AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1308380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308380 MtrunA17_Chr8g0335011 87.791 516 46 1 28 543 1 499 0.0 927
Msa1308380 MtrunA17_Chr8g0334971 50.398 502 179 9 46 542 9 445 2.08e-161 466
Msa1308380 MtrunA17_Chr8g0335061 49.603 504 179 11 46 542 9 444 7.84e-158 457
Msa1308380 MtrunA17_Chr8g0334951 46.263 495 181 13 46 535 11 425 1.50e-133 395
Msa1308380 MtrunA17_Chr8g0334911 46.245 506 188 13 39 539 4 430 4.52e-132 391
Msa1308380 MtrunA17_Chr8g0335021 45.399 489 189 13 63 537 27 451 2.61e-127 380
Msa1308380 MtrunA17_Chr8g0335071 42.720 522 222 12 28 538 1 456 6.41e-122 366
Msa1308380 MtrunA17_Chr3g0118601 33.468 496 247 16 44 530 20 441 5.21e-64 216
Msa1308380 MtrunA17_Chr6g0452551 31.557 488 220 17 59 535 21 405 1.06e-61 208
Msa1308380 MtrunA17_Chr6g0452531 30.346 491 226 16 49 524 7 396 1.48e-59 203
Msa1308380 MtrunA17_Chr6g0452611 30.297 472 218 14 63 524 24 394 1.81e-57 197
Msa1308380 MtrunA17_Chr6g0452501 30.947 475 226 14 56 524 18 396 1.33e-56 195
Msa1308380 MtrunA17_Chr6g0452601 29.555 494 236 15 52 530 14 410 9.40e-56 193
Msa1308380 MtrunA17_Chr6g0457371 30.538 465 218 14 65 524 27 391 4.25e-52 183
Msa1308380 MtrunA17_Chr6g0452561 29.447 506 238 18 52 535 14 422 3.62e-51 181
Msa1308380 MtrunA17_Chr3g0138001 30.737 475 224 14 61 523 24 405 7.79e-51 182
Msa1308380 MtrunA17_Chr8g0334981 95.181 83 4 0 460 542 1 83 1.22e-50 168
Msa1308380 MtrunA17_Chr6g0452591 29.424 486 229 16 62 535 54 437 1.66e-48 174
Msa1308380 MtrunA17_Chr8g0335001 84.043 94 15 0 21 114 13 106 2.34e-48 163
Msa1308380 MtrunA17_Chr6g0452161 29.412 493 236 16 49 523 7 405 3.03e-48 173
Msa1308380 MtrunA17_Chr2g0297831 27.557 479 263 14 56 532 61 457 1.77e-43 161
Msa1308380 MtrunA17_Chr2g0300311 27.331 472 261 13 63 532 50 441 6.25e-42 157
Msa1308380 MtrunA17_Chr2g0296801 27.189 434 219 9 100 530 1 340 3.93e-38 143
Msa1308380 MtrunA17_Chr7g0265891 26.030 461 249 15 63 515 51 427 7.03e-36 139
Msa1308380 MtrunA17_Chr5g0439721 25.684 475 272 10 64 535 33 429 3.37e-34 134
Msa1308380 MtrunA17_Chr5g0401791 27.311 476 258 14 59 515 97 503 4.93e-32 129
Msa1308380 MtrunA17_Chr6g0452571 28.889 405 181 14 136 530 33 340 8.62e-32 125
Msa1308380 MtrunA17_Chr5g0439641 25.000 472 277 12 64 527 33 435 6.45e-31 125
Msa1308380 MtrunA17_Chr7g0218171 34.211 190 101 3 343 530 122 289 1.35e-25 107
Msa1308380 MtrunA17_Chr7g0238231 24.540 489 290 15 73 530 39 479 2.35e-23 103
Msa1308380 MtrunA17_Chr7g0238101 22.481 516 274 16 65 530 29 468 4.57e-22 99.4
Msa1308380 MtrunA17_Chr6g0452541 30.698 215 118 5 316 523 29 219 9.46e-22 94.4
Msa1308380 MtrunA17_Chr7g0238211 30.814 172 99 2 345 515 5 157 9.28e-20 87.4
Msa1308380 MtrunA17_Chr7g0238241 22.934 484 270 16 65 515 28 441 1.92e-18 88.2
Msa1308380 MtrunA17_Chr5g0439661 30.939 181 103 4 64 240 29 191 6.08e-18 82.4
Msa1308380 MtrunA17_Chr7g0238091 28.877 187 113 2 345 530 41 208 2.81e-17 80.9
Msa1308380 MtrunA17_Chr7g0238131 23.617 470 281 14 85 534 1 412 3.25e-17 84.0
Msa1308380 MtrunA17_Chr7g0238081 30.409 171 99 3 345 514 5 156 9.08e-17 78.6
Msa1308380 MtrunA17_Chr7g0238171 24.852 507 303 17 67 530 37 508 9.68e-17 83.2
Msa1308380 MtrunA17_Chr5g0440401 24.378 201 128 2 343 542 41 218 2.19e-15 75.5
Msa1308380 MtrunA17_Chr7g0238051 32.394 142 95 1 390 530 213 354 2.81e-15 77.8
Msa1308380 MtrunA17_Chr7g0238191 22.979 470 260 14 65 515 27 413 3.89e-15 77.8
Msa1308380 MtrunA17_Chr4g0002861 31.176 170 104 4 63 232 42 198 6.45e-15 77.8
Msa1308380 MtrunA17_Chr4g0002861 27.841 176 103 4 342 516 376 528 7.03e-11 64.7
Msa1308380 MtrunA17_Chr7g0238511 31.333 150 92 3 394 542 288 427 6.97e-15 77.0
Msa1308380 MtrunA17_Chr5g0439681 28.108 185 107 4 345 527 136 296 7.63e-15 75.9
Msa1308380 MtrunA17_Chr7g0238111 33.803 142 90 3 394 532 292 432 8.19e-15 76.6
Msa1308380 MtrunA17_Chr7g0232521 32.520 123 82 1 394 515 72 194 2.53e-14 72.4
Msa1308380 MtrunA17_Chr2g0297821 26.984 189 118 3 346 532 4 174 2.95e-14 71.6
Msa1308380 MtrunA17_Chr4g0002911 31.953 169 101 4 64 232 43 197 6.90e-14 74.3
Msa1308380 MtrunA17_Chr4g0002911 29.851 134 93 1 400 532 409 542 4.11e-11 65.5
Msa1308380 MtrunA17_Chr4g0002901 27.895 190 124 4 63 252 42 218 1.03e-13 73.9
Msa1308380 MtrunA17_Chr4g0002901 29.104 134 94 1 400 532 411 544 1.00e-11 67.4
Msa1308380 MtrunA17_Chr8g0354591 31.788 151 89 2 394 530 299 449 2.05e-13 72.4
Msa1308380 MtrunA17_Chr7g0238181 32.639 144 84 4 394 536 215 346 2.85e-13 71.2
Msa1308380 MtrunA17_Chr7g0220521 28.788 198 126 6 31 227 9 192 2.44e-12 69.3
Msa1308380 MtrunA17_Chr7g0220521 30.075 133 91 2 398 529 399 530 3.10e-11 65.9
Msa1308380 MtrunA17_Chr7g0242011 26.522 230 144 9 24 245 21 233 2.76e-12 69.3
Msa1308380 MtrunA17_Chr7g0238281 31.288 163 99 4 354 515 7 157 4.74e-12 65.1
Msa1308380 MtrunA17_Chr7g0238141 24.249 466 248 18 73 515 38 421 9.19e-12 67.4
Msa1308380 MtrunA17_Chr6g0452511 41.270 63 37 0 416 478 1 63 1.79e-11 60.5
Msa1308380 MtrunA17_Chr3g0107251 27.320 194 122 6 64 257 31 205 2.46e-11 66.2
Msa1308380 MtrunA17_Chr7g0241951 27.273 176 114 3 64 236 29 193 4.69e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308380 AT2G44930.1 30.162 494 239 9 63 535 84 492 3.12e-55 194
Msa1308380 AT3G60470.1 29.870 539 269 15 65 535 34 531 1.50e-54 193
Msa1308380 AT2G28580.6 28.921 491 244 10 63 535 41 444 9.88e-52 184
Msa1308380 AT2G28580.1 28.803 493 242 11 63 535 109 512 2.08e-51 184
Msa1308380 AT2G28580.2 28.803 493 242 11 63 535 123 526 3.75e-51 184
Msa1308380 AT2G28580.5 29.046 482 238 10 63 535 109 495 8.00e-51 182
Msa1308380 AT2G28580.4 29.046 482 238 10 63 535 123 509 9.99e-51 182
Msa1308380 AT4G31980.1 27.660 470 231 12 63 523 293 662 2.25e-46 172
Msa1308380 AT5G11290.2 25.311 482 266 14 51 530 22 411 1.23e-39 149
Msa1308380 AT3G50150.1 27.754 472 269 11 65 532 92 495 6.67e-39 149
Msa1308380 AT1G67150.4 27.178 482 246 12 62 530 5 394 7.12e-39 147
Msa1308380 AT1G67150.1 27.178 482 246 12 62 530 5 394 7.12e-39 147
Msa1308380 AT2G36430.1 25.055 455 259 11 63 515 45 419 3.37e-38 146
Msa1308380 AT1G67150.2 26.955 486 246 12 62 530 5 398 3.60e-38 145
Msa1308380 AT3G50170.1 25.382 524 310 12 24 530 64 523 7.86e-38 147
Msa1308380 AT3G47250.3 26.176 489 273 13 54 530 52 464 1.51e-36 142
Msa1308380 AT3G47250.2 26.176 489 273 13 54 530 52 464 1.51e-36 142
Msa1308380 AT3G47250.1 26.176 489 273 13 54 530 52 464 1.51e-36 142
Msa1308380 AT3G47210.1 27.536 483 234 13 27 494 64 445 1.29e-35 139
Msa1308380 AT3G50140.1 25.833 480 275 13 65 532 115 525 1.21e-33 134
Msa1308380 AT3G50120.1 26.383 470 283 12 65 530 105 515 8.43e-33 132
Msa1308380 AT2G28580.3 27.488 422 197 11 63 464 123 455 1.15e-32 130
Msa1308380 AT3G50130.1 26.593 455 268 13 65 515 141 533 6.08e-31 127
Msa1308380 AT3G50180.1 25.667 487 259 16 59 530 174 572 1.26e-28 120
Msa1308380 AT3G47200.1 25.470 479 261 13 52 515 35 432 2.48e-27 115
Msa1308380 AT3G47200.2 25.470 479 261 13 52 515 35 432 2.48e-27 115
Msa1308380 AT5G22540.1 23.226 465 257 13 63 515 31 407 1.62e-25 109
Msa1308380 AT3G44710.1 24.280 486 306 14 63 530 47 488 6.20e-25 108
Msa1308380 AT3G50190.1 24.000 475 257 13 65 530 98 477 8.67e-23 102
Msa1308380 AT5G11290.1 22.864 433 241 14 100 530 1 342 1.45e-22 99.8
Msa1308380 AT3G50170.2 28.767 219 126 5 24 232 64 262 4.81e-20 93.2
Msa1308380 AT1G65985.1 34.054 185 79 4 65 231 16 175 4.97e-20 93.6
Msa1308380 AT1G65985.1 37.903 124 76 1 395 517 304 427 2.37e-16 82.0
Msa1308380 AT1G65985.2 34.054 185 79 4 65 231 16 175 4.97e-20 93.6
Msa1308380 AT1G65985.2 37.903 124 76 1 395 517 304 427 2.37e-16 82.0
Msa1308380 AT5G22550.2 31.579 209 119 8 29 233 9 197 1.76e-19 92.0
Msa1308380 AT3G50160.1 31.285 179 103 4 59 237 100 258 2.53e-18 88.6
Msa1308380 AT3G50160.1 27.679 224 133 3 313 530 285 485 1.29e-16 83.2
Msa1308380 AT1G67150.3 29.947 187 107 3 345 530 188 351 3.02e-18 87.0
Msa1308380 AT1G67150.3 31.694 183 94 5 62 234 5 166 3.39e-15 77.8
Msa1308380 AT3G50150.2 31.429 175 99 4 65 237 92 247 1.35e-16 82.8
Msa1308380 AT3G50140.2 30.952 168 96 4 65 232 115 262 1.02e-15 79.7
Msa1308380 AT5G22560.1 26.882 186 103 4 63 234 47 213 3.43e-15 79.0
Msa1308380 AT3G50190.4 27.717 184 110 5 65 248 98 258 1.06e-12 70.1
Msa1308380 AT3G50190.3 27.717 184 110 5 65 248 98 258 1.06e-12 70.1
Msa1308380 AT3G02645.1 32.203 118 79 1 400 516 380 497 1.08e-12 70.9
Msa1308380 AT3G50190.2 27.717 184 110 5 65 248 98 258 1.21e-12 69.7
