Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379970 | KEH21174.1 | 94.286 | 35 | 1 | 1 | 32 | 65 | 13 | 47 | 8.72e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379970 | A0A072TUH2 | 94.286 | 35 | 1 | 1 | 32 | 65 | 13 | 47 | 4.16e-12 | 64.3 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa1379970 | 0.825480 | 4.580851e-54 | -8.615850e-47 |
| Msa0006980 | Msa1379970 | 0.802161 | 6.396658e-49 | -8.615850e-47 |
| Msa0015710 | Msa1379970 | 0.835547 | 1.575201e-56 | -8.615850e-47 |
| Msa0016120 | Msa1379970 | 0.836932 | 7.001214e-57 | -8.615850e-47 |
| Msa0019600 | Msa1379970 | 0.809743 | 1.627375e-50 | -8.615850e-47 |
| Msa0050040 | Msa1379970 | 0.822901 | 1.848791e-53 | -8.615850e-47 |
| Msa0055450 | Msa1379970 | 0.806370 | 8.502355e-50 | -8.615850e-47 |
| Msa0080990 | Msa1379970 | 0.852243 | 5.247019e-61 | -8.615850e-47 |
| Msa0102990 | Msa1379970 | 0.822742 | 2.012923e-53 | -8.615850e-47 |
| Msa0106790 | Msa1379970 | 0.809733 | 1.635530e-50 | -8.615850e-47 |
| Msa0109880 | Msa1379970 | 0.842895 | 1.955008e-58 | -8.615850e-47 |
| Msa0118400 | Msa1379970 | 0.818950 | 1.499870e-52 | -8.615850e-47 |
| Msa1345420 | Msa1379970 | 0.808352 | 3.230557e-50 | -8.615850e-47 |
| Msa1356990 | Msa1379970 | 0.836463 | 9.219155e-57 | -8.615850e-47 |
| Msa1378770 | Msa1379970 | 0.803432 | 3.496038e-49 | -8.615850e-47 |
| Msa1379970 | Msa1394890 | 0.854919 | 8.929701e-62 | -8.615850e-47 |
| Msa1379970 | Msa1406780 | 0.892924 | 1.013010e-74 | -8.615850e-47 |
| Msa1379970 | Msa1420060 | 0.817789 | 2.748642e-52 | -8.615850e-47 |
| Msa1379970 | Msa1421550 | 0.882977 | 6.622365e-71 | -8.615850e-47 |
| Msa1379970 | Msa1423460 | 0.850841 | 1.307829e-60 | -8.615850e-47 |
| Msa1379970 | Msa1424690 | 0.810546 | 1.092182e-50 | -8.615850e-47 |
| Msa1379970 | Msa1431850 | 0.895615 | 8.100002e-76 | -8.615850e-47 |
| Msa1379970 | Msa1435480 | 0.825684 | 4.099394e-54 | -8.615850e-47 |
| Msa1379970 | Msa1437700 | 0.816601 | 5.083024e-52 | -8.615850e-47 |
| Msa1379970 | Msa1437710 | 0.810406 | 1.171041e-50 | -8.615850e-47 |
| Msa1379970 | Msa1442630 | 0.812034 | 5.192469e-51 | -8.615850e-47 |
| Msa1379970 | Msa1449940 | 0.868912 | 4.589239e-66 | -8.615850e-47 |
| Msa1379970 | Msa1455320 | 0.816406 | 5.622012e-52 | -8.615850e-47 |
| Msa1379970 | Msa1459530 | 0.852933 | 3.335119e-61 | -8.615850e-47 |
| Msa1379970 | Msa1461060 | 0.842196 | 2.997329e-58 | -8.615850e-47 |
| Msa1379970 | Msa1462530 | 0.824397 | 8.252819e-54 | -8.615850e-47 |
