Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512390 | XP_013461183.1 | 90.066 | 453 | 39 | 3 | 84 | 536 | 19 | 465 | 0.0 | 831 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512390 | A0A072V080 | 90.066 | 453 | 39 | 3 | 84 | 536 | 19 | 465 | 0.0 | 831 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020930 | Msa0512390 | 0.807335 | 5.316409e-50 | -8.615850e-47 |
| Msa0040450 | Msa0512390 | 0.838149 | 3.413770e-57 | -8.615850e-47 |
| Msa0068680 | Msa0512390 | 0.803733 | 3.028555e-49 | -8.615850e-47 |
| Msa0110970 | Msa0512390 | 0.804366 | 2.235625e-49 | -8.615850e-47 |
| Msa0114060 | Msa0512390 | 0.802342 | 5.871211e-49 | -8.615850e-47 |
| Msa0159930 | Msa0512390 | 0.814688 | 1.356659e-51 | -8.615850e-47 |
| Msa0197660 | Msa0512390 | 0.806092 | 9.729007e-50 | -8.615850e-47 |
| Msa0222620 | Msa0512390 | 0.802298 | 5.995212e-49 | -8.615850e-47 |
| Msa0372220 | Msa0512390 | 0.937918 | 1.584078e-98 | -8.615850e-47 |
| Msa0419820 | Msa0512390 | 0.800458 | 1.427678e-48 | -8.615850e-47 |
| Msa0420840 | Msa0512390 | 0.840020 | 1.118236e-57 | -8.615850e-47 |
| Msa0432770 | Msa0512390 | 0.808362 | 3.214789e-50 | -8.615850e-47 |
| Msa0433640 | Msa0512390 | 0.802131 | 6.487750e-49 | -8.615850e-47 |
| Msa0479170 | Msa0512390 | 0.805386 | 1.368679e-49 | -8.615850e-47 |
| Msa0480000 | Msa0512390 | 0.822666 | 2.096949e-53 | -8.615850e-47 |
| Msa0480980 | Msa0512390 | 0.817335 | 3.478333e-52 | -8.615850e-47 |
| Msa0239800 | Msa0512390 | 0.812086 | 5.060365e-51 | -8.615850e-47 |
| Msa0277820 | Msa0512390 | 0.811869 | 5.641565e-51 | -8.615850e-47 |
| Msa0309770 | Msa0512390 | 0.803550 | 3.304656e-49 | -8.615850e-47 |
| Msa0317510 | Msa0512390 | 0.810045 | 1.401273e-50 | -8.615850e-47 |
| Msa0321860 | Msa0512390 | 0.800101 | 1.687688e-48 | -8.615850e-47 |
| Msa0512390 | Msa0581760 | 0.823799 | 1.140450e-53 | -8.615850e-47 |
| Msa0512390 | Msa0689010 | 0.829067 | 6.335018e-55 | -8.615850e-47 |
| Msa0512390 | Msa0744040 | 0.802662 | 5.043368e-49 | -8.615850e-47 |
| Msa0512390 | Msa0796530 | 0.813709 | 2.231183e-51 | -8.615850e-47 |
| Msa0512390 | Msa0824660 | 0.805502 | 1.294551e-49 | -8.615850e-47 |
| Msa0512390 | Msa1079590 | 0.802521 | 5.392253e-49 | -8.615850e-47 |
| Msa0512390 | Msa1082500 | 0.815137 | 1.078283e-51 | -8.615850e-47 |
| Msa0512390 | Msa1097800 | 0.822266 | 2.596575e-53 | -8.615850e-47 |
| Msa0512390 | Msa1168160 | 0.804739 | 1.869445e-49 | -8.615850e-47 |
| Msa0512390 | Msa1222970 | 0.816321 | 5.874593e-52 | -8.615850e-47 |
| Msa0512390 | Msa1238930 | 0.805843 | 1.097539e-49 | -8.615850e-47 |
| Msa0512390 | Msa1264020 | 0.836501 | 9.015932e-57 | -8.615850e-47 |
| Msa0512390 | Msa1283860 | 0.802175 | 6.355182e-49 | -8.615850e-47 |
| Msa0512390 | Msa1338200 | 0.801425 | 9.059783e-49 | -8.615850e-47 |
| Msa0512390 | Msa1356280 | 0.866278 | 3.203767e-65 | -8.615850e-47 |
| Msa0512390 | Msa1367080 | 0.820506 | 6.617753e-53 | -8.615850e-47 |
| Msa0512390 | Msa1415640 | 0.822513 | 2.275230e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512390 | MtrunA17_Chr3g0120561 | 88.069 | 461 | 40 | 4 | 84 | 536 | 19 | 472 | 0.0 | 822 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512390 | AT1G02960.2 | 33.623 | 345 | 193 | 11 | 210 | 533 | 142 | 471 | 7.56e-41 | 154 |
| Msa0512390 | AT1G02960.1 | 32.464 | 345 | 188 | 12 | 210 | 533 | 142 | 462 | 2.62e-37 | 144 |
| Msa0512390 | AT1G02960.5 | 31.387 | 274 | 155 | 9 | 210 | 464 | 142 | 401 | 8.85e-22 | 98.2 |
| Msa0512390 | AT1G02960.3 | 29.927 | 274 | 150 | 10 | 210 | 464 | 142 | 392 | 1.49e-18 | 88.6 |
| Msa0512390 | AT1G02960.6 | 29.249 | 253 | 146 | 9 | 210 | 443 | 142 | 380 | 1.70e-12 | 69.7 |
| Msa0512390 | AT1G02960.4 | 29.249 | 253 | 146 | 9 | 210 | 443 | 142 | 380 | 1.70e-12 | 69.7 |
Find 135 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTAAAATTCAGGTGAATT+TGG | 0.182393 | 3_4:-62145207 | Msa0512390:intron |
| GTCAATACATGCCAGCTTTC+TGG | 0.184598 | 3_4:+62149384 | None:intergenic |
| GATAGATTTCACAATGCTTT+AGG | 0.198003 | 3_4:-62145667 | Msa0512390:CDS |
| GCGCGATTAGATTTGTTAAA+AGG | 0.237162 | 3_4:-62148931 | Msa0512390:intron |
| CACTCAGAAGACAGCATTTC+CGG | 0.253174 | 3_4:-62149202 | Msa0512390:CDS |
| ATAGATTTCACAATGCTTTA+GGG | 0.281106 | 3_4:-62145666 | Msa0512390:CDS |
| TCAACAGCTTTCATAATTTC+AGG | 0.309850 | 3_4:+62146215 | None:intergenic |
| GGAGGTGATGAAGATGTAAT+TGG | 0.311573 | 3_4:+62149160 | None:intergenic |
| TAATGAAGGTGATTAGATTA+AGG | 0.321095 | 3_4:+62149139 | None:intergenic |
| GATCCGCTATCCACAGGTTC+AGG | 0.328904 | 3_4:+62145842 | None:intergenic |
| AGGCCTTCTGCAAGTTTAGA+TGG | 0.329905 | 3_4:-62146188 | Msa0512390:CDS |
| GCGTAATGGTCGTCGTCATC+TGG | 0.339375 | 3_4:+62149108 | None:intergenic |
| GGGAGAGGTGGTTGCTGATT+CGG | 0.356470 | 3_4:-62147870 | Msa0512390:CDS |
| AACGACAGCGATTAACAAAA+AGG | 0.369757 | 3_4:-62149781 | Msa0512390:CDS |
| TGAGTTTAATCTTCCCCTAA+TGG | 0.371118 | 3_4:-62146090 | Msa0512390:CDS |
| CTCGTACAAGCTAAAGGAAT+GGG | 0.371558 | 3_4:-62144231 | Msa0512390:CDS |
| AACTCTTGGACTAAAGATAA+TGG | 0.371714 | 3_4:+62144179 | None:intergenic |
| CACAAGTAAAGCCTGGTAAA+TGG | 0.377776 | 3_4:+62149418 | None:intergenic |
| TATACACTAACTTTACATCT+TGG | 0.380511 | 3_4:+62143592 | None:intergenic |
| TCATCAGTGACACATAACTA+TGG | 0.382019 | 3_4:-62146275 | Msa0512390:CDS |
| TCTGACCACATGAATCAAAC+TGG | 0.383101 | 3_4:+62143875 | None:intergenic |
| CAACAACCGTCTCTGGCAAA+TGG | 0.384581 | 3_4:+62145879 | None:intergenic |
| TGATAACTGTTGCAGGCATC+TGG | 0.391339 | 3_4:-62146328 | Msa0512390:intron |
| CTTCAATCTCTAATATTGAT+AGG | 0.393259 | 3_4:-62146241 | Msa0512390:CDS |
| TGCATTTCAATGGACCTTAG+AGG | 0.395662 | 3_4:-62143632 | Msa0512390:three_prime_UTR |
| AGTAATTCTCATGTGTTGAT+TGG | 0.396579 | 3_4:+62145720 | None:intergenic |
| AATTGCATTTACCTCCTCTA+AGG | 0.402894 | 3_4:+62143618 | None:intergenic |
| CCACCTCTCCCAATTCATTC+CGG | 0.417889 | 3_4:+62147882 | None:intergenic |
| GGGAGAGGTGGTTGCTGATT+CGG | 0.418461 | 3_4:-62148434 | Msa0512390:intron |
| GGGTGACAACCGGAATGAAT+TGG | 0.424438 | 3_4:-62147891 | Msa0512390:CDS |
| GCCAGCTTTCTGGCTGAGTT+CGG | 0.428469 | 3_4:+62149394 | None:intergenic |
| TCACTGTCAACAACCGTCTC+TGG | 0.431199 | 3_4:+62145872 | None:intergenic |
| TTATGAAAGCTGTTGATCAT+AGG | 0.434946 | 3_4:-62146208 | Msa0512390:CDS |
| AATGAATAAGTAGAAATTAC+CGG | 0.438451 | 3_4:+62149183 | None:intergenic |
| TCATCATTTCTGATAAATTG+AGG | 0.438657 | 3_4:+62147391 | None:intergenic |
| AGTGAATAGAATAGCAAATT+CGG | 0.442548 | 3_4:-62143780 | Msa0512390:three_prime_UTR |
| TCAACATTGTCGCAAACTCT+TGG | 0.448555 | 3_4:+62144165 | None:intergenic |
| GGTGACAACCGGAATGAATT+GGG | 0.448874 | 3_4:-62147890 | Msa0512390:CDS |
| GGGCGTGGGTTGCATTTCAA+TGG | 0.449531 | 3_4:-62143642 | Msa0512390:three_prime_UTR |
