AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0419820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419820 MtrunA17_Chr3g0118421 71.978 182 28 2 1 159 81 262 1.12e-83 246
Msa0419820 MtrunA17_Chr1g0170691 43.636 165 56 2 1 129 89 252 8.51e-33 118
Msa0419820 MtrunA17_Chr3g0128941 30.137 146 65 4 2 122 76 209 1.33e-13 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419820 AT5G23310.1 58.242 182 53 2 1 159 82 263 2.63e-68 208
Msa0419820 AT5G51100.2 41.818 165 58 3 1 129 17 179 7.35e-38 129
Msa0419820 AT5G51100.6 41.818 165 58 3 1 129 17 179 7.35e-38 129
Msa0419820 AT5G51100.1 41.818 165 58 3 1 129 85 247 3.40e-37 129
Msa0419820 AT5G51100.5 43.590 156 59 5 1 129 85 238 5.52e-34 121
Msa0419820 AT5G51100.4 56.436 101 41 2 1 100 85 183 1.92e-32 115
Msa0419820 AT5G51100.3 56.436 101 41 2 1 100 85 183 1.92e-32 115
Msa0419820 AT4G25100.3 42.177 147 64 3 1 128 43 187 9.61e-30 108
Msa0419820 AT4G25100.5 42.177 147 64 3 1 128 43 187 9.61e-30 108
Msa0419820 AT4G25100.1 42.177 147 64 3 1 128 43 187 9.61e-30 108
Msa0419820 AT4G25100.2 42.177 147 64 3 1 128 43 187 9.61e-30 108
Msa0419820 AT4G25100.4 42.177 147 64 3 1 128 17 161 9.87e-30 107
Msa0419820 AT3G10920.1 33.036 112 49 3 36 122 94 204 9.96e-13 63.9
Msa0419820 AT3G56350.1 33.051 118 53 4 36 128 99 215 3.54e-11 59.7

Find 75 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGATCCACTCCTTCCTTTC+TGG 0.052374 3_2:+68002207 None:intergenic
CAACAGATTGAAAAGGATTT+TGG 0.090800 3_2:-68003379 Msa0419820:CDS
GCGTCCCATGTGCTTCTTTC+TGG 0.097898 3_2:-68002159 Msa0419820:three_prime_UTR
GGGAAGGATGATATACTTTA+TGG 0.140754 3_2:-68004203 Msa0419820:CDS
CACAAATCCAAATTGATTAT+TGG 0.182071 3_2:+68002688 None:intergenic
TCGTGCGCCAATAATCAATT+TGG 0.229447 3_2:-68002695 Msa0419820:CDS
TTTGGAATCATGACTTCTTC+TGG 0.232976 3_2:-68003450 Msa0419820:CDS
TATGAACAAGGCATCTTAAA+TGG 0.246552 3_2:-68002284 Msa0419820:three_prime_UTR
GGGATGTAGTGAACTTAGTA+TGG 0.265185 3_2:-68002084 Msa0419820:three_prime_UTR
GCACTTACATTGTTTGGTTC+TGG 0.289790 3_2:-68003319 Msa0419820:CDS
GAAGCTGCACTTACATTGTT+TGG 0.294047 3_2:-68003325 Msa0419820:CDS
TCAAAGGCTTCACATGTCAT+AGG 0.312294 3_2:-68002247 Msa0419820:three_prime_UTR
TTACATTGTTTGGTTCTGGC+TGG 0.329309 3_2:-68003315 Msa0419820:CDS
TCCTTAAGGATTTATCAGTA+TGG 0.332324 3_2:-68001964 Msa0419820:three_prime_UTR
GGAGGTGATAGGCCCATTCT+AGG 0.369142 3_2:-68003409 Msa0419820:CDS
ACTGAGGAAAATCTGCAAAA+TGG 0.375899 3_2:-68002108 Msa0419820:three_prime_UTR
TGTTTGGTTCTGGCTGGGTT+TGG 0.376067 3_2:-68003309 Msa0419820:CDS