| Msa0639460 | Msa1379970 | 0.805553 | 1.262470e-49 | -8.615850e-47 |
| Msa0641250 | Msa1379970 | 0.828261 | 9.916301e-55 | -8.615850e-47 |
| Msa0641360 | Msa1379970 | 0.819829 | 9.458044e-53 | -8.615850e-47 |
| Msa0669840 | Msa1379970 | 0.873132 | 1.863017e-67 | -8.615850e-47 |
| Msa0682360 | Msa1379970 | 0.802168 | 6.374864e-49 | -8.615850e-47 |
| Msa0682530 | Msa1379970 | 0.804464 | 2.133641e-49 | -8.615850e-47 |
| Msa0725860 | Msa1379970 | 0.816863 | 4.440655e-52 | -8.615850e-47 |
| Msa0737190 | Msa1379970 | 0.819090 | 1.394255e-52 | -8.615850e-47 |
| Msa0737320 | Msa1379970 | 0.800313 | 1.528016e-48 | -8.615850e-47 |
| Msa0739580 | Msa1379970 | 0.888551 | 5.341945e-73 | -8.615850e-47 |
| Msa0742180 | Msa1379970 | 0.818029 | 2.425386e-52 | -8.615850e-47 |
| Msa0748000 | Msa1379970 | 0.852337 | 4.931672e-61 | -8.615850e-47 |
| Msa0770290 | Msa1379970 | 0.822841 | 1.908979e-53 | -8.615850e-47 |
| Msa0778930 | Msa1379970 | 0.808156 | 3.556625e-50 | -8.615850e-47 |
| Msa0782360 | Msa1379970 | 0.861902 | 7.401079e-64 | -8.615850e-47 |
| Msa0786040 | Msa1379970 | 0.817358 | 3.437064e-52 | -8.615850e-47 |
| Msa0823400 | Msa1379970 | 0.847321 | 1.244917e-59 | -8.615850e-47 |
| Msa0828830 | Msa1379970 | 0.855956 | 4.452313e-62 | -8.615850e-47 |
| Msa0124130 | Msa1379970 | 0.825230 | 5.250393e-54 | -8.615850e-47 |
| Msa0141600 | Msa1379970 | 0.800174 | 1.631168e-48 | -8.615850e-47 |
| Msa0147600 | Msa1379970 | 0.802528 | 5.376234e-49 | -8.615850e-47 |
| Msa0149140 | Msa1379970 | 0.825693 | 4.078044e-54 | -8.615850e-47 |
| Msa0152480 | Msa1379970 | 0.803753 | 2.998532e-49 | -8.615850e-47 |
| Msa0152500 | Msa1379970 | 0.820795 | 5.679380e-53 | -8.615850e-47 |
| Msa0156250 | Msa1379970 | 0.860336 | 2.217688e-63 | -8.615850e-47 |
| Msa0161680 | Msa1379970 | 0.802767 | 4.798379e-49 | -8.615850e-47 |
| Msa0185490 | Msa1379970 | 0.849113 | 3.982800e-60 | -8.615850e-47 |
| Msa0194380 | Msa1379970 | 0.806561 | 7.746987e-50 | -8.615850e-47 |
| Msa0197100 | Msa1379970 | 0.840121 | 1.052286e-57 | -8.615850e-47 |
| Msa0203030 | Msa1379970 | 0.813325 | 2.710220e-51 | -8.615850e-47 |
| Msa0212150 | Msa1379970 | 0.893820 | 4.402360e-75 | -8.615850e-47 |
| Msa0215640 | Msa1379970 | 0.834858 | 2.349803e-56 | -8.615850e-47 |
| Msa0221290 | Msa1379970 | 0.809883 | 1.518350e-50 | -8.615850e-47 |
| Msa0236110 | Msa1379970 | 0.833543 | 5.022141e-56 | -8.615850e-47 |
| Msa1228190 | Msa1379970 | 0.887797 | 1.040363e-72 | -8.615850e-47 |
| Msa1232730 | Msa1379970 | 0.815243 | 1.021470e-51 | -8.615850e-47 |
