Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492190 | RHN66888.1 | 90.647 | 278 | 19 | 3 | 1 | 277 | 59 | 330 | 2.66e-128 | 377 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492190 | sp|Q9S728|PDF1_ARATH | 57.627 | 177 | 52 | 5 | 118 | 276 | 134 | 305 | 2.03e-56 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492190 | A0A396IQA7 | 90.647 | 278 | 19 | 3 | 1 | 277 | 59 | 330 | 1.27e-128 | 377 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004390 | Msa0492190 | 0.800085 | 1.700639e-48 | -8.615850e-47 |
| Msa0006980 | Msa0492190 | 0.863946 | 1.730622e-64 | -8.615850e-47 |
| Msa0015710 | Msa0492190 | 0.847799 | 9.203278e-60 | -8.615850e-47 |
| Msa0016120 | Msa0492190 | 0.828793 | 7.379266e-55 | -8.615850e-47 |
| Msa0019600 | Msa0492190 | 0.897684 | 1.106833e-76 | -8.615850e-47 |
| Msa0050040 | Msa0492190 | 0.828247 | 9.994103e-55 | -8.615850e-47 |
| Msa0055450 | Msa0492190 | 0.823367 | 1.438859e-53 | -8.615850e-47 |
| Msa0066320 | Msa0492190 | 0.834246 | 3.348609e-56 | -8.615850e-47 |
| Msa0074650 | Msa0492190 | 0.800675 | 1.289506e-48 | -8.615850e-47 |
| Msa0074800 | Msa0492190 | 0.808090 | 3.674522e-50 | -8.615850e-47 |
| Msa0080990 | Msa0492190 | 0.823018 | 1.736044e-53 | -8.615850e-47 |
| Msa0102990 | Msa0492190 | 0.827471 | 1.536608e-54 | -8.615850e-47 |
| Msa0104500 | Msa0492190 | 0.811397 | 7.145964e-51 | -8.615850e-47 |
| Msa0109880 | Msa0492190 | 0.853843 | 1.828001e-61 | -8.615850e-47 |
| Msa0111750 | Msa0492190 | 0.888722 | 4.589977e-73 | -8.615850e-47 |
| Msa0124130 | Msa0492190 | 0.877752 | 4.882029e-69 | -8.615850e-47 |
| Msa0141120 | Msa0492190 | 0.855494 | 6.075145e-62 | -8.615850e-47 |
| Msa0147600 | Msa0492190 | 0.816014 | 6.877219e-52 | -8.615850e-47 |
| Msa0149140 | Msa0492190 | 0.885813 | 5.882535e-72 | -8.615850e-47 |
| Msa0152480 | Msa0492190 | 0.813810 | 2.119399e-51 | -8.615850e-47 |
| Msa0152500 | Msa0492190 | 0.835840 | 1.327546e-56 | -8.615850e-47 |
| Msa0156250 | Msa0492190 | 0.874761 | 5.244160e-68 | -8.615850e-47 |
| Msa0185490 | Msa0492190 | 0.858839 | 6.252702e-63 | -8.615850e-47 |
| Msa0194380 | Msa0492190 | 0.813213 | 2.868620e-51 | -8.615850e-47 |
| Msa0197100 | Msa0492190 | 0.840291 | 9.498164e-58 | -8.615850e-47 |
| Msa0203030 | Msa0492190 | 0.833299 | 5.775226e-56 | -8.615850e-47 |
| Msa0212080 | Msa0492190 | 0.842881 | 1.972494e-58 | -8.615850e-47 |
| Msa0212150 | Msa0492190 | 0.885524 | 7.551697e-72 | -8.615850e-47 |
| Msa0215640 | Msa0492190 | 0.839778 | 1.292385e-57 | -8.615850e-47 |
| Msa0217230 | Msa0492190 | 0.829491 | 4.995896e-55 | -8.615850e-47 |
| Msa0219190 | Msa0492190 | 0.837006 | 6.705328e-57 | -8.615850e-47 |
| Msa0221290 | Msa0492190 | 0.817250 | 3.635584e-52 | -8.615850e-47 |
| Msa0373960 | Msa0492190 | 0.847023 | 1.503012e-59 | -8.615850e-47 |
| Msa0375680 | Msa0492190 | 0.827333 | 1.657845e-54 | -8.615850e-47 |
| Msa0375700 | Msa0492190 | 0.815166 | 1.062638e-51 | -8.615850e-47 |
| Msa0375890 | Msa0492190 | 0.809755 | 1.617670e-50 | -8.615850e-47 |
| Msa0375910 | Msa0492190 | 0.805893 | 1.071540e-49 | -8.615850e-47 |
| Msa0384910 | Msa0492190 | 0.800993 | 1.110182e-48 | -8.615850e-47 |
| Msa0392420 | Msa0492190 | 0.842435 | 2.590777e-58 | -8.615850e-47 |
| Msa0392460 | Msa0492190 | 0.837336 | 5.518964e-57 | -8.615850e-47 |
| Msa0392490 | Msa0492190 | 0.832828 | 7.565275e-56 | -8.615850e-47 |
| Msa0406000 | Msa0492190 | 0.982771 | 5.865340e-156 | -8.615850e-47 |
| Msa0423100 | Msa0492190 | 0.820766 | 5.765921e-53 | -8.615850e-47 |
| Msa0424330 | Msa0492190 | 0.881493 | 2.292728e-70 | -8.615850e-47 |
| Msa0424340 | Msa0492190 | 0.896430 | 3.717686e-76 | -8.615850e-47 |
| Msa0424350 | Msa0492190 | 0.890630 | 8.277690e-74 | -8.615850e-47 |
| Msa0441590 | Msa0492190 | 0.832232 | 1.063104e-55 | -8.615850e-47 |
| Msa0451400 | Msa0492190 | 0.951500 | 1.791708e-109 | -8.615850e-47 |
| Msa0469260 | Msa0492190 | 0.813717 | 2.222116e-51 | -8.615850e-47 |
| Msa0471240 | Msa0492190 | 0.821965 | 3.049965e-53 | -8.615850e-47 |
| Msa0479540 | Msa0492190 | 0.803019 | 4.256372e-49 | -8.615850e-47 |
| Msa0239030 | Msa0492190 | 0.851566 | 8.167246e-61 | -8.615850e-47 |
| Msa0252630 | Msa0492190 | 0.857518 | 1.545556e-62 | -8.615850e-47 |
| Msa0252770 | Msa0492190 | 0.883072 | 6.113569e-71 | -8.615850e-47 |
| Msa0265420 | Msa0492190 | 0.801061 | 1.075506e-48 | -8.615850e-47 |
| Msa0276740 | Msa0492190 | 0.838388 | 2.962585e-57 | -8.615850e-47 |
| Msa0289920 | Msa0492190 | 0.880513 | 5.160328e-70 | -8.615850e-47 |
| Msa0291330 | Msa0492190 | 0.837486 | 5.053253e-57 | -8.615850e-47 |
| Msa0298240 | Msa0492190 | 0.842428 | 2.601158e-58 | -8.615850e-47 |
| Msa0306120 | Msa0492190 | 0.895440 | 9.569842e-76 | -8.615850e-47 |
| Msa0316680 | Msa0492190 | 0.844582 | 6.914496e-59 | -8.615850e-47 |
| Msa0322830 | Msa0492190 | 0.812143 | 4.917378e-51 | -8.615850e-47 |
| Msa0322840 | Msa0492190 | 0.833754 | 4.448139e-56 | -8.615850e-47 |
| Msa0322860 | Msa0492190 | 0.841122 | 5.752887e-58 | -8.615850e-47 |
| Msa0329620 | Msa0492190 | 0.896247 | 4.430856e-76 | -8.615850e-47 |
| Msa0333450 | Msa0492190 | 0.825152 | 5.476299e-54 | -8.615850e-47 |
| Msa0333700 | Msa0492190 | 0.840999 | 6.196696e-58 | -8.615850e-47 |
| Msa0334700 | Msa0492190 | 0.802137 | 6.469828e-49 | -8.615850e-47 |
| Msa0340480 | Msa0492190 | 0.839241 | 1.782314e-57 | -8.615850e-47 |
| Msa0343660 | Msa0492190 | 0.862556 | 4.660208e-64 | -8.615850e-47 |
| Msa0344570 | Msa0492190 | 0.823786 | 1.148387e-53 | -8.615850e-47 |
| Msa0351770 | Msa0492190 | 0.848060 | 7.795103e-60 | -8.615850e-47 |
| Msa0359250 | Msa0492190 | 0.951398 | 2.220704e-109 | -8.615850e-47 |
| Msa0487570 | Msa0492190 | 0.846692 | 1.851459e-59 | -8.615850e-47 |
| Msa0487630 | Msa0492190 | 0.836673 | 8.154554e-57 | -8.615850e-47 |
| Msa0492190 | Msa0515950 | 0.886058 | 4.756046e-72 | -8.615850e-47 |
| Msa0492190 | Msa0533080 | 0.805044 | 1.614431e-49 | -8.615850e-47 |
| Msa0492190 | Msa0534930 | 0.891750 | 2.985449e-74 | -8.615850e-47 |
| Msa0492190 | Msa0535040 | 0.873747 | 1.157391e-67 | -8.615850e-47 |
| Msa0492190 | Msa0537920 | 0.838117 | 3.479449e-57 | -8.615850e-47 |
| Msa0492190 | Msa0538220 | 0.828279 | 9.818139e-55 | -8.615850e-47 |
| Msa0492190 | Msa0575740 | 0.859707 | 3.433996e-63 | -8.615850e-47 |
| Msa0492190 | Msa0591790 | 0.898271 | 6.249292e-77 | -8.615850e-47 |
| Msa0492190 | Msa0591800 | 0.822024 | 2.955659e-53 | -8.615850e-47 |
| Msa0492190 | Msa0594090 | 0.896915 | 2.332090e-76 | -8.615850e-47 |
| Msa0492190 | Msa0641250 | 0.855509 | 6.016434e-62 | -8.615850e-47 |
| Msa0492190 | Msa0641360 | 0.807576 | 4.724368e-50 | -8.615850e-47 |
| Msa0492190 | Msa0669840 | 0.920398 | 1.345332e-87 | -8.615850e-47 |
| Msa0492190 | Msa0680150 | 0.815400 | 9.426738e-52 | -8.615850e-47 |
