Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372220 | RHN69050.1 | 86.820 | 478 | 39 | 4 | 94 | 571 | 19 | 472 | 0.0 | 833 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372220 | A0A396IUG1 | 86.820 | 478 | 39 | 4 | 94 | 571 | 19 | 472 | 0.0 | 833 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0372220 | 0.802327 | 5.913145e-49 | -8.615850e-47 |
| Msa0020930 | Msa0372220 | 0.800316 | 1.526328e-48 | -8.615850e-47 |
| Msa0040450 | Msa0372220 | 0.822110 | 2.821871e-53 | -8.615850e-47 |
| Msa0110970 | Msa0372220 | 0.804974 | 1.669399e-49 | -8.615850e-47 |
| Msa0157290 | Msa0372220 | 0.801954 | 7.055446e-49 | -8.615850e-47 |
| Msa0159930 | Msa0372220 | 0.802379 | 5.767975e-49 | -8.615850e-47 |
| Msa0372220 | Msa0419820 | 0.803830 | 2.891235e-49 | -8.615850e-47 |
| Msa0372220 | Msa0420840 | 0.820527 | 6.543870e-53 | -8.615850e-47 |
| Msa0372220 | Msa0459770 | -0.802904 | 4.496365e-49 | -8.615850e-47 |
| Msa0372220 | Msa0479170 | 0.801392 | 9.199470e-49 | -8.615850e-47 |
| Msa0372220 | Msa0479660 | 0.810051 | 1.396705e-50 | -8.615850e-47 |
| Msa0372220 | Msa0480000 | 0.800053 | 1.725791e-48 | -8.615850e-47 |
| Msa0372220 | Msa0480980 | 0.815026 | 1.141306e-51 | -8.615850e-47 |
| Msa0372220 | Msa0484780 | 0.801273 | 9.733473e-49 | -8.615850e-47 |
| Msa0372220 | Msa0512390 | 0.937918 | 1.584078e-98 | -8.615850e-47 |
| Msa0372220 | Msa0581760 | 0.820950 | 5.229914e-53 | -8.615850e-47 |
| Msa0372220 | Msa0689010 | 0.818345 | 2.057843e-52 | -8.615850e-47 |
| Msa0372220 | Msa0880140 | 0.802417 | 5.665099e-49 | -8.615850e-47 |
| Msa0372220 | Msa1063960 | 0.801336 | 9.448642e-49 | -8.615850e-47 |
| Msa0372220 | Msa1079590 | 0.803990 | 2.678196e-49 | -8.615850e-47 |
| Msa0372220 | Msa1082500 | 0.813441 | 2.555480e-51 | -8.615850e-47 |
| Msa0372220 | Msa1097800 | 0.811896 | 5.567388e-51 | -8.615850e-47 |
| Msa0372220 | Msa1222970 | 0.803767 | 2.979346e-49 | -8.615850e-47 |
| Msa0372220 | Msa1238930 | 0.806353 | 8.573292e-50 | -8.615850e-47 |
| Msa0372220 | Msa1264020 | 0.830185 | 3.385260e-55 | -8.615850e-47 |
| Msa0372220 | Msa1283860 | 0.810870 | 9.297546e-51 | -8.615850e-47 |
| Msa0372220 | Msa1308380 | 0.803067 | 4.160683e-49 | -8.615850e-47 |
| Msa0372220 | Msa1356280 | 0.842399 | 2.647952e-58 | -8.615850e-47 |
| Msa0372220 | Msa1367080 | 0.813047 | 3.119239e-51 | -8.615850e-47 |
| Msa0372220 | Msa1415640 | 0.803562 | 3.285229e-49 | -8.615850e-47 |
| Msa0239800 | Msa0372220 | 0.805114 | 1.560458e-49 | -8.615850e-47 |
| Msa0317510 | Msa0372220 | 0.804752 | 1.857637e-49 | -8.615850e-47 |
| Msa0321860 | Msa0372220 | 0.801374 | 9.281354e-49 | -8.615850e-47 |
| Msa0333720 | Msa0372220 | -0.805216 | 1.485661e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372220 | MtrunA17_Chr3g0120561 | 86.820 | 478 | 39 | 4 | 94 | 571 | 19 | 472 | 0.0 | 833 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372220 | AT1G02960.2 | 31.892 | 370 | 218 | 10 | 218 | 568 | 117 | 471 | 3.56e-39 | 150 |
| Msa0372220 | AT1G02960.1 | 30.811 | 370 | 213 | 11 | 218 | 568 | 117 | 462 | 1.82e-35 | 139 |
| Msa0372220 | AT1G02960.5 | 30.325 | 277 | 162 | 8 | 240 | 499 | 139 | 401 | 2.01e-20 | 94.4 |
| Msa0372220 | AT1G02960.3 | 28.881 | 277 | 157 | 9 | 240 | 499 | 139 | 392 | 3.99e-17 | 84.3 |
| Msa0372220 | AT1G02960.6 | 28.125 | 256 | 153 | 8 | 240 | 478 | 139 | 380 | 3.81e-11 | 65.5 |
| Msa0372220 | AT1G02960.4 | 28.125 | 256 | 153 | 8 | 240 | 478 | 139 | 380 | 3.81e-11 | 65.5 |
Find 129 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTAAAATTCAGGTGAATT+TGG | 0.182393 | 3_1:-70532515 | Msa0372220:intron |
| GATAGATTTCACAATGCTTT+AGG | 0.198003 | 3_1:-70532975 | Msa0372220:CDS |
| GCGCGATTAGATTTGTTAAA+AGG | 0.237162 | 3_1:-70536234 | Msa0372220:intron |
| CACTCAGAAGACAGCATTTC+CGG | 0.253174 | 3_1:-70536505 | Msa0372220:CDS |
| ATAGATTTCACAATGCTTTA+GGG | 0.281106 | 3_1:-70532974 | Msa0372220:CDS |
| TCAACAGCTTTCATAATTTC+AGG | 0.309850 | 3_1:+70533523 | None:intergenic |
| GGAGGTGATGAAGATGTAAT+TGG | 0.311573 | 3_1:+70536463 | None:intergenic |
| TAATGAAGGTGATTAGATTA+AGG | 0.321095 | 3_1:+70536442 | None:intergenic |
| GATCCGCTATCCACAGGTTC+AGG | 0.328904 | 3_1:+70533150 | None:intergenic |
| AGGCCTTCTGCAAGTTTAGA+TGG | 0.329905 | 3_1:-70533496 | Msa0372220:CDS |
| GCGTAATGGTCGTCGTCATC+TGG | 0.339375 | 3_1:+70536411 | None:intergenic |
| GGGAGAGGTGGTTGCTGATT+CGG | 0.356470 | 3_1:-70535175 | Msa0372220:CDS |
| TGAGTTTAATCTTCCCCTAA+TGG | 0.371118 | 3_1:-70533398 | Msa0372220:CDS |
| CTCGTACAAGCTAAAGGAAT+GGG | 0.371558 | 3_1:-70531539 | Msa0372220:CDS |
| AACTCTTGGACTAAAGATAA+TGG | 0.371714 | 3_1:+70531487 | None:intergenic |
| TATACACTAACTTTACATCT+TGG | 0.380511 | 3_1:+70530900 | None:intergenic |
| TCATCAGTGACACATAACTA+TGG | 0.382019 | 3_1:-70533583 | Msa0372220:CDS |
| TCTGACCACATGAATCAAAC+TGG | 0.383101 | 3_1:+70531183 | None:intergenic |
| CAACAACCGTCTCTGGCAAA+TGG | 0.384581 | 3_1:+70533187 | None:intergenic |
| TGATAACTGTTGCAGGCATC+TGG | 0.391339 | 3_1:-70533636 | Msa0372220:intron |
| CTTCAATCTCTAATATTGAT+AGG | 0.393259 | 3_1:-70533549 | Msa0372220:CDS |
| TGCATTTCAATGGACCTTAG+AGG | 0.395662 | 3_1:-70530940 | Msa0372220:three_prime_UTR |
| AGTAATTCTCATGTGTTGAT+TGG | 0.396579 | 3_1:+70533028 | None:intergenic |
| AATTGCATTTACCTCCTCTA+AGG | 0.402894 | 3_1:+70530926 | None:intergenic |
| CCACCTCTCCCAATTCATTC+CGG | 0.417889 | 3_1:+70535187 | None:intergenic |
| GGGAGAGGTGGTTGCTGATT+CGG | 0.418461 | 3_1:-70535737 | Msa0372220:intron |
| GGGTGACAACCGGAATGAAT+TGG | 0.424438 | 3_1:-70535196 | Msa0372220:CDS |
| GTAGATGCTGACTGTGTAAA+TGG | 0.425247 | 3_1:-70537346 | Msa0372220:CDS |
| TCACTGTCAACAACCGTCTC+TGG | 0.431199 | 3_1:+70533180 | None:intergenic |
| TTATGAAAGCTGTTGATCAT+AGG | 0.434946 | 3_1:-70533516 | Msa0372220:CDS |
| GGGTGTGGGTTGCATTTCAA+TGG | 0.437201 | 3_1:-70530950 | Msa0372220:three_prime_UTR |
| AATGAATAAGTAGAAATTAC+CGG | 0.438451 | 3_1:+70536486 | None:intergenic |
| TCATCATTTCTGATAAATTG+AGG | 0.438657 | 3_1:+70534696 | None:intergenic |
| AGTGAATAGAATAGCAAATT+CGG | 0.442548 | 3_1:-70531088 | Msa0372220:three_prime_UTR |
| ATATGATATGAGGATGGTTA+TGG | 0.446602 | 3_1:-70537299 | Msa0372220:CDS |
| TCAACATTGTCGCAAACTCT+TGG | 0.448555 | 3_1:+70531473 | None:intergenic |
| GGTGACAACCGGAATGAATT+GGG | 0.448874 | 3_1:-70535195 | Msa0372220:CDS |
| AGAACAACAACTACCTCTTC+CGG | 0.454301 | 3_1:-70536256 | Msa0372220:CDS |
| TCAGTAACATAGAGGCTTCA+AGG | 0.455476 | 3_1:+70530868 | None:intergenic |
| CATCATTTCTGATAAATTGA+GGG | 0.460688 | 3_1:+70534697 | None:intergenic |
| CCACGTGATAATCAAAGAAA+AGG | 0.463174 | 3_1:-70533246 | Msa0372220:CDS |
| CTTACCACGGAGGGTGAATA+CGG | 0.464811 | 3_1:+70531429 | None:intergenic |