| Msa1233560 | Msa1379970 | 0.818549 | 1.849965e-52 | -8.615850e-47 |
| Msa1243020 | Msa1379970 | 0.801102 | 1.054700e-48 | -8.615850e-47 |
| Msa1271260 | Msa1379970 | 0.866489 | 2.746523e-65 | -8.615850e-47 |
| Msa1277400 | Msa1379970 | 0.814476 | 1.511041e-51 | -8.615850e-47 |
| Msa1285900 | Msa1379970 | 0.806127 | 9.567329e-50 | -8.615850e-47 |
| Msa1294290 | Msa1379970 | 0.859173 | 4.966985e-63 | -8.615850e-47 |
| Msa1305310 | Msa1379970 | 0.809112 | 2.222323e-50 | -8.615850e-47 |
| Msa1305510 | Msa1379970 | 0.855627 | 5.558307e-62 | -8.615850e-47 |
| Msa1307150 | Msa1379970 | 0.821643 | 3.621055e-53 | -8.615850e-47 |
| Msa1307190 | Msa1379970 | 0.845021 | 5.264985e-59 | -8.615850e-47 |
| Msa1313970 | Msa1379970 | 0.805595 | 1.237251e-49 | -8.615850e-47 |
| Msa1339580 | Msa1379970 | 0.816656 | 4.941227e-52 | -8.615850e-47 |
| Msa0373960 | Msa1379970 | 0.849548 | 3.013171e-60 | -8.615850e-47 |
| Msa0375680 | Msa1379970 | 0.817675 | 2.916531e-52 | -8.615850e-47 |
| Msa0384910 | Msa1379970 | 0.809353 | 1.973639e-50 | -8.615850e-47 |
| Msa0392420 | Msa1379970 | 0.810746 | 9.890752e-51 | -8.615850e-47 |
| Msa0392460 | Msa1379970 | 0.801383 | 9.240579e-49 | -8.615850e-47 |
| Msa0392490 | Msa1379970 | 0.801809 | 7.558001e-49 | -8.615850e-47 |
| Msa0406000 | Msa1379970 | 0.891870 | 2.675566e-74 | -8.615850e-47 |
| Msa0423100 | Msa1379970 | 0.820399 | 7.003294e-53 | -8.615850e-47 |
| Msa0424330 | Msa1379970 | 0.841617 | 4.262345e-58 | -8.615850e-47 |
| Msa0424340 | Msa1379970 | 0.835169 | 1.962639e-56 | -8.615850e-47 |
| Msa0424350 | Msa1379970 | 0.818137 | 2.293080e-52 | -8.615850e-47 |
| Msa0436500 | Msa1379970 | 0.838163 | 3.384935e-57 | -8.615850e-47 |
| Msa0451400 | Msa1379970 | 0.895174 | 1.231525e-75 | -8.615850e-47 |
| Msa0471240 | Msa1379970 | 0.801807 | 7.564659e-49 | -8.615850e-47 |
| Msa0996270 | Msa1379970 | 0.812387 | 4.350264e-51 | -8.615850e-47 |
| Msa0999300 | Msa1379970 | 0.876267 | 1.599025e-68 | -8.615850e-47 |
| Msa0999320 | Msa1379970 | 0.808174 | 3.525908e-50 | -8.615850e-47 |
| Msa0999340 | Msa1379970 | 0.819160 | 1.343589e-52 | -8.615850e-47 |
| Msa0999350 | Msa1379970 | 0.843403 | 1.431788e-58 | -8.615850e-47 |
| Msa0999360 | Msa1379970 | 0.856706 | 2.683569e-62 | -8.615850e-47 |
| Msa0999390 | Msa1379970 | 0.800587 | 1.344112e-48 | -8.615850e-47 |
| Msa0999400 | Msa1379970 | 0.836150 | 1.107306e-56 | -8.615850e-47 |
| Msa0999410 | Msa1379970 | 0.849720 | 2.698554e-60 | -8.615850e-47 |
