AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1415640


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1415640 MtrunA17_Chr3g0138361 85.385 260 30 2 1 256 1 256 3.57e-153 427
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1415640 AT4G32560.4 46.667 240 126 1 15 252 22 261 3.28e-62 197
Msa1415640 AT4G32560.3 46.667 240 126 1 15 252 45 284 6.27e-62 197
Msa1415640 AT4G32560.1 46.667 240 126 1 15 252 47 286 6.86e-62 197
Msa1415640 AT4G32560.2 46.667 240 126 1 15 252 47 286 6.86e-62 197

Find 66 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTACCTACAATGCTCTTT+TGG 0.238498 tig0024251:+68383 Msa1415640:CDS
AAGAGTTGATTTGATGAAAA+AGG 0.251538 tig0024251:+67350 Msa1415640:CDS
AACTTCGATGAGTGGCAATT+TGG 0.253638 tig0024251:+66961 Msa1415640:exon
TTGGAATAATCTCCATTTAC+AGG 0.293628 tig0024251:-73426 None:intergenic
TTCCAATCGGCCAAAGGATT+GGG 0.306996 tig0024251:+73443 Msa1415640:three_prime_UTR
AATAAAAGAATTGATGTTAA+AGG 0.310913 tig0024251:+68407 Msa1415640:CDS
TGATTTCGAGCGTAGGTAAC+AGG 0.318384 tig0024251:-66845 None:intergenic
AGTATGAATTTATAATAATA+AGG 0.333722 tig0024251:-73514 None:intergenic
TATTTCCAAAAGAGCATTGT+AGG 0.361022 tig0024251:-68388 None:intergenic
AGCTCACAATACCATGGTTA+TGG 0.369500 tig0024251:+73256 Msa1415640:three_prime_UTR
GACAAATCTTAATGATCTTA+AGG 0.372253 tig0024251:+72068 Msa1415640:CDS
ATTAAGAGAGAGAATCAATA+AGG 0.380556 tig0024251:+67042 Msa1415640:CDS
CTTACTGGACGATTTCTGAT+TGG 0.404896 tig0024251:-67540 None:intergenic
ATTGGAGTGCCCCAATCCTT+TGG 0.408856 tig0024251:-73453 None:intergenic
ATTCCAATCGGCCAAAGGAT+TGG 0.422827 tig0024251:+73442 Msa1415640:three_prime_UTR
TACTTTCATATAATAATCAA+TGG 0.430436 tig0024251:+66926 Msa1415640:five_prime_UTR
GCTCCACAACATTCATCTTC+CGG 0.435244 tig0024251:-67009 None:intergenic
AATTTATAATAATAAGGATA+AGG 0.437533 tig0024251:-73508 None:intergenic
GCCCCAATCCTTTGGCCGAT+TGG 0.442457 tig0024251:-73445 None:intergenic
TCCCTTGACAATTCCTTCCA+TGG 0.449854 tig0024251:-70003 None:intergenic
GCTCACAATACCATGGTTAT+GGG 0.451293 tig0024251:+73257 Msa1415640:three_prime_UTR
AATTGTCAAGGGAAGTGAAC+AGG 0.458713 tig0024251:+70013 Msa1415640:CDS
AGGAACTTGCTGCTAGACTA+AGG 0.460208 tig0024251:+67476 Msa1415640:intron
TATAAAGCTTGTTCATTCCA+TGG 0.467664 tig0024251:+69986 Msa1415640:CDS
GAGTGGCAATTTGGATGAAC+TGG 0.470793 tig0024251:+66970 Msa1415640:CDS
TTGACACCGTAACTTCTCCT+TGG 0.470807 tig0024251:-73148 None:intergenic
CAATTCAATCAAGTCTTTGA+AGG 0.479320 tig0024251:+67096 Msa1415640:CDS
ATTGAATTCGATCATTTCAC+AGG 0.492974 tig0024251:+68440 Msa1415640:CDS
TGGTTTGTGAGATTGATTGC+CGG 0.503885 tig0024251:+66990 Msa1415640:CDS
AGAGAGAGAATCAATAAGGA+AGG 0.516554 tig0024251:+67046 Msa1415640:CDS
CAGTCAAAGCGGATCGATGA+TGG 0.517423 tig0024251:+73228 Msa1415640:CDS
TACCTTATTGCAGTTTCAAG+AGG 0.525372 tig0024251:+69941 Msa1415640:intron
AGTTCAGGATCTTGAAAGGA+AGG 0.526031 tig0024251:+67191 Msa1415640:intron
CATTCTCTTAGCGAATCACT+TGG 0.532694 tig0024251:+67327 Msa1415640:CDS
AAGCTTGTTCATTCCATGGA+AGG 0.540003 tig0024251:+69990 Msa1415640:CDS
AAACTACGAAAGGTTCAACT+AGG 0.544419 tig0024251:+72030 Msa1415640:CDS
CGATTTCTGATTGGCACGGT+AGG 0.549963 tig0024251:-67531 None:intergenic
TAAATGGAGATTATTCCAAT+CGG 0.553466 tig0024251:+73430 Msa1415640:three_prime_UTR
CTTGTGTTGATTTCGAGCGT+AGG 0.561243 tig0024251:-66852 None:intergenic
TTCCATGGAAGGAATTGTCA+AGG 0.564214 tig0024251:+70001 Msa1415640:CDS
TCCAATCGGCCAAAGGATTG+GGG 0.567106 tig0024251:+73444 Msa1415640:three_prime_UTR
TCTTAGTTCAGGATCTTGAA+AGG 0.575221 tig0024251:+67187 Msa1415640:intron
AGAACTGTATGCTCAAATCC+AGG 0.575284 tig0024251:+68176 Msa1415640:CDS
ACGACCATCAGTGCTACTAA+AGG 0.575612 tig0024251:-69964 None:intergenic
GAGCATACAGTTCTGAGAGC+CGG 0.578341 tig0024251:-68167 None:intergenic
AATGCTCCAAGGAGAAGTTA+CGG 0.584884 tig0024251:+73142 Msa1415640:CDS
GAGGCCTTTAGTAGCACTGA+TGG 0.586647 tig0024251:+69960 Msa1415640:CDS
GATAGATATGCCGCAGCAGT+CGG 0.593565 tig0024251:+72090 Msa1415640:CDS
AGATTATTCCAATCGGCCAA+AGG 0.597029 tig0024251:+73437 Msa1415640:three_prime_UTR
GATTTCGAGCGTAGGTAACA+GGG 0.598671 tig0024251:-66844 None:intergenic
CTTAACACAACTTCGATGAG+TGG 0.606083 tig0024251:+66953 Msa1415640:exon
CTGAGATTAATGAATTAGAG+AGG 0.628262 tig0024251:+67262 Msa1415640:CDS
AACTACGAAAGGTTCAACTA+GGG 0.640484 tig0024251:+72031 Msa1415640:CDS
TCCATGGAAGGAATTGTCAA+GGG 0.644066 tig0024251:+70002 Msa1415640:CDS
TTGCCGGAAGATGAATGTTG+TGG 0.644134 tig0024251:+67006 Msa1415640:CDS
GGAACTTGCTGCTAGACTAA+GGG 0.645439 tig0024251:+67477 Msa1415640:intron
TTATAAACTGATGCGAGCTG+CGG 0.645761 tig0024251:+73300 Msa1415640:three_prime_UTR
CTTATGCTCACCGACTGCTG+CGG 0.652781 tig0024251:-72100 None:intergenic
GAAAATTGCTGACGTCTCTG+AGG 0.657782 tig0024251:+73181 Msa1415640:CDS
TGGACGATTTCTGATTGGCA+CGG 0.669366 tig0024251:-67535 None:intergenic
GCTTGTGCAGGTATGAACAC+CGG 0.672424 tig0024251:+68148 Msa1415640:intron
AATATTTGCATCAGTCAAAG+CGG 0.676651 tig0024251:+73217 Msa1415640:CDS
ATCTTGTTAACCCATAACCA+TGG 0.686727 tig0024251:-73267 None:intergenic
ATATGTACAGAAACTACGAA+AGG 0.693870 tig0024251:+72020 Msa1415640:intron
GTCACAAGCTCACAATACCA+TGG 0.697448 tig0024251:+73250 Msa1415640:three_prime_UTR
AGGAAAATAGCAAATGACTG+TGG 0.704917 tig0024251:+67282 Msa1415640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGATTTTTTTTTTTTTTTTG+TGG - tig0024251:69161-69180 None:intergenic 10.0%
!! ATTATATAACTATTTATGTT+GGG - tig0024251:72869-72888 None:intergenic 10.0%
!! TATTATATAACTATTTATGT+TGG - tig0024251:72870-72889 None:intergenic 10.0%