Msa1308380 AT3G44700.1 26.389 144 99 4 32 170 16 157 9.01e-11 62.4

Find 132 sgRNAs with CRISPR-Local

Find 605 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATTCCTATGTTTATTT+TGG 0.091254 8_4:-4650542 Msa1308380:five_prime_UTR
ATAAGCATTATCAGAATATT+TGG 0.154201 8_4:-4639801 Msa1308380:CDS
CTTGATACTGACATTGTTCT+AGG 0.157660 8_4:+4640022 None:intergenic
ATTAACTTTGTTACTGTTCT+TGG 0.162375 8_4:+4640246 None:intergenic
TCCAAGAGAAATTCAAATTA+AGG 0.174503 8_4:-4650320 Msa1308380:five_prime_UTR
TGAATTATATTATTAGTTTC+TGG 0.221830 8_4:-4649587 Msa1308380:CDS
AACATAGGCTCAATGATTTC+TGG 0.230505 8_4:+4650985 None:intergenic
TAACTGGTGGAAACATTATA+TGG 0.234450 8_4:-4649801 Msa1308380:five_prime_UTR
CTGCTAAACTTAACTCTTCT+AGG 0.239207 8_4:+4641114 None:intergenic
AAGAGAAATTTGTGTTACTA+TGG 0.254918 8_4:-4651049 Msa1308380:five_prime_UTR
TCATGTGCATAAACCATTCT+AGG 0.259915 8_4:-4651622 Msa1308380:intron
GAATTGGCAACATTGGTTAA+TGG 0.296171 8_4:-4649896 Msa1308380:five_prime_UTR
AGTACATATTCTGGTCTAAA+AGG 0.297271 8_4:+4650271 None:intergenic
TGTACGAATTAAAGAATAAA+TGG 0.302767 8_4:-4639519 Msa1308380:three_prime_UTR
GCTGTTCTTAGTACATATTC+TGG 0.309895 8_4:+4650262 None:intergenic
CTGCATGACTTCCAAGTTCA+TGG 0.314386 8_4:+4649918 None:intergenic
ATATTTATTCTATAAGAAAT+AGG 0.318376 8_4:-4651666 Msa1308380:five_prime_UTR
ACCATTTCAAAGCGCGTCTA+AGG 0.318480 8_4:-4640101 Msa1308380:CDS
TGAATGAACATTACAATAAC+TGG 0.320007 8_4:-4649817 Msa1308380:five_prime_UTR
ACGTGAAACTAAGCTTGTTT+TGG 0.326591 8_4:-4640481 Msa1308380:CDS
GAAACATAATTGCATATATA+AGG 0.329067 8_4:+4639994 None:intergenic
GACATTGTTCGAACGCAATT+AGG 0.332788 8_4:+4650044 None:intergenic
TGTTTCTCTTGATTAAGTTC+TGG 0.332904 8_4:+4650856 None:intergenic
ATCCTGGCAAAGTTCTTGTT+TGG 0.335574 8_4:+4650717 None:intergenic
CTAATAAGATACAGTATGTT+TGG 0.341574 8_4:+4649619 None:intergenic
GACTTTGTAGTTCTTGATCA+TGG 0.348123 8_4:+4640911 None:intergenic
AAGCAACAGAATGTGTTCTT+AGG 0.348136 8_4:-4650069 Msa1308380:five_prime_UTR
TCTTTATTTCCAAGGTGAAT+TGG 0.350401 8_4:+4641011 None:intergenic
ACACCAAAGTTTATCTCAAT+TGG 0.352179 8_4:-4650898 Msa1308380:five_prime_UTR
ATCAAATCAGTGAAATGTTT+AGG 0.353279 8_4:+4640333 None:intergenic
TTACCTTCCAGCTGATTTAA+CGG 0.361070 8_4:-4640301 Msa1308380:CDS
CCAAGAGAAATTCAAATTAA+GGG 0.364809 8_4:-4650319 Msa1308380:five_prime_UTR
CCCTTAATTTGAATTTCTCT+TGG 0.375221 8_4:+4650319 None:intergenic
TGTAATGTTAACATGATCAT+TGG 0.383864 8_4:-4649552 Msa1308380:CDS
AAATAAACAAACTTTAGCTT+TGG 0.384668 8_4:-4650794 Msa1308380:five_prime_UTR
TTGTTATGGAAAGATCATTA+AGG 0.389525 8_4:-4649843 Msa1308380:five_prime_UTR
AACATTTCACTGATTTGATA+AGG 0.390830 8_4:-4640329 Msa1308380:CDS
ACTCCTCAATTAATCTCAAT+TGG 0.392658 8_4:-4641035 Msa1308380:CDS
GTAACAAAGTTAATAGATTC+TGG 0.396787 8_4:-4640237 Msa1308380:CDS
AAGAAACCGTTCATGGAAAT+CGG 0.400354 8_4:-4640766 Msa1308380:CDS
GAATGGTTGCAATAGCAATA+AGG 0.400363 8_4:-4650485 Msa1308380:five_prime_UTR
GAAGTGGCAGTGCTTGTTAA+TGG 0.401978 8_4:-4639883 Msa1308380:CDS
ACTTGGAAGTCATGCAGAAT+TGG 0.403752 8_4:-4649912 Msa1308380:five_prime_UTR
ATCTAATCAAATCAGTGAAA+TGG 0.406351 8_4:+4650353 None:intergenic
ATAGACGCTCATAGAAGAAA+TGG 0.406927 8_4:+4640952 None:intergenic
AAATAAATAATTACCTAGAA+TGG 0.410889 8_4:+4651609 None:intergenic
TCCTTAGACGCGCTTTGAAA+TGG 0.415205 8_4:+4640100 None:intergenic
ACAAGTTGATGTTGATTTGT+TGG 0.429548 8_4:-4639947 Msa1308380:CDS
TCTAAATCCGTTAAATCAGC+TGG 0.442093 8_4:+4640294 None:intergenic
ACATGAAGATGTTGAGTTGT+TGG 0.443426 8_4:-4649960 Msa1308380:five_prime_UTR
AGCAATAACCATAGGTTTCA+AGG 0.443493 8_4:-4640357 Msa1308380:CDS
GGACCAATTGAGATAAACTT+TGG 0.444411 8_4:+4650895 None:intergenic
CTATAAGAAATAGGTAGGTT+TGG 0.446280 8_4:-4651657 Msa1308380:five_prime_UTR
ATTTCATGTTTACAACATCA+TGG 0.446527 8_4:-4650606 Msa1308380:five_prime_UTR
CAGAGAAAATAACTCAGAAA+TGG 0.447228 8_4:+4640156 None:intergenic
AATCAACATCAACTTGTGTA+TGG 0.449318 8_4:+4639953 None:intergenic
ATCTGAAACTGAATATGAAA+TGG 0.454211 8_4:-4641162 Msa1308380:CDS
GTTTAGGACCTTGAAACCTA+TGG 0.455366 8_4:+4640349 None:intergenic
AGAGCTAGTTCTACTTTGGT+TGG 0.457619 8_4:-4639730 Msa1308380:CDS
AGAGTTAGTTCAACTGTTGT+TGG 0.459714 8_4:-4649743 Msa1308380:five_prime_UTR
TAAGAACACATTCTGTTGCT+TGG 0.460229 8_4:+4650071 None:intergenic
GGAAGTGATTGTGCATGAAA+TGG 0.461128 8_4:-4639917 Msa1308380:CDS
TTCCAAACAAGAACTTTGCC+AGG 0.463658 8_4:-4650719 Msa1308380:five_prime_UTR
GGACCAATTGAGATTAATTG+AGG 0.464532 8_4:+4641032 None:intergenic
TTGGAGAGCTAGTTCTACTT+TGG 0.466290 8_4:-4639734 Msa1308380:CDS
AACATTATATGGGAATGTTA+AGG 0.469604 8_4:-4649790 Msa1308380:five_prime_UTR
ATTAGTTTCGAGAAAGTTCA+AGG 0.472626 8_4:-4650217 Msa1308380:five_prime_UTR
AGTGGCTTAATTGGTGATGT+TGG 0.477221 8_4:-4640426 Msa1308380:CDS
GGCTTAATTGGTGATGTTGG+TGG 0.479529 8_4:-4640423 Msa1308380:CDS
GTGGTGACATCAAATTGTTA+TGG 0.484272 8_4:-4649857 Msa1308380:five_prime_UTR
AGAGAAATTTGTGTTACTAT+GGG 0.491122 8_4:-4651048 Msa1308380:five_prime_UTR
AACAATGTTATGATGTTGAA+GGG 0.493158 8_4:-4639431 Msa1308380:three_prime_UTR
GTTGAAGTTCTTTATTTCCA+AGG 0.495312 8_4:+4641003 None:intergenic
GAAATCATTAGCCATGAACT+TGG 0.500879 8_4:-4649929 Msa1308380:five_prime_UTR
GCTACAAAGTTGAGTGAAGC+AGG 0.504844 8_4:-4650241 Msa1308380:five_prime_UTR
AGCAGATTGTAGCATCTACA+AGG 0.504878 8_4:-4641096 Msa1308380:CDS
TCTAAGGATTCCGCAATTGA+AGG 0.506886 8_4:-4640085 Msa1308380:CDS
CATAGTTGCATATGAAAGGT+TGG 0.506971 8_4:+4650011 None:intergenic
GAACAATGTTATGATGTTGA+AGG 0.508264 8_4:-4639432 Msa1308380:three_prime_UTR
TTTATGCACATGAGTTTGAA+AGG 0.509234 8_4:+4651632 None:intergenic
TCTGGATTCTGACTATGAAA+AGG 0.511649 8_4:+4650874 None:intergenic
ATTACATTCTAACACAAGCT+TGG 0.511928 8_4:-4640680 Msa1308380:CDS
AACTGGTGGAAACATTATAT+GGG 0.515685 8_4:-4649800 Msa1308380:five_prime_UTR
GATTTACAAAATGACACAAA+GGG 0.517121 8_4:-4650584 Msa1308380:five_prime_UTR
TTATTCTATAAGAAATAGGT+AGG 0.519243 8_4:-4651662 Msa1308380:five_prime_UTR
TTGATACTGACATTGTTCTA+GGG 0.522905 8_4:+4640023 None:intergenic
ATGTTTCAATCTAAATGACT+TGG 0.523292 8_4:+4640710 None:intergenic
GAAGTGATTGTGCATGAAAT+GGG 0.523677 8_4:-4639916 Msa1308380:CDS
CTTGGTCTACATTCAAATGC+GGG 0.526420 8_4:+4650089 None:intergenic
CTTCATTCAACTTCAAGAGA+TGG 0.534037 8_4:+4650929 None:intergenic
TCATGCAGAATTGGCAACAT+TGG 0.537428 8_4:-4649903 Msa1308380:five_prime_UTR
GTGTTATTAGCTGAAAAGAA+TGG 0.538677 8_4:-4650502 Msa1308380:five_prime_UTR
TTAACGGATTTAGAAAAGAG+TGG 0.543465 8_4:-4640285 Msa1308380:CDS
TTATGCACATGAGTTTGAAA+GGG 0.543663 8_4:+4651633 None:intergenic
CACCAACCACAATGCAGCCA+TGG 0.546124 8_4:+4639771 None:intergenic
GAAACATAGTTGCATATGAA+AGG 0.547120 8_4:+4650007 None:intergenic
TGGTTCAAACATGAAAATGA+AGG 0.548134 8_4:+4640120 None:intergenic
TTTCTAGTAGAAGAGATCTC+TGG 0.550214 8_4:+4639663 None:intergenic
TTAATTGGTGATGTTGGTGG+TGG 0.553225 8_4:-4640420 Msa1308380:CDS
AATTCCTCCAAAATAAACAT+AGG 0.557088 8_4:+4650535 None:intergenic
TCAATTGGTCCAATTCACCT+TGG 0.558480 8_4:-4641020 Msa1308380:CDS
GATTCGACAAATTTAAAACA+TGG 0.566903 8_4:+4650124 None:intergenic
GTAATGTAAGTATTAAACTC+TGG 0.571479 8_4:-4639482 Msa1308380:three_prime_UTR
ACCACAATGCAGCCATGGTA+CGG 0.571593 8_4:+4639776 None:intergenic
AAGATTATGTAATGAACGTG+AGG 0.577230 8_4:-4639392 Msa1308380:three_prime_UTR
TTCAACTTCAAGAGATGGTG+AGG 0.578382 8_4:+4650934 None:intergenic
ATGTATCCGATTTCCATGAA+CGG 0.580945 8_4:+4640760 None:intergenic
TGGTCTTTGTAAACATGTTG+TGG 0.582048 8_4:-4639863 Msa1308380:CDS
AATCTATGAGCAATAACCAT+AGG 0.583238 8_4:-4640365 Msa1308380:CDS
AAATCAGTGAAATGGTTGCA+AGG 0.586489 8_4:+4650361 None:intergenic
CATTGTTCGTAATATTGTAG+TGG 0.589968 8_4:+4639447 None:intergenic
ACAGTTGAACTAACTCTCCA+AGG 0.590172 8_4:+4649749 None:intergenic
TATGATAATAATGCAAACCA+TGG 0.592220 8_4:+4639624 None:intergenic
GACATTGTTCTAGGGCAATG+AGG 0.593451 8_4:+4640031 None:intergenic
ATCAAGAGAAACAGAAACAA+AGG 0.600906 8_4:-4650846 Msa1308380:five_prime_UTR
GGCTCAGCAAAAGCATCACA+AGG 0.605591 8_4:-4640659 Msa1308380:CDS
TGTTGATTTGTTGGTCGAGA+AGG 0.609668 8_4:-4639938 Msa1308380:CDS
ATGAACATTACAATAACTGG+TGG 0.610484 8_4:-4649814 Msa1308380:five_prime_UTR
TACCATGGCTGCATTGTGGT+TGG 0.611964 8_4:-4639773 Msa1308380:CDS
GCTTGGTCTACATTCAAATG+CGG 0.614751 8_4:+4650088 None:intergenic
GGATTTACAAAATGACACAA+AGG 0.620547 8_4:-4650585 Msa1308380:five_prime_UTR
AATCCGTTAAATCAGCTGGA+AGG 0.622325 8_4:+4640298 None:intergenic
AGATTATGTAATGAACGTGA+GGG 0.626426 8_4:-4639391 Msa1308380:three_prime_UTR