| Msa0492190 | Msa0688500 | 0.823387 | 1.423442e-53 | -8.615850e-47 |
| Msa0492190 | Msa0707220 | 0.842296 | 2.820245e-58 | -8.615850e-47 |
| Msa0492190 | Msa0709450 | 0.834920 | 2.267021e-56 | -8.615850e-47 |
| Msa0492190 | Msa0711320 | 0.822859 | 1.890388e-53 | -8.615850e-47 |
| Msa0492190 | Msa0720040 | 0.800512 | 1.391985e-48 | -8.615850e-47 |
| Msa0492190 | Msa0725860 | 0.841648 | 4.182004e-58 | -8.615850e-47 |
| Msa0492190 | Msa0737190 | 0.803205 | 3.895159e-49 | -8.615850e-47 |
| Msa0492190 | Msa0739580 | 0.912735 | 1.384650e-83 | -8.615850e-47 |
| Msa0492190 | Msa0742180 | 0.808320 | 3.281732e-50 | -8.615850e-47 |
| Msa0492190 | Msa0748000 | 0.821766 | 3.390961e-53 | -8.615850e-47 |
| Msa0492190 | Msa0748400 | 0.814001 | 1.924010e-51 | -8.615850e-47 |
| Msa0492190 | Msa0751890 | 0.824607 | 7.365973e-54 | -8.615850e-47 |
| Msa0492190 | Msa0752840 | 0.846755 | 1.779092e-59 | -8.615850e-47 |
| Msa0492190 | Msa0764820 | 0.844502 | 7.267255e-59 | -8.615850e-47 |
| Msa0492190 | Msa0770290 | 0.852076 | 5.850853e-61 | -8.615850e-47 |
| Msa0492190 | Msa0782360 | 0.882252 | 1.217875e-70 | -8.615850e-47 |
| Msa0492190 | Msa0819890 | 0.849763 | 2.624942e-60 | -8.615850e-47 |
| Msa0492190 | Msa0819900 | 0.814912 | 1.210069e-51 | -8.615850e-47 |
| Msa0492190 | Msa0823400 | 0.851527 | 8.372416e-61 | -8.615850e-47 |
| Msa0492190 | Msa0828830 | 0.857335 | 1.750516e-62 | -8.615850e-47 |
| Msa0492190 | Msa0831940 | 0.846682 | 1.863087e-59 | -8.615850e-47 |
| Msa0492190 | Msa0840500 | 0.816343 | 5.807599e-52 | -8.615850e-47 |
| Msa0492190 | Msa0844560 | 0.826463 | 2.676364e-54 | -8.615850e-47 |
| Msa0492190 | Msa0849280 | 0.862402 | 5.199917e-64 | -8.615850e-47 |
| Msa0492190 | Msa0851020 | 0.867952 | 9.363954e-66 | -8.615850e-47 |
| Msa0492190 | Msa0860160 | 0.823275 | 1.511785e-53 | -8.615850e-47 |
| Msa0492190 | Msa0860170 | 0.816353 | 5.776253e-52 | -8.615850e-47 |
| Msa0492190 | Msa0860280 | 0.901319 | 3.023103e-78 | -8.615850e-47 |
| Msa0492190 | Msa0867350 | 0.887013 | 2.070862e-72 | -8.615850e-47 |
| Msa0492190 | Msa0896350 | 0.815268 | 1.008373e-51 | -8.615850e-47 |
| Msa0492190 | Msa0898730 | 0.893857 | 4.251247e-75 | -8.615850e-47 |
| Msa0492190 | Msa0899950 | 0.820395 | 7.018417e-53 | -8.615850e-47 |
| Msa0492190 | Msa0911540 | 0.828109 | 1.079268e-54 | -8.615850e-47 |
| Msa0492190 | Msa0916640 | 0.838882 | 2.207588e-57 | -8.615850e-47 |
| Msa0492190 | Msa0922750 | 0.843349 | 1.479566e-58 | -8.615850e-47 |
| Msa0492190 | Msa0927120 | 0.821597 | 3.709480e-53 | -8.615850e-47 |
| Msa0492190 | Msa0929870 | 0.896155 | 4.837107e-76 | -8.615850e-47 |
| Msa0492190 | Msa0936410 | 0.829989 | 3.779125e-55 | -8.615850e-47 |
| Msa0492190 | Msa0941820 | 0.835078 | 2.068790e-56 | -8.615850e-47 |
| Msa0492190 | Msa0941960 | 0.802396 | 5.721903e-49 | -8.615850e-47 |
| Msa0492190 | Msa0944760 | 0.857477 | 1.589090e-62 | -8.615850e-47 |
| Msa0492190 | Msa0944880 | 0.833855 | 4.195105e-56 | -8.615850e-47 |
| Msa0492190 | Msa0946210 | 0.806001 | 1.016784e-49 | -8.615850e-47 |
| Msa0492190 | Msa0953540 | 0.843333 | 1.494156e-58 | -8.615850e-47 |
| Msa0492190 | Msa0961560 | 0.873168 | 1.811927e-67 | -8.615850e-47 |
| Msa0492190 | Msa0964840 | 0.816398 | 5.644159e-52 | -8.615850e-47 |
| Msa0492190 | Msa0965310 | 0.833265 | 5.888852e-56 | -8.615850e-47 |
| Msa0492190 | Msa0973250 | 0.815229 | 1.028962e-51 | -8.615850e-47 |
| Msa0492190 | Msa0979030 | 0.802581 | 5.241863e-49 | -8.615850e-47 |
| Msa0492190 | Msa0979510 | 0.823718 | 1.190841e-53 | -8.615850e-47 |
| Msa0492190 | Msa0996270 | 0.861413 | 1.044420e-63 | -8.615850e-47 |
| Msa0492190 | Msa0999300 | 0.898258 | 6.324929e-77 | -8.615850e-47 |
| Msa0492190 | Msa0999320 | 0.826828 | 2.189269e-54 | -8.615850e-47 |
| Msa0492190 | Msa0999340 | 0.809644 | 1.709253e-50 | -8.615850e-47 |
| Msa0492190 | Msa0999350 | 0.831204 | 1.906103e-55 | -8.615850e-47 |
| Msa0492190 | Msa0999360 | 0.833907 | 4.072807e-56 | -8.615850e-47 |
| Msa0492190 | Msa0999390 | 0.813333 | 2.698765e-51 | -8.615850e-47 |
| Msa0492190 | Msa0999400 | 0.830864 | 2.310129e-55 | -8.615850e-47 |
| Msa0492190 | Msa0999410 | 0.845911 | 3.021503e-59 | -8.615850e-47 |
| Msa0492190 | Msa0999700 | 0.817720 | 2.848028e-52 | -8.615850e-47 |
| Msa0492190 | Msa1001870 | 0.827808 | 1.275233e-54 | -8.615850e-47 |
| Msa0492190 | Msa1001890 | 0.859083 | 5.286560e-63 | -8.615850e-47 |
| Msa0492190 | Msa1005360 | 0.808164 | 3.542662e-50 | -8.615850e-47 |
| Msa0492190 | Msa1037770 | 0.835036 | 2.120193e-56 | -8.615850e-47 |
| Msa0492190 | Msa1037890 | 0.869658 | 2.624562e-66 | -8.615850e-47 |
| Msa0492190 | Msa1037900 | 0.881072 | 3.252512e-70 | -8.615850e-47 |
| Msa0492190 | Msa1037910 | 0.859228 | 4.781696e-63 | -8.615850e-47 |
| Msa0492190 | Msa1041530 | 0.823512 | 1.330946e-53 | -8.615850e-47 |
| Msa0492190 | Msa1042670 | 0.801666 | 8.083444e-49 | -8.615850e-47 |
| Msa0492190 | Msa1047990 | 0.822187 | 2.709035e-53 | -8.615850e-47 |
| Msa0492190 | Msa1060580 | 0.811642 | 6.321905e-51 | -8.615850e-47 |
| Msa0492190 | Msa1081570 | 0.843004 | 1.829444e-58 | -8.615850e-47 |
| Msa0492190 | Msa1084520 | 0.861090 | 1.309548e-63 | -8.615850e-47 |
| Msa0492190 | Msa1092020 | 0.838637 | 2.555652e-57 | -8.615850e-47 |
| Msa0492190 | Msa1096210 | 0.805327 | 1.408066e-49 | -8.615850e-47 |
| Msa0492190 | Msa1123880 | 0.824683 | 7.068423e-54 | -8.615850e-47 |
| Msa0492190 | Msa1125810 | 0.836110 | 1.133538e-56 | -8.615850e-47 |
| Msa0492190 | Msa1127140 | 0.844077 | 9.449445e-59 | -8.615850e-47 |
| Msa0492190 | Msa1129950 | 0.839651 | 1.395280e-57 | -8.615850e-47 |
| Msa0492190 | Msa1129960 | 0.863529 | 2.332975e-64 | -8.615850e-47 |
| Msa0492190 | Msa1129970 | 0.857278 | 1.819732e-62 | -8.615850e-47 |
| Msa0492190 | Msa1130010 | 0.878316 | 3.098321e-69 | -8.615850e-47 |
| Msa0492190 | Msa1134660 | 0.800258 | 1.567768e-48 | -8.615850e-47 |
| Msa0492190 | Msa1135380 | 0.853415 | 2.425968e-61 | -8.615850e-47 |
| Msa0492190 | Msa1145020 | 0.860315 | 2.250474e-63 | -8.615850e-47 |
| Msa0492190 | Msa1166400 | 0.834689 | 2.592667e-56 | -8.615850e-47 |
| Msa0492190 | Msa1169990 | 0.825011 | 5.914476e-54 | -8.615850e-47 |
| Msa0492190 | Msa1171310 | 0.843182 | 1.640234e-58 | -8.615850e-47 |
| Msa0492190 | Msa1176160 | 0.818620 | 1.782632e-52 | -8.615850e-47 |
| Msa0492190 | Msa1176580 | 0.803142 | 4.014946e-49 | -8.615850e-47 |
| Msa0492190 | Msa1179280 | 0.815055 | 1.124420e-51 | -8.615850e-47 |
| Msa0492190 | Msa1200440 | 0.806694 | 7.262111e-50 | -8.615850e-47 |
| Msa0492190 | Msa1201110 | 0.877443 | 6.260904e-69 | -8.615850e-47 |
| Msa0492190 | Msa1201160 | 0.897524 | 1.293374e-76 | -8.615850e-47 |
| Msa0492190 | Msa1228190 | 0.892731 | 1.210603e-74 | -8.615850e-47 |