!! AACATAAATAGTTATATAAT+AGG + tig0024251:72869-72888 Msa1415640:intron 10.0%
!!! AATTAAATAAAAGTTTTGTA+TGG + tig0024251:73378-73397 Msa1415640:three_prime_UTR 10.0%
!! GAAAATAGTAAAAAATAAAT+TGG - tig0024251:73474-73493 None:intergenic 10.0%
!!! TATTTTTTACTATTTTCAAA+TGG + tig0024251:73477-73496 Msa1415640:three_prime_UTR 10.0%
!! AATTTATAATAATAAGGATA+AGG - tig0024251:73511-73530 None:intergenic 10.0%
!! AGTATGAATTTATAATAATA+AGG - tig0024251:73517-73536 None:intergenic 10.0%
!! TACTTTCATATAATAATCAA+TGG + tig0024251:66926-66945 Msa1415640:five_prime_UTR 15.0%
!!! ATAAAAGTAATTGATAATAC+GGG - tig0024251:67633-67652 None:intergenic 15.0%
!!! GATAAAAGTAATTGATAATA+CGG - tig0024251:67634-67653 None:intergenic 15.0%
!!! TGGAATATATTGTTATTTAT+TGG + tig0024251:68110-68129 Msa1415640:intron 15.0%
!! AATAAAAGAATTGATGTTAA+AGG + tig0024251:68407-68426 Msa1415640:CDS 15.0%
!!! AAAGATTGCATTTTTTAAAA+GGG - tig0024251:68713-68732 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTTTGTGG+TGG - tig0024251:69158-69177 None:intergenic 15.0%
!!! TTTTATTGCATCTTTTAATT+TGG + tig0024251:69751-69770 Msa1415640:intron 15.0%
!! TACATAATTTATAGATATCA+AGG - tig0024251:70674-70693 None:intergenic 15.0%
!! ATTATAAGATTAAAGCTAAA+TGG + tig0024251:71017-71036 Msa1415640:intron 15.0%
!! TTATAAGATTAAAGCTAAAT+GGG + tig0024251:71018-71037 Msa1415640:intron 15.0%
!! AATGATCAATAAAATAAAAG+AGG - tig0024251:71590-71609 None:intergenic 15.0%
!! TATACAATTTATAGATATCA+AGG - tig0024251:72580-72599 None:intergenic 15.0%
!!! AATTTTTTAGTTAAATACTC+TGG + tig0024251:72661-72680 Msa1415640:intron 15.0%
!! AGTTAAATTAGAAAACTTAT+AGG - tig0024251:72774-72793 None:intergenic 15.0%
!!! TAATTATTTTAGAATGTCCT+TGG + tig0024251:68314-68333 Msa1415640:intron 20.0%
!! AAAATAAATAGAATGGCAAA+AGG - tig0024251:68619-68638 None:intergenic 20.0%
!!! CAAAGATTGCATTTTTTAAA+AGG - tig0024251:68714-68733 None:intergenic 20.0%
!! TACACCTTAATCTATATTAA+TGG - tig0024251:69541-69560 None:intergenic 20.0%
!!! AAGAATTTGAGATCTAATAA+AGG + tig0024251:69577-69596 Msa1415640:intron 20.0%
!!! TTTAAGTTCAAGAAACATTA+TGG - tig0024251:69803-69822 None:intergenic 20.0%
!! AAATAAGATGATGAAATGTT+AGG - tig0024251:69859-69878 None:intergenic 20.0%
!! GTCAATATAATTAAATGCAA+GGG - tig0024251:70330-70349 None:intergenic 20.0%
!!! TTTTGCTTGAATCTTATAAT+TGG - tig0024251:70401-70420 None:intergenic 20.0%
!! ATTATAAGATTCAAGCAAAA+TGG + tig0024251:70401-70420 Msa1415640:intron 20.0%
!! TTATAAGATTCAAGCAAAAT+GGG + tig0024251:70402-70421 Msa1415640:intron 20.0%
!! ACAACTATTAATCATGAAAT+GGG - tig0024251:70629-70648 None:intergenic 20.0%
!! TCATTTAGAAAGATTTGATT+CGG + tig0024251:70728-70747 Msa1415640:intron 20.0%
!!! ATATTTTTACTGTACAATGT+TGG + tig0024251:71099-71118 Msa1415640:intron 20.0%
!!! TATTTTTACTGTACAATGTT+GGG + tig0024251:71100-71119 Msa1415640:intron 20.0%
!!! AAATATGTGAAAGGATTTTA+TGG + tig0024251:71448-71467 Msa1415640:intron 20.0%
!! TTATCCAAATAATAATCAGA+AGG - tig0024251:71805-71824 None:intergenic 20.0%
!! AAAACTCAAATGGTAATATA+AGG - tig0024251:71920-71939 None:intergenic 20.0%
!! GAAAAATAACAAAACTCAAA+TGG - tig0024251:71930-71949 None:intergenic 20.0%
!!! GTAGAATAGTTTTAGTTTTT+TGG + tig0024251:72193-72212 Msa1415640:intron 20.0%
!! GATTAAACCTAATGAAAATT+TGG - tig0024251:72221-72240 None:intergenic 20.0%
!! ACATTTATTAACCATGAAAT+GGG - tig0024251:72271-72290 None:intergenic 20.0%
!!! TACATATTTTGTAGATATCA+AGG - tig0024251:72316-72335 None:intergenic 20.0%
!! TAAACACTTATGAAACTATT+TGG + tig0024251:72723-72742 Msa1415640:intron 20.0%
!! AAACACTTATGAAACTATTT+GGG + tig0024251:72724-72743 Msa1415640:intron 20.0%
!! TAACTTATGAAAACAACTTA+TGG + tig0024251:72789-72808 Msa1415640:intron 20.0%
!! AGCTATTTGATAAGTAAAAA+CGG - tig0024251:73103-73122 None:intergenic 20.0%
!! TATCAAATAGCTTTCTTTAA+TGG + tig0024251:73111-73130 Msa1415640:intron 20.0%
! ATTAAGAGAGAGAATCAATA+AGG + tig0024251:67042-67061 Msa1415640:CDS 25.0%
!!! TTGAATATAATGTGTTGCTT+AGG + tig0024251:67156-67175 Msa1415640:intron 25.0%
!!! AAGAGTTGATTTGATGAAAA+AGG + tig0024251:67350-67369 Msa1415640:CDS 25.0%
! AAAAAGGTAACAATTAGCAT+TGG + tig0024251:67366-67385 Msa1415640:intron 25.0%
! AAAAGGTAACAATTAGCATT+GGG + tig0024251:67367-67386 Msa1415640:intron 25.0%
! GTTTGTAGTAATTGAAACAA+TGG - tig0024251:67435-67454 None:intergenic 25.0%
! GTATAAAGAAACAAACTTAC+TGG - tig0024251:67558-67577 None:intergenic 25.0%
! TCATTCAAGAAAGAGTTATA+CGG - tig0024251:67582-67601 None:intergenic 25.0%
! AAATATTCTAGACACTTGTA+GGG - tig0024251:67660-67679 None:intergenic 25.0%
! AGATCTAAAGATTAATGAGT+TGG + tig0024251:67923-67942 Msa1415640:intron 25.0%
! TGGTATATGATAGAACATTA+TGG + tig0024251:67955-67974 Msa1415640:intron 25.0%
! ATCAAAAGAATTTATGAACC+TGG - tig0024251:68197-68216 None:intergenic 25.0%
!! AAAAGTGAAAAAGTTTTGCT+AGG + tig0024251:68239-68258 Msa1415640:intron 25.0%
!! AAAGTGAAAAAGTTTTGCTA+GGG + tig0024251:68240-68259 Msa1415640:intron 25.0%
! TGTATCATAGCAAAATCATA+AGG - tig0024251:68514-68533 None:intergenic 25.0%
! CAGAAGGAAAATAAATAGAA+TGG - tig0024251:68626-68645 None:intergenic 25.0%
! AGTTTATGGTAAATGTAAGA+AGG - tig0024251:68755-68774 None:intergenic 25.0%
!! TTTCAGGATAGTTTAGTTTA+TGG - tig0024251:68769-68788 None:intergenic 25.0%
! ATCCTGAAAAATTGAACTAT+TGG + tig0024251:68780-68799 Msa1415640:intron 25.0%
!! ATCCAATAGTTCAATTTTTC+AGG - tig0024251:68785-68804 None:intergenic 25.0%
! AAAATTGAACTATTGGATGA+AGG + tig0024251:68787-68806 Msa1415640:intron 25.0%
! AATATAAAACCCTTCTCATT+TGG + tig0024251:68961-68980 Msa1415640:intron 25.0%