TTGGAATCATGACTTCTTCT+GGG 0.399356 3_2:-68003449 Msa0419820:CDS
AATGCAGCATGCATACTATC+TGG 0.401361 3_2:-68002550 Msa0419820:intron
AAATCCTTAAGGAGAAGTTT+AGG 0.403849 3_2:+68001974 None:intergenic
TTCTGAACCACCTTGTGTCT+TGG 0.411846 3_2:-68002411 Msa0419820:CDS
TCCACTCCTTCCTTTCTGGC+TGG 0.414148 3_2:+68002211 None:intergenic
CTTCTGGGAATCCATGCAAC+CGG 0.415502 3_2:-68003434 Msa0419820:CDS
AATAATCAATTTGGATTTGT+GGG 0.416308 3_2:-68002686 Msa0419820:CDS
CAATAATCAATTTGGATTTG+TGG 0.430790 3_2:-68002687 Msa0419820:CDS
TACATTGTTTGGTTCTGGCT+GGG 0.439690 3_2:-68003314 Msa0419820:CDS
CAAGGCATCTTAAATGGAGT+TGG 0.440705 3_2:-68002278 Msa0419820:three_prime_UTR
GCTGCCTAAACTTCTCCTTA+AGG 0.445159 3_2:-68001978 Msa0419820:three_prime_UTR
GGAGTTGGTTTGAAATTCAA+AGG 0.467292 3_2:-68002263 Msa0419820:three_prime_UTR
AAGGTTTGAACGAACAGCTT+GGG 0.470005 3_2:-68004223 Msa0419820:CDS
TCCATACTGATAAATCCTTA+AGG 0.475628 3_2:+68001963 None:intergenic
ATCACCTCCTCCCGGTTGCA+TGG 0.477767 3_2:+68003423 None:intergenic
GCACATCTACGTGGCAATCC+AGG 0.491071 3_2:+68001898 None:intergenic
CTGTTGAAGGAGACCTAGAA+TGG 0.492826 3_2:+68003396 None:intergenic
TGCAACCGGGAGGAGGTGAT+AGG 0.497633 3_2:-68003420 Msa0419820:CDS
TCTCCTTCAACAGATTGAAA+AGG 0.504146 3_2:-68003386 Msa0419820:CDS
CAAAGGCTTCACATGTCATA+GGG 0.515600 3_2:-68002246 Msa0419820:three_prime_UTR
GAAGGTTTGAACGAACAGCT+TGG 0.524067 3_2:-68004224 Msa0419820:CDS
CTGCAACGGAACGCTTGACA+TGG 0.542471 3_2:-68002384 Msa0419820:CDS
TATACTTTATGGTTACACCT+TGG 0.547554 3_2:-68004192 Msa0419820:CDS
CACTTTGACTAGTTCATCCA+AGG 0.548426 3_2:+68004175 None:intergenic
TTCTGGGAATCCATGCAACC+GGG 0.558653 3_2:-68003433 Msa0419820:CDS
GAATCCATGCAACCGGGAGG+AGG 0.560022 3_2:-68003427 Msa0419820:CDS
GGCTTCACATGTCATAGGGT+TGG 0.560208 3_2:-68002242 Msa0419820:three_prime_UTR
GGATGTAGTGAACTTAGTAT+GGG 0.562995 3_2:-68002083 Msa0419820:three_prime_UTR
GCCAGCCAGAAAGGAAGGAG+TGG 0.563875 3_2:-68002212 Msa0419820:three_prime_UTR
GGTCGTACAGCCAGCCAGAA+AGG 0.565896 3_2:-68002221 Msa0419820:three_prime_UTR
TGCATACTATCTGGATTACA+AGG 0.567151 3_2:-68002541 Msa0419820:intron
GTACAGCCAGCCAGAAAGGA+AGG 0.569051 3_2:-68002217 Msa0419820:three_prime_UTR
TGTTGAAGGAGACCTAGAAT+GGG 0.585469 3_2:+68003397 None:intergenic
AGGAAAATCTGCAAAATGGA+GGG 0.588466 3_2:-68002104 Msa0419820:three_prime_UTR
TCAGCTGCATTGTTGAACTC+AGG 0.595903 3_2:+68004128 None:intergenic
GAGGAAAATCTGCAAAATGG+AGG 0.597242 3_2:-68002105 Msa0419820:three_prime_UTR
TTAAGGAGAAGTTTAGGCAG+CGG 0.597707 3_2:+68001980 None:intergenic