| AGAACAACAACTACCTCTTC+CGG | 0.454301 | 3_4:-62148953 | Msa0512390:CDS |
| TCAGTAACATAGAGGCTTCA+AGG | 0.455476 | 3_4:+62143560 | None:intergenic |
| CATCATTTCTGATAAATTGA+GGG | 0.460688 | 3_4:+62147392 | None:intergenic |
| CCACGTGATAATCAAAGAAA+AGG | 0.463174 | 3_4:-62145938 | Msa0512390:CDS |
| CTTACCACGGAGGGTGAATA+CGG | 0.464811 | 3_4:+62144121 | None:intergenic |
| CAAGCTAAAGGAATGGGGTT+TGG | 0.465002 | 3_4:-62144225 | Msa0512390:CDS |
| TAAGCGTGAACGAACCTTGT+TGG | 0.467219 | 3_4:+62149056 | None:intergenic |
| GGATTAAGCTCCCCACTTCA+AGG | 0.468431 | 3_4:+62144142 | None:intergenic |
| GGGTTTGGTGGCAGCAAAGA+TGG | 0.469797 | 3_4:-62144210 | Msa0512390:CDS |
| TTAATCGCTGTCGTTGTCGT+TGG | 0.472526 | 3_4:+62149789 | None:intergenic |
| AACAACCGTCTCTGGCAAAT+GGG | 0.479682 | 3_4:+62145880 | None:intergenic |
| AAATCTAATCGCGCCGGAAG+AGG | 0.480654 | 3_4:+62148940 | None:intergenic |
| ACACATGAGAATTACTTTCC+CGG | 0.482287 | 3_4:-62145713 | Msa0512390:CDS |
| AAACGGCAGCTCCATTTACC+AGG | 0.493348 | 3_4:-62149429 | Msa0512390:intron |
| CACATGAGAATTACTTTCCC+GGG | 0.495518 | 3_4:-62145712 | Msa0512390:CDS |
| GCCGAACTCAGCCAGAAAGC+TGG | 0.495802 | 3_4:-62149395 | Msa0512390:CDS |
| ATCTGGAAATTGATTAATGA+AGG | 0.499518 | 3_4:+62149125 | None:intergenic |
| AGCTTCAGTTTCAGAAGGCT+CGG | 0.501715 | 3_4:+62146121 | None:intergenic |
| TGGATTATAGATTATTAGAT+CGG | 0.505688 | 3_4:-62149842 | Msa0512390:five_prime_UTR |
| TTCTCAAAAGCAAATTCATC+CGG | 0.509214 | 3_4:-62147298 | Msa0512390:intron |
| ACACCTTTGAATTGATGTAA+AGG | 0.511685 | 3_4:-62143727 | Msa0512390:three_prime_UTR |
| ACTTCAATGAGGGTGACAAC+CGG | 0.512111 | 3_4:-62147901 | Msa0512390:CDS |
| TTTCCTTTACATCAATTCAA+AGG | 0.512245 | 3_4:+62143724 | None:intergenic |
| CCTCCTGGATAAGACTGATC+TGG | 0.514851 | 3_4:-62146051 | Msa0512390:intron |
| GCTAAAGGAATGGGGTTTGG+TGG | 0.518261 | 3_4:-62144222 | Msa0512390:CDS |
| AGATCGGAAACGAGAAATGA+AGG | 0.519884 | 3_4:-62149826 | Msa0512390:exon |
| CTGTCGTTGTCGTTGGAAGC+CGG | 0.521620 | 3_4:+62149796 | None:intergenic |
| CCACCAGATCAGTCTTATCC+AGG | 0.521993 | 3_4:+62146048 | None:intergenic |
| AAACAATCAGCTTTCCATCC+AGG | 0.522382 | 3_4:+62145154 | None:intergenic |
| AGATGAGGAGGTTGAAATGC+CGG | 0.528294 | 3_4:-62147924 | Msa0512390:CDS |
| CATTTACCAGGCTTTACTTG+TGG | 0.528693 | 3_4:-62149417 | Msa0512390:CDS |
| TCTCGTACAAGCTAAAGGAA+TGG | 0.530008 | 3_4:-62144232 | Msa0512390:CDS |
| CTATCAATATTAGAGATTGA+AGG | 0.532326 | 3_4:+62146242 | None:intergenic |
| ACGAAAGAAGATTAGCGTAA+TGG | 0.532658 | 3_4:+62149094 | None:intergenic |
| TTGTCACCCTCATTGAAGTC+CGG | 0.534546 | 3_4:+62147905 | None:intergenic |
| CTGACCACATGAATCAAACT+GGG | 0.538852 | 3_4:+62143876 | None:intergenic |
| ATCCGCTATCCACAGGTTCA+GGG | 0.539339 | 3_4:+62145843 | None:intergenic |
| TCTGTTATCGCTGAAAGTGT+TGG | 0.540296 | 3_4:-62145637 | Msa0512390:CDS |
| GAGAAATGAAGGATGATGAC+CGG | 0.542101 | 3_4:-62149815 | Msa0512390:exon |
| AAGCATCATTTCAAGATACC+TGG | 0.547835 | 3_4:-62145172 | Msa0512390:CDS |
| TTTCATCCTCAGTAACATAG+AGG | 0.548157 | 3_4:+62143552 | None:intergenic |
| CTTGATGATCCGCTATCCAC+AGG | 0.549070 | 3_4:+62145836 | None:intergenic |
| AGCTGGCATGTATTGACCGC+CGG | 0.557449 | 3_4:-62149378 | Msa0512390:intron |
| GGTCGTAATCATGCTGCTGA+TGG | 0.558737 | 3_4:-62143512 | Msa0512390:three_prime_UTR |
| GAACAGGAAGGAAGTTCAAG+TGG | 0.574315 | 3_4:-62143945 | Msa0512390:intron |
| CATCAGTGACACATAACTAT+GGG | 0.578285 | 3_4:-62146274 | Msa0512390:CDS |
| GTTCGGCCACAAGTAAAGCC+TGG | 0.584711 | 3_4:+62149411 | None:intergenic |
| AACGAACCTTGTTGGTAGCG+TGG | 0.586095 | 3_4:+62149064 | None:intergenic |
| TTTCAGAGAAATAAGAACAC+AGG | 0.586673 | 3_4:+62143906 | None:intergenic |
| CGACAATGTTGACCTTGAAG+TGG | 0.588515 | 3_4:-62144154 | Msa0512390:CDS |
| TGAAGGTGATTAGATTAAGG+AGG | 0.589732 | 3_4:+62149142 | None:intergenic |
| CAAGCTGGAGCTAGACCAGA+TGG | 0.589856 | 3_4:-62145422 | Msa0512390:intron |
| CCGGAATGAATTGGGAGAGG+TGG | 0.590158 | 3_4:-62147882 | Msa0512390:CDS |
| TCTCGAAGATGATGACATAG+TGG | 0.595575 | 3_4:-62146159 | Msa0512390:CDS |
| TTTGGACGAGTCTGGTCGAG+AGG | 0.596618 | 3_4:+62147422 | None:intergenic |
| TATATCCCATTTGCCAGAGA+CGG | 0.597841 | 3_4:-62145885 | Msa0512390:CDS |
| TCAGAAGTTGCTCGAAGATG+AGG | 0.601211 | 3_4:-62147939 | Msa0512390:intron |
| GAAATGCTGTCTTCTGAGTG+TGG | 0.604310 | 3_4:+62149205 | None:intergenic |
| TGACGACTCCCCTGAACCTG+TGG | 0.607193 | 3_4:-62145852 | Msa0512390:CDS |
| GGGAAAGAAAATGCAGACAA+TGG | 0.609349 | 3_4:-62145692 | Msa0512390:CDS |
| GGACGAGCTTCAGTTTCAGA+AGG | 0.609678 | 3_4:+62146116 | None:intergenic |
| ATCATGATGATGTGTGTAGA+GGG | 0.610988 | 3_4:+62143467 | None:intergenic |
| CGGATCATCAAGTGACAATG+AGG | 0.613056 | 3_4:-62145825 | Msa0512390:intron |
| GACAATGTTGACCTTGAAGT+GGG | 0.615907 | 3_4:-62144153 | Msa0512390:CDS |
| AGGCATCTGGAACAAAGCTA+AGG | 0.618629 | 3_4:-62146315 | Msa0512390:CDS |
| CAACCGGAATGAATTGGGAG+AGG | 0.619194 | 3_4:-62147885 | Msa0512390:CDS |
| ATTCTATTCACTACAAACAG+AGG | 0.619409 | 3_4:+62143791 | None:intergenic |
| ACAAAACCACGCTACCAACA+AGG | 0.621213 | 3_4:-62149070 | Msa0512390:intron |
| TCCCCTGAACCTGTGGATAG+CGG | 0.621484 | 3_4:-62145845 | Msa0512390:CDS |
| ACACATAACTATGGGCACAC+TGG | 0.625934 | 3_4:-62146266 | Msa0512390:CDS |
| TGAAATGCCGGACTTCAATG+AGG | 0.626528 | 3_4:-62147912 | Msa0512390:CDS |
| TTTCCATCTAAACTTGCAGA+AGG | 0.628441 | 3_4:+62146185 | None:intergenic |
| TTTAACAAATCTAATCGCGC+CGG | 0.629342 | 3_4:+62148934 | None:intergenic |
| TCGTACAAGCTAAAGGAATG+GGG | 0.631068 | 3_4:-62144230 | Msa0512390:CDS |
| AGGGGAAGATTAAACTCATG+TGG | 0.635532 | 3_4:+62146095 | None:intergenic |
| TCCGCTATCCACAGGTTCAG+GGG | 0.635538 | 3_4:+62145844 | None:intergenic |
| ATTTCAATGGACCTTAGAGG+AGG | 0.635630 | 3_4:-62143629 | Msa0512390:three_prime_UTR |
| TTGGAGCACATAACTCATTG+AGG | 0.636699 | 3_4:-62145618 | Msa0512390:intron |
| AGATAATGTTTCTGAAGATG+AGG | 0.638275 | 3_4:-62147840 | Msa0512390:intron |
| TTGAAGCCTCTATGTTACTG+AGG | 0.640878 | 3_4:-62143558 | Msa0512390:three_prime_UTR |
| CTCATTTAGCAAGTATACCG+AGG | 0.644633 | 3_4:-62145124 | Msa0512390:intron |
| CATAGCAATCTTACCACGGA+GGG | 0.644759 | 3_4:+62144112 | None:intergenic |
| AACAGGAAGGAAGTTCAAGT+GGG | 0.650687 | 3_4:-62143944 | Msa0512390:intron |
| GAAGTTGCTCGAAGATGAGG+AGG | 0.651692 | 3_4:-62147936 | Msa0512390:CDS |
| ATCATTTCAAGATACCTGGA+TGG | 0.654090 | 3_4:-62145168 | Msa0512390:CDS |
| GAAATGCCGGACTTCAATGA+GGG | 0.659726 | 3_4:-62147911 | Msa0512390:CDS |
| GACCACATGAATCAAACTGG+GGG | 0.672181 | 3_4:+62143878 | None:intergenic |
| GAAGAATTGAAACACGCACG+TGG | 0.673376 | 3_4:-62149862 | None:intergenic |
| TATCATGATGATGTGTGTAG+AGG | 0.683605 | 3_4:+62143466 | None:intergenic |
| TGACCACATGAATCAAACTG+GGG | 0.686062 | 3_4:+62143877 | None:intergenic |