! ATATAAAACCCTTCTCATTT+GGG + tig0024251:68962-68981 Msa1415640:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG + tig0024251:68986-69005 Msa1415640:intron 25.0%
! TAAAAAATTGTATTGGAGGA+GGG + tig0024251:68990-69009 Msa1415640:intron 25.0%
! AATAATTAAACTTCAGCACA+TGG - tig0024251:69434-69453 None:intergenic 25.0%
!! ATTATTTAGAACAATGACAG+TGG + tig0024251:69448-69467 Msa1415640:intron 25.0%
! AAGGCCATTAATATAGATTA+AGG + tig0024251:69534-69553 Msa1415640:intron 25.0%
!!! ATCTCAAAAATTTGAGTTGT+TGG + tig0024251:69710-69729 Msa1415640:intron 25.0%
!!! TCTCAAAAATTTGAGTTGTT+GGG + tig0024251:69711-69730 Msa1415640:intron 25.0%
!! TTGAACTTAAAAAAGCATAG+TGG + tig0024251:69812-69831 Msa1415640:intron 25.0%
!! AATGTTAGGTCAAACAATTT+TGG - tig0024251:69845-69864 None:intergenic 25.0%
!! TTTTTGCATGCGTAAATATT+TGG + tig0024251:70044-70063 Msa1415640:intron 25.0%
! ACTTTGGACTAAAATTTGAT+TGG + tig0024251:70106-70125 Msa1415640:intron 25.0%
! TGAAAAATCAAATGTGTGAA+TGG - tig0024251:70148-70167 None:intergenic 25.0%
! GGTCAATATAATTAAATGCA+AGG - tig0024251:70331-70350 None:intergenic 25.0%
! ATATATGTACAGAAACTAGA+AGG + tig0024251:70523-70542 Msa1415640:intron 25.0%
! GATTAAACCTATGAAAAAGT+TGG - tig0024251:70587-70606 None:intergenic 25.0%
! TTTCATAGGTTTAATCTTCA+TGG + tig0024251:70591-70610 Msa1415640:intron 25.0%
! TTCATAGGTTTAATCTTCAT+GGG + tig0024251:70592-70611 Msa1415640:intron 25.0%
! AACTATTAATCATGAAATGG+GGG - tig0024251:70627-70646 None:intergenic 25.0%
! CAACTATTAATCATGAAATG+GGG - tig0024251:70628-70647 None:intergenic 25.0%
! CACAACTATTAATCATGAAA+TGG - tig0024251:70630-70649 None:intergenic 25.0%
! CATTTAGAAAGATTTGATTC+GGG + tig0024251:70729-70748 Msa1415640:intron 25.0%
!! TAATGTCTTATTGTCAATAC+TGG - tig0024251:70924-70943 None:intergenic 25.0%
!!! AGTATTGACAATAAGACATT+AGG + tig0024251:70923-70942 Msa1415640:intron 25.0%
! TGTAAAAACATTAGTATGGA+TGG + tig0024251:71327-71346 Msa1415640:intron 25.0%
!!! GATTTGGATAAAGTCTTATT+TGG - tig0024251:71394-71413 None:intergenic 25.0%
!! TCACATATTTAGTTCAAAGA+TGG - tig0024251:71438-71457 None:intergenic 25.0%
! CTTTGAACTAAATATGTGAA+AGG + tig0024251:71439-71458 Msa1415640:intron 25.0%
! TGAAGATAATAGAGCAAAAA+GGG - tig0024251:71654-71673 None:intergenic 25.0%
! ATGAAGATAATAGAGCAAAA+AGG - tig0024251:71655-71674 None:intergenic 25.0%
! TTCTCCTTCTGATTATTATT+TGG + tig0024251:71798-71817 Msa1415640:intron 25.0%
!!! ATGGTAATATAAGGTTTTGT+TGG - tig0024251:71911-71930 None:intergenic 25.0%
! TTTCAATGAATGTGCTTTAT+GGG + tig0024251:71974-71993 Msa1415640:intron 25.0%
! GACAAATCTTAATGATCTTA+AGG + tig0024251:72068-72087 Msa1415640:CDS 25.0%
! TTCATTAGGTTTAATCTTCA+TGG + tig0024251:72225-72244 Msa1415640:intron 25.0%
! CACATTTATTAACCATGAAA+TGG - tig0024251:72272-72291 None:intergenic 25.0%
! TAAACTCATTTAGAAAGACA+AGG + tig0024251:72363-72382 Msa1415640:intron 25.0%
! ATACACAACTATCAATTATG+AGG - tig0024251:72538-72557 None:intergenic 25.0%
!!! AAAGTTTTGTATGGTTGATT+TGG + tig0024251:73387-73406 Msa1415640:three_prime_UTR 25.0%
!!! AAGTTTTGTATGGTTGATTT+GGG + tig0024251:73388-73407 Msa1415640:three_prime_UTR 25.0%
! TAAATGGAGATTATTCCAAT+CGG + tig0024251:73430-73449 Msa1415640:three_prime_UTR 25.0%
CAATTCAATCAAGTCTTTGA+AGG + tig0024251:67096-67115 Msa1415640:CDS 30.0%
CTGAGATTAATGAATTAGAG+AGG + tig0024251:67262-67281 Msa1415640:CDS 30.0%
TTGAAACAATGGAATAAGCA+AGG - tig0024251:67424-67443 None:intergenic 30.0%
CAAATATTCTAGACACTTGT+AGG - tig0024251:67661-67680 None:intergenic 30.0%
TGGTAAGACTATATGAGATA+AGG + tig0024251:67703-67722 Msa1415640:intron 30.0%
!! AGACATTGACTTCTTTAGTA+AGG + tig0024251:67821-67840 Msa1415640:intron 30.0%
! TAATGAGTTGGATCGAAATA+TGG + tig0024251:67935-67954 Msa1415640:intron 30.0%
GTTGGTTGTAATTAAAGAGA+TGG + tig0024251:68021-68040 Msa1415640:intron 30.0%
GTAATTAAAGAGATGGTACA+TGG + tig0024251:68028-68047 Msa1415640:intron 30.0%
ACAATATATTCCAGACAACT+AGG - tig0024251:68103-68122 None:intergenic 30.0%
! TTTTTCATTTATGCTTGTGC+AGG + tig0024251:68136-68155 Msa1415640:intron 30.0%
! AAGTGAAAAAGTTTTGCTAG+GGG + tig0024251:68241-68260 Msa1415640:intron 30.0%
ATCTATTCAACTACTCTTTC+TGG + tig0024251:68288-68307 Msa1415640:intron 30.0%
!! TATTTCCAAAAGAGCATTGT+AGG - tig0024251:68391-68410 None:intergenic 30.0%
ATTGAATTCGATCATTTCAC+AGG + tig0024251:68440-68459 Msa1415640:CDS 30.0%
ATCATTTCACAGGTATTCAT+CGG + tig0024251:68450-68469 Msa1415640:intron 30.0%
!!! GTGGTTTTATTACATCTCTT+AGG + tig0024251:68817-68836 Msa1415640:intron 30.0%
AAAGGCTTGGAAAAAAAGAA+AGG + tig0024251:68877-68896 Msa1415640:intron 30.0%
GAAAAAAAGAAAGGAGTAAG+TGG + tig0024251:68886-68905 Msa1415640:intron 30.0%
TATAAAACCCTTCTCATTTG+GGG + tig0024251:68963-68982 Msa1415640:intron 30.0%
GGGGAACTAAAAAATTGTAT+TGG + tig0024251:68983-69002 Msa1415640:intron 30.0%
CTAAAAAATTGTATTGGAGG+AGG + tig0024251:68989-69008 Msa1415640:intron 30.0%
GACAATGCATAAAATATGCA+AGG + tig0024251:69113-69132 Msa1415640:intron 30.0%
!! ATTTCTTTTGAGAAATGGAG+AGG - tig0024251:69513-69532 None:intergenic 30.0%
!! CCTTCATTTCTTTTGAGAAA+TGG - tig0024251:69518-69537 None:intergenic 30.0%
CCATTTCTCAAAAGAAATGA+AGG + tig0024251:69515-69534 Msa1415640:intron 30.0%
TACACCCAAAACTATAGTAA+TGG + tig0024251:69605-69624 Msa1415640:intron 30.0%
! GGTTCCATTACTATAGTTTT+GGG - tig0024251:69612-69631 None:intergenic 30.0%
TACTTCTCAAAAGATATGGA+GGG - tig0024251:69633-69652 None:intergenic 30.0%
TCTCTACTTCTCAAAAGATA+TGG - tig0024251:69637-69656 None:intergenic 30.0%
!! ATATCTTTTGAGAAGTAGAG+AGG + tig0024251:69636-69655 Msa1415640:intron 30.0%
! GCTAAAACTTGTTCAGAAAA+AGG - tig0024251:69902-69921 None:intergenic 30.0%