TGGTCTTTGCAAATATGTTG+TGG 0.629307 8_4:-4649876 Msa1308380:five_prime_UTR
AATGGGAAGTGATAAAGAAG+TGG 0.638138 8_4:-4639899 Msa1308380:CDS
GAATATTTGGAACCGTACCA+TGG 0.643141 8_4:-4639788 Msa1308380:CDS
TTGATTATGTGCTGAATCTG+TGG 0.644996 8_4:+4651012 None:intergenic
GATTATGTAATGAACGTGAG+GGG 0.661948 8_4:-4639390 Msa1308380:three_prime_UTR
GTGTGATCAACCTTCAATTG+CGG 0.689659 8_4:+4640075 None:intergenic
TTTGGAGGAATTACACAGAG+GGG 0.695602 8_4:-4650524 Msa1308380:five_prime_UTR
GCTCAGCAAAAGCATCACAA+GGG 0.717992 8_4:-4640658 Msa1308380:CDS
ACCGTACCATGGCTGCATTG+TGG 0.722473 8_4:-4639777 Msa1308380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATAATTTAATTTTTTTTA+AGG - chr8_4:4643702-4643721 Msa1308380:intron 0.0%
!! ATATTTATTCTATAAGAAAT+AGG - chr8_4:4639430-4639449 Msa1308380:three_prime_UTR 10.0%
!!! ATTATTTTAAATCTTTACAA+CGG + chr8_4:4641854-4641873 None:intergenic 10.0%
!!! AAAAAAAAAAACTCTAAAAT+AGG - chr8_4:4641966-4641985 Msa1308380:intron 10.0%
!!! TTAAATTTCATTTTAAATAC+AGG + chr8_4:4642390-4642409 None:intergenic 10.0%
!! TATTTAAATCTATTATATGA+AGG - chr8_4:4643135-4643154 Msa1308380:intron 10.0%
!!! TTATTATTATTTTTTAACGA+AGG - chr8_4:4643591-4643610 Msa1308380:intron 10.0%
!! GATTATAATTAAATATTATG+AGG - chr8_4:4643724-4643743 Msa1308380:intron 10.0%
!!! TAAAGAAGAAATTTTATTTT+AGG - chr8_4:4644017-4644036 Msa1308380:intron 10.0%
!!! AATGAAATATTTTAATATCA+AGG - chr8_4:4645884-4645903 Msa1308380:intron 10.0%
!! TTATATGTAAATTGAATTAT+TGG - chr8_4:4646266-4646285 Msa1308380:intron 10.0%
!!! CATAATATATTTTTTTTTTG+AGG - chr8_4:4646589-4646608 Msa1308380:intron 10.0%
!! AATTACATAATATATATGTA+AGG - chr8_4:4646613-4646632 Msa1308380:intron 10.0%
!! ATTACATAATATATATGTAA+GGG - chr8_4:4646614-4646633 Msa1308380:intron 10.0%
!!! ACATAAATTGTATTTTTATA+TGG + chr8_4:4646793-4646812 None:intergenic 10.0%
!! AAATAATTATTATTTGTGTA+GGG - chr8_4:4646864-4646883 Msa1308380:intron 10.0%
!!! GTTTTCTTTTTTTTTTTTTT+GGG + chr8_4:4647587-4647606 None:intergenic 10.0%
!!! AGTTTTCTTTTTTTTTTTTT+TGG + chr8_4:4647588-4647607 None:intergenic 10.0%
!!! TTATTACGAATAATTTTTTT+AGG + chr8_4:4647704-4647723 None:intergenic 10.0%
!!! GAAAATATAAATTTTATTCA+TGG + chr8_4:4648045-4648064 None:intergenic 10.0%
!! TCTTAGAAAATTAAAAAAAT+AGG - chr8_4:4648831-4648850 Msa1308380:intron 10.0%
!! TAAATATAATATGAATATCT+TGG + chr8_4:4648925-4648944 None:intergenic 10.0%
!!! TCTTTATATAATTGATTTAA+AGG - chr8_4:4649096-4649115 Msa1308380:intron 10.0%
!!! TTTTAATTATAAGATAAGAT+AGG - chr8_4:4649204-4649223 Msa1308380:intron 10.0%
!!! AAATTTACAAACTTTTTATA+GGG + chr8_4:4649411-4649430 None:intergenic 10.0%
!!! AAAATTTACAAACTTTTTAT+AGG + chr8_4:4649412-4649431 None:intergenic 10.0%
!!! TATAAAAAGTTTGTAAATTT+TGG - chr8_4:4649411-4649430 Msa1308380:intron 10.0%
!! AAATAAATAATTACCTAGAA+TGG + chr8_4:4639490-4639509 None:intergenic 15.0%
!!! TTTTTTAATTTGATTGCTAT+AGG - chr8_4:4640014-4640033 Msa1308380:CDS 15.0%
!!! TGAATTATATTATTAGTTTC+TGG - chr8_4:4641509-4641528 Msa1308380:intron 15.0%
!! AATATATATAACATGTAAGT+TGG - chr8_4:4641733-4641752 Msa1308380:intron 15.0%
!!! AATTTGTTCTATATAATTTC+AGG + chr8_4:4642709-4642728 None:intergenic 15.0%
!! GAAATTATATAGAACAAATT+TGG - chr8_4:4642709-4642728 Msa1308380:intron 15.0%
!!! TCATTTTCTTTGTAAATTTA+TGG + chr8_4:4642788-4642807 None:intergenic 15.0%
!! ATAAATTTACAAAGAAAATG+AGG - chr8_4:4642787-4642806 Msa1308380:intron 15.0%
!! TGTAATTATAAAAGGAAAAA+TGG + chr8_4:4642903-4642922 None:intergenic 15.0%
!! TCATAAGATGTAATTATAAA+AGG + chr8_4:4642911-4642930 None:intergenic 15.0%
!!! CAAATAAAAAGTACTTAAAT+AGG + chr8_4:4643806-4643825 None:intergenic 15.0%
!!! AGTAAAAAAAAAACTTTTAG+TGG - chr8_4:4644221-4644240 Msa1308380:intron 15.0%
!!! TCAATATCTTCTTTAAAAAA+AGG - chr8_4:4644244-4644263 Msa1308380:intron 15.0%
!!! CAATATCTTCTTTAAAAAAA+GGG - chr8_4:4644245-4644264 Msa1308380:intron 15.0%
!!! AATATCTTCTTTAAAAAAAG+GGG - chr8_4:4644246-4644265 Msa1308380:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr8_4:4644445-4644464 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr8_4:4644446-4644465 None:intergenic 15.0%
!! AAAGTTGAATATATTGTATT+GGG + chr8_4:4644486-4644505 None:intergenic 15.0%
!! TCACTAACTATAATTAATAA+TGG + chr8_4:4644957-4644976 None:intergenic 15.0%
!!! AATAAATAAGAGTATAATAG+TGG - chr8_4:4645000-4645019 Msa1308380:intron 15.0%
!! ATTTATCTTTGTATATTAGT+AGG + chr8_4:4645145-4645164 None:intergenic 15.0%
!!! GTAAAGTTTATGTATTTTTT+TGG + chr8_4:4645388-4645407 None:intergenic 15.0%
!!! TCTATATTTTTTGTAACAAA+AGG - chr8_4:4645415-4645434 Msa1308380:intron 15.0%
!!! ACAATAACTCTTTTTATATA+GGG - chr8_4:4645780-4645799 Msa1308380:intron 15.0%
!! AAATCTCATTATATAATGAA+GGG + chr8_4:4645987-4646006 None:intergenic 15.0%
!! TAAATCTCATTATATAATGA+AGG + chr8_4:4645988-4646007 None:intergenic 15.0%
!! CAAATAATTATTATTTGTGT+AGG - chr8_4:4646863-4646882 Msa1308380:intron 15.0%
!!! TTGATGACAATAAATAATAT+AGG - chr8_4:4646927-4646946 Msa1308380:intron 15.0%
!!! GTAAGTAGTAATATTTTTTT+AGG + chr8_4:4647412-4647431 None:intergenic 15.0%
!! AGAAAACTTTATTACTTTAT+TGG - chr8_4:4647600-4647619 Msa1308380:intron 15.0%
!!! TTTCAATTCTTATTCTATTT+TGG - chr8_4:4648427-4648446 Msa1308380:intron 15.0%
!! ACAAATCAAGAATATATAAA+TGG + chr8_4:4648606-4648625 None:intergenic 15.0%
!!! AATAAGCTTAATTGTATTTT+TGG - chr8_4:4649258-4649277 Msa1308380:intron 15.0%
!!! AATTTACAAACTTTTTATAG+GGG + chr8_4:4649410-4649429 None:intergenic 15.0%
!!! TCTTTTCATTTTCAAAATTA+AGG - chr8_4:4649451-4649470 Msa1308380:intron 15.0%
!! AAAACTATGATTAGAAAATA+TGG - chr8_4:4649612-4649631 Msa1308380:five_prime_UTR 15.0%
!! TTATTCTATAAGAAATAGGT+AGG - chr8_4:4639434-4639453 Msa1308380:three_prime_UTR 20.0%
!! AACAACTTAAAAAAACTGTT+AGG + chr8_4:4639541-4639560 None:intergenic 20.0%
!!! TTTAAGTTGTTTTTTGCATT+TGG - chr8_4:4639550-4639569 Msa1308380:three_prime_UTR 20.0%
!!! AAATAAACAAACTTTAGCTT+TGG - chr8_4:4640302-4640321 Msa1308380:CDS 20.0%
!!! TCAAATTCCTATGTTTATTT+TGG - chr8_4:4640554-4640573 Msa1308380:CDS 20.0%
!! AAAGTTAACAAGTCAAAAAT+TGG - chr8_4:4640692-4640711 Msa1308380:CDS 20.0%
!!! TTAAATCGTGTATGAAATTT+TGG - chr8_4:4641639-4641658 Msa1308380:intron 20.0%
!!! TGCATACAATAATTTTTAGT+CGG + chr8_4:4642354-4642373 None:intergenic 20.0%
!!! ACCATTTCTATGATAATTTT+TGG - chr8_4:4642757-4642776 Msa1308380:intron 20.0%
!!! CCATTTCTATGATAATTTTT+GGG - chr8_4:4642758-4642777 Msa1308380:intron 20.0%
!! TTGTTTCATGTATTCTTAAT+TGG + chr8_4:4643087-4643106 None:intergenic 20.0%
!! TTATATGAAGGAAAAACAAT+TGG - chr8_4:4643147-4643166 Msa1308380:intron 20.0%
!! TATATGAAGGAAAAACAATT+GGG - chr8_4:4643148-4643167 Msa1308380:intron 20.0%
!! TCTATAATTAGAAGTTTGAT+GGG + chr8_4:4643222-4643241 None:intergenic 20.0%
!! TTCTATAATTAGAAGTTTGA+TGG + chr8_4:4643223-4643242 None:intergenic 20.0%
!! TTTAATCATTCATTCGTTAT+CGG - chr8_4:4643377-4643396 Msa1308380:intron 20.0%
!! TGATTTGATTATTCAGAAAT+GGG + chr8_4:4643467-4643486 None:intergenic 20.0%
!! ATGATTTGATTATTCAGAAA+TGG + chr8_4:4643468-4643487 None:intergenic 20.0%
!! TTTCAAATTATTAGCAAATG+TGG - chr8_4:4643645-4643664 Msa1308380:intron 20.0%
!! ACAATGATAGTTTCTTAATA+TGG + chr8_4:4643939-4643958 None:intergenic 20.0%
!! ATATTAAGAAACTATCATTG+TGG - chr8_4:4643938-4643957 Msa1308380:intron 20.0%
!! GTATTTACTAAAACTATTTG+CGG + chr8_4:4644182-4644201 None:intergenic 20.0%
!!! ATATCTTCTTTAAAAAAAGG+GGG - chr8_4:4644247-4644266 Msa1308380:intron 20.0%
!! GAAAGTTGAATATATTGTAT+TGG + chr8_4:4644487-4644506 None:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+AGG + chr8_4:4644509-4644528 None:intergenic 20.0%
!! TTATTTATAAGCACATCTAA+AGG + chr8_4:4644668-4644687 None:intergenic 20.0%
!! GTGTACAATTATTAAGAAAA+TGG - chr8_4:4644883-4644902 Msa1308380:intron 20.0%
!! TAATTCATATCAAATGTTGT+TGG - chr8_4:4645164-4645183 Msa1308380:intron 20.0%
!! CAAAAAAAATTATGTGTTGT+GGG + chr8_4:4645364-4645383 None:intergenic 20.0%
!! TATCCATTAAAGTGAATAAA+CGG - chr8_4:4645498-4645517 Msa1308380:intron 20.0%
!!! TTAGAATTTTGATACATTGA+AGG + chr8_4:4645692-4645711 None:intergenic 20.0%
!!! ACTATTTTAACTAACAAAGT+GGG + chr8_4:4645730-4645749 None:intergenic 20.0%
!!! CACAATAACTCTTTTTATAT+AGG - chr8_4:4645779-4645798 Msa1308380:intron 20.0%
!! ATAATAAGTAAGTCTATTCA+AGG - chr8_4:4645844-4645863 Msa1308380:intron 20.0%
!! AATCTCATTATATAATGAAG+GGG + chr8_4:4645986-4646005 None:intergenic 20.0%