| AACACTTTCAGCGATAACAG+AGG | 0.693650 | 3_4:+62145639 | None:intergenic |
| CCAGATCAGTCTTATCCAGG+AGG | 0.693888 | 3_4:+62146051 | None:intergenic |
| AGATACTGTTTCTGACAATG+AGG | 0.697104 | 3_4:-62148404 | Msa0512390:intron |
| TAATCCGTATTCACCCTCCG+TGG | 0.736498 | 3_4:-62144125 | Msa0512390:intron |
| ACATAGCAATCTTACCACGG+AGG | 0.757199 | 3_4:+62144111 | None:intergenic |
| ACAATGTTGACCTTGAAGTG+GGG | 0.758346 | 3_4:-62144152 | Msa0512390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAGTAATTAATTAATATTT+AGG | + | chr3_4:62144414-62144433 | None:intergenic | 10.0% |
| !!! | TTTTTTGAAAGAAATAATTT+CGG | - | chr3_4:62145622-62145641 | Msa0512390:CDS | 10.0% |
| !!! | TATTTTTTATATTTTCATCT+CGG | - | chr3_4:62146406-62146425 | Msa0512390:intron | 10.0% |
| !!! | GATTTACTTTTTTTTTTTTT+TGG | - | chr3_4:62146887-62146906 | Msa0512390:intron | 10.0% |
| !!! | GAAATTTTAATTTATTCATT+TGG | - | chr3_4:62149784-62149803 | Msa0512390:CDS | 10.0% |
| !!! | TTTTTTTTTCATTTTTTCGT+CGG | - | chr3_4:62143676-62143695 | Msa0512390:three_prime_UTR | 15.0% |
| !!! | ATGATTTTATCTTTTATGTT+TGG | - | chr3_4:62145024-62145043 | Msa0512390:intron | 15.0% |
| !! | TCATATTAGTTCATAAATAA+TGG | + | chr3_4:62145242-62145261 | None:intergenic | 15.0% |
| !!! | TATCTTTTCTTTATTCTTAA+AGG | - | chr3_4:62145305-62145324 | Msa0512390:intron | 15.0% |
| !!! | ATCTTTTCTTTATTCTTAAA+GGG | - | chr3_4:62145306-62145325 | Msa0512390:intron | 15.0% |
| !! | TTGTAATTGTAATTAAATGA+GGG | + | chr3_4:62145340-62145359 | None:intergenic | 15.0% |
| !! | ATTGTAATTGTAATTAAATG+AGG | + | chr3_4:62145341-62145360 | None:intergenic | 15.0% |
| !!! | TATCGTTTCTTTATTTTTAA+AGG | - | chr3_4:62145862-62145881 | Msa0512390:CDS | 15.0% |
| !!! | ATCGTTTCTTTATTTTTAAA+GGG | - | chr3_4:62145863-62145882 | Msa0512390:CDS | 15.0% |
| !!! | AATTAATCATAGTTCTAAAA+GGG | + | chr3_4:62146280-62146299 | None:intergenic | 15.0% |
| !!! | TAATTAATCATAGTTCTAAA+AGG | + | chr3_4:62146281-62146300 | None:intergenic | 15.0% |
| !! | TAATTATATCAATGTTTGAA+TGG | - | chr3_4:62146942-62146961 | Msa0512390:intron | 15.0% |
| !!! | TGTTTTTTCTTTTCATTTTT+TGG | - | chr3_4:62148012-62148031 | Msa0512390:intron | 15.0% |
| !!! | GTTTTTTCTTTTCATTTTTT+GGG | - | chr3_4:62148013-62148032 | Msa0512390:intron | 15.0% |
| !!! | TTTTTTCTTTTCATTTTTTG+GGG | - | chr3_4:62148014-62148033 | Msa0512390:intron | 15.0% |
| !!! | TTTTTAATAGTTTGTATGTT+GGG | - | chr3_4:62148621-62148640 | Msa0512390:intron | 15.0% |
| !!! | AATGATAATTTTACTTGAAA+TGG | - | chr3_4:62148977-62148996 | Msa0512390:intron | 15.0% |
| !! | CATAATCAAACATTAAATAA+GGG | + | chr3_4:62149028-62149047 | None:intergenic | 15.0% |
| !! | TCATAATCAAACATTAAATA+AGG | + | chr3_4:62149029-62149048 | None:intergenic | 15.0% |
| !! | TGGATTATAGATTATTAGAT+CGG | - | chr3_4:62143475-62143494 | Msa0512390:three_prime_UTR | 20.0% |
| !! | TGAAAAAAAAACAAAAACCT+CGG | + | chr3_4:62143667-62143686 | None:intergenic | 20.0% |
| !!! | TTTTCTAGATTTAAATTGAG+TGG | - | chr3_4:62143826-62143845 | Msa0512390:three_prime_UTR | 20.0% |
| !! | TAAGAGTAAAATGTTTGATT+AGG | + | chr3_4:62144078-62144097 | None:intergenic | 20.0% |
| !! | AATGAATAAGTAGAAATTAC+CGG | + | chr3_4:62144137-62144156 | None:intergenic | 20.0% |
| !! | TTATTAATTCATTCTTACTC+AGG | - | chr3_4:62144553-62144572 | Msa0512390:intron | 20.0% |
| !!! | TACAATTATTATTGTTGTTG+TGG | - | chr3_4:62144791-62144810 | Msa0512390:intron | 20.0% |
| !! | AAAAAACATAAACAAACACA+TGG | + | chr3_4:62144981-62145000 | None:intergenic | 20.0% |
| !!! | TTATGTTTTTTCCTTTTGTT+TGG | - | chr3_4:62144990-62145009 | Msa0512390:intron | 20.0% |
| !!! | TATGTTTTTTCCTTTTGTTT+GGG | - | chr3_4:62144991-62145010 | Msa0512390:intron | 20.0% |
| !! | TTATGTTAACATATGAGTAA+TGG | - | chr3_4:62145087-62145106 | Msa0512390:intron | 20.0% |
| !!! | TACAATTATTATTGTTGTTG+TGG | - | chr3_4:62144791-62144810 | Msa0512390:intron | 20.0% |
| !! | TTAATAACAACCAAACAAAA+GGG | + | chr3_4:62145561-62145580 | None:intergenic | 20.0% |
| !!! | GTGATTTTATCTTTTATGTT+TGG | - | chr3_4:62145581-62145600 | Msa0512390:intron | 20.0% |
| !! | TCATATTAGTTCATAAACAA+TGG | + | chr3_4:62145799-62145818 | None:intergenic | 20.0% |
| !!! | AAATATTTTCAGTTTCAACA+GGG | + | chr3_4:62146101-62146120 | None:intergenic | 20.0% |
| !!! | AAACTGAAAATATTTGTTAG+TGG | - | chr3_4:62146106-62146125 | Msa0512390:CDS | 20.0% |
| !!! | AACTGAAAATATTTGTTAGT+GGG | - | chr3_4:62146107-62146126 | Msa0512390:CDS | 20.0% |
| !! | TAATCTGTTAGTTATATCTT+GGG | + | chr3_4:62146462-62146481 | None:intergenic | 20.0% |
| !! | TTAATCTGTTAGTTATATCT+TGG | + | chr3_4:62146463-62146482 | None:intergenic | 20.0% |
| !! | TGTTTCTTCAAAAAAGTAAA+TGG | - | chr3_4:62146656-62146675 | Msa0512390:intron | 20.0% |
| !! | AAAAAAGTAAATGGATGTTA+TGG | - | chr3_4:62146665-62146684 | Msa0512390:intron | 20.0% |
| !!! | ATATGTGACATTTTTAATGA+TGG | - | chr3_4:62146695-62146714 | Msa0512390:intron | 20.0% |
| !! | TTGACAATATTTGCAAAAAT+GGG | + | chr3_4:62146730-62146749 | None:intergenic | 20.0% |
| !! | ATTGACAATATTTGCAAAAA+TGG | + | chr3_4:62146731-62146750 | None:intergenic | 20.0% |
| !! | TGTAAAGAAAATATGTTAGA+GGG | + | chr3_4:62146849-62146868 | None:intergenic | 20.0% |
| !! | TTGTAAAGAAAATATGTTAG+AGG | + | chr3_4:62146850-62146869 | None:intergenic | 20.0% |
| !!! | CATATTTTCTTTACAAAAGA+TGG | - | chr3_4:62146854-62146873 | Msa0512390:intron | 20.0% |
| !! | TTACAAAGAAACTAAAATTC+AGG | - | chr3_4:62148101-62148120 | Msa0512390:intron | 20.0% |
| !!! | TGGAGTTTTTTATATTATCA+AGG | + | chr3_4:62148398-62148417 | None:intergenic | 20.0% |
| !!! | AGAAACTTTTTATTAGAAAG+TGG | + | chr3_4:62148418-62148437 | None:intergenic | 20.0% |
| !!! | CTTTTTAATAGTTTGTATGT+TGG | - | chr3_4:62148620-62148639 | Msa0512390:intron | 20.0% |
| !! | TATAATAGAAAACTTAGTCT+TGG | + | chr3_4:62148660-62148679 | None:intergenic | 20.0% |
| !! | AATGTTTGATTATGATTTGA+TGG | - | chr3_4:62149034-62149053 | Msa0512390:intron | 20.0% |
| ! | GATTAACAAAAAGGAAAACA+TGG | - | chr3_4:62143545-62143564 | Msa0512390:three_prime_UTR | 25.0% |
| ! | TAATAAAATTTGTATGCCTG+CGG | - | chr3_4:62143854-62143873 | Msa0512390:three_prime_UTR | 25.0% |
| ! | ATTAGGATTGAATTGAAGAA+AGG | + | chr3_4:62144061-62144080 | None:intergenic | 25.0% |
| !! | ACATTTTACTCTTACATTAC+AGG | - | chr3_4:62144084-62144103 | Msa0512390:intron | 25.0% |
| ! | TAATGAAGGTGATTAGATTA+AGG | + | chr3_4:62144181-62144200 | None:intergenic | 25.0% |
| ! | ATCTGGAAATTGATTAATGA+AGG | + | chr3_4:62144195-62144214 | None:intergenic | 25.0% |
| ! | AAACTTTAATACCTGAAATG+AGG | + | chr3_4:62144527-62144546 | None:intergenic | 25.0% |
| ! | GTTATTCTTATAAGCTATCT+TGG | - | chr3_4:62144632-62144651 | Msa0512390:intron | 25.0% |