| Msa1001870 | Msa1379970 | 0.807782 | 4.272294e-50 | -8.615850e-47 |
| Msa1001890 | Msa1379970 | 0.839361 | 1.659590e-57 | -8.615850e-47 |
| Msa1005360 | Msa1379970 | 0.805512 | 1.288068e-49 | -8.615850e-47 |
| Msa1016600 | Msa1379970 | 0.827128 | 1.855754e-54 | -8.615850e-47 |
| Msa1034680 | Msa1379970 | 0.832621 | 8.517128e-56 | -8.615850e-47 |
| Msa1037770 | Msa1379970 | 0.845854 | 3.131385e-59 | -8.615850e-47 |
| Msa1037890 | Msa1379970 | 0.807898 | 4.037058e-50 | -8.615850e-47 |
| Msa1037900 | Msa1379970 | 0.827802 | 1.279449e-54 | -8.615850e-47 |
| Msa1037910 | Msa1379970 | 0.826080 | 3.300515e-54 | -8.615850e-47 |
| Msa1041530 | Msa1379970 | 0.805617 | 1.224494e-49 | -8.615850e-47 |
| Msa1052360 | Msa1379970 | 0.806051 | 9.922777e-50 | -8.615850e-47 |
| Msa1070420 | Msa1379970 | 0.814564 | 1.445105e-51 | -8.615850e-47 |
| Msa1077180 | Msa1379970 | 0.802744 | 4.850646e-49 | -8.615850e-47 |
| Msa1081570 | Msa1379970 | 0.817874 | 2.629218e-52 | -8.615850e-47 |
| Msa1084520 | Msa1379970 | 0.803140 | 4.018157e-49 | -8.615850e-47 |
| Msa1092020 | Msa1379970 | 0.829950 | 3.863591e-55 | -8.615850e-47 |
| Msa1096210 | Msa1379970 | 0.825127 | 5.551343e-54 | -8.615850e-47 |
| Msa0239030 | Msa1379970 | 0.839463 | 1.560906e-57 | -8.615850e-47 |
| Msa0252770 | Msa1379970 | 0.893610 | 5.354250e-75 | -8.615850e-47 |
| Msa0273990 | Msa1379970 | 0.807411 | 5.122732e-50 | -8.615850e-47 |
| Msa0276080 | Msa1379970 | 0.832430 | 9.496888e-56 | -8.615850e-47 |
| Msa0276740 | Msa1379970 | 0.828036 | 1.123759e-54 | -8.615850e-47 |
| Msa0289920 | Msa1379970 | 0.866925 | 1.995915e-65 | -8.615850e-47 |
| Msa0298240 | Msa1379970 | 0.815161 | 1.065363e-51 | -8.615850e-47 |
| Msa0306120 | Msa1379970 | 0.879300 | 1.394184e-69 | -8.615850e-47 |
| Msa0314630 | Msa1379970 | 0.833425 | 5.373240e-56 | -8.615850e-47 |
| Msa0316680 | Msa1379970 | 0.831250 | 1.856351e-55 | -8.615850e-47 |
| Msa0322830 | Msa1379970 | 0.837055 | 6.514782e-57 | -8.615850e-47 |
| Msa0322840 | Msa1379970 | 0.822540 | 2.242940e-53 | -8.615850e-47 |
| Msa0322860 | Msa1379970 | 0.829282 | 5.616816e-55 | -8.615850e-47 |
| Msa0329620 | Msa1379970 | 0.922448 | 9.704372e-89 | -8.615850e-47 |
| Msa0333450 | Msa1379970 | 0.805977 | 1.028704e-49 | -8.615850e-47 |
| Msa0333700 | Msa1379970 | 0.806231 | 9.093311e-50 | -8.615850e-47 |
| Msa0343660 | Msa1379970 | 0.818234 | 2.180534e-52 | -8.615850e-47 |
| Msa0359250 | Msa1379970 | 0.892436 | 1.590739e-74 | -8.615850e-47 |
| Msa1127140 | Msa1379970 | 0.829939 | 3.887415e-55 | -8.615850e-47 |