| Msa0492190 | Msa1233560 | 0.837288 | 5.678829e-57 | -8.615850e-47 |
| Msa0492190 | Msa1271260 | 0.860946 | 1.448270e-63 | -8.615850e-47 |
| Msa0492190 | Msa1275820 | 0.802409 | 5.688675e-49 | -8.615850e-47 |
| Msa0492190 | Msa1277400 | 0.802810 | 4.701457e-49 | -8.615850e-47 |
| Msa0492190 | Msa1294290 | 0.883553 | 4.071415e-71 | -8.615850e-47 |
| Msa0492190 | Msa1305310 | 0.806525 | 7.883668e-50 | -8.615850e-47 |
| Msa0492190 | Msa1305510 | 0.899825 | 1.349381e-77 | -8.615850e-47 |
| Msa0492190 | Msa1307190 | 0.813801 | 2.129104e-51 | -8.615850e-47 |
| Msa0492190 | Msa1313970 | 0.819417 | 1.174402e-52 | -8.615850e-47 |
| Msa0492190 | Msa1316540 | 0.827539 | 1.479447e-54 | -8.615850e-47 |
| Msa0492190 | Msa1326630 | 0.835881 | 1.296350e-56 | -8.615850e-47 |
| Msa0492190 | Msa1336620 | 0.804743 | 1.866166e-49 | -8.615850e-47 |
| Msa0492190 | Msa1336780 | 0.821055 | 4.947722e-53 | -8.615850e-47 |
| Msa0492190 | Msa1348400 | 0.801945 | 7.085785e-49 | -8.615850e-47 |
| Msa0492190 | Msa1356740 | 0.819924 | 8.995251e-53 | -8.615850e-47 |
| Msa0492190 | Msa1356990 | 0.807051 | 6.104575e-50 | -8.615850e-47 |
| Msa0492190 | Msa1374550 | 0.813002 | 3.190494e-51 | -8.615850e-47 |
| Msa0492190 | Msa1378770 | 0.804317 | 2.289580e-49 | -8.615850e-47 |
| Msa0492190 | Msa1378870 | 0.836847 | 7.362348e-57 | -8.615850e-47 |
| Msa0492190 | Msa1379970 | 0.878505 | 2.660397e-69 | -8.615850e-47 |
| Msa0492190 | Msa1388770 | 0.801963 | 7.026344e-49 | -8.615850e-47 |
| Msa0492190 | Msa1389050 | 0.831819 | 1.344428e-55 | -8.615850e-47 |
| Msa0492190 | Msa1394890 | 0.856575 | 2.932303e-62 | -8.615850e-47 |
| Msa0492190 | Msa1406780 | 0.912969 | 1.058618e-83 | -8.615850e-47 |
| Msa0492190 | Msa1414930 | 0.813415 | 2.589573e-51 | -8.615850e-47 |
| Msa0492190 | Msa1420060 | 0.849065 | 4.107499e-60 | -8.615850e-47 |
| Msa0492190 | Msa1421550 | 0.901649 | 2.163811e-78 | -8.615850e-47 |
| Msa0492190 | Msa1423460 | 0.861513 | 9.730536e-64 | -8.615850e-47 |
| Msa0492190 | Msa1431850 | 0.917571 | 4.512947e-86 | -8.615850e-47 |
| Msa0492190 | Msa1435480 | 0.843418 | 1.418862e-58 | -8.615850e-47 |
| Msa0492190 | Msa1437710 | 0.809599 | 1.747116e-50 | -8.615850e-47 |
| Msa0492190 | Msa1449940 | 0.847288 | 1.271133e-59 | -8.615850e-47 |
| Msa0492190 | Msa1455320 | 0.847413 | 1.174773e-59 | -8.615850e-47 |
| Msa0492190 | Msa1458910 | 0.809815 | 1.570219e-50 | -8.615850e-47 |
| Msa0492190 | Msa1459530 | 0.841175 | 5.570802e-58 | -8.615850e-47 |
| Msa0492190 | Msa1461060 | 0.875285 | 3.476171e-68 | -8.615850e-47 |
| Msa0492190 | Msa1462530 | 0.841785 | 3.848712e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492190 | MtrunA17_Chr3g0096661 | 90.647 | 278 | 19 | 3 | 1 | 277 | 59 | 330 | 2.45e-132 | 377 |
| Msa0492190 | MtrunA17_Chr5g0443411 | 58.582 | 268 | 84 | 7 | 27 | 276 | 326 | 584 | 2.59e-70 | 227 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492190 | AT2G42840.1 | 57.627 | 177 | 52 | 5 | 118 | 276 | 134 | 305 | 2.07e-57 | 186 |
Find 118 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAATTAATGAAAGCTTTA+TGG | 0.095824 | 3_4:+15502804 | Msa0492190:three_prime_UTR |
| TCTAGGTTGGTGGGGAAATA+TGG | 0.109920 | 3_4:+15502351 | Msa0492190:CDS |
| CTTACACAACTGACCAAGTT+AGG | 0.249344 | 3_4:+15502524 | Msa0492190:CDS |
| ATGAATTAGTTTGTTTGATT+TGG | 0.309369 | 3_4:+15502669 | Msa0492190:three_prime_UTR |
| GGACTCATCCAGGAATAATA+TGG | 0.312895 | 3_4:+15502323 | Msa0492190:CDS |
| GCAACTTACTTGCAAGTTCC+AGG | 0.317360 | 3_4:-15501438 | None:intergenic |
| TTATTAAGAACATTATATTA+AGG | 0.317983 | 3_4:+15502701 | Msa0492190:three_prime_UTR |
| CATGACTATGATCAATTTCA+TGG | 0.347778 | 3_4:-15502640 | None:intergenic |
| AGAATTCCCCATATTATTCC+TGG | 0.352015 | 3_4:-15502331 | None:intergenic |
| TGCTTCATTCCTTAACTCCT+TGG | 0.367728 | 3_4:+15502486 | Msa0492190:CDS |
| CCACTTGATGGAGGGTTTGA+TGG | 0.369108 | 3_4:-15501279 | None:intergenic |
| GGAATAATATGGGGAATTCT+AGG | 0.377925 | 3_4:+15502334 | Msa0492190:CDS |
| CCTTCCCCATCTCCCTTCCC+TGG | 0.386576 | 3_4:+15501420 | Msa0492190:CDS |
| TCAACAGTGGTGGAGATTAC+AGG | 0.395030 | 3_4:-15500878 | None:intergenic |
| GAAGAAGAGAAGTGAGGGAG+GGG | 0.397433 | 3_4:-15500746 | None:intergenic |
| ACTGTTGAAGTTCCACATTC+AGG | 0.402073 | 3_4:+15500893 | Msa0492190:CDS |
| TGTGGTTCACCAAGGAGTTA+AGG | 0.411983 | 3_4:-15502495 | None:intergenic |
| TTGTGTTGCAGCAGCCTTGT+TGG | 0.413820 | 3_4:-15502572 | None:intergenic |
| CTAGGTTGGTGGGGAAATAT+GGG | 0.416346 | 3_4:+15502352 | Msa0492190:CDS |
| CCAGGATCTATTGGTGTTGA+TGG | 0.420551 | 3_4:-15501366 | None:intergenic |
| TTCTTACCAGCAAGAAAAGA+TGG | 0.422683 | 3_4:+15500781 | Msa0492190:exon |
| CTTCATTTGCCATCTTGAAA+AGG | 0.430225 | 3_4:-15502600 | None:intergenic |
| CTAACTTGGTCAGTTGTGTA+AGG | 0.430724 | 3_4:-15502523 | None:intergenic |
| TTTGGTGTGACTAACATTCC+AGG | 0.432170 | 3_4:+15502382 | Msa0492190:CDS |
| GATGGGGAAGGAAGGAAAGG+TGG | 0.432710 | 3_4:-15501408 | None:intergenic |
| GGAAATATGGGAAATGCATT+TGG | 0.433355 | 3_4:+15502364 | Msa0492190:CDS |
| GGTGGATCAGTTGGAGTTGA+TGG | 0.433463 | 3_4:-15501321 | None:intergenic |
| ACTCCAACACCACCTTCAAC+TGG | 0.433721 | 3_4:+15501186 | Msa0492190:CDS |
| TGGAAGAAGAGAAGTGAGGG+AGG | 0.438103 | 3_4:-15500748 | None:intergenic |
| AAAGGTGGTGTAGGGACAGT+AGG | 0.438620 | 3_4:-15501393 | None:intergenic |
| CAAGTTCCAGGGAAGGGAGA+TGG | 0.440600 | 3_4:-15501426 | None:intergenic |
| GGAGGGTTTGATGGTGTTGA+AGG | 0.443891 | 3_4:-15501270 | None:intergenic |
| TATGATCAATTTCATGGTCT+AGG | 0.447170 | 3_4:-15502634 | None:intergenic |
| GTAGGAGTGCCAGGATCTAT+TGG | 0.447810 | 3_4:-15501375 | None:intergenic |
| GACTCATCCAGGAATAATAT+GGG | 0.459996 | 3_4:+15502324 | Msa0492190:CDS |
| GATGGTGTTGAAGGTGTAGA+AGG | 0.461590 | 3_4:-15501234 | None:intergenic |
| GAAGGAAGGAAAGGTGGTGT+AGG | 0.461768 | 3_4:-15501402 | None:intergenic |
| TTTGATGGTGTTGAAGGTGT+TGG | 0.464631 | 3_4:-15501264 | None:intergenic |
| ATGCAAACCTGTCCCTAACT+TGG | 0.469578 | 3_4:-15502537 | None:intergenic |
| AACACAAGAACTGATGGTTT+AGG | 0.469650 | 3_4:+15502442 | Msa0492190:CDS |
| TTATAGTATCCACCACTTGA+TGG | 0.470071 | 3_4:-15501291 | None:intergenic |
| AGATGGAAGAAGAGAAGTGA+GGG | 0.471668 | 3_4:-15500751 | None:intergenic |
| AAGTTCCAGGGAAGGGAGAT+GGG | 0.476491 | 3_4:-15501425 | None:intergenic |
| GGATTATGTGATGGTGTTGA+AGG | 0.479211 | 3_4:-15501243 | None:intergenic |
| CATCCAGTTGAAGGTGGTGT+TGG | 0.495066 | 3_4:-15501189 | None:intergenic |
| AAGGAAGGAAAGGTGGTGTA+GGG | 0.495495 | 3_4:-15501401 | None:intergenic |
| AAGAAGAGAAGTGAGGGAGG+GGG | 0.498549 | 3_4:-15500745 | None:intergenic |
| GGAAGGGAGATGGGGAAGGA+AGG | 0.502197 | 3_4:-15501416 | None:intergenic |
| GTAGGGACAGTAGGAGTGCC+AGG | 0.503622 | 3_4:-15501384 | None:intergenic |
| CTTTCCAACACAAGAACTGA+TGG | 0.504329 | 3_4:+15502436 | Msa0492190:CDS |