| ! | TTAATAACAACCCAAACAAA+AGG | + | chr3_4:62145004-62145023 | None:intergenic | 25.0% |
| !! | GTCTTTGAAAGATATAAGTT+CGG | - | chr3_4:62145064-62145083 | Msa0512390:intron | 25.0% |
| ! | ACTAAACCAATCTACATTTA+AGG | + | chr3_4:62145131-62145150 | None:intergenic | 25.0% |
| ! | CTTAATAACAACCAAACAAA+AGG | + | chr3_4:62145562-62145581 | None:intergenic | 25.0% |
| ! | TAATGTTAGCAAATGAGTAA+TGG | - | chr3_4:62145645-62145664 | Msa0512390:CDS | 25.0% |
| ! | AACTAAACCAATCTACATTT+AGG | + | chr3_4:62145132-62145151 | None:intergenic | 25.0% |
| ! | CATCATTTCTGATAAATTGA+GGG | + | chr3_4:62145928-62145947 | None:intergenic | 25.0% |
| ! | TCATCATTTCTGATAAATTG+AGG | + | chr3_4:62145929-62145948 | None:intergenic | 25.0% |
| !! | CAAATATTTTCAGTTTCAAC+AGG | + | chr3_4:62146102-62146121 | None:intergenic | 25.0% |
| !! | ACTGAAAATATTTGTTAGTG+GGG | - | chr3_4:62146108-62146127 | Msa0512390:CDS | 25.0% |
| ! | CTATCAATATTAGAGATTGA+AGG | + | chr3_4:62147078-62147097 | None:intergenic | 25.0% |
| ! | CTTCAATCTCTAATATTGAT+AGG | - | chr3_4:62147076-62147095 | Msa0512390:intron | 25.0% |
| ! | ATATACATGGAAAAGTAAAC+AGG | + | chr3_4:62147332-62147351 | None:intergenic | 25.0% |
| !! | TATTAGTCTATTGTCATATC+TGG | - | chr3_4:62147546-62147565 | Msa0512390:intron | 25.0% |
| ! | TTAAATCTGTTTACTTGTAC+AGG | - | chr3_4:62147571-62147590 | Msa0512390:intron | 25.0% |
| ! | ATAGATTTCACAATGCTTTA+GGG | - | chr3_4:62147651-62147670 | Msa0512390:intron | 25.0% |
| ! | TTCAATTGCATAAAAATACC+AGG | + | chr3_4:62147741-62147760 | None:intergenic | 25.0% |
| ! | AATATTTGAAAAACTACAGC+AGG | - | chr3_4:62147825-62147844 | Msa0512390:intron | 25.0% |
| !!! | ACATTTGTTTCTAATACACA+TGG | - | chr3_4:62148063-62148082 | Msa0512390:intron | 25.0% |
| ! | AACTAAAATTCAGGTGAATT+TGG | - | chr3_4:62148110-62148129 | Msa0512390:intron | 25.0% |
| !!! | GTGAAGTTTTATAAATCCAT+AGG | - | chr3_4:62148215-62148234 | Msa0512390:intron | 25.0% |
| ! | GTATAAAGCATAAACTTTCA+GGG | + | chr3_4:62148263-62148282 | None:intergenic | 25.0% |
| ! | AGTATAAAGCATAAACTTTC+AGG | + | chr3_4:62148264-62148283 | None:intergenic | 25.0% |
| !!! | TTTATACTTAAGAAAGTGCT+TGG | - | chr3_4:62148276-62148295 | Msa0512390:intron | 25.0% |
| !!! | TTATACTTAAGAAAGTGCTT+GGG | - | chr3_4:62148277-62148296 | Msa0512390:intron | 25.0% |
| !! | TAAGGGTATATCTTAAATGT+AGG | + | chr3_4:62149011-62149030 | None:intergenic | 25.0% |
| ! | TTTGATTATGATTTGATGGA+AGG | - | chr3_4:62149038-62149057 | Msa0512390:intron | 25.0% |
| !! | TTCTTGATCTATTTCAGTTT+TGG | - | chr3_4:62149344-62149363 | Msa0512390:intron | 25.0% |
| ! | AGTGAATAGAATAGCAAATT+CGG | - | chr3_4:62149537-62149556 | Msa0512390:intron | 25.0% |
| ! | TTTCCTTTACATCAATTCAA+AGG | + | chr3_4:62149596-62149615 | None:intergenic | 25.0% |
| ! | TGCAATTTCGATAGTAAAAA+AGG | - | chr3_4:62149653-62149672 | Msa0512390:intron | 25.0% |
| ! | GCAATTTCGATAGTAAAAAA+GGG | - | chr3_4:62149654-62149673 | Msa0512390:intron | 25.0% |
| ! | CAATTTCGATAGTAAAAAAG+GGG | - | chr3_4:62149655-62149674 | Msa0512390:intron | 25.0% |
| ! | TATACACTAACTTTACATCT+TGG | + | chr3_4:62149728-62149747 | None:intergenic | 25.0% |
| AAAAAGGAAAACATGGATTC+AGG | - | chr3_4:62143552-62143571 | Msa0512390:three_prime_UTR | 30.0% | |
| GTTAACTATCGAAGTTTCTT+CGG | + | chr3_4:62143712-62143731 | None:intergenic | 30.0% | |
| TAGATTTAAATTGAGTGGCA+AGG | - | chr3_4:62143831-62143850 | Msa0512390:three_prime_UTR | 30.0% | |
| GGAGATAGAAGTAAGAAAAT+TGG | + | chr3_4:62144040-62144059 | None:intergenic | 30.0% | |
| AATCTACATTTAAGGACATC+AGG | + | chr3_4:62145123-62145142 | None:intergenic | 30.0% | |
| TGATGTCCTTAAATGTAGAT+TGG | - | chr3_4:62145122-62145141 | Msa0512390:intron | 30.0% | |
| AAATTAGTCCTTGTGATTTG+AGG | - | chr3_4:62145152-62145171 | Msa0512390:CDS | 30.0% | |
| ATGACCAACATTGTATCTTT+CGG | - | chr3_4:62145258-62145277 | Msa0512390:intron | 30.0% | |
| ! | AGATAATGTTTCTGAAGATG+AGG | - | chr3_4:62145477-62145496 | Msa0512390:CDS | 30.0% |
| TTGTTACCATGTGTTTGTTT+AGG | - | chr3_4:62144972-62144991 | Msa0512390:intron | 30.0% | |
| GAAATACCTAAACAAACACA+TGG | + | chr3_4:62145539-62145558 | None:intergenic | 30.0% | |
| ! | TTAGGTATTTCCCTTTTGTT+TGG | - | chr3_4:62145548-62145567 | Msa0512390:intron | 30.0% |
| ! | TAAATTGAGGGCCATATTTT+TGG | + | chr3_4:62145916-62145935 | None:intergenic | 30.0% |
| TTCTCAAAAGCAAATTCATC+CGG | - | chr3_4:62146019-62146038 | Msa0512390:intron | 30.0% | |
| ! | CAAGAAAAATGCTAGTTTCT+GGG | - | chr3_4:62146051-62146070 | Msa0512390:intron | 30.0% |
| ! | TTTATGCTCTGAATTGAGTA+AGG | - | chr3_4:62146249-62146268 | Msa0512390:CDS | 30.0% |
| TAAGTGATGTTAAGTTCTGT+AGG | - | chr3_4:62146341-62146360 | Msa0512390:intron | 30.0% | |
| !! | ATGACTTTTATTTCCCCTAT+TGG | - | chr3_4:62146431-62146450 | Msa0512390:intron | 30.0% |
| TATCTTGGGTTTAACCAATA+GGG | + | chr3_4:62146448-62146467 | None:intergenic | 30.0% | |
| ATATCTTGGGTTTAACCAAT+AGG | + | chr3_4:62146449-62146468 | None:intergenic | 30.0% | |
| !! | TATTTTAGATATACCCTGTG+TGG | - | chr3_4:62146532-62146551 | Msa0512390:intron | 30.0% |
| TTGAATTTCAAATCCACACA+GGG | + | chr3_4:62146548-62146567 | None:intergenic | 30.0% | |
| TTTGAATTTCAAATCCACAC+AGG | + | chr3_4:62146549-62146568 | None:intergenic | 30.0% | |
| ACTTCTCTTCATGTATCAAA+AGG | + | chr3_4:62146760-62146779 | None:intergenic | 30.0% | |
| TCAACAGCTTTCATAATTTC+AGG | + | chr3_4:62147105-62147124 | None:intergenic | 30.0% | |
| TTATGAAAGCTGTTGATCAT+AGG | - | chr3_4:62147109-62147128 | Msa0512390:intron | 30.0% | |
| AAACAGGTGTCAAAGAATAA+CGG | + | chr3_4:62147316-62147335 | None:intergenic | 30.0% | |
| ! | AATGAGGTATTACTGTTCTA+TGG | - | chr3_4:62147508-62147527 | Msa0512390:intron | 30.0% |
| ! | AGTAATTCTCATGTGTTGAT+TGG | + | chr3_4:62147600-62147619 | None:intergenic | 30.0% |
| GATAGATTTCACAATGCTTT+AGG | - | chr3_4:62147650-62147669 | Msa0512390:intron | 30.0% | |
| TTTATGAAATTGTGCAGAAC+TGG | - | chr3_4:62147802-62147821 | Msa0512390:intron | 30.0% | |
| ! | AAAGCAAAAGTTTTACCATC+TGG | + | chr3_4:62147913-62147932 | None:intergenic | 30.0% |
| TTTCTGTGCAATAGAGTAAA+TGG | + | chr3_4:62147975-62147994 | None:intergenic | 30.0% | |
| !!! | TTCTTTTCATTTTTTGGGGT+TGG | - | chr3_4:62148018-62148037 | Msa0512390:intron | 30.0% |
| !!! | TCTTTTCATTTTTTGGGGTT+GGG | - | chr3_4:62148019-62148038 | Msa0512390:intron | 30.0% |
| GGATTTATAAAACTTCACCT+CGG | + | chr3_4:62148213-62148232 | None:intergenic | 30.0% | |
| TCTCCTTAACTATATCTTGA+AGG | - | chr3_4:62148446-62148465 | Msa0512390:intron | 30.0% | |
| ! | CTATTCCATTTGATTTAGAG+AGG | - | chr3_4:62148842-62148861 | Msa0512390:intron | 30.0% |
| ! | AATTTTCTCGTACAAGCTAA+AGG | - | chr3_4:62149080-62149099 | Msa0512390:CDS | 30.0% |
| AACTCTTGGACTAAAGATAA+TGG | + | chr3_4:62149141-62149160 | None:intergenic | 30.0% | |