! TATAAAGCTTGTTCATTCCA+TGG + tig0024251:69986-70005 Msa1415640:CDS 30.0%
TTGTCAATACTGGAATTTCA+TGG - tig0024251:70282-70301 None:intergenic 30.0%
! TAATGTCTTGTTGTCAATAC+TGG - tig0024251:70292-70311 None:intergenic 30.0%
TAATTAAATGCAAGGGTCAA+GGG - tig0024251:70323-70342 None:intergenic 30.0%
ATAATTAAATGCAAGGGTCA+AGG - tig0024251:70324-70343 None:intergenic 30.0%
!!! GCATTAGATTTTTTGCTCTT+TGG + tig0024251:70559-70578 Msa1415640:intron 30.0%
TCATAGGTTTAATCTTCATG+GGG + tig0024251:70593-70612 Msa1415640:intron 30.0%
GATGAAGATGACAAACAAAA+GGG - tig0024251:70203-70222 None:intergenic 30.0%
!!! GATTTTTAAGAAGTACCACT+AGG + tig0024251:71068-71087 Msa1415640:intron 30.0%
GGCTTGTAAAAACATTAGTA+TGG + tig0024251:71323-71342 Msa1415640:intron 30.0%
CCACTTATGTCTTAATGATT+TGG - tig0024251:71410-71429 None:intergenic 30.0%
CCAAATCATTAAGACATAAG+TGG + tig0024251:71407-71426 Msa1415640:intron 30.0%
AGACAGATGACATATGAAAT+GGG - tig0024251:71558-71577 None:intergenic 30.0%
AATAGAGCAAAAAGGGTTTA+AGG - tig0024251:71647-71666 None:intergenic 30.0%
GCATTTAAGAATCCTAATCA+GGG + tig0024251:71737-71756 Msa1415640:intron 30.0%
CTTTCAATGAATGTGCTTTA+TGG + tig0024251:71973-71992 Msa1415640:intron 30.0%
TCGTAGTTTCTGTACATATA+TGG - tig0024251:72019-72038 None:intergenic 30.0%
ATATGTACAGAAACTACGAA+AGG + tig0024251:72020-72039 Msa1415640:intron 30.0%
!!! TTTGGTGCCAAATTTTCATT+AGG + tig0024251:72211-72230 Msa1415640:intron 30.0%
GTTTAATCTTCATGGATTCA+TGG + tig0024251:72233-72252 Msa1415640:intron 30.0%
TTTATTAACCATGAAATGGG+AGG - tig0024251:72268-72287 None:intergenic 30.0%
TATTAGATAAACGGAGATCA+TGG - tig0024251:72448-72467 None:intergenic 30.0%
TGATCTCCGTTTATCTAATA+AGG + tig0024251:72448-72467 Msa1415640:intron 30.0%
GTGACACCTTATTAGATAAA+CGG - tig0024251:72457-72476 None:intergenic 30.0%
AACTATCAATTATGAGGTGA+GGG - tig0024251:72532-72551 None:intergenic 30.0%
TCAAATAAGTCAATCCAAAC+AGG - tig0024251:72688-72707 None:intergenic 30.0%
AATATTTGCATCAGTCAAAG+CGG + tig0024251:73217-73236 Msa1415640:CDS 30.0%
!!! AGTTTTGTATGGTTGATTTG+GGG + tig0024251:73389-73408 Msa1415640:three_prime_UTR 30.0%
! TTACACAGTTTTCCTGTAAA+TGG + tig0024251:73414-73433 Msa1415640:three_prime_UTR 30.0%
TTGGAATAATCTCCATTTAC+AGG - tig0024251:73429-73448 None:intergenic 30.0%
AGAGCGTGAGTATCAATATT+TGG - tig0024251:66821-66840 None:intergenic 35.0%
AGAGAGAGAATCAATAAGGA+AGG + tig0024251:67046-67065 Msa1415640:CDS 35.0%
TCTTAGTTCAGGATCTTGAA+AGG + tig0024251:67187-67206 Msa1415640:intron 35.0%
AGGAAAATAGCAAATGACTG+TGG + tig0024251:67282-67301 Msa1415640:CDS 35.0%
AAGGATCATGAACTACTCAA+AGG - tig0024251:67405-67424 None:intergenic 35.0%
!!! AGTTTTTTCCCCTTTCTGTT+AGG + tig0024251:67456-67475 Msa1415640:intron 35.0%
TATTTGTATTCACGTTGCGT+TGG + tig0024251:67675-67694 Msa1415640:intron 35.0%
ACAACATTAGAGAGAGAGTT+GGG + tig0024251:67735-67754 Msa1415640:intron 35.0%
AGTCCCTATAGTAGAAAAGA+TGG + tig0024251:67760-67779 Msa1415640:intron 35.0%
! CCACCATCTTTTCTACTATA+GGG - tig0024251:67766-67785 None:intergenic 35.0%
! TCCACCATCTTTTCTACTAT+AGG - tig0024251:67767-67786 None:intergenic 35.0%
!! TAGAAAAGATGGTGGAAACT+AGG + tig0024251:67771-67790 Msa1415640:intron 35.0%
AGTCAAATTACTAGAGGTAG+AGG + tig0024251:67865-67884 Msa1415640:intron 35.0%
AAAGAGATGGTACATGGATA+AGG + tig0024251:68034-68053 Msa1415640:intron 35.0%
AAAGCAATGACATGCATAAC+AGG + tig0024251:68059-68078 Msa1415640:intron 35.0%
TAACAGGTTTGATGAGAATG+TGG + tig0024251:68075-68094 Msa1415640:intron 35.0%
! AGTGAAAAAGTTTTGCTAGG+GGG + tig0024251:68242-68261 Msa1415640:intron 35.0%
! TTCTACCTACAATGCTCTTT+TGG + tig0024251:68383-68402 Msa1415640:CDS 35.0%
GAGGGATACATTTGATATGA+GGG - tig0024251:68541-68560 None:intergenic 35.0%
AGAGGGATACATTTGATATG+AGG - tig0024251:68542-68561 None:intergenic 35.0%
CATATCAAATGTATCCCTCT+CGG + tig0024251:68542-68561 Msa1415640:intron 35.0%
ATAGAGCAAATAGAGAAGAG+AGG - tig0024251:68570-68589 None:intergenic 35.0%
TCTATTTGCTCTATCTGTTC+AGG + tig0024251:68576-68595 Msa1415640:intron 35.0%
CTATTTGCTCTATCTGTTCA+GGG + tig0024251:68577-68596 Msa1415640:intron 35.0%
TACTAAGAACAAGATGTGCT+AGG - tig0024251:68663-68682 None:intergenic 35.0%
AAGAAATAGAGGACATTGGA+AGG + tig0024251:68909-68928 Msa1415640:intron 35.0%
ATAAAACCCTTCTCATTTGG+GGG + tig0024251:68964-68983 Msa1415640:intron 35.0%
TGCATAAAATATGCAAGGTC+CGG + tig0024251:69118-69137 Msa1415640:intron 35.0%
!!! TTTTTTTTTTGTGGTGGCCA+GGG - tig0024251:69152-69171 None:intergenic 35.0%
!!! TTTTTTTTTTTGTGGTGGCC+AGG - tig0024251:69153-69172 None:intergenic 35.0%
!! GAAACCTTAAGGCTTTGTTT+GGG - tig0024251:69346-69365 None:intergenic 35.0%
!!! AGTATTTTGGGTTTGAAGCA+TGG + tig0024251:69385-69404 Msa1415640:intron 35.0%
! GGGTTCCATTACTATAGTTT+TGG - tig0024251:69613-69632 None:intergenic 35.0%
CTACTTCTCAAAAGATATGG+AGG - tig0024251:69634-69653 None:intergenic 35.0%
AAGGTAGGGAAAAACATTGA+AGG - tig0024251:69927-69946 None:intergenic 35.0%
CTTGAAACTGCAATAAGGTA+GGG - tig0024251:69941-69960 None:intergenic 35.0%
TCTTGAAACTGCAATAAGGT+AGG - tig0024251:69942-69961 None:intergenic 35.0%
TACCTTATTGCAGTTTCAAG+AGG + tig0024251:69941-69960 Msa1415640:intron 35.0%
!! GTGTTGTGTTGATTTGACTT+TGG + tig0024251:70090-70109 Msa1415640:intron 35.0%
TTAACAAAAAGAGAAGCAGG+AGG - tig0024251:70180-70199 None:intergenic 35.0%
GAGTTAACAAAAAGAGAAGC+AGG - tig0024251:70183-70202 None:intergenic 35.0%
GACCATCATACAGAATGATA+AGG + tig0024251:70360-70379 Msa1415640:intron 35.0%
CTCCTTATCATTCTGTATGA+TGG - tig0024251:70365-70384 None:intergenic 35.0%