GCATTGTTGAACTCAGGTGA+GGG 0.599120 3_2:+68004134 None:intergenic
TGCATTGTTGAACTCAGGTG+AGG 0.604713 3_2:+68004133 None:intergenic
TGAGTTCAACAATGCAGCTG+AGG 0.616915 3_2:-68004126 Msa0419820:intron
AATCAATTTGGATTTGTGGG+AGG 0.617816 3_2:-68002683 Msa0419820:intron
ATGGGCCTATCACCTCCTCC+CGG 0.618331 3_2:+68003415 None:intergenic
TTTGAACGAACAGCTTGGGA+AGG 0.619243 3_2:-68004219 Msa0419820:CDS
TGTGTCTTGGAATACTGCAA+CGG 0.632552 3_2:-68002398 Msa0419820:CDS
TGCAACGGAACGCTTGACAT+GGG 0.633434 3_2:-68002383 Msa0419820:CDS
AAGTTTAGGCAGCGGCAATG+TGG 0.636851 3_2:+68001988 None:intergenic
TGAACTTAGTATGGGAGACA+AGG 0.637041 3_2:-68002075 Msa0419820:three_prime_UTR
GATTACTATACTTATGAACA+AGG 0.639840 3_2:-68002296 Msa0419820:three_prime_UTR
AAGGATTTATCAGTATGGAA+CGG 0.648053 3_2:-68001959 Msa0419820:three_prime_UTR
CGGAACGCTTGACATGGGAG+AGG 0.654299 3_2:-68002378 Msa0419820:CDS
CAGTATTCCAAGACACAAGG+TGG 0.655045 3_2:+68002404 None:intergenic
GATAACCAGAAAGAAGCACA+TGG 0.662417 3_2:+68002154 None:intergenic
TTCATTGGAGCACATCTACG+TGG 0.664036 3_2:+68001889 None:intergenic
GTCAAAGTGACATACAACAA+TGG 0.665004 3_2:-68004161 Msa0419820:CDS
TTGCAGTATTCCAAGACACA+AGG 0.680864 3_2:+68002401 None:intergenic
TGGGAATCCATGCAACCGGG+AGG 0.708383 3_2:-68003430 Msa0419820:CDS
GCTGTGTTAGTGTAGGACTG+AGG 0.717498 3_2:-68002124 Msa0419820:three_prime_UTR
ATAACCAGAAAGAAGCACAT+GGG 0.744709 3_2:+68002155 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATATTACATAATAAAATT+AGG - chr3_2:68002096-68002115 Msa0419820:three_prime_UTR 10.0%
!!! TTCAATAAATGATTTTTATT+TGG - chr3_2:68002367-68002386 Msa0419820:CDS 10.0%
!! GTATATTACATAATAAAATT+AGG - chr3_2:68002096-68002115 Msa0419820:three_prime_UTR 10.0%
!!! TTCAATAAATGATTTTTATT+TGG - chr3_2:68002367-68002386 Msa0419820:CDS 10.0%
!!! TTATGACTAAATACATTTTA+TGG + chr3_2:68002209-68002228 None:intergenic 15.0%
!!! TTATGACTAAATACATTTTA+TGG + chr3_2:68002209-68002228 None:intergenic 15.0%
!!! TGATCTTTTAAAGTTGATTA+TGG - chr3_2:68002024-68002043 Msa0419820:three_prime_UTR 20.0%
!!! TTTGAAACTATATCAATGTA+AGG - chr3_2:68002252-68002271 Msa0419820:three_prime_UTR 20.0%
!! TTATTAATGACACGTAAAAA+TGG + chr3_2:68002328-68002347 None:intergenic 20.0%
!! ACAATAACAAAATACAATTG+TGG - chr3_2:68002549-68002568 Msa0419820:intron 20.0%
!! GCATATTAAGAAGATAATAT+GGG + chr3_2:68002891-68002910 None:intergenic 20.0%
!! TTAATATGCCATAAAATCAT+TGG - chr3_2:68002902-68002921 Msa0419820:intron 20.0%
!! AATTCAGAAAAACAAAATCT+TGG + chr3_2:68002983-68003002 None:intergenic 20.0%