!! CAAACTTTACTTATATTTCA+GGG + chr8_4:4646157-4646176 None:intergenic 20.0%
!! TCAAACTTTACTTATATTTC+AGG + chr8_4:4646158-4646177 None:intergenic 20.0%
!! AATTTATTCCATTGAACAAT+TGG - chr8_4:4646182-4646201 Msa1308380:intron 20.0%
!! CGAAAATAAAAAAGGAAAAA+AGG - chr8_4:4646312-4646331 Msa1308380:intron 20.0%
!! AAATAAAAAAGGAAAAAAGG+TGG - chr8_4:4646315-4646334 Msa1308380:intron 20.0%
!! AATAAAAAAGGAAAAAAGGT+GGG - chr8_4:4646316-4646335 Msa1308380:intron 20.0%
!!! TGTATTTTTATATGGAAAGA+AGG + chr8_4:4646785-4646804 None:intergenic 20.0%
!! AATCATGAAAAACATTAAGA+TGG - chr8_4:4647008-4647027 Msa1308380:intron 20.0%
!!! TTCTTTTTTTTTTTTTTGGG+TGG + chr8_4:4647584-4647603 None:intergenic 20.0%
!! TTTATTACTTTATTGGCATA+TGG - chr8_4:4647607-4647626 Msa1308380:intron 20.0%
!!! GTACATATCTATTATTTTGA+AGG + chr8_4:4647682-4647701 None:intergenic 20.0%
!!! TTTATGATTTTAAACCATGA+AGG + chr8_4:4648017-4648036 None:intergenic 20.0%
!!! TCATGGTTTAAAATCATAAA+TGG - chr8_4:4648017-4648036 Msa1308380:intron 20.0%
!! CTACAAAAGTAAGATATATT+TGG - chr8_4:4648189-4648208 Msa1308380:intron 20.0%
!! TAATGACAAAACATATGTAA+GGG + chr8_4:4648484-4648503 None:intergenic 20.0%
!! TGGACACAAAATTATATATA+AGG + chr8_4:4648586-4648605 None:intergenic 20.0%
!! TTATAAGATAAGATAGGTAA+TGG - chr8_4:4649210-4649229 Msa1308380:intron 20.0%
!! TTTCGTAAACATGATAAAAT+AGG + chr8_4:4649289-4649308 None:intergenic 20.0%
!!! CCAAAACTTTGATTTAAAAA+GGG + chr8_4:4649319-4649338 None:intergenic 20.0%
!!! ACCAAAACTTTGATTTAAAA+AGG + chr8_4:4649320-4649339 None:intergenic 20.0%
!!! ATTCTCATTTATTGACATTT+TGG - chr8_4:4649346-4649365 Msa1308380:intron 20.0%
!!! ATTTACAAACTTTTTATAGG+GGG + chr8_4:4649409-4649428 None:intergenic 20.0%
!!! AAAAGAAAATGCCATTTTTT+GGG + chr8_4:4649437-4649456 None:intergenic 20.0%
!!! AGATTTTTAGCTTGTAAAAA+TGG + chr8_4:4649480-4649499 None:intergenic 20.0%
!! TAAAATAGGGGAATAAAAAA+TGG - chr8_4:4649578-4649597 Msa1308380:CDS 20.0%
!! TCAACTAAAATGTAATCAAT+TGG - chr8_4:4649767-4649786 Msa1308380:five_prime_UTR 20.0%
!!! ATACAAGTATTAAAGTGTTT+TGG - chr8_4:4649831-4649850 Msa1308380:five_prime_UTR 20.0%
!!! AATTTTTCTTTGCTTATGTT+GGG + chr8_4:4650262-4650281 None:intergenic 20.0%
!!! AAATTTTTCTTTGCTTATGT+TGG + chr8_4:4650263-4650282 None:intergenic 20.0%
!!! AAGAAATATTATTTTGTGAG+TGG - chr8_4:4650652-4650671 Msa1308380:five_prime_UTR 20.0%
!!! TTTATCAGAATGTTTTTTCT+TGG + chr8_4:4650713-4650732 None:intergenic 20.0%
!! GAAACATAATTGCATATATA+AGG + chr8_4:4651105-4651124 None:intergenic 20.0%
!! ATAAGCATTATCAGAATATT+TGG - chr8_4:4651295-4651314 Msa1308380:intron 20.0%
!! ACTTAAAAATGTATAATCCA+TGG - chr8_4:4651455-4651474 Msa1308380:intron 20.0%
!!! TTTATAGTTTTTGTTGTTGT+TGG - chr8_4:4651528-4651547 Msa1308380:intron 20.0%
!! TGTACGAATTAAAGAATAAA+TGG - chr8_4:4651577-4651596 Msa1308380:intron 20.0%
! AAGATTAGGTTAAACTTTGA+AGG + chr8_4:4639688-4639707 None:intergenic 25.0%
! ACAGAGAACTAAAAAAGATT+AGG + chr8_4:4639702-4639721 None:intergenic 25.0%
! TGATTGCTATAGGTAAAAAA+AGG - chr8_4:4640024-4640043 Msa1308380:CDS 25.0%
!! AAGAGAAATTTGTGTTACTA+TGG - chr8_4:4640047-4640066 Msa1308380:CDS 25.0%
!! AGAGAAATTTGTGTTACTAT+GGG - chr8_4:4640048-4640067 Msa1308380:CDS 25.0%
!! CAACATTTTTCATGTAACAT+AGG + chr8_4:4640129-4640148 None:intergenic 25.0%
! TGAAAAATGTTGCATTTACA+AGG - chr8_4:4640137-4640156 Msa1308380:CDS 25.0%
! ATTTCATGTTTACAACATCA+TGG - chr8_4:4640490-4640509 Msa1308380:CDS 25.0%
! GATTTACAAAATGACACAAA+GGG - chr8_4:4640512-4640531 Msa1308380:CDS 25.0%
!!! AATTCCTATGTTTATTTTGG+AGG - chr8_4:4640557-4640576 Msa1308380:CDS 25.0%
! AATTCCTCCAAAATAAACAT+AGG + chr8_4:4640564-4640583 None:intergenic 25.0%
!!! TTTTGACTTGTTAACTTTTG+AGG + chr8_4:4640690-4640709 None:intergenic 25.0%
! ATCTAATCAAATCAGTGAAA+TGG + chr8_4:4640746-4640765 None:intergenic 25.0%
! TCCAAGAGAAATTCAAATTA+AGG - chr8_4:4640776-4640795 Msa1308380:CDS 25.0%
! CCAAGAGAAATTCAAATTAA+GGG - chr8_4:4640777-4640796 Msa1308380:CDS 25.0%
!! GATTCGACAAATTTAAAACA+TGG + chr8_4:4640975-4640994 None:intergenic 25.0%
! TTGTTATGGAAAGATCATTA+AGG - chr8_4:4641253-4641272 Msa1308380:intron 25.0%
! TGAATGAACATTACAATAAC+TGG - chr8_4:4641279-4641298 Msa1308380:intron 25.0%
! AACATTATATGGGAATGTTA+AGG - chr8_4:4641306-4641325 Msa1308380:intron 25.0%
!! GTCAATTTTCTTAGAGTTAT+TGG - chr8_4:4641401-4641420 Msa1308380:intron 25.0%
! CTAATAAGATACAGTATGTT+TGG + chr8_4:4641480-4641499 None:intergenic 25.0%
! TGTAATGTTAACATGATCAT+TGG - chr8_4:4641544-4641563 Msa1308380:intron 25.0%
!! TGTTTGGATATAATTTTGAG+TGG - chr8_4:4641760-4641779 Msa1308380:intron 25.0%
! TATCATTGTAGCATATGTTT+GGG - chr8_4:4642023-4642042 Msa1308380:intron 25.0%
! TTGGAAGAAAAAGAAAATTC+AGG + chr8_4:4642200-4642219 None:intergenic 25.0%
! ATGTGTGTGTAAAAATTCAA+TGG + chr8_4:4642249-4642268 None:intergenic 25.0%
! CTAATGAACTTTAGATTAAG+AGG + chr8_4:4642317-4642336 None:intergenic 25.0%
!! TAATCTAAAGTTCATTAGAG+AGG - chr8_4:4642319-4642338 Msa1308380:intron 25.0%
! CATTGATATCAACTTTAGTT+AGG + chr8_4:4642498-4642517 None:intergenic 25.0%
!! ATTTTCCTCATAACAAAATG+AGG + chr8_4:4642589-4642608 None:intergenic 25.0%
! TTGTTCTATATAATTTCAGG+TGG + chr8_4:4642706-4642725 None:intergenic 25.0%
! CCCAAAAATTATCATAGAAA+TGG + chr8_4:4642761-4642780 None:intergenic 25.0%
! AAATAAACCAATAGTACCAA+TGG - chr8_4:4643410-4643429 Msa1308380:intron 25.0%
! ATTTGATTATTCAGAAATGG+GGG + chr8_4:4643465-4643484 None:intergenic 25.0%
! GATTTGATTATTCAGAAATG+GGG + chr8_4:4643466-4643485 None:intergenic 25.0%
! TTTAATGGTGTAAAAGTAGT+GGG - chr8_4:4643779-4643798 Msa1308380:intron 25.0%
!!! GTAAGTGATGATTAGTTTTA+TGG + chr8_4:4644160-4644179 None:intergenic 25.0%
! GGCTTAAAAAAAATTCACAT+TGG + chr8_4:4644280-4644299 None:intergenic 25.0%
! ATCGTGATAATTAATTCACA+TGG + chr8_4:4644301-4644320 None:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG + chr8_4:4644398-4644417 None:intergenic 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG + chr8_4:4644399-4644418 None:intergenic 25.0%
! TCAATCATGTCATCTAATAT+GGG + chr8_4:4644788-4644807 None:intergenic 25.0%
! TCAACTGTATCACTTAATAT+AGG - chr8_4:4645292-4645311 Msa1308380:intron 25.0%
! CCAAAAAAAATTATGTGTTG+TGG + chr8_4:4645365-4645384 None:intergenic 25.0%
!!! CCACAACACATAATTTTTTT+TGG - chr8_4:4645362-4645381 Msa1308380:intron 25.0%
!!! GACTATTTTAACTAACAAAG+TGG + chr8_4:4645731-4645750 None:intergenic 25.0%
! AGAGTTATTGTGAGTATTAA+GGG + chr8_4:4645771-4645790 None:intergenic 25.0%
! AAGAGTTATTGTGAGTATTA+AGG + chr8_4:4645772-4645791 None:intergenic 25.0%
! ACAATAAGTAAGTACGTATA+AGG - chr8_4:4645812-4645831 Msa1308380:intron 25.0%
!! TTTGAAATTTCGATACATTG+AGG - chr8_4:4645912-4645931 Msa1308380:intron 25.0%
! TTGAAATTTCGATACATTGA+GGG - chr8_4:4645913-4645932 Msa1308380:intron 25.0%
!!! GTCTTTTTTTGTTGGTTTTT+GGG + chr8_4:4646071-4646090 None:intergenic 25.0%
!!! TGTCTTTTTTTGTTGGTTTT+TGG + chr8_4:4646072-4646091 None:intergenic 25.0%
!!! TTCTAGTTTTTAAGAGAAAG+AGG - chr8_4:4646112-4646131 Msa1308380:intron 25.0%
! TTTCAATTCCAATTGTTCAA+TGG + chr8_4:4646193-4646212 None:intergenic 25.0%
! TAGAGAGACGAAAATAAAAA+AGG - chr8_4:4646304-4646323 Msa1308380:intron 25.0%
! ATTACAAAGTTGTCTAATTC+CGG + chr8_4:4647054-4647073 None:intergenic 25.0%
!!! ATCTTGCTATGTTTTTTTAG+AGG - chr8_4:4647072-4647091 Msa1308380:intron 25.0%
! GTTTATCCTTGATTAAGTTT+GGG - chr8_4:4647094-4647113 Msa1308380:intron 25.0%
! TTTATCCTTGATTAAGTTTG+GGG - chr8_4:4647095-4647114 Msa1308380:intron 25.0%
! ATTTCTATCTTTCTCTGTTA+AGG - chr8_4:4647273-4647292 Msa1308380:intron 25.0%
!!! ACTTGCTAGTTTCTTTTTTA+GGG - chr8_4:4647471-4647490 Msa1308380:intron 25.0%
! AAAAACCAAAGCTAATAATC+AGG - chr8_4:4647645-4647664 Msa1308380:intron 25.0%
!! ATAAACCTGATTATTAGCTT+TGG + chr8_4:4647653-4647672 None:intergenic 25.0%
!! ATTTAGAATAAGCTAGAAGA+CGG - chr8_4:4647773-4647792 Msa1308380:intron 25.0%
! TTTGCATTATCCTTCATTTA+AGG - chr8_4:4647850-4647869 Msa1308380:intron 25.0%
! TTGCATTATCCTTCATTTAA+GGG - chr8_4:4647851-4647870 Msa1308380:intron 25.0%
! CACTACATGATTAAAGTTAA+GGG - chr8_4:4648224-4648243 Msa1308380:intron 25.0%
! ACTACATGATTAAAGTTAAG+GGG - chr8_4:4648225-4648244 Msa1308380:intron 25.0%
! CTAATGACAAAACATATGTA+AGG + chr8_4:4648485-4648504 None:intergenic 25.0%
! GATTCATTGTTTCATATGAT+AGG - chr8_4:4648682-4648701 Msa1308380:intron 25.0%
! TAGTGTGATTGATAAAAACA+AGG - chr8_4:4648759-4648778 Msa1308380:intron 25.0%
! AGTGTGATTGATAAAAACAA+GGG - chr8_4:4648760-4648779 Msa1308380:intron 25.0%