CAGAATGATAAGGAGTTAGA+AGG + tig0024251:70370-70389 Msa1415640:intron 35.0%
AATGATAAGGAGTTAGAAGG+TGG + tig0024251:70373-70392 Msa1415640:intron 35.0%
!! GTGATTGAAAAGTACCACTA+AGG + tig0024251:70456-70475 Msa1415640:intron 35.0%
AAAAAATCCTGAAGCCTTAG+TGG - tig0024251:70473-70492 None:intergenic 35.0%
GCAGTAAGACATGTAATGTA+CGG - tig0024251:70500-70519 None:intergenic 35.0%
CAAAAAATCTAATGCCACCA+AGG - tig0024251:70554-70573 None:intergenic 35.0%
!!! TTTGGTGCCAACTTTTTCAT+AGG + tig0024251:70577-70596 Msa1415640:intron 35.0%
AATCATGAAATGGGGGAAAA+AGG - tig0024251:70620-70639 None:intergenic 35.0%
GTGTATCTTCTTTCTGTATG+AGG + tig0024251:70647-70666 Msa1415640:intron 35.0%
TGACAAACAAAAGGGACAAA+AGG - tig0024251:70807-70826 None:intergenic 35.0%
CGATGAAGATGACAAACAAA+AGG - tig0024251:70816-70835 None:intergenic 35.0%
!! TTATCAGTCTATGATGGACT+TGG - tig0024251:70977-70996 None:intergenic 35.0%
AAGTCCATCATAGACTGATA+AGG + tig0024251:70976-70995 Msa1415640:intron 35.0%
AACTCCTTATCAGTCTATGA+TGG - tig0024251:70983-71002 None:intergenic 35.0%
TAGACTGATAAGGAGTTAGA+AGG + tig0024251:70986-71005 Msa1415640:intron 35.0%
AAAATATTCCTGAAGCCTAG+TGG - tig0024251:71086-71105 None:intergenic 35.0%
TGTACAATGAGTGTAACATC+TGG - tig0024251:71226-71245 None:intergenic 35.0%
! TGAGAAAGTCTCGTTTTATG+TGG + tig0024251:71251-71270 Msa1415640:intron 35.0%
! AAGTCTCGTTTTATGTGGTT+TGG + tig0024251:71256-71275 Msa1415640:intron 35.0%
! AGTCTCGTTTTATGTGGTTT+GGG + tig0024251:71257-71276 Msa1415640:intron 35.0%
ATGTTTAGAGAAAGCCTGTA+TGG + tig0024251:71281-71300 Msa1415640:intron 35.0%
TAAACATGCACAAACCATAC+AGG - tig0024251:71298-71317 None:intergenic 35.0%
TAGTATGGATGGTTGATTAG+AGG + tig0024251:71338-71357 Msa1415640:intron 35.0%
! GATTTTATGGAGTCGATTGA+TGG + tig0024251:71461-71480 Msa1415640:intron 35.0%
CAGACAGATGACATATGAAA+TGG - tig0024251:71559-71578 None:intergenic 35.0%
TTCATATGTCATCTGTCTGT+TGG + tig0024251:71560-71579 Msa1415640:intron 35.0%
TCATATGTCATCTGTCTGTT+GGG + tig0024251:71561-71580 Msa1415640:intron 35.0%
!!! ACTGCTTCAACTTGTTTTGT+TGG + tig0024251:71715-71734 Msa1415640:intron 35.0%
GGCATTTAAGAATCCTAATC+AGG + tig0024251:71736-71755 Msa1415640:intron 35.0%
AAACTACGAAAGGTTCAACT+AGG + tig0024251:72030-72049 Msa1415640:CDS 35.0%
AACTACGAAAGGTTCAACTA+GGG + tig0024251:72031-72050 Msa1415640:CDS 35.0%
! TTCTCTGATGAAAGCTTTTC+AGG + tig0024251:72131-72150 Msa1415640:intron 35.0%
AAACTATTCTACCACCAAAG+CGG - tig0024251:72185-72204 None:intergenic 35.0%
ATATCAAACCTCTGCAAGAT+TGG - tig0024251:72494-72513 None:intergenic 35.0%
TTGCAGAGGTTTGATATTCA+TGG + tig0024251:72497-72516 Msa1415640:intron 35.0%
TGCAGAGGTTTGATATTCAT+GGG + tig0024251:72498-72517 Msa1415640:intron 35.0%
CAACTATCAATTATGAGGTG+AGG - tig0024251:72533-72552 None:intergenic 35.0%
TAAGCTCACTTAGAAAGACA+AGG + tig0024251:72633-72652 Msa1415640:intron 35.0%
TTAAATACTCTGGTCCTGTT+TGG + tig0024251:72671-72690 Msa1415640:intron 35.0%
AAACTATTTGGGAGAGCTTA+TGG + tig0024251:72735-72754 Msa1415640:intron 35.0%
! TTCCAGCTAAAGTGTCAATT+CGG - tig0024251:73011-73030 None:intergenic 35.0%
!! CTGCTTGTTGTCATTCTTAT+TGG + tig0024251:73062-73081 Msa1415640:intron 35.0%
AATAGCTTTCTTTAATGGCC+AGG + tig0024251:73116-73135 Msa1415640:intron 35.0%
! AGACGTCAGCAATTTTCATT+TGG - tig0024251:73178-73197 None:intergenic 35.0%
ATCTTGTTAACCCATAACCA+TGG - tig0024251:73270-73289 None:intergenic 35.0%
CAATTTGTCGAAGAGAGTGA+GGG - tig0024251:66793-66812 None:intergenic 40.0%
TCAATTTGTCGAAGAGAGTG+AGG - tig0024251:66794-66813 None:intergenic 40.0%
CTTAACACAACTTCGATGAG+TGG + tig0024251:66953-66972 Msa1415640:exon 40.0%
AACTTCGATGAGTGGCAATT+TGG + tig0024251:66961-66980 Msa1415640:exon 40.0%
! TGGTTTGTGAGATTGATTGC+CGG + tig0024251:66990-67009 Msa1415640:CDS 40.0%
AGGATATCCACTCTTAGTTC+AGG + tig0024251:67176-67195 Msa1415640:intron 40.0%
TCAAGATCCTGAACTAAGAG+TGG - tig0024251:67186-67205 None:intergenic 40.0%
AGTTCAGGATCTTGAAAGGA+AGG + tig0024251:67191-67210 Msa1415640:intron 40.0%
CATTCTCTTAGCGAATCACT+TGG + tig0024251:67327-67346 Msa1415640:CDS 40.0%
AGCAAGTTCCTAACAGAAAG+GGG - tig0024251:67467-67486 None:intergenic 40.0%
CAGCAAGTTCCTAACAGAAA+GGG - tig0024251:67468-67487 None:intergenic 40.0%
CTTACTGGACGATTTCTGAT+TGG - tig0024251:67543-67562 None:intergenic 40.0%
GACAACATTAGAGAGAGAGT+TGG + tig0024251:67734-67753 Msa1415640:intron 40.0%
CAACATTAGAGAGAGAGTTG+GGG + tig0024251:67736-67755 Msa1415640:intron 40.0%
CCCTATAGTAGAAAAGATGG+TGG + tig0024251:67763-67782 Msa1415640:intron 40.0%
AGTAAGGAGAGTAGATCAGA+TGG + tig0024251:67837-67856 Msa1415640:intron 40.0%
GAGGGTAGTCAAATTACTAG+AGG + tig0024251:67859-67878 Msa1415640:intron 40.0%
AGAACTGTATGCTCAAATCC+AGG + tig0024251:68176-68195 Msa1415640:CDS 40.0%
TTGGTATTTGCCACTGTACA+GGG + tig0024251:68333-68352 Msa1415640:intron 40.0%
ACAGGTATTCATCGGAGAAT+TGG + tig0024251:68458-68477 Msa1415640:intron 40.0%
GGAGAACAGATATGTACAGA+AGG - tig0024251:68642-68661 None:intergenic 40.0%
GGTAAATGTAAGAAGGCAAG+TGG - tig0024251:68748-68767 None:intergenic 40.0%
!! TTAGGCTTTGTTTGCGAGTT+TGG + tig0024251:68835-68854 Msa1415640:intron 40.0%
GGAGTAAGTGGAAGAAATAG+AGG + tig0024251:68898-68917 Msa1415640:intron 40.0%
GTGGAAGAAATAGAGGACAT+TGG + tig0024251:68905-68924 Msa1415640:intron 40.0%
AAATAGAGGACATTGGAAGG+AGG + tig0024251:68912-68931 Msa1415640:intron 40.0%
TTAGTTCCCCCAAATGAGAA+GGG - tig0024251:68973-68992 None:intergenic 40.0%
! TTTAGTTCCCCCAAATGAGA+AGG - tig0024251:68974-68993 None:intergenic 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG + tig0024251:68996-69015 Msa1415640:intron 40.0%