| GGAGATGGGGAAGGAAGGAA+AGG | 0.504748 | 3_4:-15501411 | None:intergenic |
| AACATTCCAGGGTTTACTCC+TGG | 0.506317 | 3_4:+15502394 | Msa0492190:CDS |
| AAGTACTGTGAACATTGAAA+AGG | 0.518214 | 3_4:-15500825 | None:intergenic |
| TAATATGGGGAATTCTAGGT+TGG | 0.520470 | 3_4:+15502338 | Msa0492190:CDS |
| TAAACCATCAGTTCTTGTGT+TGG | 0.525884 | 3_4:-15502440 | None:intergenic |
| TTACACAACTGACCAAGTTA+GGG | 0.525939 | 3_4:+15502525 | Msa0492190:CDS |
| AGCTACTGGAGGACTCATCC+AGG | 0.526289 | 3_4:+15502313 | Msa0492190:intron |
| GAATCAGAGAAAACTGATGA+AGG | 0.528354 | 3_4:-15500920 | None:intergenic |
| TATGGGGAATTCTAGGTTGG+TGG | 0.528656 | 3_4:+15502341 | Msa0492190:CDS |
| GGAAGAAGAGAAGTGAGGGA+GGG | 0.532613 | 3_4:-15500747 | None:intergenic |
| CCAGGGAAGGGAGATGGGGA+AGG | 0.539492 | 3_4:-15501420 | None:intergenic |
| GAATATCCACATCCAGTTGA+AGG | 0.540702 | 3_4:-15501198 | None:intergenic |
| CAACTGACCAAGTTAGGGAC+AGG | 0.541089 | 3_4:+15502530 | Msa0492190:CDS |
| ACACCACCTTCAACTGGATG+TGG | 0.541466 | 3_4:+15501192 | Msa0492190:CDS |
| AGGAGTACTTCTCCATCTCA+TGG | 0.541512 | 3_4:+15501105 | Msa0492190:CDS |
| AATGTCACTGGTGGATCAGT+TGG | 0.544923 | 3_4:-15501330 | None:intergenic |
| GATGGTGGTGTCAATGTCAC+TGG | 0.545935 | 3_4:-15501342 | None:intergenic |
| TACTTGCAAGTTCCAGGGAA+GGG | 0.548718 | 3_4:-15501432 | None:intergenic |
| GTTGGAAAGTGCTTGTGGTA+AGG | 0.554876 | 3_4:-15502422 | None:intergenic |
| CCATCAACACCAATAGATCC+TGG | 0.565654 | 3_4:+15501366 | Msa0492190:CDS |
| CAACTTACTTGCAAGTTCCA+GGG | 0.565925 | 3_4:-15501437 | None:intergenic |
| GGTGGTGAGCTTCCATGAGA+TGG | 0.567793 | 3_4:-15501117 | None:intergenic |
| GGATCAGTTGGAGTTGATGG+TGG | 0.570978 | 3_4:-15501318 | None:intergenic |
| TTGGTGTGACTAACATTCCA+GGG | 0.571345 | 3_4:+15502383 | Msa0492190:CDS |
| ATTGGTGTTGATGGAGATGG+TGG | 0.578943 | 3_4:-15501357 | None:intergenic |
| AACATAATGCAGGCCCACAT+AGG | 0.579774 | 3_4:+15501085 | Msa0492190:intron |
| GGTCTGGAGTGAGGTGTTAG+CGG | 0.582867 | 3_4:-15500713 | None:intergenic |
| GAAGGTGTTGGATTATGTGA+TGG | 0.585952 | 3_4:-15501252 | None:intergenic |
| GGTGATGAGCTTCCATGTGA+AGG | 0.591177 | 3_4:-15501138 | None:intergenic |
| ATGGGGAATTCTAGGTTGGT+GGG | 0.591873 | 3_4:+15502342 | Msa0492190:CDS |
| CAGTTGTGTAAGGGAACTTG+TGG | 0.593107 | 3_4:-15502513 | None:intergenic |
| AGTATCCACCACTTGATGGA+GGG | 0.594468 | 3_4:-15501287 | None:intergenic |
| GCTTGTGGTAAGGTTAGACC+AGG | 0.598119 | 3_4:-15502412 | None:intergenic |
| TTACTTGCAAGTTCCAGGGA+AGG | 0.600468 | 3_4:-15501433 | None:intergenic |
| AGTTCCAGGGAAGGGAGATG+GGG | 0.604246 | 3_4:-15501424 | None:intergenic |
| TCACCACCATCACATGGTGG+AGG | 0.604865 | 3_4:+15501156 | Msa0492190:CDS |
| GATGGAGAAGTACTCCTATG+TGG | 0.608784 | 3_4:-15501099 | None:intergenic |
| GGAAGCTCACCACCTTCACA+TGG | 0.609355 | 3_4:+15501126 | Msa0492190:CDS |
| GAGATGGAAGAAGAGAAGTG+AGG | 0.610014 | 3_4:-15500752 | None:intergenic |
| CACCACCATCACATGGTGGA+GGG | 0.611558 | 3_4:+15501157 | Msa0492190:CDS |
| ATGGAGAAGTACTCCTATGT+GGG | 0.616241 | 3_4:-15501098 | None:intergenic |
| CTGGTAAGAAGAAAGTGAGA+TGG | 0.619911 | 3_4:-15500768 | None:intergenic |
| ACCAGCAAGAAAAGATGGAG+AGG | 0.620580 | 3_4:+15500786 | Msa0492190:exon |
| TAACTTGGTCAGTTGTGTAA+GGG | 0.620778 | 3_4:-15502522 | None:intergenic |
| TAGTATCCACCACTTGATGG+AGG | 0.621034 | 3_4:-15501288 | None:intergenic |
| TCTATTGGTGTTGATGGAGA+TGG | 0.623143 | 3_4:-15501360 | None:intergenic |
| AGCTCATCACCACCATCACA+TGG | 0.624071 | 3_4:+15501150 | Msa0492190:CDS |
| TAAGACCCTCCACCATGTGA+TGG | 0.626381 | 3_4:-15501162 | None:intergenic |
| GTTAGACCAGGAGTAAACCC+TGG | 0.627036 | 3_4:-15502400 | None:intergenic |
| TTAGGAGCACTCTACAGAGA+AGG | 0.629627 | 3_4:+15502460 | Msa0492190:CDS |
| CCATCAAACCCTCCATCAAG+TGG | 0.632528 | 3_4:+15501279 | Msa0492190:CDS |
| TGGGGAATTCTAGGTTGGTG+GGG | 0.637604 | 3_4:+15502343 | Msa0492190:CDS |
| ATCATCACTTCACTCCAACA+AGG | 0.638513 | 3_4:+15502558 | Msa0492190:CDS |
| GGTGGTGTCAATGTCACTGG+TGG | 0.651179 | 3_4:-15501339 | None:intergenic |
| GATGAGCTTCCATGTGAAGG+TGG | 0.651216 | 3_4:-15501135 | None:intergenic |
| TATCCACATCCAGTTGAAGG+TGG | 0.658842 | 3_4:-15501195 | None:intergenic |
| TCAAACCCTCCATCAAGTGG+TGG | 0.659955 | 3_4:+15501282 | Msa0492190:CDS |
| CTTGTGTTGGAAAGTGCTTG+TGG | 0.664673 | 3_4:-15502427 | None:intergenic |
| GATGAAGGAGTTCCTGAATG+TGG | 0.665673 | 3_4:-15500905 | None:intergenic |
| ATGTGGAACTTCAACAGTGG+TGG | 0.667826 | 3_4:-15500888 | None:intergenic |
| GACCCTCCACCATGTGATGG+TGG | 0.670898 | 3_4:-15501159 | None:intergenic |
| AGGGAACTTGTGGTTCACCA+AGG | 0.670949 | 3_4:-15502503 | None:intergenic |
| ACTCATCCAGGAATAATATG+GGG | 0.672725 | 3_4:+15502325 | Msa0492190:CDS |
| GGTGTAGAAGGATCATGTGG+TGG | 0.697348 | 3_4:-15501222 | None:intergenic |
| TGGAGATTACAGGAATCACA+AGG | 0.719034 | 3_4:-15500868 | None:intergenic |
| TGAATGTGGAACTTCAACAG+TGG | 0.722345 | 3_4:-15500891 | None:intergenic |
| GAAGGTGTAGAAGGATCATG+TGG | 0.725266 | 3_4:-15501225 | None:intergenic |
| TCATCACCACCATCACATGG+TGG | 0.774824 | 3_4:+15501153 | Msa0492190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATATTAAACAATGTTA+GGG | - | chr3_4:15501023-15501042 | None:intergenic | 10.0% |
| !! | TAATATTTGTTTCAAATAAA+AGG | + | chr3_4:15501541-15501560 | Msa0492190:intron | 10.0% |
| !! | TTATTAAGAACATTATATTA+AGG | + | chr3_4:15502701-15502720 | Msa0492190:three_prime_UTR | 10.0% |
| !! | TTAAATATTAAACAATGTTA+GGG | - | chr3_4:15501023-15501042 | None:intergenic | 10.0% |
| !! | TAATATTTGTTTCAAATAAA+AGG | + | chr3_4:15501541-15501560 | Msa0492190:intron | 10.0% |
| !! | TTATTAAGAACATTATATTA+AGG | + | chr3_4:15502701-15502720 | Msa0492190:three_prime_UTR | 10.0% |
| !! | CTTAAATATTAAACAATGTT+AGG | - | chr3_4:15501024-15501043 | None:intergenic | 15.0% |
| !! | AGTTATACTAAAATTTAATG+TGG | - | chr3_4:15501596-15501615 | None:intergenic | 15.0% |
| !!! | TTAAATTTTAGTATAACTAG+TGG | + | chr3_4:15501598-15501617 | Msa0492190:intron | 15.0% |
| !!! | ATAGATTAGTAGTTTTAATA+AGG | + | chr3_4:15502228-15502247 | Msa0492190:intron | 15.0% |
| !! | TTTAATTAATGAAAGCTTTA+TGG | + | chr3_4:15502804-15502823 | Msa0492190:three_prime_UTR | 15.0% |
| !! | CTTAAATATTAAACAATGTT+AGG | - | chr3_4:15501024-15501043 | None:intergenic | 15.0% |
| !! | AGTTATACTAAAATTTAATG+TGG | - | chr3_4:15501596-15501615 | None:intergenic | 15.0% |
| !!! | TTAAATTTTAGTATAACTAG+TGG | + | chr3_4:15501598-15501617 | Msa0492190:intron | 15.0% |
| !!! | ATAGATTAGTAGTTTTAATA+AGG | + | chr3_4:15502228-15502247 | Msa0492190:intron | 15.0% |
| !! | TTTAATTAATGAAAGCTTTA+TGG | + | chr3_4:15502804-15502823 | Msa0492190:three_prime_UTR | 15.0% |
| !!! | AATTTTGAATACCAAAGTTA+GGG | - | chr3_4:15500960-15500979 | None:intergenic | 20.0% |