| CAAGCTAAAGGAATGGGGTT+TGG | 0.465002 | 3_1:-70531533 | Msa0372220:CDS |
| TAAGCGTGAACGAACCTTGT+TGG | 0.467219 | 3_1:+70536359 | None:intergenic |
| GGATTAAGCTCCCCACTTCA+AGG | 0.468431 | 3_1:+70531450 | None:intergenic |
| GGGTTTGGTGGCAGCAAAGA+TGG | 0.469797 | 3_1:-70531518 | Msa0372220:CDS |
| AACAACCGTCTCTGGCAAAT+GGG | 0.479682 | 3_1:+70533188 | None:intergenic |
| AAATCTAATCGCGCCGGAAG+AGG | 0.480654 | 3_1:+70536243 | None:intergenic |
| ACACATGAGAATTACTTTCC+CGG | 0.482287 | 3_1:-70533021 | Msa0372220:CDS |
| AATGTGGTGATGGTGGTCTC+TGG | 0.492020 | 3_1:-70537249 | Msa0372220:CDS |
| CACATGAGAATTACTTTCCC+GGG | 0.495518 | 3_1:-70533020 | Msa0372220:CDS |
| ATCTGGAAATTGATTAATGA+AGG | 0.499518 | 3_1:+70536428 | None:intergenic |
| AGCTTCAGTTTCAGAAGGCT+CGG | 0.501715 | 3_1:+70533429 | None:intergenic |
| TTCTCAAAAGCAAATTCATC+CGG | 0.509214 | 3_1:-70534603 | Msa0372220:CDS |
| ACACCTTTGAATTGATGTAA+AGG | 0.511685 | 3_1:-70531035 | Msa0372220:three_prime_UTR |
| ACTTCAATGAGGGTGACAAC+CGG | 0.512111 | 3_1:-70535206 | Msa0372220:CDS |
| TTTCCTTTACATCAATTCAA+AGG | 0.512245 | 3_1:+70531032 | None:intergenic |
| CCTCCTGGATAAGACTGATC+TGG | 0.514851 | 3_1:-70533359 | Msa0372220:intron |
| CGTCACCATCAACAATGAAA+AGG | 0.515031 | 3_1:+70537275 | None:intergenic |
| GCTAAAGGAATGGGGTTTGG+TGG | 0.518261 | 3_1:-70531530 | Msa0372220:CDS |
| CCACCAGATCAGTCTTATCC+AGG | 0.521993 | 3_1:+70533356 | None:intergenic |
| AAACAATCAGCTTTCCATCC+AGG | 0.522382 | 3_1:+70532462 | None:intergenic |
| AGATGAGGAGGTTGAAATGC+CGG | 0.528294 | 3_1:-70535229 | Msa0372220:CDS |
| TCTCGTACAAGCTAAAGGAA+TGG | 0.530008 | 3_1:-70531540 | Msa0372220:CDS |
| CTATCAATATTAGAGATTGA+AGG | 0.532326 | 3_1:+70533550 | None:intergenic |
| ACGAAAGAAGATTAGCGTAA+TGG | 0.532658 | 3_1:+70536397 | None:intergenic |
| TTGTCACCCTCATTGAAGTC+CGG | 0.534546 | 3_1:+70535210 | None:intergenic |
| TGATCAATCTATATGATATG+AGG | 0.534918 | 3_1:-70537309 | Msa0372220:CDS |
| CTGACCACATGAATCAAACT+GGG | 0.538852 | 3_1:+70531184 | None:intergenic |
| ATCCGCTATCCACAGGTTCA+GGG | 0.539339 | 3_1:+70533151 | None:intergenic |
| TCTGTTATCGCTGAAAGTGT+TGG | 0.540296 | 3_1:-70532945 | Msa0372220:CDS |
| AAGCATCATTTCAAGATACC+TGG | 0.547835 | 3_1:-70532480 | Msa0372220:CDS |
| TTTCATCCTCAGTAACATAG+AGG | 0.548157 | 3_1:+70530860 | None:intergenic |
| CTTGATGATCCGCTATCCAC+AGG | 0.549070 | 3_1:+70533144 | None:intergenic |
| GGTCGTAATCATGCTGCTGA+TGG | 0.558737 | 3_1:-70530820 | Msa0372220:three_prime_UTR |
| GAACAGGAAGGAAGTTCAAG+TGG | 0.574315 | 3_1:-70531253 | Msa0372220:intron |
| CATCAGTGACACATAACTAT+GGG | 0.578285 | 3_1:-70533582 | Msa0372220:CDS |
| GGTGACGGCGAATGTGGTGA+TGG | 0.583711 | 3_1:-70537259 | Msa0372220:CDS |
| AACGAACCTTGTTGGTAGCG+TGG | 0.586095 | 3_1:+70536367 | None:intergenic |
| TTTCAGAGAAATAAGAACAC+AGG | 0.586673 | 3_1:+70531214 | None:intergenic |
| CGACAATGTTGACCTTGAAG+TGG | 0.588515 | 3_1:-70531462 | Msa0372220:CDS |
| TGAAGGTGATTAGATTAAGG+AGG | 0.589732 | 3_1:+70536445 | None:intergenic |
| CAAGCTGGAGCTAGACCAGA+TGG | 0.589856 | 3_1:-70532730 | Msa0372220:intron |
| CCGGAATGAATTGGGAGAGG+TGG | 0.590158 | 3_1:-70535187 | Msa0372220:CDS |
| TCTCGAAGATGATGACATAG+TGG | 0.595575 | 3_1:-70533467 | Msa0372220:CDS |
| TTTGGACGAGTCTGGTCGAG+AGG | 0.596618 | 3_1:+70534727 | None:intergenic |
| TATATCCCATTTGCCAGAGA+CGG | 0.597841 | 3_1:-70533193 | Msa0372220:CDS |
| TCAGAAGTTGCTCGAAGATG+AGG | 0.601211 | 3_1:-70535244 | Msa0372220:intron |
| GAAATGCTGTCTTCTGAGTG+TGG | 0.604310 | 3_1:+70536508 | None:intergenic |
| TGACGACTCCCCTGAACCTG+TGG | 0.607193 | 3_1:-70533160 | Msa0372220:CDS |
| GGGAAAGAAAATGCAGACAA+TGG | 0.609349 | 3_1:-70533000 | Msa0372220:CDS |
| GGACGAGCTTCAGTTTCAGA+AGG | 0.609678 | 3_1:+70533424 | None:intergenic |
| ATCATGATGATGTGTGTAGA+GGG | 0.610988 | 3_1:+70530775 | None:intergenic |
| CGGATCATCAAGTGACAATG+AGG | 0.613056 | 3_1:-70533133 | Msa0372220:intron |
| GACAATGTTGACCTTGAAGT+GGG | 0.615907 | 3_1:-70531461 | Msa0372220:CDS |
| CAATCTATATGATATGAGGA+TGG | 0.616102 | 3_1:-70537305 | Msa0372220:CDS |
| AGGCATCTGGAACAAAGCTA+AGG | 0.618629 | 3_1:-70533623 | Msa0372220:CDS |
| CAACCGGAATGAATTGGGAG+AGG | 0.619194 | 3_1:-70535190 | Msa0372220:CDS |
| ATTCTATTCACTACAAACAG+AGG | 0.619409 | 3_1:+70531099 | None:intergenic |
| GTTGATGGTGACGGCGAATG+TGG | 0.619609 | 3_1:-70537265 | Msa0372220:CDS |
| ACAAAACCACGCTACCAACA+AGG | 0.621213 | 3_1:-70536373 | Msa0372220:intron |
| TCCCCTGAACCTGTGGATAG+CGG | 0.621484 | 3_1:-70533153 | Msa0372220:CDS |
| ACACATAACTATGGGCACAC+TGG | 0.625934 | 3_1:-70533574 | Msa0372220:CDS |
| TGAAATGCCGGACTTCAATG+AGG | 0.626528 | 3_1:-70535217 | Msa0372220:CDS |
| TTTCCATCTAAACTTGCAGA+AGG | 0.628441 | 3_1:+70533493 | None:intergenic |
| TTTAACAAATCTAATCGCGC+CGG | 0.629342 | 3_1:+70536237 | None:intergenic |
| TCGTACAAGCTAAAGGAATG+GGG | 0.631068 | 3_1:-70531538 | Msa0372220:CDS |
| AGGGGAAGATTAAACTCATG+TGG | 0.635532 | 3_1:+70533403 | None:intergenic |
| TCCGCTATCCACAGGTTCAG+GGG | 0.635538 | 3_1:+70533152 | None:intergenic |
| ATTTCAATGGACCTTAGAGG+AGG | 0.635630 | 3_1:-70530937 | Msa0372220:three_prime_UTR |
| TTGGAGCACATAACTCATTG+AGG | 0.636699 | 3_1:-70532926 | Msa0372220:intron |
| AGATAATGTTTCTGAAGATG+AGG | 0.638275 | 3_1:-70535145 | Msa0372220:intron |
| TTGAAGCCTCTATGTTACTG+AGG | 0.640878 | 3_1:-70530866 | Msa0372220:three_prime_UTR |
| CTCATTTAGCAAGTATACCG+AGG | 0.644633 | 3_1:-70532432 | Msa0372220:intron |
| CATAGCAATCTTACCACGGA+GGG | 0.644759 | 3_1:+70531420 | None:intergenic |
| AACAGGAAGGAAGTTCAAGT+GGG | 0.650687 | 3_1:-70531252 | Msa0372220:intron |
| GAAGTTGCTCGAAGATGAGG+AGG | 0.651692 | 3_1:-70535241 | Msa0372220:CDS |
| ATCATTTCAAGATACCTGGA+TGG | 0.654090 | 3_1:-70532476 | Msa0372220:CDS |
| GAAATGCCGGACTTCAATGA+GGG | 0.659726 | 3_1:-70535216 | Msa0372220:CDS |
| GACGGCGAATGTGGTGATGG+TGG | 0.663620 | 3_1:-70537256 | Msa0372220:CDS |
| GACCACATGAATCAAACTGG+GGG | 0.672181 | 3_1:+70531186 | None:intergenic |
| TATCATGATGATGTGTGTAG+AGG | 0.683605 | 3_1:+70530774 | None:intergenic |
| AGATACTGTTTCTAACAATG+AGG | 0.683730 | 3_1:-70535707 | Msa0372220:intron |
| TGACCACATGAATCAAACTG+GGG | 0.686062 | 3_1:+70531185 | None:intergenic |
| AACACTTTCAGCGATAACAG+AGG | 0.693650 | 3_1:+70532947 | None:intergenic |
| CCAGATCAGTCTTATCCAGG+AGG | 0.693888 | 3_1:+70533359 | None:intergenic |
| TAATCCGTATTCACCCTCCG+TGG | 0.736498 | 3_1:-70531433 | Msa0372220:intron |
| ACATAGCAATCTTACCACGG+AGG | 0.757199 | 3_1:+70531419 | None:intergenic |
| ACAATGTTGACCTTGAAGTG+GGG | 0.758346 | 3_1:-70531460 | Msa0372220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAGTAATTAATTAATATTT+AGG | + | chr3_1:70531929-70531948 | None:intergenic | 10.0% |