! TTGTATTGGAGGAGGGTTTT+GGG + tig0024251:68997-69016 Msa1415640:intron 40.0%
GCATAAAATATGCAAGGTCC+GGG + tig0024251:69119-69138 Msa1415640:intron 40.0%
CATAAAATATGCAAGGTCCG+GGG + tig0024251:69120-69139 Msa1415640:intron 40.0%
TTTGGGGGGAGAGAAATATA+GGG - tig0024251:69296-69315 None:intergenic 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG - tig0024251:69339-69358 None:intergenic 40.0%
AACTCCCAAACAAAGCCTTA+AGG + tig0024251:69339-69358 Msa1415640:intron 40.0%
!! GGAAACCTTAAGGCTTTGTT+TGG - tig0024251:69347-69366 None:intergenic 40.0%
GATCCACACTCGATTAATCA+AGG + tig0024251:69658-69677 Msa1415640:intron 40.0%
! AAGCTTGTTCATTCCATGGA+AGG + tig0024251:69990-70009 Msa1415640:CDS 40.0%
TTCCATGGAAGGAATTGTCA+AGG + tig0024251:70001-70020 Msa1415640:CDS 40.0%
TCCATGGAAGGAATTGTCAA+GGG + tig0024251:70002-70021 Msa1415640:CDS 40.0%
AATTGTCAAGGGAAGTGAAC+AGG + tig0024251:70013-70032 Msa1415640:CDS 40.0%
ATTTCATGGCGCTATAGAAG+TGG - tig0024251:70268-70287 None:intergenic 40.0%
TCATTCTGTATGATGGTCGA+TGG - tig0024251:70358-70377 None:intergenic 40.0%
!! AAAAGTACCACTAAGGCTTC+AGG + tig0024251:70463-70482 Msa1415640:intron 40.0%
AAAATCTAATGCCACCAAGG+CGG - tig0024251:70551-70570 None:intergenic 40.0%
!! GCTGAGATAAGAGTGTTATG+TGG + tig0024251:71157-71176 Msa1415640:intron 40.0%
!! AAGAGTGTTATGTGGATGAG+TGG + tig0024251:71165-71184 Msa1415640:intron 40.0%
GGTTTGTGCATGTTTAGAGA+AGG + tig0024251:71302-71321 Msa1415640:intron 40.0%
TATGGATGGTTGATTAGAGG+CGG + tig0024251:71341-71360 Msa1415640:intron 40.0%
CGGGAAAGATCAATTGTTAG+AGG + tig0024251:71361-71380 Msa1415640:intron 40.0%
TGACATATGAAATGGGTGCA+TGG - tig0024251:71551-71570 None:intergenic 40.0%
GTTACTACTACTGTTGCTGT+TGG - tig0024251:71625-71644 None:intergenic 40.0%
TAAGAATCCTAATCAGGGAC+TGG + tig0024251:71742-71761 Msa1415640:intron 40.0%
TTCTAATCCAGTCCCTGATT+AGG - tig0024251:71752-71771 None:intergenic 40.0%
TTATTATATCGTCGCCGCTT+TGG + tig0024251:72168-72187 Msa1415640:intron 40.0%
AACCATGAAATGGGAGGAAA+AGG - tig0024251:72262-72281 None:intergenic 40.0%
GCAGAGGTTTGATATTCATG+GGG + tig0024251:72499-72518 Msa1415640:intron 40.0%
CAATTATGAGGTGAGGGAAA+AGG - tig0024251:72526-72545 None:intergenic 40.0%
! TCTGGTGTTGAAGCACTATT+TGG - tig0024251:72930-72949 None:intergenic 40.0%
TTCCGAATTGACACTTTAGC+TGG + tig0024251:73006-73025 Msa1415640:intron 40.0%
AATGCTCCAAGGAGAAGTTA+CGG + tig0024251:73142-73161 Msa1415640:CDS 40.0%
AGCTCACAATACCATGGTTA+TGG + tig0024251:73256-73275 Msa1415640:three_prime_UTR 40.0%
GCTCACAATACCATGGTTAT+GGG + tig0024251:73257-73276 Msa1415640:three_prime_UTR 40.0%
TTATAAACTGATGCGAGCTG+CGG + tig0024251:73300-73319 Msa1415640:three_prime_UTR 40.0%
AGATTATTCCAATCGGCCAA+AGG + tig0024251:73437-73456 Msa1415640:three_prime_UTR 40.0%
GATTTCGAGCGTAGGTAACA+GGG - tig0024251:66847-66866 None:intergenic 45.0%
TGATTTCGAGCGTAGGTAAC+AGG - tig0024251:66848-66867 None:intergenic 45.0%
!! CTTGTGTTGATTTCGAGCGT+AGG - tig0024251:66855-66874 None:intergenic 45.0%
GAGTGGCAATTTGGATGAAC+TGG + tig0024251:66970-66989 Msa1415640:CDS 45.0%
TTGCCGGAAGATGAATGTTG+TGG + tig0024251:67006-67025 Msa1415640:CDS 45.0%
GCTCCACAACATTCATCTTC+CGG - tig0024251:67012-67031 None:intergenic 45.0%
GCAGCAAGTTCCTAACAGAA+AGG - tig0024251:67469-67488 None:intergenic 45.0%
!! AGGAACTTGCTGCTAGACTA+AGG + tig0024251:67476-67495 Msa1415640:intron 45.0%
!! GGAACTTGCTGCTAGACTAA+GGG + tig0024251:67477-67496 Msa1415640:intron 45.0%
TGGACGATTTCTGATTGGCA+CGG - tig0024251:67538-67557 None:intergenic 45.0%
TTCACGTTGCGTTGGATATG+TGG + tig0024251:67683-67702 Msa1415640:intron 45.0%
!! AGATGGTGGAAACTAGGCTT+AGG + tig0024251:67777-67796 Msa1415640:intron 45.0%
AAGGAGAGTAGATCAGATGG+AGG + tig0024251:67840-67859 Msa1415640:intron 45.0%
AGGAGAGTAGATCAGATGGA+GGG + tig0024251:67841-67860 Msa1415640:intron 45.0%
AACTCTTACCCCACTATGTG+GGG - tig0024251:68004-68023 None:intergenic 45.0%
CAACTCTTACCCCACTATGT+GGG - tig0024251:68005-68024 None:intergenic 45.0%
GAATGTGGAACCTAGTTGTC+TGG + tig0024251:68090-68109 Msa1415640:intron 45.0%
CTGTACAGTGGCAAATACCA+AGG - tig0024251:68334-68353 None:intergenic 45.0%
CTTGGTATTTGCCACTGTAC+AGG + tig0024251:68332-68351 Msa1415640:intron 45.0%
! TCGATGTTTTCCCTGTACAG+TGG - tig0024251:68346-68365 None:intergenic 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG + tig0024251:68839-68858 Msa1415640:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG + tig0024251:68840-68859 Msa1415640:intron 45.0%
ACATTGGAAGGAGGAGCTTT+GGG + tig0024251:68921-68940 Msa1415640:intron 45.0%
! TGTATTGGAGGAGGGTTTTG+GGG + tig0024251:68998-69017 Msa1415640:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG + tig0024251:69091-69110 Msa1415640:intron 45.0%
TTGGGGGGAGAGAAATATAG+GGG - tig0024251:69295-69314 None:intergenic 45.0%
! CTTTGGGGGGAGAGAAATAT+AGG - tig0024251:69297-69316 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - tig0024251:69334-69353 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - tig0024251:69335-69354 None:intergenic 45.0%
AGGGAAAGTGGGAAACCTTA+AGG - tig0024251:69357-69376 None:intergenic 45.0%
!!! TCCCTCATGCGAGAGTATTT+TGG + tig0024251:69372-69391 Msa1415640:intron 45.0%
CCCAAAATACTCTCGCATGA+GGG - tig0024251:69376-69395 None:intergenic 45.0%
!!! CCCTCATGCGAGAGTATTTT+GGG + tig0024251:69373-69392 Msa1415640:intron 45.0%
ACCCAAAATACTCTCGCATG+AGG - tig0024251:69377-69396 None:intergenic 45.0%
AGTGGCGAACATAGAATTCC+TGG + tig0024251:69466-69485 Msa1415640:intron 45.0%
AATTCCTGGCCAACTGATCA+GGG + tig0024251:69480-69499 Msa1415640:intron 45.0%
