214090 | None:intergenic | 65.0% |
!! | CAGCCTTTTCCCGGTGGTGG+TGG | - | chr2_4:51214386-51214405 | Msa0333450:CDS | 65.0% |
! | TCTTGGTGGCTGGGGGATGC+CGG | - | chr2_4:51214415-51214434 | Msa0333450:CDS | 65.0% |
GATGCCGGCGGAGGAGCAAA+GGG | - | chr2_4:51214430-51214449 | Msa0333450:CDS | 65.0% | |
ACCACCCTTTGCTCCTCCGC+CGG | + | chr2_4:51214437-51214456 | None:intergenic | 65.0% | |
! | GCTGCGGCGCAGCCTTTTCC+CGG | - | chr2_4:51214377-51214396 | Msa0333450:CDS | 70.0% |
! | GCGCAGCCTTTTCCCGGTGG+TGG | - | chr2_4:51214383-51214402 | Msa0333450:CDS | 70.0% |
GGATGCCGGCGGAGGAGCAA+AGG | - | chr2_4:51214429-51214448 | Msa0333450:CDS | 70.0% | |
GGCGGAGGAGCAAAGGGTGG+TGG | - | chr2_4:51214436-51214455 | Msa0333450:CDS | 70.0% | |
! | GCTGCGGCGCAGCCTTTTCC+CGG | - | chr2_4:51214377-51214396 | Msa0333450:CDS | 70.0% |
! | GCGCAGCCTTTTCCCGGTGG+TGG | - | chr2_4:51214383-51214402 | Msa0333450:CDS | 70.0% |
GGATGCCGGCGGAGGAGCAA+AGG | - | chr2_4:51214429-51214448 | Msa0333450:CDS | 70.0% | |
GGCGGAGGAGCAAAGGGTGG+TGG | - | chr2_4:51214436-51214455 | Msa0333450:CDS | 70.0% | |
! | GCGGCGCAGCCTTTTCCCGG+TGG | - | chr2_4:51214380-51214399 | Msa0333450:CDS | 75.0% |
TGGTGGCTGGGGGATGCCGG+CGG | - | chr2_4:51214418-51214437 | Msa0333450:CDS | 75.0% | |
GCCGGCGGAGGAGCAAAGGG+TGG | - | chr2_4:51214433-51214452 | Msa0333450:CDS | 75.0% | |
! | GCGGCGCAGCCTTTTCCCGG+TGG | - | chr2_4:51214380-51214399 | Msa0333450:CDS | 75.0% |
TGGTGGCTGGGGGATGCCGG+CGG | - | chr2_4:51214418-51214437 | Msa0333450:CDS | 75.0% | |
GCCGGCGGAGGAGCAAAGGG+TGG | - | chr2_4:51214433-51214452 | Msa0333450:CDS | 75.0% | |
! | TGGCTGGGGGATGCCGGCGG+AGG | - | chr2_4:51214421-51214440 | Msa0333450:CDS | 80.0% |
! | TGGCTGGGGGATGCCGGCGG+AGG | - | chr2_4:51214421-51214440 | Msa0333450:CDS | 80.0% |
! | AGGCTGCGCCGCAGCCGCCG+AGG | + | chr2_4:51214372-51214391 | None:intergenic | 85.0% |
! | AGGCTGCGCCGCAGCCGCCG+AGG | + | chr2_4:51214372-51214391 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 51212680 | 51214529 | 51212680 | ID=Msa0333450;Name=Msa0333450 |
chr2_4 | mRNA | 51212680 | 51214529 | 51212680 | ID=Msa0333450-mRNA-1;Parent=Msa0333450;Name=Msa0333450-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.33|0|1|0.33|0.75|4|0|379 |
chr2_4 | exon | 51214322 | 51214529 | 51214322 | ID=Msa0333450-mRNA-1:exon:15309;Parent=Msa0333450-mRNA-1 |
chr2_4 | exon | 51214083 | 51214240 | 51214083 | ID=Msa0333450-mRNA-1:exon:15308;Parent=Msa0333450-mRNA-1 |
chr2_4 | exon | 51213958 | 51214074 | 51213958 | ID=Msa0333450-mRNA-1:exon:15307;Parent=Msa0333450-mRNA-1 |
chr2_4 | exon | 51212680 | 51213336 | 51212680 | ID=Msa0333450-mRNA-1:exon:15306;Parent=Msa0333450-mRNA-1 |
chr2_4 | CDS | 51214322 | 51214529 | 51214322 | ID=Msa0333450-mRNA-1:cds;Parent=Msa0333450-mRNA-1 |
chr2_4 | CDS | 51214083 | 51214240 | 51214083 | ID=Msa0333450-mRNA-1:cds;Parent=Msa0333450-mRNA-1 |
chr2_4 | CDS | 51213958 | 51214074 | 51213958 | ID=Msa0333450-mRNA-1:cds;Parent=Msa0333450-mRNA-1 |
chr2_4 | CDS | 51212680 | 51213336 | 51212680 | ID=Msa0333450-mRNA-1:cds;Parent=Msa0333450-mRNA-1 |
Gene Sequence |
Protein sequence |