| !!! | TTTTTTGAAAGAAATAATTT+CGG | - | chr3_1:70533135-70533154 | Msa0372220:CDS | 10.0% |
| !!! | TATTTTTTATATTTTCATCT+CGG | - | chr3_1:70533919-70533938 | Msa0372220:intron | 10.0% |
| !!! | AGATTTACTTTTTTTTTTTT+TGG | - | chr3_1:70534397-70534416 | Msa0372220:intron | 10.0% |
| !!! | GAAATTTTAATTTATTCATT+TGG | - | chr3_1:70537294-70537313 | Msa0372220:CDS | 10.0% |
| !! | TTAAAACAACAATTAGAAAA+GGG | + | chr3_1:70531077-70531096 | None:intergenic | 15.0% |
| !! | ATTAAAACAACAATTAGAAA+AGG | + | chr3_1:70531078-70531097 | None:intergenic | 15.0% |
| !!! | TTTACATCATTTTATCTATT+TGG | + | chr3_1:70531211-70531230 | None:intergenic | 15.0% |
| !! | TGTAAAATTATTCAGAAATT+AGG | - | chr3_1:70531225-70531244 | Msa0372220:CDS | 15.0% |
| !!! | ATGATTTTATCTTTTATGTT+TGG | - | chr3_1:70532537-70532556 | Msa0372220:intron | 15.0% |
| !! | TCATATTAGTTCATAAATAA+TGG | + | chr3_1:70532755-70532774 | None:intergenic | 15.0% |
| !!! | TATCTTTTCTTTATTCTTAA+AGG | - | chr3_1:70532818-70532837 | Msa0372220:intron | 15.0% |
| !!! | ATCTTTTCTTTATTCTTAAA+GGG | - | chr3_1:70532819-70532838 | Msa0372220:intron | 15.0% |
| !! | TTGTAATTGTAATTAAATGA+GGG | + | chr3_1:70532853-70532872 | None:intergenic | 15.0% |
| !! | ATTGTAATTGTAATTAAATG+AGG | + | chr3_1:70532854-70532873 | None:intergenic | 15.0% |
| !!! | TATCGTTTCTTTATTTTTAA+AGG | - | chr3_1:70533375-70533394 | Msa0372220:CDS | 15.0% |
| !!! | ATCGTTTCTTTATTTTTAAA+GGG | - | chr3_1:70533376-70533395 | Msa0372220:CDS | 15.0% |
| !!! | AATTAATCATAGTTCTAAAA+GGG | + | chr3_1:70533793-70533812 | None:intergenic | 15.0% |
| !!! | TAATTAATCATAGTTCTAAA+AGG | + | chr3_1:70533794-70533813 | None:intergenic | 15.0% |
| !! | TAATTATATCAATGTTTGAA+TGG | - | chr3_1:70534452-70534471 | Msa0372220:intron | 15.0% |
| !!! | TGTTTTTTCTTTTCATTTTT+TGG | - | chr3_1:70535522-70535541 | Msa0372220:intron | 15.0% |
| !!! | GTTTTTTCTTTTCATTTTTT+GGG | - | chr3_1:70535523-70535542 | Msa0372220:intron | 15.0% |
| !!! | TTTTTTCTTTTCATTTTTTG+GGG | - | chr3_1:70535524-70535543 | Msa0372220:intron | 15.0% |
| !!! | TTTTTAATAGTTTGTATGTT+GGG | - | chr3_1:70536131-70536150 | Msa0372220:intron | 15.0% |
| !!! | AATGATAATTTTACTTGAAA+TGG | - | chr3_1:70536487-70536506 | Msa0372220:CDS | 15.0% |
| !! | CATAATCAAACATTAAATAA+GGG | + | chr3_1:70536538-70536557 | None:intergenic | 15.0% |
| !! | TCATAATCAAACATTAAATA+AGG | + | chr3_1:70536539-70536558 | None:intergenic | 15.0% |
| !! | TAAAACAACAATTAGAAAAG+GGG | + | chr3_1:70531076-70531095 | None:intergenic | 20.0% |
| !! | TAAGAGTAAAATGTTTGATT+AGG | + | chr3_1:70531593-70531612 | None:intergenic | 20.0% |
| !! | AATGAATAAGTAGAAATTAC+CGG | + | chr3_1:70531652-70531671 | None:intergenic | 20.0% |
| !! | TTATTAATTCATTCTTACTC+AGG | - | chr3_1:70532068-70532087 | Msa0372220:intron | 20.0% |
| !!! | TACAATTATTATTGTTGTTG+TGG | - | chr3_1:70532306-70532325 | Msa0372220:intron | 20.0% |
| !! | AAAAAACATAAACAAACACA+TGG | + | chr3_1:70532494-70532513 | None:intergenic | 20.0% |
| !!! | TTATGTTTTTTCCTTTTGTT+TGG | - | chr3_1:70532503-70532522 | Msa0372220:CDS | 20.0% |
| !!! | TATGTTTTTTCCTTTTGTTT+GGG | - | chr3_1:70532504-70532523 | Msa0372220:CDS | 20.0% |
| !!! | GTCTTTGAAAGATATAATTT+CGG | - | chr3_1:70532577-70532596 | Msa0372220:intron | 20.0% |
| !! | TTATGTTAACATATGAGTAA+TGG | - | chr3_1:70532600-70532619 | Msa0372220:intron | 20.0% |
| !!! | TACAATTATTATTGTTGTTG+TGG | - | chr3_1:70532306-70532325 | Msa0372220:intron | 20.0% |
| !! | TTAATAACAACCAAACAAAA+GGG | + | chr3_1:70533074-70533093 | None:intergenic | 20.0% |
| !!! | GTGATTTTATCTTTTATGTT+TGG | - | chr3_1:70533094-70533113 | Msa0372220:intron | 20.0% |
| !! | TCATATTAGTTCATAAACAA+TGG | + | chr3_1:70533312-70533331 | None:intergenic | 20.0% |
| !!! | AAATATTTTCAGTTTCAACA+GGG | + | chr3_1:70533614-70533633 | None:intergenic | 20.0% |
| !!! | AAACTGAAAATATTTGTTAG+TGG | - | chr3_1:70533619-70533638 | Msa0372220:CDS | 20.0% |
| !!! | AACTGAAAATATTTGTTAGT+GGG | - | chr3_1:70533620-70533639 | Msa0372220:CDS | 20.0% |
| !! | TAATCTGTTAGTTATATCTT+GGG | + | chr3_1:70533975-70533994 | None:intergenic | 20.0% |
| !! | TTAATCTGTTAGTTATATCT+TGG | + | chr3_1:70533976-70533995 | None:intergenic | 20.0% |
| !! | TGTTTCTTCAAAAAAGTAAA+TGG | - | chr3_1:70534167-70534186 | Msa0372220:intron | 20.0% |
| !! | AAAAAAGTAAATGGATGTTA+TGG | - | chr3_1:70534176-70534195 | Msa0372220:intron | 20.0% |
| !!! | ATATGTGACATTTTTAATGA+TGG | - | chr3_1:70534206-70534225 | Msa0372220:intron | 20.0% |
| !! | TTGACAATATTTGCAAAAAT+GGG | + | chr3_1:70534241-70534260 | None:intergenic | 20.0% |
| !! | ATTGACAATATTTGCAAAAA+TGG | + | chr3_1:70534242-70534261 | None:intergenic | 20.0% |
| !! | TGTAAAGAAAATATGTTAGA+GGG | + | chr3_1:70534360-70534379 | None:intergenic | 20.0% |
| !! | TTGTAAAGAAAATATGTTAG+AGG | + | chr3_1:70534361-70534380 | None:intergenic | 20.0% |
| !!! | CATATTTTCTTTACAAAAGA+TGG | - | chr3_1:70534365-70534384 | Msa0372220:intron | 20.0% |
| !! | TTACAAAGAAACTAAAATTC+AGG | - | chr3_1:70535611-70535630 | Msa0372220:intron | 20.0% |
| !!! | TGGAGTTTTTTATATTATCA+AGG | + | chr3_1:70535908-70535927 | None:intergenic | 20.0% |
| !!! | AGAAACTTTTTATTAGAAAG+TGG | + | chr3_1:70535928-70535947 | None:intergenic | 20.0% |
| !!! | CTTTTTAATAGTTTGTATGT+TGG | - | chr3_1:70536130-70536149 | Msa0372220:intron | 20.0% |
| !! | TATAATAGAAAACTTAGTCT+TGG | + | chr3_1:70536170-70536189 | None:intergenic | 20.0% |
| !! | AATGTTTGATTATGATTTGA+TGG | - | chr3_1:70536544-70536563 | Msa0372220:intron | 20.0% |
| ! | TGATCAATCTATATGATATG+AGG | - | chr3_1:70530826-70530845 | Msa0372220:three_prime_UTR | 25.0% |
| ! | TTAGAAAAGGGGTAAAATTA+AGG | + | chr3_1:70531065-70531084 | None:intergenic | 25.0% |
| ! | TTATTCAGAAATTAGGTCTA+AGG | - | chr3_1:70531232-70531251 | Msa0372220:CDS | 25.0% |
| ! | TAGATTTAAATTGAGTAGCA+AGG | - | chr3_1:70531380-70531399 | Msa0372220:intron | 25.0% |
| ! | ATTAGGATTGAATTGAAGAA+AGG | + | chr3_1:70531576-70531595 | None:intergenic | 25.0% |
| !! | ACATTTTACTCTTACATTAC+AGG | - | chr3_1:70531599-70531618 | Msa0372220:intron | 25.0% |
| ! | TAATGAAGGTGATTAGATTA+AGG | + | chr3_1:70531696-70531715 | None:intergenic | 25.0% |
| ! | ATCTGGAAATTGATTAATGA+AGG | + | chr3_1:70531710-70531729 | None:intergenic | 25.0% |
| ! | AAACTTTAATACCTGAAATG+AGG | + | chr3_1:70532042-70532061 | None:intergenic | 25.0% |
| ! | GTTATTCTTATAAGCTATCT+TGG | - | chr3_1:70532147-70532166 | Msa0372220:intron | 25.0% |
| ! | TTAATAACAACCCAAACAAA+AGG | + | chr3_1:70532517-70532536 | None:intergenic | 25.0% |
| ! | ACTAAACCAATCTACATTTA+AGG | + | chr3_1:70532644-70532663 | None:intergenic | 25.0% |
| ! | CTTAATAACAACCAAACAAA+AGG | + | chr3_1:70533075-70533094 | None:intergenic | 25.0% |