CCTCCTTGATTAATCGAGTG+TGG - tig0024251:69664-69683 None:intergenic 45.0%
CCACACTCGATTAATCAAGG+AGG + tig0024251:69661-69680 Msa1415640:intron 45.0%
AGTTGTTGGGTGAAGAGACT+TGG + tig0024251:69724-69743 Msa1415640:intron 45.0%
GTTGTTGGGTGAAGAGACTT+GGG + tig0024251:69725-69744 Msa1415640:intron 45.0%
GGCCTCTTGAAACTGCAATA+AGG - tig0024251:69946-69965 None:intergenic 45.0%
! ACGACCATCAGTGCTACTAA+AGG - tig0024251:69967-69986 None:intergenic 45.0%
TCCCTTGACAATTCCTTCCA+TGG - tig0024251:70006-70025 None:intergenic 45.0%
AGAGTTAACTGCAGCTCTTG+AGG + tig0024251:70068-70087 Msa1415640:intron 45.0%
! GCGGCGTTTTACACATTTTG+CGG - tig0024251:70240-70259 None:intergenic 45.0%
GCAAAATGTGTAAAACGCCG+CGG + tig0024251:70239-70258 Msa1415640:intron 45.0%
! TGTATGATGGTCGATGGACT+TGG - tig0024251:70352-70371 None:intergenic 45.0%
CAAAAGGAGAAGCAAGAGGA+AGG - tig0024251:70791-70810 None:intergenic 45.0%
! CCTATATGTGGGTTAACGAG+CGG - tig0024251:70871-70890 None:intergenic 45.0%
ATTTCGCAGAGCTATAGCAG+CGG - tig0024251:70900-70919 None:intergenic 45.0%
!! AAGAAGTACCACTAGGCTTC+AGG + tig0024251:71075-71094 Msa1415640:intron 45.0%
ATGGATGGTTGATTAGAGGC+GGG + tig0024251:71342-71361 Msa1415640:intron 45.0%
! TACTGTTGCTGTTGGCAAAG+GGG - tig0024251:71617-71636 None:intergenic 45.0%
! CTACTGTTGCTGTTGGCAAA+GGG - tig0024251:71618-71637 None:intergenic 45.0%
! ACTACTGTTGCTGTTGGCAA+AGG - tig0024251:71619-71638 None:intergenic 45.0%
GCGGCGACGATATAATAAAC+TGG - tig0024251:72166-72185 None:intergenic 45.0%
! GACCTTTTCCTCCCATTTCA+TGG + tig0024251:72257-72276 Msa1415640:intron 45.0%
AGCAAGCCGTGTATCTGATA+TGG + tig0024251:72958-72977 Msa1415640:intron 45.0%
CCGATGCCATATCAGATACA+CGG - tig0024251:72967-72986 None:intergenic 45.0%
CCGTGTATCTGATATGGCAT+CGG + tig0024251:72964-72983 Msa1415640:intron 45.0%
!! TCTCCTTGGAGCATTTTTCC+TGG - tig0024251:73137-73156 None:intergenic 45.0%
TTGACACCGTAACTTCTCCT+TGG - tig0024251:73151-73170 None:intergenic 45.0%
GAAAATTGCTGACGTCTCTG+AGG + tig0024251:73181-73200 Msa1415640:CDS 45.0%
GTCACAAGCTCACAATACCA+TGG + tig0024251:73250-73269 Msa1415640:three_prime_UTR 45.0%
ATTCCAATCGGCCAAAGGAT+TGG + tig0024251:73442-73461 Msa1415640:three_prime_UTR 45.0%
TTCCAATCGGCCAAAGGATT+GGG + tig0024251:73443-73462 Msa1415640:three_prime_UTR 45.0%
CGATTTCTGATTGGCACGGT+AGG - tig0024251:67534-67553 None:intergenic 50.0%
TGGTGGAAACTAGGCTTAGG+CGG + tig0024251:67780-67799 Msa1415640:intron 50.0%
ACTATGTGGGGTCAGCTACA+TGG - tig0024251:67992-68011 None:intergenic 50.0%
ATGTAGCTGACCCCACATAG+TGG + tig0024251:67991-68010 Msa1415640:intron 50.0%
TGTAGCTGACCCCACATAGT+GGG + tig0024251:67992-68011 Msa1415640:intron 50.0%
CCAACTCTTACCCCACTATG+TGG - tig0024251:68006-68025 None:intergenic 50.0%
! CCACATAGTGGGGTAAGAGT+TGG + tig0024251:68003-68022 Msa1415640:intron 50.0%
GCTTGTGCAGGTATGAACAC+CGG + tig0024251:68148-68167 Msa1415640:intron 50.0%
!! GAGCATACAGTTCTGAGAGC+CGG - tig0024251:68170-68189 None:intergenic 50.0%
! ATTGGATGAAGGCACGTGAG+TGG + tig0024251:68798-68817 Msa1415640:intron 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG + tig0024251:68838-68857 Msa1415640:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG + tig0024251:68845-68864 Msa1415640:intron 50.0%
GACATTGGAAGGAGGAGCTT+TGG + tig0024251:68920-68939 Msa1415640:intron 50.0%
CATTGGAAGGAGGAGCTTTG+GGG + tig0024251:68922-68941 Msa1415640:intron 50.0%
!! GTATTGGAGGAGGGTTTTGG+GGG + tig0024251:68999-69018 Msa1415640:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - tig0024251:69336-69355 None:intergenic 50.0%
ACTCTCGCATGAGGGAAAGT+GGG - tig0024251:69368-69387 None:intergenic 50.0%
TACTCTCGCATGAGGGAAAG+TGG - tig0024251:69369-69388 None:intergenic 50.0%
GAATTCCTGGCCAACTGATC+AGG + tig0024251:69479-69498 Msa1415640:intron 50.0%
! GAGGCCTTTAGTAGCACTGA+TGG + tig0024251:69960-69979 Msa1415640:CDS 50.0%
GGGACAAAAGGAGAAGCAAG+AGG - tig0024251:70795-70814 None:intergenic 50.0%
! GCGGAGTTTCGCGTATTTTG+AGG - tig0024251:70852-70871 None:intergenic 50.0%
CCGCTCGTTAACCCACATAT+AGG + tig0024251:70868-70887 Msa1415640:intron 50.0%
AGCGGTAGCTGCCTATATGT+GGG - tig0024251:70882-70901 None:intergenic 50.0%
! GAGTCGATTGATGGCTGACT+TGG + tig0024251:71470-71489 Msa1415640:intron 50.0%
!! TCGATTGATGGCTGACTTGG+TGG + tig0024251:71473-71492 Msa1415640:intron 50.0%
GATAGATATGCCGCAGCAGT+CGG + tig0024251:72090-72109 Msa1415640:CDS 50.0%
! TTATATCGTCGCCGCTTTGG+TGG + tig0024251:72171-72190 Msa1415640:intron 50.0%
TGGCCAGGAAAAATGCTCCA+AGG + tig0024251:73131-73150 Msa1415640:intron 50.0%
CAGTCAAAGCGGATCGATGA+TGG + tig0024251:73228-73247 Msa1415640:CDS 50.0%
TCCAATCGGCCAAAGGATTG+GGG + tig0024251:73444-73463 Msa1415640:three_prime_UTR 50.0%
! ATTGGAGTGCCCCAATCCTT+TGG - tig0024251:73456-73475 None:intergenic 50.0%
GTAGCTGACCCCACATAGTG+GGG + tig0024251:67993-68012 Msa1415640:intron 55.0%
!! AGAGAAGAGAGGCACCGAGA+GGG - tig0024251:68559-68578 None:intergenic 55.0%
!! TAGAGAAGAGAGGCACCGAG+AGG - tig0024251:68560-68579 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG + tig0024251:68844-68863 Msa1415640:intron 55.0%
GAGTTTGGAGGGGAAGGGAA+GGG + tig0024251:68850-68869 Msa1415640:intron 55.0%
AGGGAAGGGAAGGAAAGGCT+TGG + tig0024251:68864-68883 Msa1415640:intron 55.0%
!!! GAGGAGGGTTTTGGGGGTTT+GGG + tig0024251:69005-69024 Msa1415640:intron 55.0%
!!! AGGGTTTTGGGGGTTTGGGA+GGG + tig0024251:69009-69028 Msa1415640:intron 55.0%
CCAACTGAGCTAAGCTCACG+AGG - tig0024251:69089-69108 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + tig0024251:69086-69105 Msa1415640:intron 55.0%