! TTGTGCTCACAAAAATTATT+TGG - chr8_4:4649060-4649079 Msa1308380:intron 25.0%
! GTAAACATGATAAAATAGGA+CGG + chr8_4:4649285-4649304 None:intergenic 25.0%
!! CCCTTTTTAAATCAAAGTTT+TGG - chr8_4:4649316-4649335 Msa1308380:intron 25.0%
!!! GAAAAGAAAATGCCATTTTT+TGG + chr8_4:4649438-4649457 None:intergenic 25.0%
!!! TTTTTAGCTTGTAAAAATGG+TGG + chr8_4:4649477-4649496 None:intergenic 25.0%
!! ATAGTTCTCCTTAAACTTTT+TGG + chr8_4:4649544-4649563 None:intergenic 25.0%
!! AAGTTTAAGGAGAACTATTT+TGG - chr8_4:4649546-4649565 Msa1308380:CDS 25.0%
!! TATGTGTAAGTGAATGTTTT+GGG + chr8_4:4649668-4649687 None:intergenic 25.0%
!! TTATGTGTAAGTGAATGTTT+TGG + chr8_4:4649669-4649688 None:intergenic 25.0%
! TTATCACTTATTGCAATGAT+GGG + chr8_4:4649733-4649752 None:intergenic 25.0%
! TTTATCACTTATTGCAATGA+TGG + chr8_4:4649734-4649753 None:intergenic 25.0%
! TCATTGCAATAAGTGATAAA+AGG - chr8_4:4649734-4649753 Msa1308380:five_prime_UTR 25.0%
! CACAGGGAAAAATAATATTA+TGG - chr8_4:4649883-4649902 Msa1308380:five_prime_UTR 25.0%
!! ATCTGAAACTGAATATGAAA+TGG - chr8_4:4649934-4649953 Msa1308380:five_prime_UTR 25.0%
! CATAAGCAAAGAAAAATTTG+TGG - chr8_4:4650264-4650283 Msa1308380:five_prime_UTR 25.0%
!! ATTTGTGGAAACAATTTTGT+TGG - chr8_4:4650279-4650298 Msa1308380:five_prime_UTR 25.0%
! ATGTTTCAATCTAAATGACT+TGG + chr8_4:4650389-4650408 None:intergenic 25.0%
!! CAAGATCAAGAAAACTTTTA+TGG + chr8_4:4650552-4650571 None:intergenic 25.0%
! ATCAAATCAGTGAAATGTTT+AGG + chr8_4:4650766-4650785 None:intergenic 25.0%
!!! AACATTTCACTGATTTGATA+AGG - chr8_4:4650767-4650786 Msa1308380:five_prime_UTR 25.0%
! ATTAACTTTGTTACTGTTCT+TGG + chr8_4:4650853-4650872 None:intergenic 25.0%
! GTAACAAAGTTAATAGATTC+TGG - chr8_4:4650859-4650878 Msa1308380:five_prime_UTR 25.0%
! TATGATAATAATGCAAACCA+TGG + chr8_4:4651475-4651494 None:intergenic 25.0%
! GTAATGTAAGTATTAAACTC+TGG - chr8_4:4651614-4651633 Msa1308380:intron 25.0%
! AACAATGTTATGATGTTGAA+GGG - chr8_4:4651665-4651684 Msa1308380:five_prime_UTR 25.0%
CTATAAGAAATAGGTAGGTT+TGG - chr8_4:4639439-4639458 Msa1308380:three_prime_UTR 30.0%
TTATGCACATGAGTTTGAAA+GGG + chr8_4:4639466-4639485 None:intergenic 30.0%
TTTATGCACATGAGTTTGAA+AGG + chr8_4:4639467-4639486 None:intergenic 30.0%
TAACAAGTCTTGAAAGAAAG+TGG + chr8_4:4639592-4639611 None:intergenic 30.0%
ACACCAAAGTTTATCTCAAT+TGG - chr8_4:4640198-4640217 Msa1308380:CDS 30.0%
TGTTTCTCTTGATTAAGTTC+TGG + chr8_4:4640243-4640262 None:intergenic 30.0%
ATCAAGAGAAACAGAAACAA+AGG - chr8_4:4640250-4640269 Msa1308380:CDS 30.0%
!!! AAAGGTACTTTCATGCTTTT+TGG - chr8_4:4640268-4640287 Msa1308380:CDS 30.0%
! GTTAGACTCAGTTTTCATAA+TGG - chr8_4:4640425-4640444 Msa1308380:CDS 30.0%
GGATTTACAAAATGACACAA+AGG - chr8_4:4640511-4640530 Msa1308380:CDS 30.0%
! GTGTTATTAGCTGAAAAGAA+TGG - chr8_4:4640594-4640613 Msa1308380:CDS 30.0%
! CCCTTAATTTGAATTTCTCT+TGG + chr8_4:4640780-4640799 None:intergenic 30.0%
!! AAAGGTGTGAAACTTTTTGA+TGG + chr8_4:4640810-4640829 None:intergenic 30.0%
AGTACATATTCTGGTCTAAA+AGG + chr8_4:4640828-4640847 None:intergenic 30.0%
! ATTAGTTTCGAGAAAGTTCA+AGG - chr8_4:4640879-4640898 Msa1308380:CDS 30.0%
GAAACATAGTTGCATATGAA+AGG + chr8_4:4641092-4641111 None:intergenic 30.0%
ATGAACATTACAATAACTGG+TGG - chr8_4:4641282-4641301 Msa1308380:intron 30.0%
TAACTGGTGGAAACATTATA+TGG - chr8_4:4641295-4641314 Msa1308380:intron 30.0%
AACTGGTGGAAACATTATAT+GGG - chr8_4:4641296-4641315 Msa1308380:intron 30.0%
!!! CGATAGAATTTTTTATGTCC+TGG - chr8_4:4641662-4641681 Msa1308380:intron 30.0%
!! ATTTTTCAGTGAGAAGTTCA+GGG + chr8_4:4641716-4641735 None:intergenic 30.0%
!! TATTTTTCAGTGAGAAGTTC+AGG + chr8_4:4641717-4641736 None:intergenic 30.0%
! TGATTTTCACATACAAGTGT+TGG - chr8_4:4641808-4641827 Msa1308380:intron 30.0%
CTATCATTGTAGCATATGTT+TGG - chr8_4:4642022-4642041 Msa1308380:intron 30.0%
! TTTGTAGCTTCTAGAAATCA+TGG + chr8_4:4642092-4642111 None:intergenic 30.0%
TTATTCTCTCTCTATTGCTT+TGG + chr8_4:4642827-4642846 None:intergenic 30.0%
TAATTACATCTTATGACCAG+AGG - chr8_4:4642915-4642934 Msa1308380:intron 30.0%
! CACACCAATATTTAAAGTCT+AGG + chr8_4:4642945-4642964 None:intergenic 30.0%
ATGAAGCACAATAGCAAAAA+TGG - chr8_4:4643015-4643034 Msa1308380:intron 30.0%
TTTAGATGAGAGATGATAAG+TGG + chr8_4:4643349-4643368 None:intergenic 30.0%
GTTTAATGGTGTAAAAGTAG+TGG - chr8_4:4643778-4643797 Msa1308380:intron 30.0%
TTAATGGTGTAAAAGTAGTG+GGG - chr8_4:4643780-4643799 Msa1308380:intron 30.0%
! ATGAGAGTACAGTACTAATA+AGG + chr8_4:4643832-4643851 None:intergenic 30.0%
TATTAGTACTGTACTCTCAT+TGG - chr8_4:4643832-4643851 Msa1308380:intron 30.0%
CTTAATATGGACTCCTTAAA+TGG + chr8_4:4643926-4643945 None:intergenic 30.0%
CTTGCTAACAAGTATCTTTA+GGG + chr8_4:4644136-4644155 None:intergenic 30.0%
TCTTGCTAACAAGTATCTTT+AGG + chr8_4:4644137-4644156 None:intergenic 30.0%
! TAAGTAGATAGGGCATTAAA+TGG - chr8_4:4644696-4644715 Msa1308380:intron 30.0%
! AAGTAGATAGGGCATTAAAT+GGG - chr8_4:4644697-4644716 Msa1308380:intron 30.0%
! AGTAACTTTTCATGCAGAAA+TGG + chr8_4:4644757-4644776 None:intergenic 30.0%
GTCAATCATGTCATCTAATA+TGG + chr8_4:4644789-4644808 None:intergenic 30.0%
!! AGACTAATATTCTAAGACGA+AGG + chr8_4:4644834-4644853 None:intergenic 30.0%
AACAATAATTGTGACACAGA+AGG - chr8_4:4645095-4645114 Msa1308380:intron 30.0%
CTGTATCACTTAATATAGGA+CGG - chr8_4:4645296-4645315 Msa1308380:intron 30.0%
GATAATGAAGTGTGTAGATA+TGG + chr8_4:4645337-4645356 None:intergenic 30.0%
AAAAATTATGTGTTGTGGGA+CGG + chr8_4:4645360-4645379 None:intergenic 30.0%
CAACCGTTTATTCACTTTAA+TGG + chr8_4:4645504-4645523 None:intergenic 30.0%
ACCACTCATGTTTCATTATA+GGG - chr8_4:4645618-4645637 Msa1308380:intron 30.0%
AAGGGATTATTTAAGCGTTA+GGG + chr8_4:4645753-4645772 None:intergenic 30.0%
TAAGGGATTATTTAAGCGTT+AGG + chr8_4:4645754-4645773 None:intergenic 30.0%
!!! ACATCTGTGTCTTTTTTTGT+TGG + chr8_4:4646079-4646098 None:intergenic 30.0%
ACGTCAATTAAAAAATACGC+AGG - chr8_4:4646217-4646236 Msa1308380:intron 30.0%
ATTAAAAAATACGCAGGCAA+AGG - chr8_4:4646223-4646242 Msa1308380:intron 30.0%
TTGAATTATTGGCAGATTGA+TGG - chr8_4:4646277-4646296 Msa1308380:intron 30.0%
!! GCAATTGTTTCTACAATTAG+TGG - chr8_4:4646444-4646463 Msa1308380:intron 30.0%
CATATTATGTAGTTCACATG+AGG + chr8_4:4646699-4646718 None:intergenic 30.0%
CTCATGTGAACTACATAATA+TGG - chr8_4:4646697-4646716 Msa1308380:intron 30.0%
CATCAAATAGCATCACAAAT+AGG - chr8_4:4646958-4646977 Msa1308380:intron 30.0%
GGTTTATCCTTGATTAAGTT+TGG - chr8_4:4647093-4647112 Msa1308380:intron 30.0%
GACATTATAGTGAGAAGAAA+TGG - chr8_4:4647131-4647150 Msa1308380:intron 30.0%
GAGAAAGATAGAAATCGATT+AGG + chr8_4:4647268-4647287 None:intergenic 30.0%
! TTTTGCTCGTGACAAATTAT+TGG + chr8_4:4647307-4647326 None:intergenic 30.0%
AATTTGATTAGGTTATGACG+GGG + chr8_4:4647331-4647350 None:intergenic 30.0%
GAATTTGATTAGGTTATGAC+GGG + chr8_4:4647332-4647351 None:intergenic 30.0%
CGAATTTGATTAGGTTATGA+CGG + chr8_4:4647333-4647352 None:intergenic 30.0%
AAACTATCGCGAATTTGATT+AGG + chr8_4:4647342-4647361 None:intergenic 30.0%
!!! CACTTGCTAGTTTCTTTTTT+AGG - chr8_4:4647470-4647489 Msa1308380:intron 30.0%
TGCATTATCCTTCATTTAAG+GGG - chr8_4:4647852-4647871 Msa1308380:intron 30.0%
TTAAACCATGAAGGACAAAA+CGG + chr8_4:4648008-4648027 None:intergenic 30.0%
GCACTACATGATTAAAGTTA+AGG - chr8_4:4648223-4648242 Msa1308380:intron 30.0%
! AACATAGATTTTGAACCTGT+TGG + chr8_4:4648391-4648410 None:intergenic 30.0%
TTCACTTATTATACACTAGC+TGG - chr8_4:4648546-4648565 Msa1308380:intron 30.0%
!! TGAGCACAACATAATTTGTT+TGG + chr8_4:4649049-4649068 None:intergenic 30.0%
!! GTAAATTTTGGCCCAAAAAA+TGG - chr8_4:4649423-4649442 Msa1308380:intron 30.0%
TGCAACATAAGTGATATTTG+AGG - chr8_4:4649516-4649535 Msa1308380:intron 30.0%
GCAACATAAGTGATATTTGA+GGG - chr8_4:4649517-4649536 Msa1308380:intron 30.0%
TTTGGTAAGCGTGATAAAAT+AGG - chr8_4:4649564-4649583 Msa1308380:CDS 30.0%
TTGGTAAGCGTGATAAAATA+GGG - chr8_4:4649565-4649584 Msa1308380:CDS 30.0%
!!! ATGTTTTGGGATGATATCTT+AGG + chr8_4:4649655-4649674 None:intergenic 30.0%
!! AATGATGGGAATGTTTTGAA+AGG + chr8_4:4649719-4649738 None:intergenic 30.0%
!! AAGCTTCTTGTTTCACTTTT+CGG + chr8_4:4650039-4650058 None:intergenic 30.0%
ACTCCTCAATTAATCTCAAT+TGG - chr8_4:4650061-4650080 Msa1308380:five_prime_UTR 30.0%
! TCTTTATTTCCAAGGTGAAT+TGG + chr8_4:4650088-4650107 None:intergenic 30.0%
! GTTGAAGTTCTTTATTTCCA+AGG + chr8_4:4650096-4650115 None:intergenic 30.0%
!!! CTTTTTTTGTGTTGTTGCAT+TGG + chr8_4:4650118-4650137 None:intergenic 30.0%