| !!! | AAATTTTGAATACCAAAGTT+AGG | - | chr3_4:15500961-15500980 | None:intergenic | 20.0% |
| !! | TGAAACAAATATTATGAAGT+AGG | - | chr3_4:15501535-15501554 | None:intergenic | 20.0% |
| !!! | TGTCTTTTTCTCTATAAAAA+TGG | + | chr3_4:15501631-15501650 | Msa0492190:intron | 20.0% |
| !! | ATATGTTAAGCAAAATATAC+AGG | + | chr3_4:15501737-15501756 | Msa0492190:intron | 20.0% |
| !! | TAATACTACTTATCTTTCTA+AGG | - | chr3_4:15501844-15501863 | None:intergenic | 20.0% |
| !!! | ATGAATTAGTTTGTTTGATT+TGG | + | chr3_4:15502669-15502688 | Msa0492190:three_prime_UTR | 20.0% |
| !!! | AATTTTGAATACCAAAGTTA+GGG | - | chr3_4:15500960-15500979 | None:intergenic | 20.0% |
| !!! | AAATTTTGAATACCAAAGTT+AGG | - | chr3_4:15500961-15500980 | None:intergenic | 20.0% |
| !! | TGAAACAAATATTATGAAGT+AGG | - | chr3_4:15501535-15501554 | None:intergenic | 20.0% |
| !!! | TGTCTTTTTCTCTATAAAAA+TGG | + | chr3_4:15501631-15501650 | Msa0492190:intron | 20.0% |
| !! | ATATGTTAAGCAAAATATAC+AGG | + | chr3_4:15501737-15501756 | Msa0492190:intron | 20.0% |
| !! | TAATACTACTTATCTTTCTA+AGG | - | chr3_4:15501844-15501863 | None:intergenic | 20.0% |
| !!! | ATGAATTAGTTTGTTTGATT+TGG | + | chr3_4:15502669-15502688 | Msa0492190:three_prime_UTR | 20.0% |
| ! | ATGTAATAAAACCCTAACTT+TGG | + | chr3_4:15500946-15500965 | Msa0492190:intron | 25.0% |
| ! | TTCAAATAAAAGGAGAGATA+TGG | + | chr3_4:15501551-15501570 | Msa0492190:intron | 25.0% |
| ! | TTAGATGCATATACACAAAA+GGG | - | chr3_4:15501805-15501824 | None:intergenic | 25.0% |
| !!! | GTTTTGATAAGGAGTATATT+TGG | + | chr3_4:15501905-15501924 | Msa0492190:intron | 25.0% |
| ! | AAGAGAGAGAGTTTATATTT+AGG | + | chr3_4:15501951-15501970 | Msa0492190:intron | 25.0% |
| !!! | TAAGGTTTTTTGTTAGTTTG+TGG | + | chr3_4:15502719-15502738 | Msa0492190:three_prime_UTR | 25.0% |
| ! | ATGTAATAAAACCCTAACTT+TGG | + | chr3_4:15500946-15500965 | Msa0492190:intron | 25.0% |
| ! | TTCAAATAAAAGGAGAGATA+TGG | + | chr3_4:15501551-15501570 | Msa0492190:intron | 25.0% |
| ! | TTAGATGCATATACACAAAA+GGG | - | chr3_4:15501805-15501824 | None:intergenic | 25.0% |
| !!! | GTTTTGATAAGGAGTATATT+TGG | + | chr3_4:15501905-15501924 | Msa0492190:intron | 25.0% |
| ! | AAGAGAGAGAGTTTATATTT+AGG | + | chr3_4:15501951-15501970 | Msa0492190:intron | 25.0% |
| !!! | TAAGGTTTTTTGTTAGTTTG+TGG | + | chr3_4:15502719-15502738 | Msa0492190:three_prime_UTR | 25.0% |
| ! | AAGTACTGTGAACATTGAAA+AGG | - | chr3_4:15500828-15500847 | None:intergenic | 30.0% |
| GGTTACTAGATATAACTACA+TGG | - | chr3_4:15501002-15501021 | None:intergenic | 30.0% | |
| TAGAGAAAAAGACACATCAT+TGG | - | chr3_4:15501625-15501644 | None:intergenic | 30.0% | |
| GTTAGATGCATATACACAAA+AGG | - | chr3_4:15501806-15501825 | None:intergenic | 30.0% | |
| ! | TACTTATCTTTCTAAGGAGA+TGG | - | chr3_4:15501838-15501857 | None:intergenic | 30.0% |
| !! | ACAGATCAACAGTTTTGATA+AGG | + | chr3_4:15501894-15501913 | Msa0492190:intron | 30.0% |
| !! | TTTTCAAGATGGCAAATGAA+GGG | + | chr3_4:15502602-15502621 | Msa0492190:CDS | 30.0% |
| TATGATCAATTTCATGGTCT+AGG | - | chr3_4:15502637-15502656 | None:intergenic | 30.0% | |
| CATGACTATGATCAATTTCA+TGG | - | chr3_4:15502643-15502662 | None:intergenic | 30.0% | |
| ! | AAGTACTGTGAACATTGAAA+AGG | - | chr3_4:15500828-15500847 | None:intergenic | 30.0% |
| GGTTACTAGATATAACTACA+TGG | - | chr3_4:15501002-15501021 | None:intergenic | 30.0% | |
| TAGAGAAAAAGACACATCAT+TGG | - | chr3_4:15501625-15501644 | None:intergenic | 30.0% | |
| GTTAGATGCATATACACAAA+AGG | - | chr3_4:15501806-15501825 | None:intergenic | 30.0% | |
| ! | TACTTATCTTTCTAAGGAGA+TGG | - | chr3_4:15501838-15501857 | None:intergenic | 30.0% |
| !! | ACAGATCAACAGTTTTGATA+AGG | + | chr3_4:15501894-15501913 | Msa0492190:intron | 30.0% |
| !! | TTTTCAAGATGGCAAATGAA+GGG | + | chr3_4:15502602-15502621 | Msa0492190:CDS | 30.0% |
| TATGATCAATTTCATGGTCT+AGG | - | chr3_4:15502637-15502656 | None:intergenic | 30.0% | |
| CATGACTATGATCAATTTCA+TGG | - | chr3_4:15502643-15502662 | None:intergenic | 30.0% | |
| TTCTTACCAGCAAGAAAAGA+TGG | + | chr3_4:15500781-15500800 | Msa0492190:exon | 35.0% | |
| GAATCAGAGAAAACTGATGA+AGG | - | chr3_4:15500923-15500942 | None:intergenic | 35.0% | |
| CCTGCATTATGTTAAAGACA+AGG | - | chr3_4:15501078-15501097 | None:intergenic | 35.0% | |
| CCTTGTCTTTAACATAATGC+AGG | + | chr3_4:15501075-15501094 | Msa0492190:intron | 35.0% | |
| TTATAGTATCCACCACTTGA+TGG | - | chr3_4:15501294-15501313 | None:intergenic | 35.0% | |
| ! | TTTCTGTGATTTTCAGCTAC+TGG | + | chr3_4:15502299-15502318 | Msa0492190:intron | 35.0% |
| GACTCATCCAGGAATAATAT+GGG | + | chr3_4:15502324-15502343 | Msa0492190:CDS | 35.0% | |
| ACTCATCCAGGAATAATATG+GGG | + | chr3_4:15502325-15502344 | Msa0492190:CDS | 35.0% | |
| AGAATTCCCCATATTATTCC+TGG | - | chr3_4:15502334-15502353 | None:intergenic | 35.0% | |
| GGAATAATATGGGGAATTCT+AGG | + | chr3_4:15502334-15502353 | Msa0492190:CDS | 35.0% | |
| TAATATGGGGAATTCTAGGT+TGG | + | chr3_4:15502338-15502357 | Msa0492190:CDS | 35.0% | |
| GGAAATATGGGAAATGCATT+TGG | + | chr3_4:15502364-15502383 | Msa0492190:CDS | 35.0% | |
| TAAACCATCAGTTCTTGTGT+TGG | - | chr3_4:15502443-15502462 | None:intergenic | 35.0% | |
| AACACAAGAACTGATGGTTT+AGG | + | chr3_4:15502442-15502461 | Msa0492190:CDS | 35.0% | |
| TAACTTGGTCAGTTGTGTAA+GGG | - | chr3_4:15502525-15502544 | None:intergenic | 35.0% | |
| TTACACAACTGACCAAGTTA+GGG | + | chr3_4:15502525-15502544 | Msa0492190:CDS | 35.0% | |
| CTTCATTTGCCATCTTGAAA+AGG | - | chr3_4:15502603-15502622 | None:intergenic | 35.0% | |
| !! | CTTTTCAAGATGGCAAATGA+AGG | + | chr3_4:15502601-15502620 | Msa0492190:CDS | 35.0% |
| TTCTTACCAGCAAGAAAAGA+TGG | + | chr3_4:15500781-15500800 | Msa0492190:exon | 35.0% | |
| GAATCAGAGAAAACTGATGA+AGG | - | chr3_4:15500923-15500942 | None:intergenic | 35.0% | |
| CCTGCATTATGTTAAAGACA+AGG | - | chr3_4:15501078-15501097 | None:intergenic | 35.0% | |
| CCTTGTCTTTAACATAATGC+AGG | + | chr3_4:15501075-15501094 | Msa0492190:intron | 35.0% | |
| TTATAGTATCCACCACTTGA+TGG | - | chr3_4:15501294-15501313 | None:intergenic | 35.0% | |
| ! | TTTCTGTGATTTTCAGCTAC+TGG | + | chr3_4:15502299-15502318 | Msa0492190:intron | 35.0% |
| GACTCATCCAGGAATAATAT+GGG | + | chr3_4:15502324-15502343 | Msa0492190:CDS | 35.0% | |
| ACTCATCCAGGAATAATATG+GGG | + | chr3_4:15502325-15502344 | Msa0492190:CDS | 35.0% | |
| AGAATTCCCCATATTATTCC+TGG | - | chr3_4:15502334-15502353 | None:intergenic | 35.0% | |
| GGAATAATATGGGGAATTCT+AGG | + | chr3_4:15502334-15502353 | Msa0492190:CDS | 35.0% | |
| TAATATGGGGAATTCTAGGT+TGG | + | chr3_4:15502338-15502357 | Msa0492190:CDS | 35.0% | |
| GGAAATATGGGAAATGCATT+TGG | + | chr3_4:15502364-15502383 | Msa0492190:CDS | 35.0% | |
| TAAACCATCAGTTCTTGTGT+TGG | - | chr3_4:15502443-15502462 | None:intergenic | 35.0% | |