| Msa1129960 | Msa1379970 | 0.821983 | 3.019948e-53 | -8.615850e-47 |
| Msa1129970 | Msa1379970 | 0.823352 | 1.450711e-53 | -8.615850e-47 |
| Msa1130010 | Msa1379970 | 0.809727 | 1.640306e-50 | -8.615850e-47 |
| Msa1135380 | Msa1379970 | 0.815568 | 8.647142e-52 | -8.615850e-47 |
| Msa1140640 | Msa1379970 | 0.807037 | 6.146274e-50 | -8.615850e-47 |
| Msa1145020 | Msa1379970 | 0.843877 | 1.068982e-58 | -8.615850e-47 |
| Msa1166400 | Msa1379970 | 0.810057 | 1.392923e-50 | -8.615850e-47 |
| Msa1176160 | Msa1379970 | 0.846343 | 2.304739e-59 | -8.615850e-47 |
| Msa1179280 | Msa1379970 | 0.800922 | 1.148182e-48 | -8.615850e-47 |
| Msa1200440 | Msa1379970 | 0.809593 | 1.752894e-50 | -8.615850e-47 |
| Msa1201110 | Msa1379970 | 0.839405 | 1.616225e-57 | -8.615850e-47 |
| Msa1201160 | Msa1379970 | 0.866519 | 2.686904e-65 | -8.615850e-47 |
| Msa0487570 | Msa1379970 | 0.815748 | 7.885139e-52 | -8.615850e-47 |
| Msa0487630 | Msa1379970 | 0.813454 | 2.539457e-51 | -8.615850e-47 |
| Msa0492190 | Msa1379970 | 0.878505 | 2.660397e-69 | -8.615850e-47 |
| Msa0515950 | Msa1379970 | 0.825322 | 4.994208e-54 | -8.615850e-47 |
| Msa0534930 | Msa1379970 | 0.836461 | 9.232790e-57 | -8.615850e-47 |
| Msa0535040 | Msa1379970 | 0.831851 | 1.320194e-55 | -8.615850e-47 |
| Msa0537920 | Msa1379970 | 0.809304 | 2.021461e-50 | -8.615850e-47 |
| Msa0575740 | Msa1379970 | 0.839286 | 1.735207e-57 | -8.615850e-47 |
| Msa0591790 | Msa1379970 | 0.852553 | 4.280167e-61 | -8.615850e-47 |
| Msa0594090 | Msa1379970 | 0.846705 | 1.835885e-59 | -8.615850e-47 |
| Msa0849280 | Msa1379970 | 0.824424 | 8.132330e-54 | -8.615850e-47 |
| Msa0851020 | Msa1379970 | 0.822708 | 2.050454e-53 | -8.615850e-47 |
| Msa0860280 | Msa1379970 | 0.884137 | 2.477858e-71 | -8.615850e-47 |
| Msa0867350 | Msa1379970 | 0.837752 | 4.317305e-57 | -8.615850e-47 |
| Msa0898730 | Msa1379970 | 0.843707 | 1.187750e-58 | -8.615850e-47 |
| Msa0922750 | Msa1379970 | 0.805035 | 1.620973e-49 | -8.615850e-47 |
| Msa0929870 | Msa1379970 | 0.855434 | 6.325157e-62 | -8.615850e-47 |
| Msa0936410 | Msa1379970 | 0.808642 | 2.801921e-50 | -8.615850e-47 |
| Msa0944760 | Msa1379970 | 0.846584 | 1.981100e-59 | -8.615850e-47 |
| Msa0944880 | Msa1379970 | 0.830215 | 3.329510e-55 | -8.615850e-47 |
| Msa0961560 | Msa1379970 | 0.832084 | 1.156519e-55 | -8.615850e-47 |
| Msa0965310 | Msa1379970 | 0.810857 | 9.354789e-51 | -8.615850e-47 |
| Msa0973250 | Msa1379970 | 0.806657 | 7.397207e-50 | -8.615850e-47 |