| AGTTTAATTGCTCTATAGCT+TGG | - | chr3_4:62149258-62149277 | Msa0512390:intron | 30.0% | |
| GTTTAATTGCTCTATAGCTT+GGG | - | chr3_4:62149259-62149278 | Msa0512390:intron | 30.0% | |
| TTAATATCTACTCTTTGTCG+TGG | - | chr3_4:62149286-62149305 | Msa0512390:intron | 30.0% | |
| TAATATCTACTCTTTGTCGT+GGG | - | chr3_4:62149287-62149306 | Msa0512390:intron | 30.0% | |
| !!! | TTCAGTTTTGGTTATTGAAC+AGG | - | chr3_4:62149356-62149375 | Msa0512390:intron | 30.0% |
| TTTCAGAGAAATAAGAACAC+AGG | + | chr3_4:62149414-62149433 | None:intergenic | 30.0% | |
| ATTCTATTCACTACAAACAG+AGG | + | chr3_4:62149529-62149548 | None:intergenic | 30.0% | |
| ACACCTTTGAATTGATGTAA+AGG | - | chr3_4:62149590-62149609 | Msa0512390:intron | 30.0% | |
| AACGACAGCGATTAACAAAA+AGG | - | chr3_4:62143536-62143555 | Msa0512390:three_prime_UTR | 35.0% | |
| ! | AACATGGATTCAGGTTTGTT+CGG | - | chr3_4:62143561-62143580 | Msa0512390:three_prime_UTR | 35.0% |
| AATGCAAAAACTGCAATCCT+CGG | - | chr3_4:62143631-62143650 | Msa0512390:three_prime_UTR | 35.0% | |
| ! | TAACTACCGAAATTTTGAGC+CGG | + | chr3_4:62143740-62143759 | None:intergenic | 35.0% |
| TGCTGTTGACACATTACAAA+AGG | + | chr3_4:62143805-62143824 | None:intergenic | 35.0% | |
| TTTCAGTAGATTTACGTACG+CGG | + | chr3_4:62144017-62144036 | None:intergenic | 35.0% | |
| TGAAGGTGATTAGATTAAGG+AGG | + | chr3_4:62144178-62144197 | None:intergenic | 35.0% | |
| ACGAAAGAAGATTAGCGTAA+TGG | + | chr3_4:62144226-62144245 | None:intergenic | 35.0% | |
| TTTAACAAATCTAATCGCGC+CGG | + | chr3_4:62144386-62144405 | None:intergenic | 35.0% | |
| !! | GCGCGATTAGATTTGTTAAA+AGG | - | chr3_4:62144386-62144405 | Msa0512390:intron | 35.0% |
| !! | AGATACTGTTTCTGACAATG+AGG | - | chr3_4:62144913-62144932 | Msa0512390:intron | 35.0% |
| AAGTTAGTCCTCAAATCACA+AGG | + | chr3_4:62145163-62145182 | None:intergenic | 35.0% | |
| TGTCAGATGGAATACGTTTA+AGG | - | chr3_4:62145182-62145201 | Msa0512390:CDS | 35.0% | |
| ! | TAAGGACAATGCATGTTTTG+TGG | - | chr3_4:62145200-62145219 | Msa0512390:intron | 35.0% |
| ! | CAATCTACATTTAGGACATC+AGG | + | chr3_4:62145681-62145700 | None:intergenic | 35.0% |
| CTGATGTCCTAAATGTAGAT+TGG | - | chr3_4:62145679-62145698 | Msa0512390:CDS | 35.0% | |
| AAATTAGTCCTTGTGATTCG+AGG | - | chr3_4:62145709-62145728 | Msa0512390:CDS | 35.0% | |
| TGTCTGATGGAATACGTTTA+AGG | - | chr3_4:62145739-62145758 | Msa0512390:intron | 35.0% | |
| TAAGGACAATGCATGTATAG+TGG | - | chr3_4:62145757-62145776 | Msa0512390:intron | 35.0% | |
| !! | GGATGAATTTGCTTTTGAGA+AGG | + | chr3_4:62146020-62146039 | None:intergenic | 35.0% |
| ! | CCAGAAACTAGCATTTTTCT+TGG | + | chr3_4:62146053-62146072 | None:intergenic | 35.0% |
| ! | CCAAGAAAAATGCTAGTTTC+TGG | - | chr3_4:62146050-62146069 | Msa0512390:intron | 35.0% |
| AGTATTTAGATGAGACAGAC+AGG | + | chr3_4:62146175-62146194 | None:intergenic | 35.0% | |
| TGTCTGTCTCATCTAAATAC+TGG | - | chr3_4:62146174-62146193 | Msa0512390:CDS | 35.0% | |
| ACAAATCCTGAAATGTAGCA+TGG | + | chr3_4:62146222-62146241 | None:intergenic | 35.0% | |
| CTTAACATCACTTACAGACT+AGG | + | chr3_4:62146335-62146354 | None:intergenic | 35.0% | |
| ATCTTGGGTTTAACCAATAG+GGG | + | chr3_4:62146447-62146466 | None:intergenic | 35.0% | |
| ATACACGACAACTAGTAATG+CGG | + | chr3_4:62146513-62146532 | None:intergenic | 35.0% | |
| TGCTCTTGAGTGTTAGTAAA+TGG | - | chr3_4:62146632-62146651 | Msa0512390:intron | 35.0% | |
| GTAAATGGATGTTATGGATC+TGG | - | chr3_4:62146671-62146690 | Msa0512390:intron | 35.0% | |
| TCATCAGTGACACATAACTA+TGG | - | chr3_4:62147042-62147061 | Msa0512390:intron | 35.0% | |
| CATCAGTGACACATAACTAT+GGG | - | chr3_4:62147043-62147062 | Msa0512390:intron | 35.0% | |
| TTTCCATCTAAACTTGCAGA+AGG | + | chr3_4:62147135-62147154 | None:intergenic | 35.0% | |
| TGAGTTTAATCTTCCCCTAA+TGG | - | chr3_4:62147227-62147246 | Msa0512390:intron | 35.0% | |
| TCAAAAAGATCAGCCATTAG+GGG | + | chr3_4:62147243-62147262 | None:intergenic | 35.0% | |
| GTCAAAAAGATCAGCCATTA+GGG | + | chr3_4:62147244-62147263 | None:intergenic | 35.0% | |
| TGTCAAAAAGATCAGCCATT+AGG | + | chr3_4:62147245-62147264 | None:intergenic | 35.0% | |
| TACTGAAAAATAGAGGTGGA+AGG | + | chr3_4:62147358-62147377 | None:intergenic | 35.0% | |
| TGGATACTGAAAAATAGAGG+TGG | + | chr3_4:62147362-62147381 | None:intergenic | 35.0% | |
| ACGTGGATACTGAAAAATAG+AGG | + | chr3_4:62147365-62147384 | None:intergenic | 35.0% | |
| ! | CCTTTTCTTTGATTATCACG+TGG | + | chr3_4:62147382-62147401 | None:intergenic | 35.0% |
| CCACGTGATAATCAAAGAAA+AGG | - | chr3_4:62147379-62147398 | Msa0512390:CDS | 35.0% | |
| ACACATGAGAATTACTTTCC+CGG | - | chr3_4:62147604-62147623 | Msa0512390:intron | 35.0% | |
| ! | ATTGTCTGCATTTTCTTTCC+CGG | + | chr3_4:62147626-62147645 | None:intergenic | 35.0% |
| CTCATTGAGGTATAACATTG+TGG | - | chr3_4:62147712-62147731 | Msa0512390:intron | 35.0% | |
| TACTTAGACAGCAATGGAAA+GGG | + | chr3_4:62147947-62147966 | None:intergenic | 35.0% | |
| TTACTTAGACAGCAATGGAA+AGG | + | chr3_4:62147948-62147967 | None:intergenic | 35.0% | |
| ! | GTGTTTTACTTAGACAGCAA+TGG | + | chr3_4:62147953-62147972 | None:intergenic | 35.0% |
| TTTCTAATACACATGGACAG+AGG | - | chr3_4:62148070-62148089 | Msa0512390:intron | 35.0% | |
| AAGCATCATTTCAAGATACC+TGG | - | chr3_4:62148145-62148164 | Msa0512390:intron | 35.0% | |
| ATCATTTCAAGATACCTGGA+TGG | - | chr3_4:62148149-62148168 | Msa0512390:intron | 35.0% | |
| !! | TAATCATTGACTCCTTACTC+AGG | + | chr3_4:62148342-62148361 | None:intergenic | 35.0% |
| GTGCCTTCAAGATATAGTTA+AGG | + | chr3_4:62148452-62148471 | None:intergenic | 35.0% | |
| ACCTAACTTTCTTTACTTGC+AGG | + | chr3_4:62148708-62148727 | None:intergenic | 35.0% | |
| GAACATGTTAGTTGTAGACT+TGG | - | chr3_4:62148765-62148784 | Msa0512390:intron | 35.0% | |
| TTAGTTGTAGACTTGGAGAA+TGG | - | chr3_4:62148772-62148791 | Msa0512390:intron | 35.0% | |
| ATGCACCTCTCTAAATCAAA+TGG | + | chr3_4:62148850-62148869 | None:intergenic | 35.0% | |
| ! | TTTGATTTAGAGAGGTGCAT+TGG | - | chr3_4:62148850-62148869 | Msa0512390:intron | 35.0% |
| GGGTATATCTTAAATGTAGG+TGG | + | chr3_4:62149008-62149027 | None:intergenic | 35.0% | |
| GTTACATAGCAATCTTACCA+CGG | + | chr3_4:62149212-62149231 | None:intergenic | 35.0% | |
| !!! | GTTTTGGTTATTGAACAGGA+AGG | - | chr3_4:62149360-62149379 | Msa0512390:intron | 35.0% |
| AATTGCATTTACCTCCTCTA+AGG | + | chr3_4:62149702-62149721 | None:intergenic | 35.0% | |
| TTTCATCCTCAGTAACATAG+AGG | + | chr3_4:62149768-62149787 | None:intergenic | 35.0% | |
| ! | ATCATGATGATGTGTGTAGA+GGG | + | chr3_4:62149853-62149872 | None:intergenic | 35.0% |
| ! | TATCATGATGATGTGTGTAG+AGG | + | chr3_4:62149854-62149873 | None:intergenic | 35.0% |
| AGATCGGAAACGAGAAATGA+AGG | - | chr3_4:62143491-62143510 | Msa0512390:three_prime_UTR | 40.0% | |