!!! ATTTACATATTTTATGCTTG+AGG - chr3_2:68003034-68003053 Msa0419820:intron 20.0%
!!! GACAGATTTTATATAATGAA+GGG + chr3_2:68003346-68003365 None:intergenic 20.0%
!! AATAATCAATTTGGATTTGT+GGG - chr3_2:68003411-68003430 Msa0419820:CDS 20.0%
!!! ATTTCAATATTTTATGCAAC+AGG + chr3_2:68003774-68003793 None:intergenic 20.0%
!!! TTCATAACTTTTGTTTTCAT+TGG + chr3_2:68004226-68004245 None:intergenic 20.0%
!!! TGATCTTTTAAAGTTGATTA+TGG - chr3_2:68002024-68002043 Msa0419820:three_prime_UTR 20.0%
!!! TTTGAAACTATATCAATGTA+AGG - chr3_2:68002252-68002271 Msa0419820:three_prime_UTR 20.0%
!! TTATTAATGACACGTAAAAA+TGG + chr3_2:68002328-68002347 None:intergenic 20.0%
!! ACAATAACAAAATACAATTG+TGG - chr3_2:68002549-68002568 Msa0419820:intron 20.0%
!! GCATATTAAGAAGATAATAT+GGG + chr3_2:68002891-68002910 None:intergenic 20.0%
!! TTAATATGCCATAAAATCAT+TGG - chr3_2:68002902-68002921 Msa0419820:intron 20.0%
!! AATTCAGAAAAACAAAATCT+TGG + chr3_2:68002983-68003002 None:intergenic 20.0%
!!! ATTTACATATTTTATGCTTG+AGG - chr3_2:68003034-68003053 Msa0419820:intron 20.0%
!!! GACAGATTTTATATAATGAA+GGG + chr3_2:68003346-68003365 None:intergenic 20.0%
!! AATAATCAATTTGGATTTGT+GGG - chr3_2:68003411-68003430 Msa0419820:CDS 20.0%
!!! ATTTCAATATTTTATGCAAC+AGG + chr3_2:68003774-68003793 None:intergenic 20.0%
!!! TTCATAACTTTTGTTTTCAT+TGG + chr3_2:68004226-68004245 None:intergenic 20.0%
! ATGTCTTTAATTGTAGAATG+TGG - chr3_2:68002228-68002247 Msa0419820:three_prime_UTR 25.0%
! TGTCTTTAATTGTAGAATGT+GGG - chr3_2:68002229-68002248 Msa0419820:three_prime_UTR 25.0%
! TAAAATGAATACTCTTTCTG+TGG - chr3_2:68002287-68002306 Msa0419820:three_prime_UTR 25.0%
! GGCATATTAAGAAGATAATA+TGG + chr3_2:68002892-68002911 None:intergenic 25.0%
!!! AATTCTCATTTTTATCTCAC+TGG - chr3_2:68003007-68003026 Msa0419820:intron 25.0%
!!! ATTCTCATTTTTATCTCACT+GGG - chr3_2:68003008-68003027 Msa0419820:intron 25.0%
!! GTGTTTAGTTTCTACAATAA+TGG - chr3_2:68003081-68003100 Msa0419820:intron 25.0%
! TAAAAAAAAAAAGGGCAACT+TGG + chr3_2:68003194-68003213 None:intergenic 25.0%
! AAACATTTGCAACAATCAAT+CGG + chr3_2:68003223-68003242 None:intergenic 25.0%
!! GGACAGATTTTATATAATGA+AGG + chr3_2:68003347-68003366 None:intergenic 25.0%
!! GTCCTATTTGAAATTTGAAA+TGG - chr3_2:68003363-68003382 Msa0419820:CDS 25.0%
! CTCCATTTCAAATTTCAAAT+AGG + chr3_2:68003368-68003387 None:intergenic 25.0%
! CACAAATCCAAATTGATTAT+TGG + chr3_2:68003412-68003431 None:intergenic 25.0%
! CAATAATCAATTTGGATTTG+TGG - chr3_2:68003410-68003429 Msa0419820:CDS 25.0%