| ! | TAATGTTAGCAAATGAGTAA+TGG | - | chr3_1:70533158-70533177 | Msa0372220:CDS | 25.0% |
| ! | AACTAAACCAATCTACATTT+AGG | + | chr3_1:70532645-70532664 | None:intergenic | 25.0% |
| ! | CATCATTTCTGATAAATTGA+GGG | + | chr3_1:70533441-70533460 | None:intergenic | 25.0% |
| ! | TCATCATTTCTGATAAATTG+AGG | + | chr3_1:70533442-70533461 | None:intergenic | 25.0% |
| !! | CAAATATTTTCAGTTTCAAC+AGG | + | chr3_1:70533615-70533634 | None:intergenic | 25.0% |
| !! | ACTGAAAATATTTGTTAGTG+GGG | - | chr3_1:70533621-70533640 | Msa0372220:CDS | 25.0% |
| ! | CTATCAATATTAGAGATTGA+AGG | + | chr3_1:70534588-70534607 | None:intergenic | 25.0% |
| ! | CTTCAATCTCTAATATTGAT+AGG | - | chr3_1:70534586-70534605 | Msa0372220:CDS | 25.0% |
| ! | ATATACATGGAAAAGTAAAC+AGG | + | chr3_1:70534842-70534861 | None:intergenic | 25.0% |
| !! | TATTAGTCTATTGTCATATC+TGG | - | chr3_1:70535056-70535075 | Msa0372220:intron | 25.0% |
| ! | TTAAATCTGTTTACTTGTAC+AGG | - | chr3_1:70535081-70535100 | Msa0372220:intron | 25.0% |
| ! | ATAGATTTCACAATGCTTTA+GGG | - | chr3_1:70535161-70535180 | Msa0372220:CDS | 25.0% |
| ! | TTCAATTGCATAAAAATACC+AGG | + | chr3_1:70535251-70535270 | None:intergenic | 25.0% |
| ! | AATATTTGAAAAACTACAGC+AGG | - | chr3_1:70535335-70535354 | Msa0372220:intron | 25.0% |
| !!! | ACATTTGTTTCTAATACACA+TGG | - | chr3_1:70535573-70535592 | Msa0372220:intron | 25.0% |
| ! | AACTAAAATTCAGGTGAATT+TGG | - | chr3_1:70535620-70535639 | Msa0372220:intron | 25.0% |
| !!! | GTGAAGTTTTATAAATCCAT+AGG | - | chr3_1:70535725-70535744 | Msa0372220:CDS | 25.0% |
| ! | GTATAAAGCATAAACTTTCA+GGG | + | chr3_1:70535773-70535792 | None:intergenic | 25.0% |
| ! | AGTATAAAGCATAAACTTTC+AGG | + | chr3_1:70535774-70535793 | None:intergenic | 25.0% |
| !!! | TTTATACTTAAGAAAGTGCT+TGG | - | chr3_1:70535786-70535805 | Msa0372220:intron | 25.0% |
| !!! | TTATACTTAAGAAAGTGCTT+GGG | - | chr3_1:70535787-70535806 | Msa0372220:intron | 25.0% |
| !! | TAAGGGTATATCTTAAATGT+AGG | + | chr3_1:70536521-70536540 | None:intergenic | 25.0% |
| ! | TTTGATTATGATTTGATGGA+AGG | - | chr3_1:70536548-70536567 | Msa0372220:intron | 25.0% |
| !! | TTCTTGATCTATTTCAGTTT+TGG | - | chr3_1:70536854-70536873 | Msa0372220:intron | 25.0% |
| ! | AGTGAATAGAATAGCAAATT+CGG | - | chr3_1:70537047-70537066 | Msa0372220:intron | 25.0% |
| ! | TTTCCTTTACATCAATTCAA+AGG | + | chr3_1:70537106-70537125 | None:intergenic | 25.0% |
| ! | TGCAATTTCGATAGTAAAAA+AGG | - | chr3_1:70537163-70537182 | Msa0372220:intron | 25.0% |
| ! | GCAATTTCGATAGTAAAAAA+GGG | - | chr3_1:70537164-70537183 | Msa0372220:intron | 25.0% |
| ! | CAATTTCGATAGTAAAAAAG+GGG | - | chr3_1:70537165-70537184 | Msa0372220:intron | 25.0% |
| ! | TATACACTAACTTTACATCT+TGG | + | chr3_1:70537238-70537257 | None:intergenic | 25.0% |
| CAATCTATATGATATGAGGA+TGG | - | chr3_1:70530830-70530849 | Msa0372220:three_prime_UTR | 30.0% | |
| ATATGATATGAGGATGGTTA+TGG | - | chr3_1:70530836-70530855 | Msa0372220:three_prime_UTR | 30.0% | |
| AGAAACATTGATGTTGAAAC+CGG | - | chr3_1:70530920-70530939 | Msa0372220:three_prime_UTR | 30.0% | |
| AAACCTAAACTTGCCATATT+TGG | - | chr3_1:70531322-70531341 | Msa0372220:intron | 30.0% | |
| GGAGATAGAAGTAAGAAAAT+TGG | + | chr3_1:70531555-70531574 | None:intergenic | 30.0% | |
| !! | AGATACTGTTTCTAACAATG+AGG | - | chr3_1:70532428-70532447 | Msa0372220:intron | 30.0% |
| AATCTACATTTAAGGACATC+AGG | + | chr3_1:70532636-70532655 | None:intergenic | 30.0% | |
| TGATGTCCTTAAATGTAGAT+TGG | - | chr3_1:70532635-70532654 | Msa0372220:intron | 30.0% | |
| AAATTAGTCCTTGTGATTTG+AGG | - | chr3_1:70532665-70532684 | Msa0372220:intron | 30.0% | |
| ATGACCAACATTGTATCTTT+CGG | - | chr3_1:70532771-70532790 | Msa0372220:CDS | 30.0% | |
| ! | AGATAATGTTTCTGAAGATG+AGG | - | chr3_1:70532990-70533009 | Msa0372220:CDS | 30.0% |
| TTGTTACCATGTGTTTGTTT+AGG | - | chr3_1:70532485-70532504 | Msa0372220:CDS | 30.0% | |
| GAAATACCTAAACAAACACA+TGG | + | chr3_1:70533052-70533071 | None:intergenic | 30.0% | |
| ! | TTAGGTATTTCCCTTTTGTT+TGG | - | chr3_1:70533061-70533080 | Msa0372220:intron | 30.0% |
| ! | TAAATTGAGGGCCATATTTT+TGG | + | chr3_1:70533429-70533448 | None:intergenic | 30.0% |
| TTCTCAAAAGCAAATTCATC+CGG | - | chr3_1:70533532-70533551 | Msa0372220:CDS | 30.0% | |
| ! | CAAGAAAAATGCTAGTTTCT+GGG | - | chr3_1:70533564-70533583 | Msa0372220:CDS | 30.0% |
| ! | TTTATGCTCTGAATTGAGTA+AGG | - | chr3_1:70533762-70533781 | Msa0372220:intron | 30.0% |
| TAAGTGATGTTAAGTTCTGT+AGG | - | chr3_1:70533854-70533873 | Msa0372220:intron | 30.0% | |
| !! | ATGACTTTTATTTCCCCTAT+TGG | - | chr3_1:70533944-70533963 | Msa0372220:intron | 30.0% |
| TATCTTGGGTTTAACCAATA+GGG | + | chr3_1:70533961-70533980 | None:intergenic | 30.0% | |
| ATATCTTGGGTTTAACCAAT+AGG | + | chr3_1:70533962-70533981 | None:intergenic | 30.0% | |
| !! | TATTTTAGATATACCCTGTG+TGG | - | chr3_1:70534045-70534064 | Msa0372220:intron | 30.0% |
| TTGAATTTCAAATCCACACA+GGG | + | chr3_1:70534061-70534080 | None:intergenic | 30.0% | |
| TTTGAATTTCAAATCCACAC+AGG | + | chr3_1:70534062-70534081 | None:intergenic | 30.0% | |
| ACTTCTCTTCATGTATCAAA+AGG | + | chr3_1:70534271-70534290 | None:intergenic | 30.0% | |
| TCAACAGCTTTCATAATTTC+AGG | + | chr3_1:70534615-70534634 | None:intergenic | 30.0% | |
| TTATGAAAGCTGTTGATCAT+AGG | - | chr3_1:70534619-70534638 | Msa0372220:CDS | 30.0% | |
| AAACAGGTGTCAAAGAATAA+CGG | + | chr3_1:70534826-70534845 | None:intergenic | 30.0% | |
| ! | AATGAGGTATTACTGTTCTA+TGG | - | chr3_1:70535018-70535037 | Msa0372220:intron | 30.0% |
| ! | AGTAATTCTCATGTGTTGAT+TGG | + | chr3_1:70535110-70535129 | None:intergenic | 30.0% |
| GATAGATTTCACAATGCTTT+AGG | - | chr3_1:70535160-70535179 | Msa0372220:CDS | 30.0% | |
| TTTATGAAATTGTGCAGAAC+TGG | - | chr3_1:70535312-70535331 | Msa0372220:intron | 30.0% | |
| ! | AAAGCAAAAGTTTTACCATC+TGG | + | chr3_1:70535423-70535442 | None:intergenic | 30.0% |
| TTTCTGTGCAATAGAGTAAA+TGG | + | chr3_1:70535485-70535504 | None:intergenic | 30.0% | |
| !!! | TTCTTTTCATTTTTTGGGGT+TGG | - | chr3_1:70535528-70535547 | Msa0372220:intron | 30.0% |
| !!! | TCTTTTCATTTTTTGGGGTT+GGG | - | chr3_1:70535529-70535548 | Msa0372220:intron | 30.0% |
| GGATTTATAAAACTTCACCT+CGG | + | chr3_1:70535723-70535742 | None:intergenic | 30.0% | |
| TCTCCTTAACTATATCTTGA+AGG | - | chr3_1:70535956-70535975 | Msa0372220:intron | 30.0% | |
| ! | CTATTCCATTTGATTTAGAG+AGG | - | chr3_1:70536352-70536371 | Msa0372220:intron | 30.0% |
| ! | AATTTTCTCGTACAAGCTAA+AGG | - | chr3_1:70536590-70536609 | Msa0372220:intron | 30.0% |
| AACTCTTGGACTAAAGATAA+TGG | + | chr3_1:70536651-70536670 | None:intergenic | 30.0% | |
| AGTTTAATTGCTCTATAGCT+TGG | - | chr3_1:70536768-70536787 | Msa0372220:intron | 30.0% | |