| AACACAAGAACTGATGGTTT+AGG | + | chr3_4:15502442-15502461 | Msa0492190:CDS | 35.0% | |
| TAACTTGGTCAGTTGTGTAA+GGG | - | chr3_4:15502525-15502544 | None:intergenic | 35.0% | |
| TTACACAACTGACCAAGTTA+GGG | + | chr3_4:15502525-15502544 | Msa0492190:CDS | 35.0% | |
| CTTCATTTGCCATCTTGAAA+AGG | - | chr3_4:15502603-15502622 | None:intergenic | 35.0% | |
| !! | CTTTTCAAGATGGCAAATGA+AGG | + | chr3_4:15502601-15502620 | Msa0492190:CDS | 35.0% |
| AGATGGAAGAAGAGAAGTGA+GGG | - | chr3_4:15500754-15500773 | None:intergenic | 40.0% | |
| CTGGTAAGAAGAAAGTGAGA+TGG | - | chr3_4:15500771-15500790 | None:intergenic | 40.0% | |
| TGGAGATTACAGGAATCACA+AGG | - | chr3_4:15500871-15500890 | None:intergenic | 40.0% | |
| TGAATGTGGAACTTCAACAG+TGG | - | chr3_4:15500894-15500913 | None:intergenic | 40.0% | |
| ACTGTTGAAGTTCCACATTC+AGG | + | chr3_4:15500893-15500912 | Msa0492190:CDS | 40.0% | |
| !! | ATGGAGAAGTACTCCTATGT+GGG | - | chr3_4:15501101-15501120 | None:intergenic | 40.0% |
| GAATATCCACATCCAGTTGA+AGG | - | chr3_4:15501201-15501220 | None:intergenic | 40.0% | |
| ! | GGATTATGTGATGGTGTTGA+AGG | - | chr3_4:15501246-15501265 | None:intergenic | 40.0% |
| !! | GAAGGTGTTGGATTATGTGA+TGG | - | chr3_4:15501255-15501274 | None:intergenic | 40.0% |
| !! | TTTGATGGTGTTGAAGGTGT+TGG | - | chr3_4:15501267-15501286 | None:intergenic | 40.0% |
| !! | TCTATTGGTGTTGATGGAGA+TGG | - | chr3_4:15501363-15501382 | None:intergenic | 40.0% |
| CAACTTACTTGCAAGTTCCA+GGG | - | chr3_4:15501440-15501459 | None:intergenic | 40.0% | |
| GGACTCATCCAGGAATAATA+TGG | + | chr3_4:15502323-15502342 | Msa0492190:CDS | 40.0% | |
| ! | TTTGGTGTGACTAACATTCC+AGG | + | chr3_4:15502382-15502401 | Msa0492190:CDS | 40.0% |
| TTGGTGTGACTAACATTCCA+GGG | + | chr3_4:15502383-15502402 | Msa0492190:CDS | 40.0% | |
| CTTTCCAACACAAGAACTGA+TGG | + | chr3_4:15502436-15502455 | Msa0492190:CDS | 40.0% | |
| TGCTTCATTCCTTAACTCCT+TGG | + | chr3_4:15502486-15502505 | Msa0492190:CDS | 40.0% | |
| CTAACTTGGTCAGTTGTGTA+AGG | - | chr3_4:15502526-15502545 | None:intergenic | 40.0% | |
| CTTACACAACTGACCAAGTT+AGG | + | chr3_4:15502524-15502543 | Msa0492190:CDS | 40.0% | |
| ATCATCACTTCACTCCAACA+AGG | + | chr3_4:15502558-15502577 | Msa0492190:CDS | 40.0% | |
| !! | ACAAGCTCACCTTTTCAAGA+TGG | + | chr3_4:15502591-15502610 | Msa0492190:CDS | 40.0% |
| AGATGGAAGAAGAGAAGTGA+GGG | - | chr3_4:15500754-15500773 | None:intergenic | 40.0% | |
| CTGGTAAGAAGAAAGTGAGA+TGG | - | chr3_4:15500771-15500790 | None:intergenic | 40.0% | |
| TGGAGATTACAGGAATCACA+AGG | - | chr3_4:15500871-15500890 | None:intergenic | 40.0% | |
| TGAATGTGGAACTTCAACAG+TGG | - | chr3_4:15500894-15500913 | None:intergenic | 40.0% | |
| ACTGTTGAAGTTCCACATTC+AGG | + | chr3_4:15500893-15500912 | Msa0492190:CDS | 40.0% | |
| !! | ATGGAGAAGTACTCCTATGT+GGG | - | chr3_4:15501101-15501120 | None:intergenic | 40.0% |
| GAATATCCACATCCAGTTGA+AGG | - | chr3_4:15501201-15501220 | None:intergenic | 40.0% | |
| ! | GGATTATGTGATGGTGTTGA+AGG | - | chr3_4:15501246-15501265 | None:intergenic | 40.0% |
| !! | GAAGGTGTTGGATTATGTGA+TGG | - | chr3_4:15501255-15501274 | None:intergenic | 40.0% |
| !! | TTTGATGGTGTTGAAGGTGT+TGG | - | chr3_4:15501267-15501286 | None:intergenic | 40.0% |
| !! | TCTATTGGTGTTGATGGAGA+TGG | - | chr3_4:15501363-15501382 | None:intergenic | 40.0% |
| CAACTTACTTGCAAGTTCCA+GGG | - | chr3_4:15501440-15501459 | None:intergenic | 40.0% | |
| GGACTCATCCAGGAATAATA+TGG | + | chr3_4:15502323-15502342 | Msa0492190:CDS | 40.0% | |
| ! | TTTGGTGTGACTAACATTCC+AGG | + | chr3_4:15502382-15502401 | Msa0492190:CDS | 40.0% |
| TTGGTGTGACTAACATTCCA+GGG | + | chr3_4:15502383-15502402 | Msa0492190:CDS | 40.0% | |
| CTTTCCAACACAAGAACTGA+TGG | + | chr3_4:15502436-15502455 | Msa0492190:CDS | 40.0% | |
| TGCTTCATTCCTTAACTCCT+TGG | + | chr3_4:15502486-15502505 | Msa0492190:CDS | 40.0% | |
| CTAACTTGGTCAGTTGTGTA+AGG | - | chr3_4:15502526-15502545 | None:intergenic | 40.0% | |
| CTTACACAACTGACCAAGTT+AGG | + | chr3_4:15502524-15502543 | Msa0492190:CDS | 40.0% | |
| ATCATCACTTCACTCCAACA+AGG | + | chr3_4:15502558-15502577 | Msa0492190:CDS | 40.0% | |
| !! | ACAAGCTCACCTTTTCAAGA+TGG | + | chr3_4:15502591-15502610 | Msa0492190:CDS | 40.0% |
| !! | TTTTGTAGTGGTCTGGAGTG+AGG | - | chr3_4:15500725-15500744 | None:intergenic | 45.0% |
| GAGATGGAAGAAGAGAAGTG+AGG | - | chr3_4:15500755-15500774 | None:intergenic | 45.0% | |
| ACCAGCAAGAAAAGATGGAG+AGG | + | chr3_4:15500786-15500805 | Msa0492190:exon | 45.0% | |
| ! | TCCTCTCCATCTTTTCTTGC+TGG | - | chr3_4:15500790-15500809 | None:intergenic | 45.0% |
| ! | TCAACAGTGGTGGAGATTAC+AGG | - | chr3_4:15500881-15500900 | None:intergenic | 45.0% |
| ATGTGGAACTTCAACAGTGG+TGG | - | chr3_4:15500891-15500910 | None:intergenic | 45.0% | |
| GATGAAGGAGTTCCTGAATG+TGG | - | chr3_4:15500908-15500927 | None:intergenic | 45.0% | |
| AACATAATGCAGGCCCACAT+AGG | + | chr3_4:15501085-15501104 | Msa0492190:intron | 45.0% | |
| !! | GATGGAGAAGTACTCCTATG+TGG | - | chr3_4:15501102-15501121 | None:intergenic | 45.0% |
| !! | AGGAGTACTTCTCCATCTCA+TGG | + | chr3_4:15501105-15501124 | Msa0492190:CDS | 45.0% |
| TATCCACATCCAGTTGAAGG+TGG | - | chr3_4:15501198-15501217 | None:intergenic | 45.0% | |
| ! | GAAGGTGTAGAAGGATCATG+TGG | - | chr3_4:15501228-15501247 | None:intergenic | 45.0% |
| ! | GATGGTGTTGAAGGTGTAGA+AGG | - | chr3_4:15501237-15501256 | None:intergenic | 45.0% |
| AGTATCCACCACTTGATGGA+GGG | - | chr3_4:15501290-15501309 | None:intergenic | 45.0% | |
| TAGTATCCACCACTTGATGG+AGG | - | chr3_4:15501291-15501310 | None:intergenic | 45.0% | |
| ! | AATGTCACTGGTGGATCAGT+TGG | - | chr3_4:15501333-15501352 | None:intergenic | 45.0% |
| !! | ATTGGTGTTGATGGAGATGG+TGG | - | chr3_4:15501360-15501379 | None:intergenic | 45.0% |
| !! | CCAGGATCTATTGGTGTTGA+TGG | - | chr3_4:15501369-15501388 | None:intergenic | 45.0% |
| CCATCAACACCAATAGATCC+TGG | + | chr3_4:15501366-15501385 | Msa0492190:CDS | 45.0% | |
| AAGGAAGGAAAGGTGGTGTA+GGG | - | chr3_4:15501404-15501423 | None:intergenic | 45.0% | |
| TACTTGCAAGTTCCAGGGAA+GGG | - | chr3_4:15501435-15501454 | None:intergenic | 45.0% | |
| TTACTTGCAAGTTCCAGGGA+AGG | - | chr3_4:15501436-15501455 | None:intergenic | 45.0% | |
| GCAACTTACTTGCAAGTTCC+AGG | - | chr3_4:15501441-15501460 | None:intergenic | 45.0% | |
| ! | CTGTGATTTTCAGCTACTGG+AGG | + | chr3_4:15502302-15502321 | Msa0492190:intron | 45.0% |
| ! | TATGGGGAATTCTAGGTTGG+TGG | + | chr3_4:15502341-15502360 | Msa0492190:CDS | 45.0% |
| !! | ATGGGGAATTCTAGGTTGGT+GGG | + | chr3_4:15502342-15502361 | Msa0492190:CDS | 45.0% |
| !! | TCTAGGTTGGTGGGGAAATA+TGG | + | chr3_4:15502351-15502370 | Msa0492190:CDS | 45.0% |
| !! | CTAGGTTGGTGGGGAAATAT+GGG | + | chr3_4:15502352-15502371 | Msa0492190:CDS | 45.0% |
| AACATTCCAGGGTTTACTCC+TGG | + | chr3_4:15502394-15502413 | Msa0492190:CDS | 45.0% | |