| Msa0979510 | Msa1379970 | 0.849936 | 2.348274e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 17 sgRNAs with CRISPR-Local
Find 26 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCCTTTGGTACGGTAAAA+TGG | 0.241786 | tig0020315:+124827 | Msa1379970:CDS |
| CAATGGTTGTGGGGTTCCTT+TGG | 0.325217 | tig0020315:+124814 | None:intergenic |
| AGGGCAAAAGCATAAAATAT+TGG | 0.368692 | tig0020315:-125139 | None:intergenic |
| GTCCATCTTCTGCTGTATCT+CGG | 0.388400 | tig0020315:+125045 | Msa1379970:CDS |
| TCCATCTTCTGCTGTATCTC+GGG | 0.445994 | tig0020315:+125046 | Msa1379970:CDS |
| TATTAATTAACAATGGTTGT+GGG | 0.467711 | tig0020315:+124804 | None:intergenic |
| GTATTAATTAACAATGGTTG+TGG | 0.474200 | tig0020315:+124803 | None:intergenic |
| ACGGTAAAATGGATTCCAAC+AGG | 0.494468 | tig0020315:+124838 | Msa1379970:CDS |
| GGAGACATCGATTCAAGTCT+AGG | 0.508656 | tig0020315:-125097 | None:intergenic |
| GCCCGAGATACAGCAGAAGA+TGG | 0.518961 | tig0020315:-125047 | None:intergenic |
| GTTGTGGGGTTCCTTTGGTA+CGG | 0.531669 | tig0020315:+124819 | Msa1379970:CDS |
| ATTAATTAACAATGGTTGTG+GGG | 0.582885 | tig0020315:+124805 | None:intergenic |
| TAAAATATTGGAAACTGCAG+TGG | 0.596637 | tig0020315:-125127 | None:intergenic |
| AAGTATGCAAGATCATGAGC+AGG | 0.597944 | tig0020315:+125018 | Msa1379970:intron |
| TGGAAACTGCAGTGGTGCTG+TGG | 0.605136 | tig0020315:-125119 | None:intergenic |
| GGAAACTGCAGTGGTGCTGT+GGG | 0.653534 | tig0020315:-125118 | None:intergenic |
| GTTGCAGCTGAGAAAAGACG+AGG | 0.732163 | tig0020315:-125069 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAAATTACAAAATTAAT+CGG | - | tig0020315:125233-125252 | None:intergenic | 10.0% |
| !!! | ATAGTTTTCCATTTAGAGTT+AGG | + | tig0020315:124878-124897 | Msa1379970:intron | 25.0% |
| !! | TACGAATTTGCATTTTACAA+GGG | - | tig0020315:125161-125180 | None:intergenic | 25.0% |
| !! | ATACGAATTTGCATTTTACA+AGG | - | tig0020315:125162-125181 | None:intergenic | 25.0% |
| ! | TTCCATTTAGAGTTAGGTTA+AGG | + | tig0020315:124884-124903 | Msa1379970:intron | 30.0% |
| TACCTTAACCTAACTCTAAA+TGG | - | tig0020315:124889-124908 | None:intergenic | 30.0% | |
| TTCCAATTAGAGTTAGGTTA+AGG | + | tig0020315:124936-124955 | Msa1379970:intron | 30.0% | |
| AACCTTAACCTAACTCTAAT+TGG | - | tig0020315:124941-124960 | None:intergenic | 30.0% | |
| TAAAATATTGGAAACTGCAG+TGG | - | tig0020315:125130-125149 | None:intergenic | 30.0% | |
| ! | AGGGCAAAAGCATAAAATAT+TGG | - | tig0020315:125142-125161 | None:intergenic | 30.0% |
| ! | AATCCATTTTACCGTACCAA+AGG | - | tig0020315:124833-124852 | None:intergenic | 35.0% |