| GTTTAATTGCTCTATAGCTT+GGG | - | chr3_1:70536769-70536788 | Msa0372220:intron | 30.0% | |
| TTAATATCTACTCTTTGTCG+TGG | - | chr3_1:70536796-70536815 | Msa0372220:intron | 30.0% | |
| TAATATCTACTCTTTGTCGT+GGG | - | chr3_1:70536797-70536816 | Msa0372220:intron | 30.0% | |
| !!! | TTCAGTTTTGGTTATTGAAC+AGG | - | chr3_1:70536866-70536885 | Msa0372220:intron | 30.0% |
| TTTCAGAGAAATAAGAACAC+AGG | + | chr3_1:70536924-70536943 | None:intergenic | 30.0% | |
| ATTCTATTCACTACAAACAG+AGG | + | chr3_1:70537039-70537058 | None:intergenic | 30.0% | |
| ACACCTTTGAATTGATGTAA+AGG | - | chr3_1:70537100-70537119 | Msa0372220:intron | 30.0% | |
| ! | ATGGTCCTTTTCATTGTTGA+TGG | - | chr3_1:70530855-70530874 | Msa0372220:three_prime_UTR | 35.0% |
| !!! | CTTTTCATTGTTGATGGTGA+CGG | - | chr3_1:70530861-70530880 | Msa0372220:three_prime_UTR | 35.0% |
| ATTGGTGTGTTAGAAAGAAG+AGG | - | chr3_1:70530986-70531005 | Msa0372220:three_prime_UTR | 35.0% | |
| AGAATGTAAGGAATGACAAG+AGG | - | chr3_1:70531013-70531032 | Msa0372220:three_prime_UTR | 35.0% | |
| ACTCCAAATATGGCAAGTTT+AGG | + | chr3_1:70531328-70531347 | None:intergenic | 35.0% | |
| TTTCAGTAGATTTACGTACG+CGG | + | chr3_1:70531532-70531551 | None:intergenic | 35.0% | |
| TGAAGGTGATTAGATTAAGG+AGG | + | chr3_1:70531693-70531712 | None:intergenic | 35.0% | |
| ACGAAAGAAGATTAGCGTAA+TGG | + | chr3_1:70531741-70531760 | None:intergenic | 35.0% | |
| TTTAACAAATCTAATCGCGC+CGG | + | chr3_1:70531901-70531920 | None:intergenic | 35.0% | |
| !! | GCGCGATTAGATTTGTTAAA+AGG | - | chr3_1:70531901-70531920 | Msa0372220:intron | 35.0% |
| AAGTTAGTCCTCAAATCACA+AGG | + | chr3_1:70532676-70532695 | None:intergenic | 35.0% | |
| TGTCAGATGGAATACGTTTA+AGG | - | chr3_1:70532695-70532714 | Msa0372220:intron | 35.0% | |
| ! | TAAGGACAATGCATGTTTTG+TGG | - | chr3_1:70532713-70532732 | Msa0372220:intron | 35.0% |
| ! | CAATCTACATTTAGGACATC+AGG | + | chr3_1:70533194-70533213 | None:intergenic | 35.0% |
| CTGATGTCCTAAATGTAGAT+TGG | - | chr3_1:70533192-70533211 | Msa0372220:CDS | 35.0% | |
| AAATTAGTCCTTGTGATTCG+AGG | - | chr3_1:70533222-70533241 | Msa0372220:CDS | 35.0% | |
| TGTCTGATGGAATACGTTTA+AGG | - | chr3_1:70533252-70533271 | Msa0372220:CDS | 35.0% | |
| TAAGGACAATGCATGTATAG+TGG | - | chr3_1:70533270-70533289 | Msa0372220:intron | 35.0% | |
| !! | GGATGAATTTGCTTTTGAGA+AGG | + | chr3_1:70533533-70533552 | None:intergenic | 35.0% |
| ! | CCAGAAACTAGCATTTTTCT+TGG | + | chr3_1:70533566-70533585 | None:intergenic | 35.0% |
| ! | CCAAGAAAAATGCTAGTTTC+TGG | - | chr3_1:70533563-70533582 | Msa0372220:CDS | 35.0% |
| AGTATTTAGATGAGACAGAC+AGG | + | chr3_1:70533688-70533707 | None:intergenic | 35.0% | |
| TGTCTGTCTCATCTAAATAC+TGG | - | chr3_1:70533687-70533706 | Msa0372220:intron | 35.0% | |
| ACAAATCCTGAAATGTAGCA+TGG | + | chr3_1:70533735-70533754 | None:intergenic | 35.0% | |
| CTTAACATCACTTACAGACT+AGG | + | chr3_1:70533848-70533867 | None:intergenic | 35.0% | |
| ATCTTGGGTTTAACCAATAG+GGG | + | chr3_1:70533960-70533979 | None:intergenic | 35.0% | |
| ATACACGACAACTAGTAATG+CGG | + | chr3_1:70534026-70534045 | None:intergenic | 35.0% | |
| TTTGCTCGAGTGTTAGTAAA+TGG | - | chr3_1:70534143-70534162 | Msa0372220:intron | 35.0% | |
| GTAAATGGATGTTATGGATC+TGG | - | chr3_1:70534182-70534201 | Msa0372220:intron | 35.0% | |
| TCATCAGTGACACATAACTA+TGG | - | chr3_1:70534552-70534571 | Msa0372220:intron | 35.0% | |
| CATCAGTGACACATAACTAT+GGG | - | chr3_1:70534553-70534572 | Msa0372220:intron | 35.0% | |
| TTTCCATCTAAACTTGCAGA+AGG | + | chr3_1:70534645-70534664 | None:intergenic | 35.0% | |
| TGAGTTTAATCTTCCCCTAA+TGG | - | chr3_1:70534737-70534756 | Msa0372220:CDS | 35.0% | |
| TACTGAAAAATAGAGGTGGA+AGG | + | chr3_1:70534868-70534887 | None:intergenic | 35.0% | |
| TGGATACTGAAAAATAGAGG+TGG | + | chr3_1:70534872-70534891 | None:intergenic | 35.0% | |
| ACGTGGATACTGAAAAATAG+AGG | + | chr3_1:70534875-70534894 | None:intergenic | 35.0% | |
| ! | CCTTTTCTTTGATTATCACG+TGG | + | chr3_1:70534892-70534911 | None:intergenic | 35.0% |
| CCACGTGATAATCAAAGAAA+AGG | - | chr3_1:70534889-70534908 | Msa0372220:intron | 35.0% | |
| ACACATGAGAATTACTTTCC+CGG | - | chr3_1:70535114-70535133 | Msa0372220:intron | 35.0% | |
| ! | ATTGTCTGCATTTTCTTTCC+CGG | + | chr3_1:70535136-70535155 | None:intergenic | 35.0% |
| CTCATTGAGGTATAACATTG+TGG | - | chr3_1:70535222-70535241 | Msa0372220:CDS | 35.0% | |
| TACTTAGACAGCAATGGAAA+GGG | + | chr3_1:70535457-70535476 | None:intergenic | 35.0% | |
| TTACTTAGACAGCAATGGAA+AGG | + | chr3_1:70535458-70535477 | None:intergenic | 35.0% | |
| ! | GTGTTTTACTTAGACAGCAA+TGG | + | chr3_1:70535463-70535482 | None:intergenic | 35.0% |
| TTTCTAATACACATGGACAG+AGG | - | chr3_1:70535580-70535599 | Msa0372220:intron | 35.0% | |
| AAGCATCATTTCAAGATACC+TGG | - | chr3_1:70535655-70535674 | Msa0372220:intron | 35.0% | |
| ATCATTTCAAGATACCTGGA+TGG | - | chr3_1:70535659-70535678 | Msa0372220:intron | 35.0% | |
| GTGCCTTCAAGATATAGTTA+AGG | + | chr3_1:70535962-70535981 | None:intergenic | 35.0% | |
| ACCTAACTTTCTTTACTTGC+AGG | + | chr3_1:70536218-70536237 | None:intergenic | 35.0% | |
| GAACATGTTAGTTGTAGACT+TGG | - | chr3_1:70536275-70536294 | Msa0372220:intron | 35.0% | |
| TTAGTTGTAGACTTGGAGAA+TGG | - | chr3_1:70536282-70536301 | Msa0372220:intron | 35.0% | |
| ATGCACCTCTCTAAATCAAA+TGG | + | chr3_1:70536360-70536379 | None:intergenic | 35.0% | |
| ! | TTTGATTTAGAGAGGTGCAT+TGG | - | chr3_1:70536360-70536379 | Msa0372220:intron | 35.0% |
| GGGTATATCTTAAATGTAGG+TGG | + | chr3_1:70536518-70536537 | None:intergenic | 35.0% | |
| GTTACATAGCAATCTTACCA+CGG | + | chr3_1:70536722-70536741 | None:intergenic | 35.0% | |
| !!! | GTTTTGGTTATTGAACAGGA+AGG | - | chr3_1:70536870-70536889 | Msa0372220:intron | 35.0% |
| AATTGCATTTACCTCCTCTA+AGG | + | chr3_1:70537212-70537231 | None:intergenic | 35.0% | |
| TTTCATCCTCAGTAACATAG+AGG | + | chr3_1:70537278-70537297 | None:intergenic | 35.0% | |
| ! | ATCATGATGATGTGTGTAGA+GGG | + | chr3_1:70537363-70537382 | None:intergenic | 35.0% |
| ! | TATCATGATGATGTGTGTAG+AGG | + | chr3_1:70537364-70537383 | None:intergenic | 35.0% |
| ! | GTAGATGCTGACTGTGTAAA+TGG | - | chr3_1:70530789-70530808 | Msa0372220:three_prime_UTR | 40.0% |
| CGTCACCATCAACAATGAAA+AGG | + | chr3_1:70530863-70530882 | None:intergenic | 40.0% | |
| TAGCCCATAAAACGTTGTGA+TGG | - | chr3_1:70530953-70530972 | Msa0372220:three_prime_UTR | 40.0% | |
| AGAAGAGGTGGAAGAATGTA+AGG | - | chr3_1:70531001-70531020 | Msa0372220:three_prime_UTR | 40.0% | |
| CTGTGTATGAACAAAACACG+TGG | + | chr3_1:70531178-70531197 | None:intergenic | 40.0% | |
| ! | TGCCATATTTGGAGTGATCA+TGG | - | chr3_1:70531333-70531352 | Msa0372220:intron | 40.0% |