| !! | GTTGGAAAGTGCTTGTGGTA+AGG | - | chr3_4:15502425-15502444 | None:intergenic | 45.0% |
| !! | CTTGTGTTGGAAAGTGCTTG+TGG | - | chr3_4:15502430-15502449 | None:intergenic | 45.0% |
| !! | TTAGGAGCACTCTACAGAGA+AGG | + | chr3_4:15502460-15502479 | Msa0492190:CDS | 45.0% |
| TGTGGTTCACCAAGGAGTTA+AGG | - | chr3_4:15502498-15502517 | None:intergenic | 45.0% | |
| CAGTTGTGTAAGGGAACTTG+TGG | - | chr3_4:15502516-15502535 | None:intergenic | 45.0% | |
| ATGCAAACCTGTCCCTAACT+TGG | - | chr3_4:15502540-15502559 | None:intergenic | 45.0% | |
| !! | TTTTGTAGTGGTCTGGAGTG+AGG | - | chr3_4:15500725-15500744 | None:intergenic | 45.0% |
| GAGATGGAAGAAGAGAAGTG+AGG | - | chr3_4:15500755-15500774 | None:intergenic | 45.0% | |
| ACCAGCAAGAAAAGATGGAG+AGG | + | chr3_4:15500786-15500805 | Msa0492190:exon | 45.0% | |
| ! | TCCTCTCCATCTTTTCTTGC+TGG | - | chr3_4:15500790-15500809 | None:intergenic | 45.0% |
| ! | TCAACAGTGGTGGAGATTAC+AGG | - | chr3_4:15500881-15500900 | None:intergenic | 45.0% |
| ATGTGGAACTTCAACAGTGG+TGG | - | chr3_4:15500891-15500910 | None:intergenic | 45.0% | |
| GATGAAGGAGTTCCTGAATG+TGG | - | chr3_4:15500908-15500927 | None:intergenic | 45.0% | |
| AACATAATGCAGGCCCACAT+AGG | + | chr3_4:15501085-15501104 | Msa0492190:intron | 45.0% | |
| !! | GATGGAGAAGTACTCCTATG+TGG | - | chr3_4:15501102-15501121 | None:intergenic | 45.0% |
| !! | AGGAGTACTTCTCCATCTCA+TGG | + | chr3_4:15501105-15501124 | Msa0492190:CDS | 45.0% |
| TATCCACATCCAGTTGAAGG+TGG | - | chr3_4:15501198-15501217 | None:intergenic | 45.0% | |
| ! | GAAGGTGTAGAAGGATCATG+TGG | - | chr3_4:15501228-15501247 | None:intergenic | 45.0% |
| ! | GATGGTGTTGAAGGTGTAGA+AGG | - | chr3_4:15501237-15501256 | None:intergenic | 45.0% |
| AGTATCCACCACTTGATGGA+GGG | - | chr3_4:15501290-15501309 | None:intergenic | 45.0% | |
| TAGTATCCACCACTTGATGG+AGG | - | chr3_4:15501291-15501310 | None:intergenic | 45.0% | |
| ! | AATGTCACTGGTGGATCAGT+TGG | - | chr3_4:15501333-15501352 | None:intergenic | 45.0% |
| !! | ATTGGTGTTGATGGAGATGG+TGG | - | chr3_4:15501360-15501379 | None:intergenic | 45.0% |
| !! | CCAGGATCTATTGGTGTTGA+TGG | - | chr3_4:15501369-15501388 | None:intergenic | 45.0% |
| CCATCAACACCAATAGATCC+TGG | + | chr3_4:15501366-15501385 | Msa0492190:CDS | 45.0% | |
| AAGGAAGGAAAGGTGGTGTA+GGG | - | chr3_4:15501404-15501423 | None:intergenic | 45.0% | |
| TACTTGCAAGTTCCAGGGAA+GGG | - | chr3_4:15501435-15501454 | None:intergenic | 45.0% | |
| TTACTTGCAAGTTCCAGGGA+AGG | - | chr3_4:15501436-15501455 | None:intergenic | 45.0% | |
| GCAACTTACTTGCAAGTTCC+AGG | - | chr3_4:15501441-15501460 | None:intergenic | 45.0% | |
| ! | CTGTGATTTTCAGCTACTGG+AGG | + | chr3_4:15502302-15502321 | Msa0492190:intron | 45.0% |
| ! | TATGGGGAATTCTAGGTTGG+TGG | + | chr3_4:15502341-15502360 | Msa0492190:CDS | 45.0% |
| !! | ATGGGGAATTCTAGGTTGGT+GGG | + | chr3_4:15502342-15502361 | Msa0492190:CDS | 45.0% |
| !! | TCTAGGTTGGTGGGGAAATA+TGG | + | chr3_4:15502351-15502370 | Msa0492190:CDS | 45.0% |
| !! | CTAGGTTGGTGGGGAAATAT+GGG | + | chr3_4:15502352-15502371 | Msa0492190:CDS | 45.0% |
| AACATTCCAGGGTTTACTCC+TGG | + | chr3_4:15502394-15502413 | Msa0492190:CDS | 45.0% | |
| !! | GTTGGAAAGTGCTTGTGGTA+AGG | - | chr3_4:15502425-15502444 | None:intergenic | 45.0% |
| !! | CTTGTGTTGGAAAGTGCTTG+TGG | - | chr3_4:15502430-15502449 | None:intergenic | 45.0% |
| !! | TTAGGAGCACTCTACAGAGA+AGG | + | chr3_4:15502460-15502479 | Msa0492190:CDS | 45.0% |
| TGTGGTTCACCAAGGAGTTA+AGG | - | chr3_4:15502498-15502517 | None:intergenic | 45.0% | |
| CAGTTGTGTAAGGGAACTTG+TGG | - | chr3_4:15502516-15502535 | None:intergenic | 45.0% | |
| ATGCAAACCTGTCCCTAACT+TGG | - | chr3_4:15502540-15502559 | None:intergenic | 45.0% | |
| !!! | AATTATACTATTTTTTTTAA+TGG | - | chr3_4:15502115-15502134 | None:intergenic | 5.0% |
| !!! | AATTATACTATTTTTTTTAA+TGG | - | chr3_4:15502115-15502134 | None:intergenic | 5.0% |
| AAGAAGAGAAGTGAGGGAGG+GGG | - | chr3_4:15500748-15500767 | None:intergenic | 50.0% | |
| GAAGAAGAGAAGTGAGGGAG+GGG | - | chr3_4:15500749-15500768 | None:intergenic | 50.0% | |
| GGAAGAAGAGAAGTGAGGGA+GGG | - | chr3_4:15500750-15500769 | None:intergenic | 50.0% | |
| TGGAAGAAGAGAAGTGAGGG+AGG | - | chr3_4:15500751-15500770 | None:intergenic | 50.0% | |
| GATGAGCTTCCATGTGAAGG+TGG | - | chr3_4:15501138-15501157 | None:intergenic | 50.0% | |
| GGTGATGAGCTTCCATGTGA+AGG | - | chr3_4:15501141-15501160 | None:intergenic | 50.0% | |
| AGCTCATCACCACCATCACA+TGG | + | chr3_4:15501150-15501169 | Msa0492190:CDS | 50.0% | |
| TCATCACCACCATCACATGG+TGG | + | chr3_4:15501153-15501172 | Msa0492190:CDS | 50.0% | |
| TAAGACCCTCCACCATGTGA+TGG | - | chr3_4:15501165-15501184 | None:intergenic | 50.0% | |
| ACTCCAACACCACCTTCAAC+TGG | + | chr3_4:15501186-15501205 | Msa0492190:CDS | 50.0% | |
| CATCCAGTTGAAGGTGGTGT+TGG | - | chr3_4:15501192-15501211 | None:intergenic | 50.0% | |
| ACACCACCTTCAACTGGATG+TGG | + | chr3_4:15501192-15501211 | Msa0492190:CDS | 50.0% | |
| GGTGTAGAAGGATCATGTGG+TGG | - | chr3_4:15501225-15501244 | None:intergenic | 50.0% | |
| !! | GGAGGGTTTGATGGTGTTGA+AGG | - | chr3_4:15501273-15501292 | None:intergenic | 50.0% |
| CCACTTGATGGAGGGTTTGA+TGG | - | chr3_4:15501282-15501301 | None:intergenic | 50.0% | |
| CCATCAAACCCTCCATCAAG+TGG | + | chr3_4:15501279-15501298 | Msa0492190:CDS | 50.0% | |
| TCAAACCCTCCATCAAGTGG+TGG | + | chr3_4:15501282-15501301 | Msa0492190:CDS | 50.0% | |
| !! | GGATCAGTTGGAGTTGATGG+TGG | - | chr3_4:15501321-15501340 | None:intergenic | 50.0% |
| GGTGGATCAGTTGGAGTTGA+TGG | - | chr3_4:15501324-15501343 | None:intergenic | 50.0% | |
| ! | GATGGTGGTGTCAATGTCAC+TGG | - | chr3_4:15501345-15501364 | None:intergenic | 50.0% |
| !! | GTAGGAGTGCCAGGATCTAT+TGG | - | chr3_4:15501378-15501397 | None:intergenic | 50.0% |
| AAAGGTGGTGTAGGGACAGT+AGG | - | chr3_4:15501396-15501415 | None:intergenic | 50.0% | |
| GAAGGAAGGAAAGGTGGTGT+AGG | - | chr3_4:15501405-15501424 | None:intergenic | 50.0% | |
| AAGTTCCAGGGAAGGGAGAT+GGG | - | chr3_4:15501428-15501447 | None:intergenic | 50.0% | |
| !! | TGGGGAATTCTAGGTTGGTG+GGG | + | chr3_4:15502343-15502362 | Msa0492190:CDS | 50.0% |
| GTTAGACCAGGAGTAAACCC+TGG | - | chr3_4:15502403-15502422 | None:intergenic | 50.0% | |
| GCTTGTGGTAAGGTTAGACC+AGG | - | chr3_4:15502415-15502434 | None:intergenic | 50.0% | |
| AGGGAACTTGTGGTTCACCA+AGG | - | chr3_4:15502506-15502525 | None:intergenic | 50.0% | |
| CAACTGACCAAGTTAGGGAC+AGG | + | chr3_4:15502530-15502549 | Msa0492190:CDS | 50.0% | |
| ! | TTGTGTTGCAGCAGCCTTGT+TGG | - | chr3_4:15502575-15502594 | None:intergenic | 50.0% |
| AAGAAGAGAAGTGAGGGAGG+GGG | - | chr3_4:15500748-15500767 | None:intergenic | 50.0% | |
| GAAGAAGAGAAGTGAGGGAG+GGG | - | chr3_4:15500749-15500768 | None:intergenic | 50.0% | |