| AACTCTAATTGGAAGATCGA+GGG | - | tig0020315:124930-124949 | None:intergenic | 35.0% | |
| TAACTCTAATTGGAAGATCG+AGG | - | tig0020315:124931-124950 | None:intergenic | 35.0% | |
| TCGATCTTCCAATTAGAGTT+AGG | + | tig0020315:124930-124949 | Msa1379970:intron | 35.0% | |
| GTTCCTTTGGTACGGTAAAA+TGG | + | tig0020315:124827-124846 | Msa1379970:CDS | 40.0% | |
| ! | ACGGTAAAATGGATTCCAAC+AGG | + | tig0020315:124838-124857 | Msa1379970:CDS | 40.0% |
| AAGTATGCAAGATCATGAGC+AGG | + | tig0020315:125018-125037 | Msa1379970:intron | 40.0% | |
| AGTATCATGTGCGAACCTGT+TGG | - | tig0020315:124856-124875 | None:intergenic | 45.0% | |
| GTCCATCTTCTGCTGTATCT+CGG | + | tig0020315:125045-125064 | Msa1379970:CDS | 45.0% | |
| TCCATCTTCTGCTGTATCTC+GGG | + | tig0020315:125046-125065 | Msa1379970:CDS | 45.0% | |
| !! | GGAGACATCGATTCAAGTCT+AGG | - | tig0020315:125100-125119 | None:intergenic | 45.0% |
| GTTGTGGGGTTCCTTTGGTA+CGG | + | tig0020315:124819-124838 | Msa1379970:CDS | 50.0% | |
| GTTGCAGCTGAGAAAAGACG+AGG | - | tig0020315:125072-125091 | None:intergenic | 50.0% | |
| GCCCGAGATACAGCAGAAGA+TGG | - | tig0020315:125050-125069 | None:intergenic | 55.0% | |
| !! | GGAAACTGCAGTGGTGCTGT+GGG | - | tig0020315:125121-125140 | None:intergenic | 55.0% |
| ! | TGGAAACTGCAGTGGTGCTG+TGG | - | tig0020315:125122-125141 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020315 | gene | 124816 | 125265 | 124816 | ID=Msa1379970;Name=Msa1379970 |
| tig0020315 | mRNA | 124816 | 125265 | 124816 | ID=Msa1379970-mRNA-1;Parent=Msa1379970;Name=Msa1379970-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|0.25|1|1|4|0|65 |
| tig0020315 | exon | 124816 | 124859 | 124816 | ID=Msa1379970-mRNA-1:exon:6846;Parent=Msa1379970-mRNA-1 |
| tig0020315 | exon | 124900 | 124905 | 124900 | ID=Msa1379970-mRNA-1:exon:6847;Parent=Msa1379970-mRNA-1 |
| tig0020315 | exon | 125021 | 125162 | 125021 | ID=Msa1379970-mRNA-1:exon:6848;Parent=Msa1379970-mRNA-1 |
| tig0020315 | exon | 125260 | 125265 | 125260 | ID=Msa1379970-mRNA-1:exon:6849;Parent=Msa1379970-mRNA-1 |
| tig0020315 | CDS | 124816 | 124859 | 124816 | ID=Msa1379970-mRNA-1:cds;Parent=Msa1379970-mRNA-1 |
| tig0020315 | CDS | 124900 | 124905 | 124900 | ID=Msa1379970-mRNA-1:cds;Parent=Msa1379970-mRNA-1 |
| tig0020315 | CDS | 125021 | 125162 | 125021 | ID=Msa1379970-mRNA-1:cds;Parent=Msa1379970-mRNA-1 |
| tig0020315 | CDS | 125260 | 125265 | 125260 | ID=Msa1379970-mRNA-1:cds;Parent=Msa1379970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