!! TTTTATGCAACAGGAATTTT+AGG + chr3_2:68003765-68003784 None:intergenic 25.0%
! GATTACTATACTTATGAACA+AGG - chr3_2:68003801-68003820 Msa0419820:intron 25.0%
! ATGTCTTTAATTGTAGAATG+TGG - chr3_2:68002228-68002247 Msa0419820:three_prime_UTR 25.0%
! TGTCTTTAATTGTAGAATGT+GGG - chr3_2:68002229-68002248 Msa0419820:three_prime_UTR 25.0%
! TAAAATGAATACTCTTTCTG+TGG - chr3_2:68002287-68002306 Msa0419820:three_prime_UTR 25.0%
! GGCATATTAAGAAGATAATA+TGG + chr3_2:68002892-68002911 None:intergenic 25.0%
!!! AATTCTCATTTTTATCTCAC+TGG - chr3_2:68003007-68003026 Msa0419820:intron 25.0%
!!! ATTCTCATTTTTATCTCACT+GGG - chr3_2:68003008-68003027 Msa0419820:intron 25.0%
!! GTGTTTAGTTTCTACAATAA+TGG - chr3_2:68003081-68003100 Msa0419820:intron 25.0%
! TAAAAAAAAAAAGGGCAACT+TGG + chr3_2:68003194-68003213 None:intergenic 25.0%
! AAACATTTGCAACAATCAAT+CGG + chr3_2:68003223-68003242 None:intergenic 25.0%
!! GGACAGATTTTATATAATGA+AGG + chr3_2:68003347-68003366 None:intergenic 25.0%
!! GTCCTATTTGAAATTTGAAA+TGG - chr3_2:68003363-68003382 Msa0419820:CDS 25.0%
! CTCCATTTCAAATTTCAAAT+AGG + chr3_2:68003368-68003387 None:intergenic 25.0%
! CACAAATCCAAATTGATTAT+TGG + chr3_2:68003412-68003431 None:intergenic 25.0%
! CAATAATCAATTTGGATTTG+TGG - chr3_2:68003410-68003429 Msa0419820:CDS 25.0%
!! TTTTATGCAACAGGAATTTT+AGG + chr3_2:68003765-68003784 None:intergenic 25.0%
! GATTACTATACTTATGAACA+AGG - chr3_2:68003801-68003820 Msa0419820:intron 25.0%
TATACTTTATGGTTACACCT+TGG - chr3_2:68001905-68001924 Msa0419820:three_prime_UTR 30.0%
! GCATTTTGAATAGGTTTATG+TGG + chr3_2:68002070-68002089 None:intergenic 30.0%
!! TACACTGAAGCATTTTGAAT+AGG + chr3_2:68002079-68002098 None:intergenic 30.0%
!! ATCCCAAGTGTTGATAATAT+TGG - chr3_2:68002126-68002145 Msa0419820:three_prime_UTR 30.0%
TGCCAATATTATCAACACTT+GGG + chr3_2:68002131-68002150 None:intergenic 30.0%
ATGCCAATATTATCAACACT+TGG + chr3_2:68002132-68002151 None:intergenic 30.0%
GAAACTATATCAATGTAAGG+TGG - chr3_2:68002255-68002274 Msa0419820:three_prime_UTR 30.0%
CCAAAAATATCTACATCACA+TGG + chr3_2:68002505-68002524 None:intergenic 30.0%
! CCATGTGATGTAGATATTTT+TGG - chr3_2:68002502-68002521 Msa0419820:intron 30.0%
CGGAAGAGGAAAAAATAATT+AGG + chr3_2:68002622-68002641 None:intergenic 30.0%
!!! TTATTTTTTCCTCTTCCGAA+AGG - chr3_2:68002624-68002643 Msa0419820:intron 30.0%
! AATCCTTTTCAATCTGTTGA+AGG + chr3_2:68002717-68002736 None:intergenic 30.0%
! CAACAGATTGAAAAGGATTT+TGG - chr3_2:68002718-68002737 Msa0419820:intron 30.0%
! AGAGAAGTCCAATGATTTTA+TGG + chr3_2:68002913-68002932 None:intergenic 30.0%