| GGAAGAAGAGAAGTGAGGGA+GGG | - | chr3_4:15500750-15500769 | None:intergenic | 50.0% | |
| TGGAAGAAGAGAAGTGAGGG+AGG | - | chr3_4:15500751-15500770 | None:intergenic | 50.0% | |
| GATGAGCTTCCATGTGAAGG+TGG | - | chr3_4:15501138-15501157 | None:intergenic | 50.0% | |
| GGTGATGAGCTTCCATGTGA+AGG | - | chr3_4:15501141-15501160 | None:intergenic | 50.0% | |
| AGCTCATCACCACCATCACA+TGG | + | chr3_4:15501150-15501169 | Msa0492190:CDS | 50.0% | |
| TCATCACCACCATCACATGG+TGG | + | chr3_4:15501153-15501172 | Msa0492190:CDS | 50.0% | |
| TAAGACCCTCCACCATGTGA+TGG | - | chr3_4:15501165-15501184 | None:intergenic | 50.0% | |
| ACTCCAACACCACCTTCAAC+TGG | + | chr3_4:15501186-15501205 | Msa0492190:CDS | 50.0% | |
| CATCCAGTTGAAGGTGGTGT+TGG | - | chr3_4:15501192-15501211 | None:intergenic | 50.0% | |
| ACACCACCTTCAACTGGATG+TGG | + | chr3_4:15501192-15501211 | Msa0492190:CDS | 50.0% | |
| GGTGTAGAAGGATCATGTGG+TGG | - | chr3_4:15501225-15501244 | None:intergenic | 50.0% | |
| !! | GGAGGGTTTGATGGTGTTGA+AGG | - | chr3_4:15501273-15501292 | None:intergenic | 50.0% |
| CCACTTGATGGAGGGTTTGA+TGG | - | chr3_4:15501282-15501301 | None:intergenic | 50.0% | |
| CCATCAAACCCTCCATCAAG+TGG | + | chr3_4:15501279-15501298 | Msa0492190:CDS | 50.0% | |
| TCAAACCCTCCATCAAGTGG+TGG | + | chr3_4:15501282-15501301 | Msa0492190:CDS | 50.0% | |
| !! | GGATCAGTTGGAGTTGATGG+TGG | - | chr3_4:15501321-15501340 | None:intergenic | 50.0% |
| GGTGGATCAGTTGGAGTTGA+TGG | - | chr3_4:15501324-15501343 | None:intergenic | 50.0% | |
| ! | GATGGTGGTGTCAATGTCAC+TGG | - | chr3_4:15501345-15501364 | None:intergenic | 50.0% |
| !! | GTAGGAGTGCCAGGATCTAT+TGG | - | chr3_4:15501378-15501397 | None:intergenic | 50.0% |
| AAAGGTGGTGTAGGGACAGT+AGG | - | chr3_4:15501396-15501415 | None:intergenic | 50.0% | |
| GAAGGAAGGAAAGGTGGTGT+AGG | - | chr3_4:15501405-15501424 | None:intergenic | 50.0% | |
| AAGTTCCAGGGAAGGGAGAT+GGG | - | chr3_4:15501428-15501447 | None:intergenic | 50.0% | |
| !! | TGGGGAATTCTAGGTTGGTG+GGG | + | chr3_4:15502343-15502362 | Msa0492190:CDS | 50.0% |
| GTTAGACCAGGAGTAAACCC+TGG | - | chr3_4:15502403-15502422 | None:intergenic | 50.0% | |
| GCTTGTGGTAAGGTTAGACC+AGG | - | chr3_4:15502415-15502434 | None:intergenic | 50.0% | |
| AGGGAACTTGTGGTTCACCA+AGG | - | chr3_4:15502506-15502525 | None:intergenic | 50.0% | |
| CAACTGACCAAGTTAGGGAC+AGG | + | chr3_4:15502530-15502549 | Msa0492190:CDS | 50.0% | |
| ! | TTGTGTTGCAGCAGCCTTGT+TGG | - | chr3_4:15502575-15502594 | None:intergenic | 50.0% |
| !! | GAGGGGGTTTTGTAGTGGTC+TGG | - | chr3_4:15500732-15500751 | None:intergenic | 55.0% |
| !! | TGAGGGAGGGGGTTTTGTAG+TGG | - | chr3_4:15500737-15500756 | None:intergenic | 55.0% |
| GGTGGTGAGCTTCCATGAGA+TGG | - | chr3_4:15501120-15501139 | None:intergenic | 55.0% | |
| GGAAGCTCACCACCTTCACA+TGG | + | chr3_4:15501126-15501145 | Msa0492190:CDS | 55.0% | |
| TCACCACCATCACATGGTGG+AGG | + | chr3_4:15501156-15501175 | Msa0492190:CDS | 55.0% | |
| ! | CACCACCATCACATGGTGGA+GGG | + | chr3_4:15501157-15501176 | Msa0492190:CDS | 55.0% |
| ! | GGTGGTGTCAATGTCACTGG+TGG | - | chr3_4:15501342-15501361 | None:intergenic | 55.0% |
| GATGGGGAAGGAAGGAAAGG+TGG | - | chr3_4:15501411-15501430 | None:intergenic | 55.0% | |
| GGAGATGGGGAAGGAAGGAA+AGG | - | chr3_4:15501414-15501433 | None:intergenic | 55.0% | |
| AGTTCCAGGGAAGGGAGATG+GGG | - | chr3_4:15501427-15501446 | None:intergenic | 55.0% | |
| CAAGTTCCAGGGAAGGGAGA+TGG | - | chr3_4:15501429-15501448 | None:intergenic | 55.0% | |
| AGCTACTGGAGGACTCATCC+AGG | + | chr3_4:15502313-15502332 | Msa0492190:intron | 55.0% | |
| !! | GAGGGGGTTTTGTAGTGGTC+TGG | - | chr3_4:15500732-15500751 | None:intergenic | 55.0% |
| !! | TGAGGGAGGGGGTTTTGTAG+TGG | - | chr3_4:15500737-15500756 | None:intergenic | 55.0% |
| GGTGGTGAGCTTCCATGAGA+TGG | - | chr3_4:15501120-15501139 | None:intergenic | 55.0% | |
| GGAAGCTCACCACCTTCACA+TGG | + | chr3_4:15501126-15501145 | Msa0492190:CDS | 55.0% | |
| TCACCACCATCACATGGTGG+AGG | + | chr3_4:15501156-15501175 | Msa0492190:CDS | 55.0% | |
| ! | CACCACCATCACATGGTGGA+GGG | + | chr3_4:15501157-15501176 | Msa0492190:CDS | 55.0% |
| ! | GGTGGTGTCAATGTCACTGG+TGG | - | chr3_4:15501342-15501361 | None:intergenic | 55.0% |
| GATGGGGAAGGAAGGAAAGG+TGG | - | chr3_4:15501411-15501430 | None:intergenic | 55.0% | |
| GGAGATGGGGAAGGAAGGAA+AGG | - | chr3_4:15501414-15501433 | None:intergenic | 55.0% | |
| AGTTCCAGGGAAGGGAGATG+GGG | - | chr3_4:15501427-15501446 | None:intergenic | 55.0% | |
| CAAGTTCCAGGGAAGGGAGA+TGG | - | chr3_4:15501429-15501448 | None:intergenic | 55.0% | |
| AGCTACTGGAGGACTCATCC+AGG | + | chr3_4:15502313-15502332 | Msa0492190:intron | 55.0% | |
| GACCCTCCACCATGTGATGG+TGG | - | chr3_4:15501162-15501181 | None:intergenic | 60.0% | |
| !! | GTAGGGACAGTAGGAGTGCC+AGG | - | chr3_4:15501387-15501406 | None:intergenic | 60.0% |
| GGAAGGGAGATGGGGAAGGA+AGG | - | chr3_4:15501419-15501438 | None:intergenic | 60.0% | |
| GACCCTCCACCATGTGATGG+TGG | - | chr3_4:15501162-15501181 | None:intergenic | 60.0% | |
| !! | GTAGGGACAGTAGGAGTGCC+AGG | - | chr3_4:15501387-15501406 | None:intergenic | 60.0% |
| GGAAGGGAGATGGGGAAGGA+AGG | - | chr3_4:15501419-15501438 | None:intergenic | 60.0% | |
| CCAGGGAAGGGAGATGGGGA+AGG | - | chr3_4:15501423-15501442 | None:intergenic | 65.0% | |
| CCTTCCCCATCTCCCTTCCC+TGG | + | chr3_4:15501420-15501439 | Msa0492190:CDS | 65.0% | |
| CCAGGGAAGGGAGATGGGGA+AGG | - | chr3_4:15501423-15501442 | None:intergenic | 65.0% | |
| CCTTCCCCATCTCCCTTCCC+TGG | + | chr3_4:15501420-15501439 | Msa0492190:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 15500714 | 15502834 | 15500714 | ID=Msa0492190;Name=Msa0492190 |
| chr3_4 | mRNA | 15500714 | 15502834 | 15500714 | ID=Msa0492190-mRNA-1;Parent=Msa0492190;Name=Msa0492190-mRNA-1;_AED=0.02;_eAED=0.02;_QI=86|1|1|1|1|1|3|189|277 |
| chr3_4 | exon | 15500714 | 15500947 | 15500714 | ID=Msa0492190-mRNA-1:exon:4534;Parent=Msa0492190-mRNA-1 |
| chr3_4 | exon | 15501097 | 15501451 | 15501097 | ID=Msa0492190-mRNA-1:exon:4535;Parent=Msa0492190-mRNA-1 |
| chr3_4 | exon | 15502315 | 15502834 | 15502315 | ID=Msa0492190-mRNA-1:exon:4536;Parent=Msa0492190-mRNA-1 |
| chr3_4 | five_prime_UTR | 15500714 | 15500799 | 15500714 | ID=Msa0492190-mRNA-1:five_prime_utr;Parent=Msa0492190-mRNA-1 |
| chr3_4 | CDS | 15500800 | 15500947 | 15500800 | ID=Msa0492190-mRNA-1:cds;Parent=Msa0492190-mRNA-1 |
| chr3_4 | CDS | 15501097 | 15501451 | 15501097 | ID=Msa0492190-mRNA-1:cds;Parent=Msa0492190-mRNA-1 |
| chr3_4 | CDS | 15502315 | 15502645 | 15502315 | ID=Msa0492190-mRNA-1:cds;Parent=Msa0492190-mRNA-1 |
| chr3_4 | three_prime_UTR | 15502646 | 15502834 | 15502646 | ID=Msa0492190-mRNA-1:three_prime_utr;Parent=Msa0492190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