CAATGCAACAACACAAAAAA+AGG - chr8_4:4650116-4650135 Msa1308380:five_prime_UTR 30.0%
! TTTTGTTAAGAAACCGTTCA+TGG - chr8_4:4650323-4650342 Msa1308380:five_prime_UTR 30.0%
ATTACATTCTAACACAAGCT+TGG - chr8_4:4650416-4650435 Msa1308380:five_prime_UTR 30.0%
AGATTCATCAGCACAAAAAA+AGG + chr8_4:4650490-4650509 None:intergenic 30.0%
! TATTTTGTGAGTGGCTTAAT+TGG - chr8_4:4650661-4650680 Msa1308380:five_prime_UTR 30.0%
AATCTATGAGCAATAACCAT+AGG - chr8_4:4650731-4650750 Msa1308380:five_prime_UTR 30.0%
!! TTAACGGATTTAGAAAAGAG+TGG - chr8_4:4650811-4650830 Msa1308380:five_prime_UTR 30.0%
CAGAGAAAATAACTCAGAAA+TGG + chr8_4:4650943-4650962 None:intergenic 30.0%
TGGTTCAAACATGAAAATGA+AGG + chr8_4:4650979-4650998 None:intergenic 30.0%
! ACACAACAGAATGTGTTTTA+AGG - chr8_4:4651040-4651059 Msa1308380:five_prime_UTR 30.0%
TTGATACTGACATTGTTCTA+GGG + chr8_4:4651076-4651095 None:intergenic 30.0%
AATCAACATCAACTTGTGTA+TGG + chr8_4:4651146-4651165 None:intergenic 30.0%
!! ACAAGTTGATGTTGATTTGT+TGG - chr8_4:4651149-4651168 Msa1308380:intron 30.0%
CATTGTTCGTAATATTGTAG+TGG + chr8_4:4651652-4651671 None:intergenic 30.0%
GAACAATGTTATGATGTTGA+AGG - chr8_4:4651664-4651683 Msa1308380:five_prime_UTR 30.0%
AAGATTATGTAATGAACGTG+AGG - chr8_4:4651704-4651723 Msa1308380:five_prime_UTR 30.0%
AGATTATGTAATGAACGTGA+GGG - chr8_4:4651705-4651724 Msa1308380:five_prime_UTR 30.0%
TCATGTGCATAAACCATTCT+AGG - chr8_4:4639474-4639493 Msa1308380:three_prime_UTR 35.0%
TTGAGAGTAACAAGAGTTGT+TGG + chr8_4:4639516-4639535 None:intergenic 35.0%
ACTCATAAGTGAGAGTTACA+CGG + chr8_4:4639618-4639637 None:intergenic 35.0%
AACTGTGAAATCTTGCTAGA+AGG - chr8_4:4639756-4639775 Msa1308380:CDS 35.0%
TTGATTATGTGCTGAATCTG+TGG + chr8_4:4640087-4640106 None:intergenic 35.0%
AACATAGGCTCAATGATTTC+TGG + chr8_4:4640114-4640133 None:intergenic 35.0%
CTTCATTCAACTTCAAGAGA+TGG + chr8_4:4640170-4640189 None:intergenic 35.0%
GGACCAATTGAGATAAACTT+TGG + chr8_4:4640204-4640223 None:intergenic 35.0%
TCTGGATTCTGACTATGAAA+AGG + chr8_4:4640225-4640244 None:intergenic 35.0%
TTTCCAAAAACTTCTCATCC+TGG + chr8_4:4640398-4640417 None:intergenic 35.0%
!! ATTTTGGAGGAATTACACAG+AGG - chr8_4:4640570-4640589 Msa1308380:CDS 35.0%
!! TTTTGGAGGAATTACACAGA+GGG - chr8_4:4640571-4640590 Msa1308380:CDS 35.0%
GAATGGTTGCAATAGCAATA+AGG - chr8_4:4640611-4640630 Msa1308380:CDS 35.0%
AAATCAGTGAAATGGTTGCA+AGG + chr8_4:4640738-4640757 None:intergenic 35.0%
GCTGTTCTTAGTACATATTC+TGG + chr8_4:4640837-4640856 None:intergenic 35.0%
CACAAAAACCAGCTCAAAAT+CGG + chr8_4:4640939-4640958 None:intergenic 35.0%
TAAGAACACATTCTGTTGCT+TGG + chr8_4:4641028-4641047 None:intergenic 35.0%
AAGCAACAGAATGTGTTCTT+AGG - chr8_4:4641027-4641046 Msa1308380:CDS 35.0%
CATAGTTGCATATGAAAGGT+TGG + chr8_4:4641088-4641107 None:intergenic 35.0%
! ACATGAAGATGTTGAGTTGT+TGG - chr8_4:4641136-4641155 Msa1308380:CDS 35.0%
GAAATCATTAGCCATGAACT+TGG - chr8_4:4641167-4641186 Msa1308380:CDS 35.0%
! GAATTGGCAACATTGGTTAA+TGG - chr8_4:4641200-4641219 Msa1308380:CDS 35.0%
TGGTCTTTGCAAATATGTTG+TGG - chr8_4:4641220-4641239 Msa1308380:intron 35.0%
GTGGTGACATCAAATTGTTA+TGG - chr8_4:4641239-4641258 Msa1308380:intron 35.0%
AGAGTTAGTTCAACTGTTGT+TGG - chr8_4:4641353-4641372 Msa1308380:intron 35.0%
! CATGTAAGTTGGAACATGTT+TGG - chr8_4:4641744-4641763 Msa1308380:intron 35.0%
GAGAGCTTAATTCGTATAGA+TGG + chr8_4:4641996-4642015 None:intergenic 35.0%
GAAAATTCAGGATCCATTGA+GGG + chr8_4:4642188-4642207 None:intergenic 35.0%
AGAAAATTCAGGATCCATTG+AGG + chr8_4:4642189-4642208 None:intergenic 35.0%
!! GCGCAAAAATTTTGGTAGTT+TGG + chr8_4:4642219-4642238 None:intergenic 35.0%
GTGTTAATCCTCAAGTTCTT+AGG - chr8_4:4642281-4642300 Msa1308380:intron 35.0%
CTCAAGTTCTTAGGAGAAAA+CGG - chr8_4:4642290-4642309 Msa1308380:intron 35.0%
TCAAGTTCTTAGGAGAAAAC+GGG - chr8_4:4642291-4642310 Msa1308380:intron 35.0%
TTGATATCAATGCAAAGTCG+TGG - chr8_4:4642506-4642525 Msa1308380:intron 35.0%
TGATATCAATGCAAAGTCGT+GGG - chr8_4:4642507-4642526 Msa1308380:intron 35.0%
!! ATACGCCTCATTTTGTTATG+AGG - chr8_4:4642581-4642600 Msa1308380:intron 35.0%
CGGACCTAGACTTTAAATAT+TGG - chr8_4:4642938-4642957 Msa1308380:intron 35.0%
GCACAATAGCAAAAATGGTT+TGG - chr8_4:4643020-4643039 Msa1308380:intron 35.0%
! TGTATTCTTAATTGGCCTAG+TGG + chr8_4:4643079-4643098 None:intergenic 35.0%
AATAGCCACACTATGTGTTA+TGG - chr8_4:4643175-4643194 Msa1308380:intron 35.0%
AAGCACACTAACCCATTATT+GGG - chr8_4:4643261-4643280 Msa1308380:intron 35.0%
CAGAAATGGGGGAAATAATT+GGG + chr8_4:4643454-4643473 None:intergenic 35.0%
TCAGAAATGGGGGAAATAAT+TGG + chr8_4:4643455-4643474 None:intergenic 35.0%
AATAAGTGATGTGTAACGTG+AGG - chr8_4:4643899-4643918 Msa1308380:intron 35.0%
ATTGTGGATGCTAAAACTAG+TGG - chr8_4:4643954-4643973 Msa1308380:intron 35.0%
CTTCTTAACAAGTACCTTGA+GGG + chr8_4:4643995-4644014 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - chr8_4:4644532-4644551 Msa1308380:intron 35.0%
CCAAAGTAGGTCAATTAAAC+CGG - chr8_4:4644545-4644564 Msa1308380:intron 35.0%
CAAAGTAGGTCAATTAAACC+GGG - chr8_4:4644546-4644565 Msa1308380:intron 35.0%
TTAATGCCCTATCTACTTAC+TGG + chr8_4:4644695-4644714 None:intergenic 35.0%
! TTTTCATGCAGAAATGGTTG+GGG + chr8_4:4644751-4644770 None:intergenic 35.0%
! CTTTTCATGCAGAAATGGTT+GGG + chr8_4:4644752-4644771 None:intergenic 35.0%
! ACTTTTCATGCAGAAATGGT+TGG + chr8_4:4644753-4644772 None:intergenic 35.0%
AAAATTATGTGTTGTGGGAC+GGG + chr8_4:4645359-4645378 None:intergenic 35.0%
GAATACAAACATTCCAGAGT+TGG - chr8_4:4645572-4645591 Msa1308380:intron 35.0%
CTATAATGAAACATGAGTGG+TGG + chr8_4:4645619-4645638 None:intergenic 35.0%
CACCACTCATGTTTCATTAT+AGG - chr8_4:4645617-4645636 Msa1308380:intron 35.0%
CCACTCATGTTTCATTATAG+GGG - chr8_4:4645619-4645638 Msa1308380:intron 35.0%
TATAGGGGTAATAGTCACTT+TGG - chr8_4:4645634-4645653 Msa1308380:intron 35.0%
!!! TGTCTTGTTGTTTCTCGTTT+TGG - chr8_4:4646030-4646049 Msa1308380:intron 35.0%
!!! GTCTTGTTGTTTCTCGTTTT+GGG - chr8_4:4646031-4646050 Msa1308380:intron 35.0%
!!! TCTTGTTGTTTCTCGTTTTG+GGG - chr8_4:4646032-4646051 Msa1308380:intron 35.0%
CAAATAATTGCACTCAGTGT+GGG - chr8_4:4646376-4646395 Msa1308380:intron 35.0%
AAATAATTGCACTCAGTGTG+GGG - chr8_4:4646377-4646396 Msa1308380:intron 35.0%
GCAATACTTTCCATCAATGA+TGG - chr8_4:4646490-4646509 Msa1308380:intron 35.0%
!! TTAAGTTGAGCCATCATTGA+TGG + chr8_4:4646503-4646522 None:intergenic 35.0%
TATGTAGTTCACATGAGGTA+TGG + chr8_4:4646694-4646713 None:intergenic 35.0%
CTACATAATATGGAGAGTGA+AGG - chr8_4:4646707-4646726 Msa1308380:intron 35.0%
TAATAAATGCTCCAGAGCAA+GGG - chr8_4:4646754-4646773 Msa1308380:intron 35.0%
TTACGTATATCTGATGAGGT+GGG + chr8_4:4646842-4646861 None:intergenic 35.0%
TTGCTTACGTATATCTGATG+AGG + chr8_4:4646846-4646865 None:intergenic 35.0%
ATTAAGATGGAAAGAAGCCA+TGG - chr8_4:4647021-4647040 Msa1308380:intron 35.0%
TATGTCAGTAGCGATCATAA+TGG + chr8_4:4647244-4647263 None:intergenic 35.0%
ATTTGATTAGGTTATGACGG+GGG + chr8_4:4647330-4647349 None:intergenic 35.0%
! TAGCAAGTGTACTAGTTTGT+CGG + chr8_4:4647434-4647453 None:intergenic 35.0%
CCTTCATTTAAGGGGATTAA+CGG - chr8_4:4647860-4647879 Msa1308380:intron 35.0%
CTTCATTTAAGGGGATTAAC+GGG - chr8_4:4647861-4647880 Msa1308380:intron 35.0%
TTCATTTAAGGGGATTAACG+GGG - chr8_4:4647862-4647881 Msa1308380:intron 35.0%
ATTAACGGGGATTTAAACTC+AGG - chr8_4:4647875-4647894 Msa1308380:intron 35.0%
! AACGTTTGTCTTTTAACCAC+CGG - chr8_4:4647911-4647930 Msa1308380:intron 35.0%
ATTTGTCACCAGGTATACTA+TGG + chr8_4:4648329-4648348 None:intergenic 35.0%
! TAGATTTTGAACCTGTTGGT+TGG + chr8_4:4648387-4648406 None:intergenic 35.0%
TGCATGTGATTGTTCACTTT+AGG - chr8_4:4648638-4648657 Msa1308380:intron 35.0%
ATTGTTCACTTTAGGCCATT+TGG - chr8_4:4648646-4648665 Msa1308380:intron 35.0%
TTGTTCACTTTAGGCCATTT+GGG - chr8_4:4648647-4648666 Msa1308380:intron 35.0%
TACCAATTACCAAGTCATGA+AGG - chr8_4:4648707-4648726 Msa1308380:intron 35.0%
!! ATCCTTCATGACTTGGTAAT+TGG + chr8_4:4648712-4648731 None:intergenic 35.0%
GGTTTAAATCCTTCATGACT+TGG + chr8_4:4648719-4648738 None:intergenic 35.0%
TGTTTCGTTAACTAATGCTC+TGG + chr8_4:4648804-4648823 None:intergenic 35.0%
!! TATTTTTGCCCCCAAAATGA+TGG - chr8_4:4649379-4649398 Msa1308380:intron 35.0%
TTGAGGGACCAAAAAGTTTA+AGG - chr8_4:4649533-4649552 Msa1308380:intron 35.0%
TGGTAAGCGTGATAAAATAG+GGG - chr8_4:4649566-4649585 Msa1308380:CDS 35.0%
! TTTGGGATGATATCTTAGGT+CGG + chr8_4:4649651-4649670 None:intergenic 35.0%
!!! ATGGGAATGTTTTGAAAGGT+AGG + chr8_4:4649715-4649734 None:intergenic 35.0%