| GAGAAATGAAGGATGATGAC+CGG | - | chr3_4:62143502-62143521 | Msa0512390:three_prime_UTR | 40.0% | |
| ! | ACATGGATTCAGGTTTGTTC+GGG | - | chr3_4:62143562-62143581 | Msa0512390:three_prime_UTR | 40.0% |
| TGACACATTACAAAAGGCTG+TGG | + | chr3_4:62143799-62143818 | None:intergenic | 40.0% | |
| CTGCGGTTAATTCCGTAAAA+CGG | - | chr3_4:62143871-62143890 | Msa0512390:exon | 40.0% | |
| !!! | TAAATGGAGCTGCCGTTTTA+CGG | + | chr3_4:62143886-62143905 | None:intergenic | 40.0% |
| CACAAGTAAAGCCTGGTAAA+TGG | + | chr3_4:62143902-62143921 | None:intergenic | 40.0% | |
| CATTTACCAGGCTTTACTTG+TGG | - | chr3_4:62143900-62143919 | Msa0512390:CDS | 40.0% | |
| ! | ATGGATTGAACTTCCTTCAC+CGG | + | chr3_4:62143961-62143980 | None:intergenic | 40.0% |
| TAGATGCAGAGTTCAGAACA+TGG | + | chr3_4:62143980-62143999 | None:intergenic | 40.0% | |
| GGAGGTGATGAAGATGTAAT+TGG | + | chr3_4:62144160-62144179 | None:intergenic | 40.0% | |
| AGAACAACAACTACCTCTTC+CGG | - | chr3_4:62144364-62144383 | Msa0512390:intron | 40.0% | |
| CAATTCGTCTTCCTCATTTC+AGG | - | chr3_4:62144513-62144532 | Msa0512390:intron | 40.0% | |
| ! | ATTCTTACTCAGGCACTGTT+TGG | - | chr3_4:62144563-62144582 | Msa0512390:intron | 40.0% |
| TAAGCTATCTTGGAGAGCTT+AGG | - | chr3_4:62144642-62144661 | Msa0512390:intron | 40.0% | |
| ACTTGTGAGACTGTTTGGAT+TGG | + | chr3_4:62144762-62144781 | None:intergenic | 40.0% | |
| CAAACACTTGTGAGACTGTT+TGG | + | chr3_4:62144767-62144786 | None:intergenic | 40.0% | |
| ! | TTGAGGACTAACTTGTCAGA+TGG | - | chr3_4:62145169-62145188 | Msa0512390:CDS | 40.0% |
| ! | ATAATGGAAATTACGCCCTG+AGG | + | chr3_4:62145226-62145245 | None:intergenic | 40.0% |
| ACCAACATTGTATCTTTCGG+AGG | - | chr3_4:62145261-62145280 | Msa0512390:intron | 40.0% | |
| AAGTTAGTCCTCGAATCACA+AGG | + | chr3_4:62145720-62145739 | None:intergenic | 40.0% | |
| ATGACCAACGCTGTATCTTT+CGG | - | chr3_4:62145815-62145834 | Msa0512390:intron | 40.0% | |
| GTATCTTTCGGTGGCTAATT+TGG | - | chr3_4:62145827-62145846 | Msa0512390:CDS | 40.0% | |
| ACCAGACTCGTCCAAAAATA+TGG | - | chr3_4:62145902-62145921 | Msa0512390:CDS | 40.0% | |
| !! | ATTTTTCTTGGTGCAGGTAC+CGG | + | chr3_4:62146041-62146060 | None:intergenic | 40.0% |
| !! | ACTAGCATTTTTCTTGGTGC+AGG | + | chr3_4:62146047-62146066 | None:intergenic | 40.0% |
| ACAGGACACTCGAGAAATAT+AGG | + | chr3_4:62146157-62146176 | None:intergenic | 40.0% | |
| TGTTCTCCATGCTACATTTC+AGG | - | chr3_4:62146213-62146232 | Msa0512390:CDS | 40.0% | |
| !! | TAGAAGAGGCACTCATGAAT+TGG | + | chr3_4:62146309-62146328 | None:intergenic | 40.0% |
| TACAGACTAGGAGTTAGAAG+AGG | + | chr3_4:62146323-62146342 | None:intergenic | 40.0% | |
| ACCTTCCTAGATAAAGAGAG+AGG | - | chr3_4:62146575-62146594 | Msa0512390:intron | 40.0% | |
| ATGTGCCTCTCTCTTTATCT+AGG | + | chr3_4:62146583-62146602 | None:intergenic | 40.0% | |
| ! | TAGATAAAGAGAGAGGCACA+TGG | - | chr3_4:62146582-62146601 | Msa0512390:intron | 40.0% |
| ! | AGATAAAGAGAGAGGCACAT+GGG | - | chr3_4:62146583-62146602 | Msa0512390:intron | 40.0% |
| ATCGAACTGATAACTGTTGC+AGG | - | chr3_4:62146982-62147001 | Msa0512390:intron | 40.0% | |
| TCTCGAAGATGATGACATAG+TGG | - | chr3_4:62147158-62147177 | Msa0512390:intron | 40.0% | |
| AGGGGAAGATTAAACTCATG+TGG | + | chr3_4:62147225-62147244 | None:intergenic | 40.0% | |
| ! | TGATCTTTTTGACAACCTCC+TGG | - | chr3_4:62147251-62147270 | Msa0512390:intron | 40.0% |
| AGGTGGAAGGATCATATACA+TGG | + | chr3_4:62147345-62147364 | None:intergenic | 40.0% | |
| TATATCCCATTTGCCAGAGA+CGG | - | chr3_4:62147432-62147451 | Msa0512390:CDS | 40.0% | |
| CACATGAGAATTACTTTCCC+GGG | - | chr3_4:62147605-62147624 | Msa0512390:intron | 40.0% | |
| ! | TTGTCTGCATTTTCTTTCCC+GGG | + | chr3_4:62147625-62147644 | None:intergenic | 40.0% |
| GGGAAAGAAAATGCAGACAA+TGG | - | chr3_4:62147625-62147644 | Msa0512390:intron | 40.0% | |
| AACACTTTCAGCGATAACAG+AGG | + | chr3_4:62147681-62147700 | None:intergenic | 40.0% | |
| ! | TCTGTTATCGCTGAAAGTGT+TGG | - | chr3_4:62147680-62147699 | Msa0512390:intron | 40.0% |
| TTGGAGCACATAACTCATTG+AGG | - | chr3_4:62147699-62147718 | Msa0512390:intron | 40.0% | |
| GGTATAACATTGTGGTTTCC+TGG | - | chr3_4:62147720-62147739 | Msa0512390:intron | 40.0% | |
| TTCTCCAAAAAGTTGCAAGC+TGG | - | chr3_4:62147880-62147899 | Msa0512390:CDS | 40.0% | |
| !!! | TTTCATTTTTTGGGGTTGGG+AGG | - | chr3_4:62148022-62148041 | Msa0512390:intron | 40.0% |
| AAACAATCAGCTTTCCATCC+AGG | + | chr3_4:62148166-62148185 | None:intergenic | 40.0% | |
| CTCATTTAGCAAGTATACCG+AGG | - | chr3_4:62148193-62148212 | Msa0512390:intron | 40.0% | |
| GCCTGCAAGTAAAGAAAGTT+AGG | - | chr3_4:62148704-62148723 | Msa0512390:intron | 40.0% | |
| ! | TTTAGAGAGGTGCATTGGAT+TGG | - | chr3_4:62148855-62148874 | Msa0512390:intron | 40.0% |
| ! | TTAGAGAGGTGCATTGGATT+GGG | - | chr3_4:62148856-62148875 | Msa0512390:intron | 40.0% |
| TCTCGTACAAGCTAAAGGAA+TGG | - | chr3_4:62149085-62149104 | Msa0512390:CDS | 40.0% | |
| CTCGTACAAGCTAAAGGAAT+GGG | - | chr3_4:62149086-62149105 | Msa0512390:CDS | 40.0% | |
| TCGTACAAGCTAAAGGAATG+GGG | - | chr3_4:62149087-62149106 | Msa0512390:CDS | 40.0% | |
| TCAACATTGTCGCAAACTCT+TGG | + | chr3_4:62149155-62149174 | None:intergenic | 40.0% | |
| GACAATGTTGACCTTGAAGT+GGG | - | chr3_4:62149164-62149183 | Msa0512390:CDS | 40.0% | |
| ACAATGTTGACCTTGAAGTG+GGG | - | chr3_4:62149165-62149184 | Msa0512390:CDS | 40.0% | |
| AACAGGAAGGAAGTTCAAGT+GGG | - | chr3_4:62149373-62149392 | Msa0512390:intron | 40.0% | |
| TGACCACATGAATCAAACTG+GGG | + | chr3_4:62149443-62149462 | None:intergenic | 40.0% | |
| CTGACCACATGAATCAAACT+GGG | + | chr3_4:62149444-62149463 | None:intergenic | 40.0% | |
| TCTGACCACATGAATCAAAC+TGG | + | chr3_4:62149445-62149464 | None:intergenic | 40.0% | |
| TGCATTTCAATGGACCTTAG+AGG | - | chr3_4:62149685-62149704 | Msa0512390:intron | 40.0% | |
| ATTTCAATGGACCTTAGAGG+AGG | - | chr3_4:62149688-62149707 | Msa0512390:intron | 40.0% | |
| TCAGTAACATAGAGGCTTCA+AGG | + | chr3_4:62149760-62149779 | None:intergenic | 40.0% | |
| TTGAAGCCTCTATGTTACTG+AGG | - | chr3_4:62149759-62149778 | Msa0512390:intron | 40.0% | |
| TTAATCGCTGTCGTTGTCGT+TGG | + | chr3_4:62143531-62143550 | None:intergenic | 45.0% | |
| CTTCGATAGTTAACTGCAGC+CGG | - | chr3_4:62143718-62143737 | Msa0512390:three_prime_UTR | 45.0% | |
| ATTTCGGTAGTTAACTGCCG+AGG | - | chr3_4:62143747-62143766 | Msa0512390:three_prime_UTR | 45.0% | |
| TTTCGGTAGTTAACTGCCGA+GGG | - | chr3_4:62143748-62143767 | Msa0512390:three_prime_UTR | 45.0% | |
| AAAAGACGAAAATGCCCCCT+CGG | + | chr3_4:62143767-62143786 | None:intergenic | 45.0% | |
| ! | CGTTTTACGGAATTAACCGC+AGG | + | chr3_4:62143873-62143892 | None:intergenic | 45.0% |
| GTCAATACATGCCAGCTTTC+TGG | + | chr3_4:62143936-62143955 | None:intergenic | 45.0% | |
| GAAATGCTGTCTTCTGAGTG+TGG | + | chr3_4:62144115-62144134 | None:intergenic | 45.0% | |