! AGGGGAAGGAAAGGCTTTGG+GGG - tig0024251:69311-69330 None:intergenic 55.0%
GAGGGGAAGGAAAGGCTTTG+GGG - tig0024251:69312-69331 None:intergenic 55.0%
GGAGGGGAAGGAAAGGCTTT+GGG - tig0024251:69313-69332 None:intergenic 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG - tig0024251:69329-69348 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - tig0024251:69330-69349 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - tig0024251:69331-69350 None:intergenic 55.0%
CTGGCCAACTGATCAGGGTA+GGG + tig0024251:69485-69504 Msa1415640:intron 55.0%
GGATCCCTACCCTGATCAGT+TGG - tig0024251:69492-69511 None:intergenic 55.0%
CGCTATAGAAGTGGTAGCCG+CGG - tig0024251:70259-70278 None:intergenic 55.0%
CAGCGGTAGCTGCCTATATG+TGG - tig0024251:70883-70902 None:intergenic 55.0%
GGGTGCATGGCTGAATGCTA+TGG - tig0024251:71538-71557 None:intergenic 55.0%
! CTTATGCTCACCGACTGCTG+CGG - tig0024251:72103-72122 None:intergenic 55.0%
GCACAGTGCCAATCTTGCAG+AGG + tig0024251:72483-72502 Msa1415640:intron 55.0%
!! ACGGCTTGCTGTAGATCGTC+TGG - tig0024251:72948-72967 None:intergenic 55.0%
CGAGTTTGGAGGGGAAGGGA+AGG + tig0024251:68849-68868 Msa1415640:intron 60.0%
TTGGAGGGGAAGGGAAGGGA+AGG + tig0024251:68854-68873 Msa1415640:intron 60.0%
GGGGAAGGGAAGGGAAGGAA+AGG + tig0024251:68859-68878 Msa1415640:intron 60.0%
!!! GGAGGAGGGTTTTGGGGGTT+TGG + tig0024251:69004-69023 Msa1415640:intron 60.0%
!!! GAGGGTTTTGGGGGTTTGGG+AGG + tig0024251:69008-69027 Msa1415640:intron 60.0%
AAGGTCCGGGGTTCAAACCC+TGG + tig0024251:69132-69151 Msa1415640:intron 60.0%
!! GGGGAAGGAAAGGCTTTGGG+GGG - tig0024251:69310-69329 None:intergenic 60.0%
GGGAGGGGAAGGAAAGGCTT+TGG - tig0024251:69314-69333 None:intergenic 60.0%
TTGGAGGGGAGGGGAAGGAA+AGG - tig0024251:69320-69339 None:intergenic 60.0%
CCTACCCTGATCAGTTGGCC+AGG - tig0024251:69487-69506 None:intergenic 60.0%
CCTGGCCAACTGATCAGGGT+AGG + tig0024251:69484-69503 Msa1415640:intron 60.0%
!! GAAACTAGAAGGCGCCGCCT+TGG + tig0024251:70534-70553 Msa1415640:intron 60.0%
GCCCCAATCCTTTGGCCGAT+TGG - tig0024251:73448-73467 None:intergenic 60.0%
GGTGGCCAGGGTTTGAACCC+CGG - tig0024251:69140-69159 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+AGG - tig0024251:69325-69344 None:intergenic 65.0%
!! ACTAGAAGGCGCCGCCTTGG+TGG + tig0024251:70537-70556 Msa1415640:intron 65.0%
Chromosome Type Strat End Strand Name
tig0024251 gene 66775 73580 66775 ID=Msa1415640;Name=Msa1415640
tig0024251 mRNA 66775 73580 66775 ID=Msa1415640-mRNA-1;Parent=Msa1415640;Name=Msa1415640-mRNA-1;_AED=0.06;_eAED=0.06;_QI=154|0.87|0.88|1|0.87|0.77|9|333|274
tig0024251 exon 66775 66796 66775 ID=Msa1415640-mRNA-1:exon:22486;Parent=Msa1415640-mRNA-1
tig0024251 exon 66836 67117 66836 ID=Msa1415640-mRNA-1:exon:22487;Parent=Msa1415640-mRNA-1
tig0024251 exon 67198 67371 67198 ID=Msa1415640-mRNA-1:exon:22488;Parent=Msa1415640-mRNA-1
tig0024251 exon 67478 67557 67478 ID=Msa1415640-mRNA-1:exon:22489;Parent=Msa1415640-mRNA-1
tig0024251 exon 68158 68197 68158 ID=Msa1415640-mRNA-1:exon:22490;Parent=Msa1415640-mRNA-1
tig0024251 exon 68354 68461 68354 ID=Msa1415640-mRNA-1:exon:22491;Parent=Msa1415640-mRNA-1
tig0024251 exon 69954 70034 69954 ID=Msa1415640-mRNA-1:exon:22492;Parent=Msa1415640-mRNA-1
tig0024251 exon 72030 72111 72030 ID=Msa1415640-mRNA-1:exon:22493;Parent=Msa1415640-mRNA-1
tig0024251 exon 73138 73580 73138 ID=Msa1415640-mRNA-1:exon:22494;Parent=Msa1415640-mRNA-1
tig0024251 five_prime_UTR 66775 66796 66775 ID=Msa1415640-mRNA-1:five_prime_utr;Parent=Msa1415640-mRNA-1
tig0024251 five_prime_UTR 66836 66967 66836 ID=Msa1415640-mRNA-1:five_prime_utr;Parent=Msa1415640-mRNA-1
tig0024251 CDS 66968 67117 66968 ID=Msa1415640-mRNA-1:cds;Parent=Msa1415640-mRNA-1
tig0024251 CDS 67198 67371 67198 ID=Msa1415640-mRNA-1:cds;Parent=Msa1415640-mRNA-1
tig0024251 CDS 67478 67557 67478 ID=Msa1415640-mRNA-1:cds;Parent=Msa1415640-mRNA-1
tig0024251 CDS 68158 68197 68158 ID=Msa1415640-mRNA-1:cds;Parent=Msa1415640-mRNA-1
tig0024251 CDS 68354 68461 68354 ID=Msa1415640-mRNA-1:cds;Parent=Msa1415640-mRNA-1
tig0024251 CDS 69954 70034 69954 ID=Msa1415640-mRNA-1:cds;Parent=Msa1415640-mRNA-1
tig0024251 CDS 72030 72111 72030 ID=Msa1415640-mRNA-1:cds;Parent=Msa1415640-mRNA-1
tig0024251 CDS 73138 73247 73138 ID=Msa1415640-mRNA-1:cds;Parent=Msa1415640-mRNA-1
tig0024251 three_prime_UTR 73248 73580 73248 ID=Msa1415640-mRNA-1:three_prime_utr;Parent=Msa1415640-mRNA-1
Gene Sequence

>Msa1415640

ATGAGTGGCAATTTGGATGAACTGGTTTGTGAGATTGATTGCCGGAAGATGAATGTTGTGGAGCAGTTAGATGAATTAAGAGAGAGAATCAATAAGGAAGGTGTTGATTCTTCTGTGCACAAGTTGTACAATTCAATCAAGTCTTTGAAGGATCTTGAAAGGAAGGAAAATCAGTTTCTGTTCAAACGCGATTCTAAGCATTCAGAACTTCAATCTGAGATTAATGAATTAGAGAGGAAAATAGCAAATGACTGTGGTGATGATAGCAAGAGTCTTCATCATTCTCTTAGCGAATCACTTGGAAGAGTTGATTTGATGAAAAAGGAACTTGCTGCTAGACTAAGGGATGTAGTAGCAGTAAGACGACAAATTGATGACCTACCGTGCCAATCAGAAATCGTCCAGTATGAACACCGGCTCTCAGAACTGTATGCTCAAATCCAGGGAAAACATCGACAGACTCGCAAATACTATTCTACCTACAATGCTCTTTTGGAAATAAAAGAATTGATGTTAAAGGAAACATCTTTATTGAATTCGATCATTTCACAGTTTCAAGAGGCCTTTAGTAGCACTGATGGTCGTATAAAGCTTGTTCATTCCATGGAAGGAATTGTCAAGGGAAGTGAACAGAAACTACGAAAGGTTCAACTAGGGCTTCAAGAAGAAGAGACAAATCTTAATGATCTTAAGGATAGATATGCCGCAGCAGTCGGAAAAATGCTCCAAGGAGAAGTTACGGTGTCAAAGTTCCAAATGAAAATTGCTGACGTCTCTGAGGTTGTGTTGCATGAAATATTTGCATCAGTCAAAGCGGATCGATGA

Protein sequence

>Msa1415640

MSGNLDELVCEIDCRKMNVVEQLDELRERINKEGVDSSVHKLYNSIKSLKDLERKENQFLFKRDSKHSELQSEINELERKIANDCGDDSKSLHHSLSESLGRVDLMKKELAARLRDVVAVRRQIDDLPCQSEIVQYEHRLSELYAQIQGKHRQTRKYYSTYNALLEIKELMLKETSLLNSIISQFQEAFSSTDGRIKLVHSMEGIVKGSEQKLRKVQLGLQEEETNLNDLKDRYAAAVGKMLQGEVTVSKFQMKIADVSEVVLHEIFASVKADR*