CTGCTAAACTTAACTCTTCT+AGG + chr8_4:4649985-4650004 None:intergenic 35.0%
GGACCAATTGAGATTAATTG+AGG + chr8_4:4650067-4650086 None:intergenic 35.0%
ATAGACGCTCATAGAAGAAA+TGG + chr8_4:4650147-4650166 None:intergenic 35.0%
GACTTTGTAGTTCTTGATCA+TGG + chr8_4:4650188-4650207 None:intergenic 35.0%
AAGAAACCGTTCATGGAAAT+CGG - chr8_4:4650330-4650349 Msa1308380:five_prime_UTR 35.0%
ATGTATCCGATTTCCATGAA+CGG + chr8_4:4650339-4650358 None:intergenic 35.0%
!!! CTTCTTTTTTGTCGTCGTTA+GGG + chr8_4:4650528-4650547 None:intergenic 35.0%
!!! TCTTCTTTTTTGTCGTCGTT+AGG + chr8_4:4650529-4650548 None:intergenic 35.0%
!! ACGTGAAACTAAGCTTGTTT+TGG - chr8_4:4650615-4650634 Msa1308380:five_prime_UTR 35.0%
AGCAATAACCATAGGTTTCA+AGG - chr8_4:4650739-4650758 Msa1308380:five_prime_UTR 35.0%
! TTACCTTCCAGCTGATTTAA+CGG - chr8_4:4650795-4650814 Msa1308380:five_prime_UTR 35.0%
TCTAAATCCGTTAAATCAGC+TGG + chr8_4:4650805-4650824 None:intergenic 35.0%
!!! TGTGAGTTTTGAGAAAGTTG+TGG - chr8_4:4650882-4650901 Msa1308380:five_prime_UTR 35.0%
!!! GTGAGTTTTGAGAAAGTTGT+GGG - chr8_4:4650883-4650902 Msa1308380:five_prime_UTR 35.0%
!!! TGAGTTTTGAGAAAGTTGTG+GGG - chr8_4:4650884-4650903 Msa1308380:five_prime_UTR 35.0%
!! CTGAGTTATTTTCTCTGCTT+AGG - chr8_4:4650946-4650965 Msa1308380:five_prime_UTR 35.0%
CTTGATACTGACATTGTTCT+AGG + chr8_4:4651077-4651096 None:intergenic 35.0%
GAAGTGATTGTGCATGAAAT+GGG - chr8_4:4651180-4651199 Msa1308380:intron 35.0%
AATGGGAAGTGATAAAGAAG+TGG - chr8_4:4651197-4651216 Msa1308380:intron 35.0%
TGGTCTTTGTAAACATGTTG+TGG - chr8_4:4651233-4651252 Msa1308380:intron 35.0%
!! TGGTGTATTTTAGAGATGCT+TGG - chr8_4:4651343-4651362 Msa1308380:intron 35.0%
! TTTCTAGTAGAAGAGATCTC+TGG + chr8_4:4651436-4651455 None:intergenic 35.0%
GATTATGTAATGAACGTGAG+GGG - chr8_4:4651706-4651725 Msa1308380:five_prime_UTR 35.0%
AGAGTAACAAGAGTTGTTGG+TGG + chr8_4:4639513-4639532 None:intergenic 40.0%
TTCAACTTCAAGAGATGGTG+AGG + chr8_4:4640165-4640184 None:intergenic 40.0%
TTCCAAACAAGAACTTTGCC+AGG - chr8_4:4640377-4640396 Msa1308380:CDS 40.0%
ATCCTGGCAAAGTTCTTGTT+TGG + chr8_4:4640382-4640401 None:intergenic 40.0%
! TTGCCAGGATGAGAAGTTTT+TGG - chr8_4:4640392-4640411 Msa1308380:CDS 40.0%
TTTGGAGGAATTACACAGAG+GGG - chr8_4:4640572-4640591 Msa1308380:CDS 40.0%
!!! TTGAGCTGGTTTTTGTGCTT+AGG - chr8_4:4640942-4640961 Msa1308380:CDS 40.0%
CTTGGTCTACATTCAAATGC+GGG + chr8_4:4641010-4641029 None:intergenic 40.0%
GCTTGGTCTACATTCAAATG+CGG + chr8_4:4641011-4641030 None:intergenic 40.0%
GACATTGTTCGAACGCAATT+AGG + chr8_4:4641055-4641074 None:intergenic 40.0%
ACTTGGAAGTCATGCAGAAT+TGG - chr8_4:4641184-4641203 Msa1308380:CDS 40.0%
TCATGCAGAATTGGCAACAT+TGG - chr8_4:4641193-4641212 Msa1308380:CDS 40.0%
! CAGTGTATTTTCGTGATCCT+TGG - chr8_4:4641330-4641349 Msa1308380:intron 40.0%
ACAGTTGAACTAACTCTCCA+AGG + chr8_4:4641350-4641369 None:intergenic 40.0%
AAAGTACAGCAGACAAATGC+TGG - chr8_4:4641613-4641632 Msa1308380:intron 40.0%
TGATTCTTTCATCGTTAGCC+AGG + chr8_4:4641683-4641702 None:intergenic 40.0%
! AGTGTTGGATTTCGATGCAT+CGG - chr8_4:4641823-4641842 Msa1308380:intron 40.0%
!! CAGTGGCACACTTATTTTCT+AGG + chr8_4:4641924-4641943 None:intergenic 40.0%
AAATGCAAGAAAACGTGAGG+TGG + chr8_4:4642067-4642086 None:intergenic 40.0%
GTGAAATGCAAGAAAACGTG+AGG + chr8_4:4642070-4642089 None:intergenic 40.0%
! GTGCGATTGCGCAAAAATTT+TGG + chr8_4:4642227-4642246 None:intergenic 40.0%
! CGTTTTCTCCTAAGAACTTG+AGG + chr8_4:4642292-4642311 None:intergenic 40.0%
GATATCAATGCAAAGTCGTG+GGG - chr8_4:4642508-4642527 Msa1308380:intron 40.0%
TTACATCTTATGACCAGAGG+CGG - chr8_4:4642918-4642937 Msa1308380:intron 40.0%
! TAGCAAAAATGGTTTGGACG+TGG - chr8_4:4643026-4643045 Msa1308380:intron 40.0%
! TACAAGCGTTTTCTACCACT+AGG - chr8_4:4643061-4643080 Msa1308380:intron 40.0%
ATCCACCATAACACATAGTG+TGG + chr8_4:4643183-4643202 None:intergenic 40.0%
! AGTTTGATGGGTCATAAGCT+GGG + chr8_4:4643210-4643229 None:intergenic 40.0%
! AAGTTTGATGGGTCATAAGC+TGG + chr8_4:4643211-4643230 None:intergenic 40.0%
CAAGCACACTAACCCATTAT+TGG - chr8_4:4643260-4643279 Msa1308380:intron 40.0%
AGCACACTAACCCATTATTG+GGG - chr8_4:4643262-4643281 Msa1308380:intron 40.0%
CCAAATGCTACCCCAATAAT+GGG + chr8_4:4643275-4643294 None:intergenic 40.0%
CCATTATTGGGGTAGCATTT+GGG - chr8_4:4643273-4643292 Msa1308380:intron 40.0%
! TTTGGGACCATTGGTACTAT+TGG + chr8_4:4643420-4643439 None:intergenic 40.0%
AATAGTACCAATGGTCCCAA+AGG - chr8_4:4643419-4643438 Msa1308380:intron 40.0%
! GGGAAATAATTGGGTGTCAT+CGG + chr8_4:4643445-4643464 None:intergenic 40.0%
TGTAACGTGAGGTCCATTTA+AGG - chr8_4:4643910-4643929 Msa1308380:intron 40.0%
GCTTCTTAACAAGTACCTTG+AGG + chr8_4:4643996-4644015 None:intergenic 40.0%
CCGGTTTAATTGACCTACTT+TGG + chr8_4:4644548-4644567 None:intergenic 40.0%
TAATGCGCCAGTAAGTAGAT+AGG - chr8_4:4644685-4644704 Msa1308380:intron 40.0%
AATGCGCCAGTAAGTAGATA+GGG - chr8_4:4644686-4644705 Msa1308380:intron 40.0%
TTAAATGGGACGATTTCACG+TGG - chr8_4:4644711-4644730 Msa1308380:intron 40.0%
GTCATCTAATATGGGAGTGA+TGG + chr8_4:4644780-4644799 None:intergenic 40.0%
CCCCTATAATGAAACATGAG+TGG + chr8_4:4645622-4645641 None:intergenic 40.0%
! GACTACTTGCTACACATTCA+GGG + chr8_4:4645661-4645680 None:intergenic 40.0%
! TGACTACTTGCTACACATTC+AGG + chr8_4:4645662-4645681 None:intergenic 40.0%
ACTAACAAAGTGGGCAATCA+GGG + chr8_4:4645721-4645740 None:intergenic 40.0%
AACTAACAAAGTGGGCAATC+AGG + chr8_4:4645722-4645741 None:intergenic 40.0%
GACTATTCGTTCCTCATTCA+AGG - chr8_4:4645944-4645963 Msa1308380:intron 40.0%
! GTCACTTTAGTCCTTGAATG+AGG + chr8_4:4645958-4645977 None:intergenic 40.0%
!!! GTTTCTCGTTTTGGGGTTTT+AGG - chr8_4:4646039-4646058 Msa1308380:intron 40.0%
AGAAAGAGGTTCCGATAACT+CGG - chr8_4:4646126-4646145 Msa1308380:intron 40.0%
GCAAATAATTGCACTCAGTG+TGG - chr8_4:4646375-4646394 Msa1308380:intron 40.0%
AATATGGAGAGTGAAGGAAG+AGG - chr8_4:4646713-4646732 Msa1308380:intron 40.0%
CTAATAAATGCTCCAGAGCA+AGG - chr8_4:4646753-4646772 Msa1308380:intron 40.0%
TGAGGTGGGATGAGATTATA+TGG + chr8_4:4646828-4646847 None:intergenic 40.0%
CTTACGTATATCTGATGAGG+TGG + chr8_4:4646843-4646862 None:intergenic 40.0%
ACAAAGTTGTCTAATTCCGG+TGG + chr8_4:4647051-4647070 None:intergenic 40.0%
CTATGCCCCAAACTTAATCA+AGG + chr8_4:4647103-4647122 None:intergenic 40.0%
! AGTTTGGGGCATAGTCATTA+CGG - chr8_4:4647109-4647128 Msa1308380:intron 40.0%
! TTAGGCAGTAGTTGACTCAA+TGG + chr8_4:4647174-4647193 None:intergenic 40.0%
TTTCGCATCGTGAGAATGAT+AGG - chr8_4:4647214-4647233 Msa1308380:intron 40.0%
GCGATAGTTTAGTTGAAGCT+AGG - chr8_4:4647352-4647371 Msa1308380:intron 40.0%
CCGTTAATCCCCTTAAATGA+AGG + chr8_4:4647863-4647882 None:intergenic 40.0%
TAAACTTCAAGTGTCACGTC+CGG + chr8_4:4647933-4647952 None:intergenic 40.0%
! AAAGACCGTTTTGTCCTTCA+TGG - chr8_4:4648000-4648019 Msa1308380:intron 40.0%
TGATTAAAGTTAAGGGGCAG+TGG - chr8_4:4648231-4648250 Msa1308380:intron 40.0%
GAACACAACCATAGTATACC+TGG - chr8_4:4648318-4648337 Msa1308380:intron 40.0%
CTTGAGCAATATTTGTCACC+AGG + chr8_4:4648339-4648358 None:intergenic 40.0%
ATTCCTATCTACCAACCAAC+AGG - chr8_4:4648373-4648392 Msa1308380:intron 40.0%
TCACTGATGAGTATCCCAAA+TGG + chr8_4:4648664-4648683 None:intergenic 40.0%
ACAACTACAGACACATCAAG+AGG + chr8_4:4648740-4648759 None:intergenic 40.0%
!! AACTAATGCTCTGGAACCAT+TGG + chr8_4:4648795-4648814 None:intergenic 40.0%
ATCGCAAACTGCAATGTAGA+CGG - chr8_4:4649003-4649022 Msa1308380:intron 40.0%
! AGGGGGAAAACCATCATTTT+GGG + chr8_4:4649392-4649411 None:intergenic 40.0%
! TAGGGGGAAAACCATCATTT+TGG + chr8_4:4649393-4649412 None:intergenic 40.0%
AAATGATCCTCACATGTCAC+AGG - chr8_4:4649866-4649885 Msa1308380:five_prime_UTR 40.0%
AATGATCCTCACATGTCACA+GGG - chr8_4:4649867-4649886 Msa1308380:five_prime_UTR 40.0%
! ATTTTTCCCTGTGACATGTG+AGG + chr8_4:4649876-4649895 None:intergenic 40.0%
AGCAGATTGTAGCATCTACA+AGG - chr8_4:4650000-4650019 Msa1308380:five_prime_UTR 40.0%
!! TTCACTTTTCGGAGATTGTG+AGG + chr8_4:4650028-4650047 None:intergenic 40.0%
TCAATTGGTCCAATTCACCT+TGG - chr8_4:4650076-4650095 Msa1308380:five_prime_UTR 40.0%
!!! GTTGGATGCTGTTTTCATCA+TGG - chr8_4:4650297-4650316 Msa1308380:five_prime_UTR 40.0%
! CACAAGGGACTTGATTTTGT+TGG - chr8_4:4650453-4650472 Msa1308380:five_prime_UTR 40.0%
!! AGTGGCTTAATTGGTGATGT+TGG - chr8_4:4650670-4650689 Msa1308380:five_prime_UTR 40.0%
!! TTAATTGGTGATGTTGGTGG+TGG - chr8_4:4650676-4650695 Msa1308380:five_prime_UTR 40.0%
! GTTTAGGACCTTGAAACCTA+TGG + chr8_4:4650750-4650769 None:intergenic 40.0%