| GTCCATGATCACTCCAAATA+TGG | + | chr3_1:70531338-70531357 | None:intergenic | 40.0% | |
| CACAAGTAAAGCGTGGTAAA+TGG | + | chr3_1:70531428-70531447 | None:intergenic | 40.0% | |
| ! | ATGGATTGAACTTCCTTCAC+CGG | + | chr3_1:70531476-70531495 | None:intergenic | 40.0% |
| TAGATGCAGAGTTCAGAACA+TGG | + | chr3_1:70531495-70531514 | None:intergenic | 40.0% | |
| GGAGGTGATGAAGATGTAAT+TGG | + | chr3_1:70531675-70531694 | None:intergenic | 40.0% | |
| AGAACAACAACTACCTCTTC+CGG | - | chr3_1:70531879-70531898 | Msa0372220:intron | 40.0% | |
| CAATTCGTCTTCCTCATTTC+AGG | - | chr3_1:70532028-70532047 | Msa0372220:intron | 40.0% | |
| ! | ATTCTTACTCAGGCACTGTT+TGG | - | chr3_1:70532078-70532097 | Msa0372220:intron | 40.0% |
| TAAGCTATCTTGGAGAGCTT+AGG | - | chr3_1:70532157-70532176 | Msa0372220:intron | 40.0% | |
| ACTTGTGAGACTGTTTGGAT+TGG | + | chr3_1:70532277-70532296 | None:intergenic | 40.0% | |
| CAAACACTTGTGAGACTGTT+TGG | + | chr3_1:70532282-70532301 | None:intergenic | 40.0% | |
| ! | TTGAGGACTAACTTGTCAGA+TGG | - | chr3_1:70532682-70532701 | Msa0372220:intron | 40.0% |
| ! | ATAATGGAAATTACGCCCTG+AGG | + | chr3_1:70532739-70532758 | None:intergenic | 40.0% |
| ACCAACATTGTATCTTTCGG+AGG | - | chr3_1:70532774-70532793 | Msa0372220:CDS | 40.0% | |
| AAGTTAGTCCTCGAATCACA+AGG | + | chr3_1:70533233-70533252 | None:intergenic | 40.0% | |
| ATGACCAACGCTGTATCTTT+CGG | - | chr3_1:70533328-70533347 | Msa0372220:intron | 40.0% | |
| GTATCTTTCGGTGGCTAATT+TGG | - | chr3_1:70533340-70533359 | Msa0372220:intron | 40.0% | |
| ACCAGACTCGTCCAAAAATA+TGG | - | chr3_1:70533415-70533434 | Msa0372220:CDS | 40.0% | |
| !! | ATTTTTCTTGGTGCAGGTAC+CGG | + | chr3_1:70533554-70533573 | None:intergenic | 40.0% |
| !! | ACTAGCATTTTTCTTGGTGC+AGG | + | chr3_1:70533560-70533579 | None:intergenic | 40.0% |
| ACAGGACACTCGAGAAATAT+AGG | + | chr3_1:70533670-70533689 | None:intergenic | 40.0% | |
| TGTTCTCCATGCTACATTTC+AGG | - | chr3_1:70533726-70533745 | Msa0372220:intron | 40.0% | |
| !! | TAGAAGAGGCACTCATGAAT+TGG | + | chr3_1:70533822-70533841 | None:intergenic | 40.0% |
| TACAGACTAGGAGTTAGAAG+AGG | + | chr3_1:70533836-70533855 | None:intergenic | 40.0% | |
| ACCTTCCTAGATAAAGAGAG+AGG | - | chr3_1:70534088-70534107 | Msa0372220:intron | 40.0% | |
| ATGTGCCTCTCTCTTTATCT+AGG | + | chr3_1:70534096-70534115 | None:intergenic | 40.0% | |
| ! | TAGATAAAGAGAGAGGCACA+TGG | - | chr3_1:70534095-70534114 | Msa0372220:intron | 40.0% |
| ! | AGATAAAGAGAGAGGCACAT+GGG | - | chr3_1:70534096-70534115 | Msa0372220:intron | 40.0% |
| ATCGAACTGATAACTGTTGC+AGG | - | chr3_1:70534492-70534511 | Msa0372220:intron | 40.0% | |
| TCTCGAAGATGATGACATAG+TGG | - | chr3_1:70534668-70534687 | Msa0372220:CDS | 40.0% | |
| AGGGGAAGATTAAACTCATG+TGG | + | chr3_1:70534735-70534754 | None:intergenic | 40.0% | |
| AGGTGGAAGGATCATATACA+TGG | + | chr3_1:70534855-70534874 | None:intergenic | 40.0% | |
| TATATCCCATTTGCCAGAGA+CGG | - | chr3_1:70534942-70534961 | Msa0372220:intron | 40.0% | |
| CACATGAGAATTACTTTCCC+GGG | - | chr3_1:70535115-70535134 | Msa0372220:intron | 40.0% | |
| ! | TTGTCTGCATTTTCTTTCCC+GGG | + | chr3_1:70535135-70535154 | None:intergenic | 40.0% |
| GGGAAAGAAAATGCAGACAA+TGG | - | chr3_1:70535135-70535154 | Msa0372220:intron | 40.0% | |
| AACACTTTCAGCGATAACAG+AGG | + | chr3_1:70535191-70535210 | None:intergenic | 40.0% | |
| ! | TCTGTTATCGCTGAAAGTGT+TGG | - | chr3_1:70535190-70535209 | Msa0372220:CDS | 40.0% |
| TTGGAGCACATAACTCATTG+AGG | - | chr3_1:70535209-70535228 | Msa0372220:CDS | 40.0% | |
| GGTATAACATTGTGGTTTCC+TGG | - | chr3_1:70535230-70535249 | Msa0372220:CDS | 40.0% | |
| TTCTCCAAAAAGTTGCAAGC+TGG | - | chr3_1:70535390-70535409 | Msa0372220:intron | 40.0% | |
| !!! | TTTCATTTTTTGGGGTTGGG+AGG | - | chr3_1:70535532-70535551 | Msa0372220:intron | 40.0% |
| AAACAATCAGCTTTCCATCC+AGG | + | chr3_1:70535676-70535695 | None:intergenic | 40.0% | |
| CTCATTTAGCAAGTATACCG+AGG | - | chr3_1:70535703-70535722 | Msa0372220:intron | 40.0% | |
| ACTCATGACCCTTGAAATCA+AGG | + | chr3_1:70535836-70535855 | None:intergenic | 40.0% | |
| GATTTCAAGGGTCATGAGTA+AGG | - | chr3_1:70535837-70535856 | Msa0372220:intron | 40.0% | |
| GCCTGCAAGTAAAGAAAGTT+AGG | - | chr3_1:70536214-70536233 | Msa0372220:intron | 40.0% | |
| ! | TTTAGAGAGGTGCATTGGAT+TGG | - | chr3_1:70536365-70536384 | Msa0372220:intron | 40.0% |
| ! | TTAGAGAGGTGCATTGGATT+GGG | - | chr3_1:70536366-70536385 | Msa0372220:intron | 40.0% |
| TCTCGTACAAGCTAAAGGAA+TGG | - | chr3_1:70536595-70536614 | Msa0372220:intron | 40.0% | |
| CTCGTACAAGCTAAAGGAAT+GGG | - | chr3_1:70536596-70536615 | Msa0372220:intron | 40.0% | |
| TCGTACAAGCTAAAGGAATG+GGG | - | chr3_1:70536597-70536616 | Msa0372220:intron | 40.0% | |
| TCAACATTGTCGCAAACTCT+TGG | + | chr3_1:70536665-70536684 | None:intergenic | 40.0% | |
| GACAATGTTGACCTTGAAGT+GGG | - | chr3_1:70536674-70536693 | Msa0372220:intron | 40.0% | |
| ACAATGTTGACCTTGAAGTG+GGG | - | chr3_1:70536675-70536694 | Msa0372220:intron | 40.0% | |
| AACAGGAAGGAAGTTCAAGT+GGG | - | chr3_1:70536883-70536902 | Msa0372220:intron | 40.0% | |
| TGACCACATGAATCAAACTG+GGG | + | chr3_1:70536953-70536972 | None:intergenic | 40.0% | |
| CTGACCACATGAATCAAACT+GGG | + | chr3_1:70536954-70536973 | None:intergenic | 40.0% | |
| TCTGACCACATGAATCAAAC+TGG | + | chr3_1:70536955-70536974 | None:intergenic | 40.0% | |
| TCGATAGTAAAAAAGGGGTG+TGG | - | chr3_1:70537170-70537189 | Msa0372220:intron | 40.0% | |
| ! | CGATAGTAAAAAAGGGGTGT+GGG | - | chr3_1:70537171-70537190 | Msa0372220:intron | 40.0% |
| TGCATTTCAATGGACCTTAG+AGG | - | chr3_1:70537195-70537214 | Msa0372220:intron | 40.0% | |
| ATTTCAATGGACCTTAGAGG+AGG | - | chr3_1:70537198-70537217 | Msa0372220:intron | 40.0% | |
| TCAGTAACATAGAGGCTTCA+AGG | + | chr3_1:70537270-70537289 | None:intergenic | 40.0% | |
| TTGAAGCCTCTATGTTACTG+AGG | - | chr3_1:70537269-70537288 | Msa0372220:CDS | 40.0% | |
| TGATGTTGAAACCGGAGTTG+TGG | - | chr3_1:70530928-70530947 | Msa0372220:three_prime_UTR | 45.0% | |
| ! | CCGCCATCACAACGTTTTAT+GGG | + | chr3_1:70530959-70530978 | None:intergenic | 45.0% |
| CCCATAAAACGTTGTGATGG+CGG | - | chr3_1:70530956-70530975 | Msa0372220:three_prime_UTR | 45.0% | |
| ! | ACCGCCATCACAACGTTTTA+TGG | + | chr3_1:70530960-70530979 | None:intergenic | 45.0% |
| GGTGTGTTAGAAAGAAGAGG+TGG | - | chr3_1:70530989-70531008 | Msa0372220:three_prime_UTR | 45.0% | |
| AGGAATGACAAGAGGAGAAG+AGG | - | chr3_1:70531021-70531040 | Msa0372220:three_prime_UTR | 45.0% | |
| AATGACAAGAGGAGAAGAGG+TGG | - | chr3_1:70531024-70531043 | Msa0372220:three_prime_UTR | 45.0% | |
| TAAAGCGTGGTAAATGGAGC+TGG | + | chr3_1:70531422-70531441 | None:intergenic | 45.0% | |
| TTTGTGGCACAAGTAAAGCG+TGG | + | chr3_1:70531435-70531454 | None:intergenic | 45.0% | |