| CACTCAGAAGACAGCATTTC+CGG | - | chr3_4:62144115-62144134 | Msa0512390:intron | 45.0% | |
| ACAAAACCACGCTACCAACA+AGG | - | chr3_4:62144247-62144266 | Msa0512390:intron | 45.0% | |
| TAAGCGTGAACGAACCTTGT+TGG | + | chr3_4:62144264-62144283 | None:intergenic | 45.0% | |
| AGATGAGGAGGTTGAAATGC+CGG | - | chr3_4:62144829-62144848 | Msa0512390:intron | 45.0% | |
| ! | AATGCATGTTTTGTGGCCTC+AGG | - | chr3_4:62145207-62145226 | Msa0512390:intron | 45.0% |
| ! | ATGCATGTTTTGTGGCCTCA+GGG | - | chr3_4:62145208-62145227 | Msa0512390:intron | 45.0% |
| GCCTCCGAAAGATACAATGT+TGG | + | chr3_4:62145265-62145284 | None:intergenic | 45.0% | |
| ! | GTATCTTTCGGAGGCTAGTT+TGG | - | chr3_4:62145270-62145289 | Msa0512390:intron | 45.0% |
| TCAGAAGTTGCTCGAAGATG+AGG | - | chr3_4:62145378-62145397 | Msa0512390:intron | 45.0% | |
| AGATGAGGAGGTTGAAATGC+CGG | - | chr3_4:62144829-62144848 | Msa0512390:intron | 45.0% | |
| TGAAATGCCGGACTTCAATG+AGG | - | chr3_4:62145405-62145424 | Msa0512390:intron | 45.0% | |
| GAAATGCCGGACTTCAATGA+GGG | - | chr3_4:62145406-62145425 | Msa0512390:intron | 45.0% | |
| TTGTCACCCTCATTGAAGTC+CGG | + | chr3_4:62145415-62145434 | None:intergenic | 45.0% | |
| ACTTCAATGAGGGTGACAAC+CGG | - | chr3_4:62145416-62145435 | Msa0512390:intron | 45.0% | |
| GGTGACAACCGGAATGAATT+GGG | - | chr3_4:62145427-62145446 | Msa0512390:CDS | 45.0% | |
| ! | TCGAGGACTAACTTGTCTGA+TGG | - | chr3_4:62145726-62145745 | Msa0512390:CDS | 45.0% |
| AATGCATGTATAGTGGCCTC+AGG | - | chr3_4:62145764-62145783 | Msa0512390:intron | 45.0% | |
| ATGCATGTATAGTGGCCTCA+GGG | - | chr3_4:62145765-62145784 | Msa0512390:intron | 45.0% | |
| ACAATGGAAATTACGCCCTG+AGG | + | chr3_4:62145783-62145802 | None:intergenic | 45.0% | |
| !!! | GCCATATTTTTGGACGAGTC+TGG | + | chr3_4:62145906-62145925 | None:intergenic | 45.0% |
| !! | TGCTTTTGAGAAGGTCGCAT+GGG | + | chr3_4:62146011-62146030 | None:intergenic | 45.0% |
| !! | TTGCTTTTGAGAAGGTCGCA+TGG | + | chr3_4:62146012-62146031 | None:intergenic | 45.0% |
| GCCTCTCTCTTTATCTAGGA+AGG | + | chr3_4:62146579-62146598 | None:intergenic | 45.0% | |
| ! | ATCTTGCTGTACGTGCAGTT+TGG | - | chr3_4:62146809-62146828 | Msa0512390:intron | 45.0% |
| TGATAACTGTTGCAGGCATC+TGG | - | chr3_4:62146989-62147008 | Msa0512390:intron | 45.0% | |
| ! | AGGCATCTGGAACAAAGCTA+AGG | - | chr3_4:62147002-62147021 | Msa0512390:intron | 45.0% |
| ACACATAACTATGGGCACAC+TGG | - | chr3_4:62147051-62147070 | Msa0512390:intron | 45.0% | |
| AGGCCTTCTGCAAGTTTAGA+TGG | - | chr3_4:62147129-62147148 | Msa0512390:intron | 45.0% | |
| AGCTTCAGTTTCAGAAGGCT+CGG | + | chr3_4:62147199-62147218 | None:intergenic | 45.0% | |
| CTGGATAAGACTGATCTGGT+GGG | - | chr3_4:62147270-62147289 | Msa0512390:intron | 45.0% | |
| AACAACCGTCTCTGGCAAAT+GGG | + | chr3_4:62147440-62147459 | None:intergenic | 45.0% | |
| CGGATCATCAAGTGACAATG+AGG | - | chr3_4:62147492-62147511 | Msa0512390:intron | 45.0% | |
| GCAGGCGATGCAAAAAGAAA+AGG | - | chr3_4:62147843-62147862 | Msa0512390:CDS | 45.0% | |
| ! | AGCTCCAGCTTGCAACTTTT+TGG | + | chr3_4:62147887-62147906 | None:intergenic | 45.0% |
| ! | GAAGCATTTCGTGCAACCTA+TGG | + | chr3_4:62148234-62148253 | None:intergenic | 45.0% |
| TATCCTAGAATGCACCCTCA+AGG | - | chr3_4:62148300-62148319 | Msa0512390:intron | 45.0% | |
| CCTTGAAATCAAGGCCTTGA+GGG | + | chr3_4:62148317-62148336 | None:intergenic | 45.0% | |
| CCTCAAGGCCTTGATTTCAA+GGG | - | chr3_4:62148315-62148334 | Msa0512390:intron | 45.0% | |
| ACTCAGGACCCTTGAAATCA+AGG | + | chr3_4:62148326-62148345 | None:intergenic | 45.0% | |
| GATTTCAAGGGTCCTGAGTA+AGG | - | chr3_4:62148327-62148346 | Msa0512390:intron | 45.0% | |
| TTGCAGGCTGCAGCTTATAA+TGG | + | chr3_4:62148692-62148711 | None:intergenic | 45.0% | |
| TGGAGAATGGAGACTCATGA+TGG | - | chr3_4:62148785-62148804 | Msa0512390:intron | 45.0% | |
| CAAGCTAAAGGAATGGGGTT+TGG | - | chr3_4:62149092-62149111 | Msa0512390:CDS | 45.0% | |
| CGACAATGTTGACCTTGAAG+TGG | - | chr3_4:62149163-62149182 | Msa0512390:CDS | 45.0% | |
| CATAGCAATCTTACCACGGA+GGG | + | chr3_4:62149208-62149227 | None:intergenic | 45.0% | |
| ACATAGCAATCTTACCACGG+AGG | + | chr3_4:62149209-62149228 | None:intergenic | 45.0% | |
| GAACAGGAAGGAAGTTCAAG+TGG | - | chr3_4:62149372-62149391 | Msa0512390:intron | 45.0% | |
| GACCACATGAATCAAACTGG+GGG | + | chr3_4:62149442-62149461 | None:intergenic | 45.0% | |
| TCGATAGTAAAAAAGGGGCG+TGG | - | chr3_4:62149660-62149679 | Msa0512390:intron | 45.0% | |
| ! | CGATAGTAAAAAAGGGGCGT+GGG | - | chr3_4:62149661-62149680 | Msa0512390:intron | 45.0% |
| ! | CTGCAGCCGGCTCAAAATTT+CGG | - | chr3_4:62143731-62143750 | Msa0512390:three_prime_UTR | 50.0% |
| TTCGGTAGTTAACTGCCGAG+GGG | - | chr3_4:62143749-62143768 | Msa0512390:three_prime_UTR | 50.0% | |
| AAACGGCAGCTCCATTTACC+AGG | - | chr3_4:62143888-62143907 | Msa0512390:exon | 50.0% | |
| GATTGAACTTCCTTCACCGG+CGG | + | chr3_4:62143958-62143977 | None:intergenic | 50.0% | |
| CAGTAGATTTACGTACGCGG+AGG | + | chr3_4:62144014-62144033 | None:intergenic | 50.0% | |
| !! | AACGAACCTTGTTGGTAGCG+TGG | + | chr3_4:62144256-62144275 | None:intergenic | 50.0% |
| AAATCTAATCGCGCCGGAAG+AGG | + | chr3_4:62144380-62144399 | None:intergenic | 50.0% | |
| TCAGAAGTCGCTCGAAGATG+AGG | - | chr3_4:62144814-62144833 | Msa0512390:intron | 50.0% | |
| TGAAATGCCGGACTTCAACG+AGG | - | chr3_4:62144841-62144860 | Msa0512390:intron | 50.0% | |
| GAAATGCCGGACTTCAACGA+GGG | - | chr3_4:62144842-62144861 | Msa0512390:intron | 50.0% | |
| TTGTCACCCTCGTTGAAGTC+CGG | + | chr3_4:62144851-62144870 | None:intergenic | 50.0% | |
| GGTGACAACCGCGATGTATT+GGG | - | chr3_4:62144863-62144882 | Msa0512390:intron | 50.0% | |
| GAAGTTGCTCGAAGATGAGG+AGG | - | chr3_4:62145381-62145400 | Msa0512390:intron | 50.0% | |
| GGGTGACAACCGGAATGAAT+TGG | - | chr3_4:62145426-62145445 | Msa0512390:CDS | 50.0% | |
| CAACCGGAATGAATTGGGAG+AGG | - | chr3_4:62145432-62145451 | Msa0512390:CDS | 50.0% | |
| CCACCTCTCCCAATTCATTC+CGG | + | chr3_4:62145438-62145457 | None:intergenic | 50.0% | |
| ACCAACGCTGTATCTTTCGG+TGG | - | chr3_4:62145818-62145837 | Msa0512390:intron | 50.0% | |
| GGACGAGCTTCAGTTTCAGA+AGG | + | chr3_4:62147204-62147223 | None:intergenic | 50.0% | |
| ! | CCAGATCAGTCTTATCCAGG+AGG | + | chr3_4:62147269-62147288 | None:intergenic | 50.0% |
| CCTCCTGGATAAGACTGATC+TGG | - | chr3_4:62147266-62147285 | Msa0512390:intron | 50.0% | |
| ! | CCACCAGATCAGTCTTATCC+AGG | + | chr3_4:62147272-62147291 | None:intergenic | 50.0% |
| CCTGGATAAGACTGATCTGG+TGG | - | chr3_4:62147269-62147288 | Msa0512390:intron | 50.0% | |
| GATAAGACTGATCTGGTGGG+TGG | - | chr3_4:62147273-62147292 | Msa0512390:intron | 50.0% | |
| CAACAACCGTCTCTGGCAAA+TGG | + | chr3_4:62147441-62147460 | None:intergenic | 50.0% | |