ACCTTATTGTTTGATATTGC+CGG - chr3_2:68003156-68003175 Msa0419820:intron 30.0%
GGCAGCAGTAAAAAAAAAAA+GGG + chr3_2:68003202-68003221 None:intergenic 30.0%
TGATTGTTGCAAATGTTTGT+TGG - chr3_2:68003225-68003244 Msa0419820:intron 30.0%
!! GGCATTTGAAGTTTTAACAA+TGG + chr3_2:68003284-68003303 None:intergenic 30.0%
ATAGCAACAACCTTTATGTT+AGG - chr3_2:68003498-68003517 Msa0419820:intron 30.0%
AAATAAGCGACGATATATGA+TGG + chr3_2:68003589-68003608 None:intergenic 30.0%
! TATGAACAAGGCATCTTAAA+TGG - chr3_2:68003813-68003832 Msa0419820:intron 30.0%
!! TATTTTTGCTGTGTTAGTGT+AGG - chr3_2:68003966-68003985 Msa0419820:intron 30.0%
AAATCCTTAAGGAGAAGTTT+AGG + chr3_2:68004126-68004145 None:intergenic 30.0%
TCCTTAAGGATTTATCAGTA+TGG - chr3_2:68004133-68004152 Msa0419820:CDS 30.0%
TCCATACTGATAAATCCTTA+AGG + chr3_2:68004137-68004156 None:intergenic 30.0%
AAGGATTTATCAGTATGGAA+CGG - chr3_2:68004138-68004157 Msa0419820:CDS 30.0%
GGAACGGTAAGTTAAAAATA+AGG - chr3_2:68004154-68004173 Msa0419820:CDS 30.0%
! TTGCAATTTTGTATGAAACC+TGG - chr3_2:68004181-68004200 Msa0419820:CDS 30.0%
TATACTTTATGGTTACACCT+TGG - chr3_2:68001905-68001924 Msa0419820:three_prime_UTR 30.0%
! GCATTTTGAATAGGTTTATG+TGG + chr3_2:68002070-68002089 None:intergenic 30.0%
!! TACACTGAAGCATTTTGAAT+AGG + chr3_2:68002079-68002098 None:intergenic 30.0%
!! ATCCCAAGTGTTGATAATAT+TGG - chr3_2:68002126-68002145 Msa0419820:three_prime_UTR 30.0%
TGCCAATATTATCAACACTT+GGG + chr3_2:68002131-68002150 None:intergenic 30.0%
ATGCCAATATTATCAACACT+TGG + chr3_2:68002132-68002151 None:intergenic 30.0%
GAAACTATATCAATGTAAGG+TGG - chr3_2:68002255-68002274 Msa0419820:three_prime_UTR 30.0%
CCAAAAATATCTACATCACA+TGG + chr3_2:68002505-68002524 None:intergenic 30.0%
! CCATGTGATGTAGATATTTT+TGG - chr3_2:68002502-68002521 Msa0419820:intron 30.0%
CGGAAGAGGAAAAAATAATT+AGG + chr3_2:68002622-68002641 None:intergenic 30.0%
!!! TTATTTTTTCCTCTTCCGAA+AGG - chr3_2:68002624-68002643 Msa0419820:intron 30.0%
! AATCCTTTTCAATCTGTTGA+AGG + chr3_2:68002717-68002736 None:intergenic 30.0%
! CAACAGATTGAAAAGGATTT+TGG - chr3_2:68002718-68002737 Msa0419820:intron 30.0%
! AGAGAAGTCCAATGATTTTA+TGG + chr3_2:68002913-68002932 None:intergenic 30.0%
ACCTTATTGTTTGATATTGC+CGG - chr3_2:68003156-68003175 Msa0419820:intron 30.0%
GGCAGCAGTAAAAAAAAAAA+GGG + chr3_2:68003202-68003221 None:intergenic 30.0%
TGATTGTTGCAAATGTTTGT+TGG - chr3_2:68003225-68003244 Msa0419820:intron 30.0%
!! GGCATTTGAAGTTTTAACAA+TGG + chr3_2:68003284-68003303 None:intergenic 30.0%