| CTTTACTTGTGCCACAAAGC+TGG | - | chr3_1:70531437-70531456 | Msa0372220:CDS | 45.0% | |
| GTCAATACATGCCAGCTTTG+TGG | + | chr3_1:70531451-70531470 | None:intergenic | 45.0% | |
| GAAATGCTGTCTTCTGAGTG+TGG | + | chr3_1:70531630-70531649 | None:intergenic | 45.0% | |
| CACTCAGAAGACAGCATTTC+CGG | - | chr3_1:70531630-70531649 | Msa0372220:intron | 45.0% | |
| ACAAAACCACGCTACCAACA+AGG | - | chr3_1:70531762-70531781 | Msa0372220:intron | 45.0% | |
| TAAGCGTGAACGAACCTTGT+TGG | + | chr3_1:70531779-70531798 | None:intergenic | 45.0% | |
| AGATGAGGAGGTTGAAATGC+CGG | - | chr3_1:70532344-70532363 | Msa0372220:intron | 45.0% | |
| ! | AATGCATGTTTTGTGGCCTC+AGG | - | chr3_1:70532720-70532739 | Msa0372220:intron | 45.0% |
| ! | ATGCATGTTTTGTGGCCTCA+GGG | - | chr3_1:70532721-70532740 | Msa0372220:intron | 45.0% |
| GCCTCCGAAAGATACAATGT+TGG | + | chr3_1:70532778-70532797 | None:intergenic | 45.0% | |
| ! | GTATCTTTCGGAGGCTAGTT+TGG | - | chr3_1:70532783-70532802 | Msa0372220:CDS | 45.0% |
| TCAGAAGTTGCTCGAAGATG+AGG | - | chr3_1:70532891-70532910 | Msa0372220:intron | 45.0% | |
| AGATGAGGAGGTTGAAATGC+CGG | - | chr3_1:70532344-70532363 | Msa0372220:intron | 45.0% | |
| TGAAATGCCGGACTTCAATG+AGG | - | chr3_1:70532918-70532937 | Msa0372220:intron | 45.0% | |
| GAAATGCCGGACTTCAATGA+GGG | - | chr3_1:70532919-70532938 | Msa0372220:intron | 45.0% | |
| TTGTCACCCTCATTGAAGTC+CGG | + | chr3_1:70532928-70532947 | None:intergenic | 45.0% | |
| ACTTCAATGAGGGTGACAAC+CGG | - | chr3_1:70532929-70532948 | Msa0372220:CDS | 45.0% | |
| GGTGACAACCGGAATGAATT+GGG | - | chr3_1:70532940-70532959 | Msa0372220:CDS | 45.0% | |
| ! | TCGAGGACTAACTTGTCTGA+TGG | - | chr3_1:70533239-70533258 | Msa0372220:CDS | 45.0% |
| AATGCATGTATAGTGGCCTC+AGG | - | chr3_1:70533277-70533296 | Msa0372220:intron | 45.0% | |
| ATGCATGTATAGTGGCCTCA+GGG | - | chr3_1:70533278-70533297 | Msa0372220:intron | 45.0% | |
| ACAATGGAAATTACGCCCTG+AGG | + | chr3_1:70533296-70533315 | None:intergenic | 45.0% | |
| !!! | GCCATATTTTTGGACGAGTC+TGG | + | chr3_1:70533419-70533438 | None:intergenic | 45.0% |
| !! | TGCTTTTGAGAAGGTCGCAT+GGG | + | chr3_1:70533524-70533543 | None:intergenic | 45.0% |
| !! | TTGCTTTTGAGAAGGTCGCA+TGG | + | chr3_1:70533525-70533544 | None:intergenic | 45.0% |
| GCCTCTCTCTTTATCTAGGA+AGG | + | chr3_1:70534092-70534111 | None:intergenic | 45.0% | |
| ! | ATCTTGCTGTACGTGCAGTT+TGG | - | chr3_1:70534320-70534339 | Msa0372220:intron | 45.0% |
| TGATAACTGTTGCAGGCATC+TGG | - | chr3_1:70534499-70534518 | Msa0372220:intron | 45.0% | |
| ! | AGGCATCTGGAACAAAGCTA+AGG | - | chr3_1:70534512-70534531 | Msa0372220:intron | 45.0% |
| ACACATAACTATGGGCACAC+TGG | - | chr3_1:70534561-70534580 | Msa0372220:intron | 45.0% | |
| AGGCCTTCTGCAAGTTTAGA+TGG | - | chr3_1:70534639-70534658 | Msa0372220:CDS | 45.0% | |
| AGCTTCAGTTTCAGAAGGCT+CGG | + | chr3_1:70534709-70534728 | None:intergenic | 45.0% | |
| CTGGATAAGACTGATCTGGT+GGG | - | chr3_1:70534780-70534799 | Msa0372220:intron | 45.0% | |
| AACAACCGTCTCTGGCAAAT+GGG | + | chr3_1:70534950-70534969 | None:intergenic | 45.0% | |
| CGGATCATCAAGTGACAATG+AGG | - | chr3_1:70535002-70535021 | Msa0372220:intron | 45.0% | |
| GCAGGCGATGCAAAAAGAAA+AGG | - | chr3_1:70535353-70535372 | Msa0372220:intron | 45.0% | |
| ! | AGCTCCAGCTTGCAACTTTT+TGG | + | chr3_1:70535397-70535416 | None:intergenic | 45.0% |
| ! | GAAGCATTTCGTGCAACCTA+TGG | + | chr3_1:70535744-70535763 | None:intergenic | 45.0% |
| TATCCTAGAATGCACCCTCA+AGG | - | chr3_1:70535810-70535829 | Msa0372220:intron | 45.0% | |
| CCTTGAAATCAAGGCCTTGA+GGG | + | chr3_1:70535827-70535846 | None:intergenic | 45.0% | |
| CCTCAAGGCCTTGATTTCAA+GGG | - | chr3_1:70535825-70535844 | Msa0372220:intron | 45.0% | |
| TTGCAGGCTGCAGCTTATAA+TGG | + | chr3_1:70536202-70536221 | None:intergenic | 45.0% | |
| TGGAGAATGGAGACTCATGA+TGG | - | chr3_1:70536295-70536314 | Msa0372220:intron | 45.0% | |
| CAAGCTAAAGGAATGGGGTT+TGG | - | chr3_1:70536602-70536621 | Msa0372220:intron | 45.0% | |
| CGACAATGTTGACCTTGAAG+TGG | - | chr3_1:70536673-70536692 | Msa0372220:intron | 45.0% | |
| CATAGCAATCTTACCACGGA+GGG | + | chr3_1:70536718-70536737 | None:intergenic | 45.0% | |
| ACATAGCAATCTTACCACGG+AGG | + | chr3_1:70536719-70536738 | None:intergenic | 45.0% | |
| GAACAGGAAGGAAGTTCAAG+TGG | - | chr3_1:70536882-70536901 | Msa0372220:intron | 45.0% | |
| GACCACATGAATCAAACTGG+GGG | + | chr3_1:70536952-70536971 | None:intergenic | 45.0% | |
| !! | TTAAATCTATAATTAAAAAT+GGG | + | chr3_1:70531369-70531388 | None:intergenic | 5.0% |
| !! | TTTAAATCTATAATTAAAAA+TGG | + | chr3_1:70531370-70531389 | None:intergenic | 5.0% |
| !! | AATGTGGTGATGGTGGTCTC+TGG | - | chr3_1:70530886-70530905 | Msa0372220:three_prime_UTR | 50.0% |
| !! | AAACGTTGTGATGGCGGTGT+TGG | - | chr3_1:70530962-70530981 | Msa0372220:three_prime_UTR | 50.0% |
| !! | TGTGATGGCGGTGTTGGAAT+TGG | - | chr3_1:70530968-70530987 | Msa0372220:three_prime_UTR | 50.0% |
| GATTGAACTTCCTTCACCGG+CGG | + | chr3_1:70531473-70531492 | None:intergenic | 50.0% | |
| CAGTAGATTTACGTACGCGG+AGG | + | chr3_1:70531529-70531548 | None:intergenic | 50.0% | |
| !! | AACGAACCTTGTTGGTAGCG+TGG | + | chr3_1:70531771-70531790 | None:intergenic | 50.0% |
| AAATCTAATCGCGCCGGAAG+AGG | + | chr3_1:70531895-70531914 | None:intergenic | 50.0% | |
| TCAGAAGTCGCTCGAAGATG+AGG | - | chr3_1:70532329-70532348 | Msa0372220:intron | 50.0% | |
| TGAAATGCCGGACTTCAACG+AGG | - | chr3_1:70532356-70532375 | Msa0372220:intron | 50.0% | |
| GAAATGCCGGACTTCAACGA+GGG | - | chr3_1:70532357-70532376 | Msa0372220:intron | 50.0% | |
| TTGTCACCCTCGTTGAAGTC+CGG | + | chr3_1:70532366-70532385 | None:intergenic | 50.0% | |
| GGTGACAACCGCGATGTATT+GGG | - | chr3_1:70532378-70532397 | Msa0372220:intron | 50.0% | |
| GAAGTTGCTCGAAGATGAGG+AGG | - | chr3_1:70532894-70532913 | Msa0372220:intron | 50.0% | |
| GGGTGACAACCGGAATGAAT+TGG | - | chr3_1:70532939-70532958 | Msa0372220:CDS | 50.0% | |
| CAACCGGAATGAATTGGGAG+AGG | - | chr3_1:70532945-70532964 | Msa0372220:CDS | 50.0% | |
| CCACCTCTCCCAATTCATTC+CGG | + | chr3_1:70532951-70532970 | None:intergenic | 50.0% | |
| ACCAACGCTGTATCTTTCGG+TGG | - | chr3_1:70533331-70533350 | Msa0372220:intron | 50.0% | |
| GGACGAGCTTCAGTTTCAGA+AGG | + | chr3_1:70534714-70534733 | None:intergenic | 50.0% | |
| ! | CCAGATCAGTCTTATCCAGG+AGG | + | chr3_1:70534779-70534798 | None:intergenic | 50.0% |
| CCTCCTGGATAAGACTGATC+TGG | - | chr3_1:70534776-70534795 | Msa0372220:intron | 50.0% | |
| ! | CCACCAGATCAGTCTTATCC+AGG | + | chr3_1:70534782-70534801 | None:intergenic | 50.0% |
| CCTGGATAAGACTGATCTGG+TGG | - | chr3_1:70534779-70534798 | Msa0372220:intron | 50.0% | |