AATCCGTTAAATCAGCTGGA+AGG + chr8_4:4650801-4650820 None:intergenic 40.0%
TCTAAGGATTCCGCAATTGA+AGG - chr8_4:4651011-4651030 Msa1308380:five_prime_UTR 40.0%
GTGTGATCAACCTTCAATTG+CGG + chr8_4:4651024-4651043 None:intergenic 40.0%
!! TGTTGATTTGTTGGTCGAGA+AGG - chr8_4:4651158-4651177 Msa1308380:intron 40.0%
GGAAGTGATTGTGCATGAAA+TGG - chr8_4:4651179-4651198 Msa1308380:intron 40.0%
! GAATATTTGGAACCGTACCA+TGG - chr8_4:4651308-4651327 Msa1308380:intron 40.0%
!! TTGGAGAGCTAGTTCTACTT+TGG - chr8_4:4651362-4651381 Msa1308380:intron 40.0%
!! AGAGCTAGTTCTACTTTGGT+TGG - chr8_4:4651366-4651385 Msa1308380:intron 40.0%
! TAATGAACGTGAGGGGTTTT+AGG - chr8_4:4651713-4651732 Msa1308380:five_prime_UTR 40.0%
GCTACAAAGTTGAGTGAAGC+AGG - chr8_4:4640855-4640874 Msa1308380:CDS 45.0%
CTGCATGACTTCCAAGTTCA+TGG + chr8_4:4641181-4641200 None:intergenic 45.0%
CATTGAGGGAAAATGAGACG+AGG + chr8_4:4642174-4642193 None:intergenic 45.0%
! CTCGTCTCATTTTCCCTCAA+TGG - chr8_4:4642172-4642191 Msa1308380:intron 45.0%
! AAATGGTTTGGACGTGGACA+TGG - chr8_4:4643032-4643051 Msa1308380:intron 45.0%
AGCCACACTATGTGTTATGG+TGG - chr8_4:4643178-4643197 Msa1308380:intron 45.0%
CCCATTATTGGGGTAGCATT+TGG - chr8_4:4643272-4643291 Msa1308380:intron 45.0%
CCCAAATGCTACCCCAATAA+TGG + chr8_4:4643276-4643295 None:intergenic 45.0%
AATGCTAACAAGTGCCCTCA+AGG - chr8_4:4643978-4643997 Msa1308380:intron 45.0%
GTAGGTCAATTAAACCGGGA+CGG - chr8_4:4644550-4644569 Msa1308380:intron 45.0%
! GTGGTGGAAGTTATCTAGTG+TGG + chr8_4:4645603-4645622 None:intergenic 45.0%
TCAGGGAAACTCCGAGTTAT+CGG + chr8_4:4646140-4646159 None:intergenic 45.0%
! CATGAGAGCACATACTCACT+AGG + chr8_4:4646655-4646674 None:intergenic 45.0%
AAGAAGCCATGGAAATCCAC+CGG - chr8_4:4647032-4647051 Msa1308380:intron 45.0%
! CTAATTCCGGTGGATTTCCA+TGG + chr8_4:4647041-4647060 None:intergenic 45.0%
!! GAACCTGTTGGTTGGTAGAT+AGG + chr8_4:4648379-4648398 None:intergenic 45.0%
CTACATTGCAGTTTGCGATG+TGG + chr8_4:4649002-4649021 None:intergenic 45.0%
! GGGGAAAACCATCATTTTGG+GGG + chr8_4:4649390-4649409 None:intergenic 45.0%
! GGGGGAAAACCATCATTTTG+GGG + chr8_4:4649391-4649410 None:intergenic 45.0%
GATGATATCTTAGGTCGGCT+GGG + chr8_4:4649646-4649665 None:intergenic 45.0%
!! GCTCAGCAAAAGCATCACAA+GGG - chr8_4:4650438-4650457 Msa1308380:five_prime_UTR 45.0%
!! GGCTTAATTGGTGATGTTGG+TGG - chr8_4:4650673-4650692 Msa1308380:five_prime_UTR 45.0%
ACCATTTCAAAGCGCGTCTA+AGG - chr8_4:4650995-4651014 Msa1308380:five_prime_UTR 45.0%
!! TCCTTAGACGCGCTTTGAAA+TGG + chr8_4:4650999-4651018 None:intergenic 45.0%
!! GACATTGTTCTAGGGCAATG+AGG + chr8_4:4651068-4651087 None:intergenic 45.0%
! GAAGTGGCAGTGCTTGTTAA+TGG - chr8_4:4651213-4651232 Msa1308380:intron 45.0%
!!! TATTTAAAATGAAATTTAAT+TGG - chr8_4:4642391-4642410 Msa1308380:intron 5.0%
!!! AATAAATTATTTTTGTTTAA+TGG - chr8_4:4643764-4643783 Msa1308380:intron 5.0%
!!! TAATAAAAGTATTTTTATTA+AGG + chr8_4:4643869-4643888 None:intergenic 5.0%
!!! AATTTTAAAATAGAAATAAT+TGG + chr8_4:4644102-4644121 None:intergenic 5.0%
!!! ATAATATATTTTTTTTTTGA+GGG - chr8_4:4646590-4646609 Msa1308380:intron 5.0%
!!! AGAAGACGCCGATTTTGAGC+TGG - chr8_4:4640928-4640947 Msa1308380:CDS 50.0%
GTCACGATCAATGACAGCAG+TGG + chr8_4:4641941-4641960 None:intergenic 50.0%
TTAAAGTCTAGGTCCGCCTC+TGG + chr8_4:4642934-4642953 None:intergenic 50.0%
! TGATGGGTCATAAGCTGGGA+CGG + chr8_4:4643206-4643225 None:intergenic 50.0%
! ATTGGGTGTCATCGGCCTTT+GGG + chr8_4:4643437-4643456 None:intergenic 50.0%
! AATTGGGTGTCATCGGCCTT+TGG + chr8_4:4643438-4643457 None:intergenic 50.0%
GTCAATTAAACCGGGACGGA+GGG - chr8_4:4644554-4644573 Msa1308380:intron 50.0%
CAGAAATGGTTGGGGTGAGA+AGG + chr8_4:4644743-4644762 None:intergenic 50.0%
TAGTGTGGTAGCTCCAACTC+TGG + chr8_4:4645588-4645607 None:intergenic 50.0%
AGAAGGAACATCCCTTGCTC+TGG + chr8_4:4646768-4646787 None:intergenic 50.0%
ACAAGGGTCTTGCTGACCAA+TGG - chr8_4:4648776-4648795 Msa1308380:intron 50.0%
GGATGATATCTTAGGTCGGC+TGG + chr8_4:4649647-4649666 None:intergenic 50.0%
!! GGCTCAGCAAAAGCATCACA+AGG - chr8_4:4650437-4650456 Msa1308380:five_prime_UTR 50.0%
ACCACAATGCAGCCATGGTA+CGG + chr8_4:4651323-4651342 None:intergenic 50.0%
TACCATGGCTGCATTGTGGT+TGG - chr8_4:4651323-4651342 Msa1308380:intron 50.0%
!! TCATCGGCCTTTGGGACCAT+TGG + chr8_4:4643429-4643448 None:intergenic 55.0%
CAATACTACTCCCTCCGTCC+CGG - chr8_4:4644341-4644360 Msa1308380:intron 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr8_4:4644354-4644373 None:intergenic 55.0%
GGTCAATTAAACCGGGACGG+AGG - chr8_4:4644553-4644572 Msa1308380:intron 55.0%
ATGATGTACTCCCTCCGTCC+CGG + chr8_4:4644567-4644586 None:intergenic 55.0%
CTACTGCCTAACTCACGTCG+CGG - chr8_4:4647183-4647202 Msa1308380:intron 55.0%
TACTGCCTAACTCACGTCGC+GGG - chr8_4:4647184-4647203 Msa1308380:intron 55.0%
TATAGCCCGCGACGTGAGTT+AGG + chr8_4:4647192-4647211 None:intergenic 55.0%
ACTTCAAGTGTCACGTCCGG+TGG + chr8_4:4647930-4647949 None:intergenic 55.0%
ACCGTACCATGGCTGCATTG+TGG - chr8_4:4651319-4651338 Msa1308380:intron 55.0%
CACCAACCACAATGCAGCCA+TGG + chr8_4:4651328-4651347 None:intergenic 55.0%
GGTCAGTTATTCCGGGACGG+AGG + chr8_4:4644355-4644374 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 4639376 4651742 4639376 ID=Msa1308380;Name=Msa1308380
chr8_4 mRNA 4639376 4651742 4639376 ID=Msa1308380-mRNA-1;Parent=Msa1308380;Name=Msa1308380-mRNA-1;_AED=0.04;_eAED=0.04;_QI=1592|0.5|0.66|1|0|0|3|290|543
chr8_4 exon 4639376 4641230 4639376 ID=Msa1308380-mRNA-1:exon:1400;Parent=Msa1308380-mRNA-1
chr8_4 exon 4649544 4651082 4649544 ID=Msa1308380-mRNA-1:exon:1399;Parent=Msa1308380-mRNA-1
chr8_4 exon 4651623 4651742 4651623 ID=Msa1308380-mRNA-1:exon:1398;Parent=Msa1308380-mRNA-1
chr8_4 five_prime_UTR 4651623 4651742 4651623 ID=Msa1308380-mRNA-1:five_prime_utr;Parent=Msa1308380-mRNA-1
chr8_4 five_prime_UTR 4649611 4651082 4649611 ID=Msa1308380-mRNA-1:five_prime_utr;Parent=Msa1308380-mRNA-1
chr8_4 CDS 4649544 4649610 4649544 ID=Msa1308380-mRNA-1:cds;Parent=Msa1308380-mRNA-1
chr8_4 CDS 4639666 4641230 4639666 ID=Msa1308380-mRNA-1:cds;Parent=Msa1308380-mRNA-1
chr8_4 three_prime_UTR 4639376 4639665 4639376 ID=Msa1308380-mRNA-1:three_prime_utr;Parent=Msa1308380-mRNA-1
Gene Sequence

>Msa1308380

ATGAATTATATTATTAGTTTCTGGAGTTATATGTTATGTAATGTTAACATGATCATTGGATATACAAGGAAAAATAATATTATGGCACATGCTAATACTTCTGTTGATGCTTTATCTGAAACTGAATATGAAATGGTGAAACACATCATTGACGTTGAAGTCCTAGAAGAGTTAAGTTTAGCAGATTGTAGCATCTACAAGGTTCCTCACAATCTCCGAAAAGTGAAACAAGAAGCTTACACTCCTCAATTAATCTCAATTGGTCCAATTCACCTTGGAAATAAAGAACTTCAACCAATGCAACAACACAAAAAAAGGTATTTCCATTTCTTCTATGAGCGTCTATCTCAATTCAATCAACAATCCATGATCAAGAACTACAAAGTCTATCTTGAAAACAAAGAACAAGAAATAAGAAAATGTTATGCAGAGAAATTTCCCAACATAAGCAAAGAAAAATTTGTGGAAACAATTTTGTTGGATGCTGTTTTCATCATGGAGCTTTTGTTAAGAAACCGTTCATGGAAATCGGATACATCAAAACATGAACATGAATACAAGCAATCCAAGTCATTTAGATTGAAACATAGTGATGATTACATTCTAACACAAGCTTGGCTCAGCAAAAGCATCACAAGGGACTTGATTTTGTTGGAAAATCAGATACCTTTTTTTGTGCTGATGAATCTTTACGATACTGTCGTCCCTAACGACGACAAAAAAGAAGACCATAAAAGTTTTCTTGATCTTGCACTTGAGTATTTTGCATTCTACGACACTCAGAAATCGTCATCACGTGAAACTAAGCTTGTTTTGGATAAGAATCAGACAAAGAAATATTATTTTGTGAGTGGCTTAATTGGTGATGTTGGTGGTGGTAATTCAGTTTCCAAGAAAAAACATTCTGATAAATCTATGAGCAATAACCATAGGTTTCAAGGTCCTAAACATTTCACTGATTTGATAAGGTTTTTTTACCTTCCAGCTGATTTAACGGATTTAGAAAAGAGTGGTTGTTCTCATACTTTTCCAAGAACAGTAACAAAGTTAATAGATTCTGGTGTGAGTTTTGAGAAAGTTGTGGGGAGAAGATTGCTAGAAATAACATTTGAGAAGAAACCATTTCTGAGTTATTTTCTCTGCTTAGGTTGTTTACCTTCATTTTCATGTTTGAACCATTTCAAAGCGCGTCTAAGGATTCCGCAATTGAAGGTTGATCACACAACAGAATGTGTTTTAAGGAACCTCATTGCCCTAGAACAATGTCAGTATCAAGAACAACCTTATATATGCAATTATGTTTCACTTGTTGATTCTCTTATCCATACACAAGTTGATGTTGATTTGTTGGTCGAGAAGGAAGTGATTGTGCATGAAATGGGAAGTGATAAAGAAGTGGCAGTGCTTGTTAATGGTCTTTGTAAACATGTTGTGGTGAATTCAACTTGTTACTATGATATTATTAATGAGCTTAATAAGCATTATCAGAATATTTGGAACCGTACCATGGCTGCATTGTGGTTGGTGTATTTTAGAGATGCTTGGAGAGCTAGTTCTACTTTGGTTGGAATTGCTTTTCTTGTTTACACAGCATTCAACTTTGTACGTCTTGCCAGAGATCTCTTCTACTAG
Protein sequence

>Msa1308380

MNYIISFWSYMLCNVNMIIGYTRKNNIMAHANTSVDALSETEYEMVKHIIDVEVLEELSLADCSIYKVPHNLRKVKQEAYTPQLISIGPIHLGNKELQPMQQHKKRYFHFFYERLSQFNQQSMIKNYKVYLENKEQEIRKCYAEKFPNISKEKFVETILLDAVFIMELLLRNRSWKSDTSKHEHEYKQSKSFRLKHSDDYILTQAWLSKSITRDLILLENQIPFFVLMNLYDTVVPNDDKKEDHKSFLDLALEYFAFYDTQKSSSRETKLVLDKNQTKKYYFVSGLIGDVGGGNSVSKKKHSDKSMSNNHRFQGPKHFTDLIRFFYLPADLTDLEKSGCSHTFPRTVTKLIDSGVSFEKVVGRRLLEITFEKKPFLSYFLCLGCLPSFSCLNHFKARLRIPQLKVDHTTECVLRNLIALEQCQYQEQPYICNYVSLVDSLIHTQVDVDLLVEKEVIVHEMGSDKEVAVLVNGLCKHVVVNSTCYYDIINELNKHYQNIWNRTMAALWLVYFRDAWRASSTLVGIAFLVYTAFNFVRLARDLFY*