| ATCCGCTATCCACAGGTTCA+GGG | + | chr3_4:62147477-62147496 | None:intergenic | 50.0% | |
| ! | CTTGATGATCCGCTATCCAC+AGG | + | chr3_4:62147484-62147503 | None:intergenic | 50.0% |
| CCCTCAAGGCCTTGATTTCA+AGG | - | chr3_4:62148314-62148333 | Msa0512390:intron | 50.0% | |
| CCCTTGAAATCAAGGCCTTG+AGG | + | chr3_4:62148318-62148337 | None:intergenic | 50.0% | |
| GCTAAAGGAATGGGGTTTGG+TGG | - | chr3_4:62149095-62149114 | Msa0512390:CDS | 50.0% | |
| GGATTAAGCTCCCCACTTCA+AGG | + | chr3_4:62149178-62149197 | None:intergenic | 50.0% | |
| TAATCCGTATTCACCCTCCG+TGG | - | chr3_4:62149192-62149211 | Msa0512390:CDS | 50.0% | |
| CTTACCACGGAGGGTGAATA+CGG | + | chr3_4:62149199-62149218 | None:intergenic | 50.0% | |
| CACCCCCAGTTTGATTCATG+TGG | - | chr3_4:62149437-62149456 | Msa0512390:intron | 50.0% | |
| GGTCGTAATCATGCTGCTGA+TGG | - | chr3_4:62149805-62149824 | Msa0512390:CDS | 50.0% | |
| CTGTCGTTGTCGTTGGAAGC+CGG | + | chr3_4:62143524-62143543 | None:intergenic | 55.0% | |
| ! | TCCTCGGTACTTAAGTGCCG+AGG | - | chr3_4:62143647-62143666 | Msa0512390:three_prime_UTR | 55.0% |
| ! | ACCTCGGCACTTAAGTACCG+AGG | + | chr3_4:62143651-62143670 | None:intergenic | 55.0% |
| TCGGTAGTTAACTGCCGAGG+GGG | - | chr3_4:62143750-62143769 | Msa0512390:three_prime_UTR | 55.0% | |
| GTTCGGCCACAAGTAAAGCC+TGG | + | chr3_4:62143909-62143928 | None:intergenic | 55.0% | |
| !! | GCCAGCTTTCTGGCTGAGTT+CGG | + | chr3_4:62143926-62143945 | None:intergenic | 55.0% |
| ! | AGCTGGCATGTATTGACCGC+CGG | - | chr3_4:62143939-62143958 | Msa0512390:CDS | 55.0% |
| ! | CATGTATTGACCGCCGGTGA+AGG | - | chr3_4:62143945-62143964 | Msa0512390:intron | 55.0% |
| GCGTAATGGTCGTCGTCATC+TGG | + | chr3_4:62144212-62144231 | None:intergenic | 55.0% | |
| GAAGTCGCTCGAAGATGAGG+AGG | - | chr3_4:62144817-62144836 | Msa0512390:intron | 55.0% | |
| GGGTGACAACCGCGATGTAT+TGG | - | chr3_4:62144862-62144881 | Msa0512390:intron | 55.0% | |
| CAACCGCGATGTATTGGGAG+AGG | - | chr3_4:62144868-62144887 | Msa0512390:intron | 55.0% | |
| CCACCTCTCCCAATACATCG+CGG | + | chr3_4:62144874-62144893 | None:intergenic | 55.0% | |
| ! | GGGAGAGGTGGTTGCTGATT+CGG | - | chr3_4:62144883-62144902 | Msa0512390:intron | 55.0% |
| CCGGAATGAATTGGGAGAGG+TGG | - | chr3_4:62145435-62145454 | Msa0512390:CDS | 55.0% | |
| ! | GGGAGAGGTGGTTGCTGATT+CGG | - | chr3_4:62144883-62144902 | Msa0512390:intron | 55.0% |
| GCCACCGAAAGATACAGCGT+TGG | + | chr3_4:62145822-62145841 | None:intergenic | 55.0% | |
| TTTGGACGAGTCTGGTCGAG+AGG | + | chr3_4:62145898-62145917 | None:intergenic | 55.0% | |
| TCCCCTGAACCTGTGGATAG+CGG | - | chr3_4:62147472-62147491 | Msa0512390:intron | 55.0% | |
| TCCGCTATCCACAGGTTCAG+GGG | + | chr3_4:62147476-62147495 | None:intergenic | 55.0% | |
| GATCCGCTATCCACAGGTTC+AGG | + | chr3_4:62147478-62147497 | None:intergenic | 55.0% | |
| CAAGCTGGAGCTAGACCAGA+TGG | - | chr3_4:62147895-62147914 | Msa0512390:CDS | 55.0% | |
| ! | AGGCCTTGAGGGTGCATTCT+AGG | + | chr3_4:62148306-62148325 | None:intergenic | 55.0% |
| !! | GGGTTTGGTGGCAGCAAAGA+TGG | - | chr3_4:62149107-62149126 | Msa0512390:CDS | 55.0% |
| ! | GGGCGTGGGTTGCATTTCAA+TGG | - | chr3_4:62149675-62149694 | Msa0512390:intron | 55.0% |
| GCCGAACTCAGCCAGAAAGC+TGG | - | chr3_4:62143922-62143941 | Msa0512390:CDS | 60.0% | |
| CCGCGATGTATTGGGAGAGG+TGG | - | chr3_4:62144871-62144890 | Msa0512390:intron | 60.0% | |
| TGACGACTCCCCTGAACCTG+TGG | - | chr3_4:62147465-62147484 | Msa0512390:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 62143463 | 62149876 | 62143463 | ID=Msa0512390;Name=Msa0512390 |
| chr3_4 | mRNA | 62143463 | 62149876 | 62143463 | ID=Msa0512390-mRNA-1;Parent=Msa0512390;Name=Msa0512390-mRNA-1;_AED=0.15;_eAED=0.12;_QI=44|0.76|0.71|1|0.69|0.78|14|426|537 |
| chr3_4 | exon | 62143463 | 62143961 | 62143463 | ID=Msa0512390-mRNA-1:exon:15345;Parent=Msa0512390-mRNA-1 |
| chr3_4 | exon | 62144126 | 62144259 | 62144126 | ID=Msa0512390-mRNA-1:exon:15344;Parent=Msa0512390-mRNA-1 |
| chr3_4 | exon | 62145125 | 62145216 | 62145125 | ID=Msa0512390-mRNA-1:exon:15343;Parent=Msa0512390-mRNA-1 |
| chr3_4 | exon | 62145423 | 62145520 | 62145423 | ID=Msa0512390-mRNA-1:exon:15342;Parent=Msa0512390-mRNA-1 |
| chr3_4 | exon | 62145619 | 62145746 | 62145619 | ID=Msa0512390-mRNA-1:exon:15341;Parent=Msa0512390-mRNA-1 |
| chr3_4 | exon | 62145826 | 62145963 | 62145826 | ID=Msa0512390-mRNA-1:exon:15340;Parent=Msa0512390-mRNA-1 |
| chr3_4 | exon | 62146052 | 62146335 | 62146052 | ID=Msa0512390-mRNA-1:exon:15339;Parent=Msa0512390-mRNA-1 |
| chr3_4 | exon | 62147299 | 62147455 | 62147299 | ID=Msa0512390-mRNA-1:exon:15338;Parent=Msa0512390-mRNA-1 |
| chr3_4 | exon | 62147841 | 62147957 | 62147841 | ID=Msa0512390-mRNA-1:exon:15337;Parent=Msa0512390-mRNA-1 |
| chr3_4 | exon | 62148405 | 62148451 | 62148405 | ID=Msa0512390-mRNA-1:exon:15336;Parent=Msa0512390-mRNA-1 |
| chr3_4 | exon | 62148932 | 62148983 | 62148932 | ID=Msa0512390-mRNA-1:exon:15335;Parent=Msa0512390-mRNA-1 |
| chr3_4 | exon | 62149071 | 62149233 | 62149071 | ID=Msa0512390-mRNA-1:exon:15334;Parent=Msa0512390-mRNA-1 |
| chr3_4 | exon | 62149379 | 62149442 | 62149379 | ID=Msa0512390-mRNA-1:exon:15333;Parent=Msa0512390-mRNA-1 |
| chr3_4 | exon | 62149766 | 62149876 | 62149766 | ID=Msa0512390-mRNA-1:exon:15332;Parent=Msa0512390-mRNA-1 |
| chr3_4 | five_prime_UTR | 62149833 | 62149876 | 62149833 | ID=Msa0512390-mRNA-1:five_prime_utr;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62149766 | 62149832 | 62149766 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62149379 | 62149442 | 62149379 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62149071 | 62149233 | 62149071 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62148932 | 62148983 | 62148932 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62148405 | 62148451 | 62148405 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62147841 | 62147957 | 62147841 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62147299 | 62147455 | 62147299 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62146052 | 62146335 | 62146052 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62145826 | 62145963 | 62145826 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62145619 | 62145746 | 62145619 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62145423 | 62145520 | 62145423 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62145125 | 62145216 | 62145125 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62144126 | 62144259 | 62144126 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | CDS | 62143889 | 62143961 | 62143889 | ID=Msa0512390-mRNA-1:cds;Parent=Msa0512390-mRNA-1 |
| chr3_4 | three_prime_UTR | 62143463 | 62143888 | 62143463 | ID=Msa0512390-mRNA-1:three_prime_utr;Parent=Msa0512390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