| GATAAGACTGATCTGGTGGG+TGG | - | chr3_1:70534783-70534802 | Msa0372220:intron | 50.0% | |
| CAACAACCGTCTCTGGCAAA+TGG | + | chr3_1:70534951-70534970 | None:intergenic | 50.0% | |
| TCACTGTCAACAACCGTCTC+TGG | + | chr3_1:70534958-70534977 | None:intergenic | 50.0% | |
| ATCCGCTATCCACAGGTTCA+GGG | + | chr3_1:70534987-70535006 | None:intergenic | 50.0% | |
| ! | CTTGATGATCCGCTATCCAC+AGG | + | chr3_1:70534994-70535013 | None:intergenic | 50.0% |
| CCCTCAAGGCCTTGATTTCA+AGG | - | chr3_1:70535824-70535843 | Msa0372220:intron | 50.0% | |
| CCCTTGAAATCAAGGCCTTG+AGG | + | chr3_1:70535828-70535847 | None:intergenic | 50.0% | |
| GCTAAAGGAATGGGGTTTGG+TGG | - | chr3_1:70536605-70536624 | Msa0372220:intron | 50.0% | |
| GGATTAAGCTCCCCACTTCA+AGG | + | chr3_1:70536688-70536707 | None:intergenic | 50.0% | |
| TAATCCGTATTCACCCTCCG+TGG | - | chr3_1:70536702-70536721 | Msa0372220:intron | 50.0% | |
| CTTACCACGGAGGGTGAATA+CGG | + | chr3_1:70536709-70536728 | None:intergenic | 50.0% | |
| CACCCCCAGTTTGATTCATG+TGG | - | chr3_1:70536947-70536966 | Msa0372220:intron | 50.0% | |
| ! | GGGTGTGGGTTGCATTTCAA+TGG | - | chr3_1:70537185-70537204 | Msa0372220:intron | 50.0% |
| GGTCGTAATCATGCTGCTGA+TGG | - | chr3_1:70537315-70537334 | Msa0372220:CDS | 50.0% | |
| !! | GTTGATGGTGACGGCGAATG+TGG | - | chr3_1:70530870-70530889 | Msa0372220:three_prime_UTR | 55.0% |
| ! | TATGGGCTACGCCACAACTC+CGG | + | chr3_1:70530942-70530961 | None:intergenic | 55.0% |
| ! | AGCTGGCATGTATTGACCGC+CGG | - | chr3_1:70531454-70531473 | Msa0372220:CDS | 55.0% |
| ! | CATGTATTGACCGCCGGTGA+AGG | - | chr3_1:70531460-70531479 | Msa0372220:CDS | 55.0% |
| GCGTAATGGTCGTCGTCATC+TGG | + | chr3_1:70531727-70531746 | None:intergenic | 55.0% | |
| GAAGTCGCTCGAAGATGAGG+AGG | - | chr3_1:70532332-70532351 | Msa0372220:intron | 55.0% | |
| GGGTGACAACCGCGATGTAT+TGG | - | chr3_1:70532377-70532396 | Msa0372220:intron | 55.0% | |
| CAACCGCGATGTATTGGGAG+AGG | - | chr3_1:70532383-70532402 | Msa0372220:intron | 55.0% | |
| CCACCTCTCCCAATACATCG+CGG | + | chr3_1:70532389-70532408 | None:intergenic | 55.0% | |
| ! | GGGAGAGGTGGTTGCTGATT+CGG | - | chr3_1:70532398-70532417 | Msa0372220:intron | 55.0% |
| CCGGAATGAATTGGGAGAGG+TGG | - | chr3_1:70532948-70532967 | Msa0372220:CDS | 55.0% | |
| ! | GGGAGAGGTGGTTGCTGATT+CGG | - | chr3_1:70532398-70532417 | Msa0372220:intron | 55.0% |
| GCCACCGAAAGATACAGCGT+TGG | + | chr3_1:70533335-70533354 | None:intergenic | 55.0% | |
| TTTGGACGAGTCTGGTCGAG+AGG | + | chr3_1:70533411-70533430 | None:intergenic | 55.0% | |
| TCCCCTGAACCTGTGGATAG+CGG | - | chr3_1:70534982-70535001 | Msa0372220:intron | 55.0% | |
| TCCGCTATCCACAGGTTCAG+GGG | + | chr3_1:70534986-70535005 | None:intergenic | 55.0% | |
| GATCCGCTATCCACAGGTTC+AGG | + | chr3_1:70534988-70535007 | None:intergenic | 55.0% | |
| CAAGCTGGAGCTAGACCAGA+TGG | - | chr3_1:70535405-70535424 | Msa0372220:intron | 55.0% | |
| ! | AGGCCTTGAGGGTGCATTCT+AGG | + | chr3_1:70535816-70535835 | None:intergenic | 55.0% |
| !! | GGGTTTGGTGGCAGCAAAGA+TGG | - | chr3_1:70536617-70536636 | Msa0372220:intron | 55.0% |
| ! | GGTGACGGCGAATGTGGTGA+TGG | - | chr3_1:70530876-70530895 | Msa0372220:three_prime_UTR | 60.0% |
| !! | GACGGCGAATGTGGTGATGG+TGG | - | chr3_1:70530879-70530898 | Msa0372220:three_prime_UTR | 60.0% |
| CCGCGATGTATTGGGAGAGG+TGG | - | chr3_1:70532386-70532405 | Msa0372220:intron | 60.0% | |
| TGACGACTCCCCTGAACCTG+TGG | - | chr3_1:70534975-70534994 | Msa0372220:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 70530771 | 70537386 | 70530771 | ID=Msa0372220;Name=Msa0372220 |
| chr3_1 | mRNA | 70530771 | 70537386 | 70530771 | ID=Msa0372220-mRNA-1;Parent=Msa0372220;Name=Msa0372220-mRNA-1;_AED=0.20;_eAED=0.17;_QI=0|0.61|0.64|0.85|0.69|0.78|14|426|572 |
| chr3_1 | exon | 70530771 | 70531269 | 70530771 | ID=Msa0372220-mRNA-1:exon:15394;Parent=Msa0372220-mRNA-1 |
| chr3_1 | exon | 70531434 | 70531567 | 70531434 | ID=Msa0372220-mRNA-1:exon:15393;Parent=Msa0372220-mRNA-1 |
| chr3_1 | exon | 70532433 | 70532524 | 70532433 | ID=Msa0372220-mRNA-1:exon:15392;Parent=Msa0372220-mRNA-1 |
| chr3_1 | exon | 70532731 | 70532828 | 70532731 | ID=Msa0372220-mRNA-1:exon:15391;Parent=Msa0372220-mRNA-1 |
| chr3_1 | exon | 70532927 | 70533054 | 70532927 | ID=Msa0372220-mRNA-1:exon:15390;Parent=Msa0372220-mRNA-1 |
| chr3_1 | exon | 70533134 | 70533271 | 70533134 | ID=Msa0372220-mRNA-1:exon:15389;Parent=Msa0372220-mRNA-1 |
| chr3_1 | exon | 70533360 | 70533643 | 70533360 | ID=Msa0372220-mRNA-1:exon:15388;Parent=Msa0372220-mRNA-1 |
| chr3_1 | exon | 70533830 | 70533872 | 70533830 | ID=Msa0372220-mRNA-1:exon:15387;Parent=Msa0372220-mRNA-1 |
| chr3_1 | exon | 70534572 | 70534760 | 70534572 | ID=Msa0372220-mRNA-1:exon:15386;Parent=Msa0372220-mRNA-1 |
| chr3_1 | exon | 70535146 | 70535262 | 70535146 | ID=Msa0372220-mRNA-1:exon:15385;Parent=Msa0372220-mRNA-1 |
| chr3_1 | exon | 70535708 | 70535754 | 70535708 | ID=Msa0372220-mRNA-1:exon:15384;Parent=Msa0372220-mRNA-1 |
| chr3_1 | exon | 70536235 | 70536286 | 70536235 | ID=Msa0372220-mRNA-1:exon:15383;Parent=Msa0372220-mRNA-1 |
| chr3_1 | exon | 70536374 | 70536536 | 70536374 | ID=Msa0372220-mRNA-1:exon:15382;Parent=Msa0372220-mRNA-1 |
| chr3_1 | exon | 70537226 | 70537386 | 70537226 | ID=Msa0372220-mRNA-1:exon:15381;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70537226 | 70537386 | 70537226 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70536374 | 70536536 | 70536374 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70536235 | 70536286 | 70536235 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70535708 | 70535754 | 70535708 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70535146 | 70535262 | 70535146 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70534572 | 70534760 | 70534572 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70533830 | 70533872 | 70533830 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70533360 | 70533643 | 70533360 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70533134 | 70533271 | 70533134 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70532927 | 70533054 | 70532927 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70532731 | 70532828 | 70532731 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70532433 | 70532524 | 70532433 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70531434 | 70531567 | 70531434 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | CDS | 70531197 | 70531269 | 70531197 | ID=Msa0372220-mRNA-1:cds;Parent=Msa0372220-mRNA-1 |
| chr3_1 | three_prime_UTR | 70530771 | 70531196 | 70530771 | ID=Msa0372220-mRNA-1:three_prime_utr;Parent=Msa0372220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