ATAGCAACAACCTTTATGTT+AGG - chr3_2:68003498-68003517 Msa0419820:intron 30.0%
AAATAAGCGACGATATATGA+TGG + chr3_2:68003589-68003608 None:intergenic 30.0%
! TATGAACAAGGCATCTTAAA+TGG - chr3_2:68003813-68003832 Msa0419820:intron 30.0%
!! TATTTTTGCTGTGTTAGTGT+AGG - chr3_2:68003966-68003985 Msa0419820:intron 30.0%
AAATCCTTAAGGAGAAGTTT+AGG + chr3_2:68004126-68004145 None:intergenic 30.0%
TCCTTAAGGATTTATCAGTA+TGG - chr3_2:68004133-68004152 Msa0419820:CDS 30.0%
TCCATACTGATAAATCCTTA+AGG + chr3_2:68004137-68004156 None:intergenic 30.0%
AAGGATTTATCAGTATGGAA+CGG - chr3_2:68004138-68004157 Msa0419820:CDS 30.0%
GGAACGGTAAGTTAAAAATA+AGG - chr3_2:68004154-68004173 Msa0419820:CDS 30.0%
! TTGCAATTTTGTATGAAACC+TGG - chr3_2:68004181-68004200 Msa0419820:CDS 30.0%
GGGAAGGATGATATACTTTA+TGG - chr3_2:68001894-68001913 Msa0419820:three_prime_UTR 35.0%
GTCAAAGTGACATACAACAA+TGG - chr3_2:68001936-68001955 Msa0419820:three_prime_UTR 35.0%
ACAAGTTTCCGGTTATGAAT+GGG + chr3_2:68002159-68002178 None:intergenic 35.0%
! GTAAAAATGGAAAAGAGTGC+AGG + chr3_2:68002315-68002334 None:intergenic 35.0%
! TTACCTAGCTTGCATGAAAT+TGG - chr3_2:68002400-68002419 Msa0419820:CDS 35.0%
TTTCCAATTTCATGCAAGCT+AGG + chr3_2:68002406-68002425 None:intergenic 35.0%
ATATCTACATCACATGGACT+GGG + chr3_2:68002499-68002518 None:intergenic 35.0%
AATATCTACATCACATGGAC+TGG + chr3_2:68002500-68002519 None:intergenic 35.0%
AGTCATGATTCCAAACCTTT+CGG + chr3_2:68002642-68002661 None:intergenic 35.0%
! TTTGGAATCATGACTTCTTC+TGG - chr3_2:68002647-68002666 Msa0419820:intron 35.0%
TTGGAATCATGACTTCTTCT+GGG - chr3_2:68002648-68002667 Msa0419820:intron 35.0%
TCTCCTTCAACAGATTGAAA+AGG - chr3_2:68002711-68002730 Msa0419820:intron 35.0%
AAGGGGGAATCAATTAGAAA+AGG + chr3_2:68002827-68002846 None:intergenic 35.0%
! GTCACTTGTCTTTTGTCATT+TGG - chr3_2:68003059-68003078 Msa0419820:intron 35.0%
! ATAGTTCTACACAACAGTCT+GGG + chr3_2:68003111-68003130 None:intergenic 35.0%
CGGCAGCAGTAAAAAAAAAA+AGG + chr3_2:68003203-68003222 None:intergenic 35.0%
AATCAATTTGGATTTGTGGG+AGG - chr3_2:68003414-68003433 Msa0419820:CDS 35.0%
!!! CTTGTGTTGTTTTGTGTTGT+AGG + chr3_2:68003458-68003477 None:intergenic 35.0%
TGCATACTATCTGGATTACA+AGG - chr3_2:68003556-68003575 Msa0419820:intron 35.0%
!! GGAGTTGGTTTGAAATTCAA+AGG - chr3_2:68003834-68003853 Msa0419820:intron 35.0%
! ATAACCAGAAAGAAGCACAT+GGG + chr3_2:68003945-68003964 None:intergenic 35.0%
ACTGAGGAAAATCTGCAAAA+TGG - chr3_2:68003989-68004008 Msa0419820:intron 35.0%
AGGAAAATCTGCAAAATGGA+GGG - chr3_2:68003993-68004012 Msa0419820:intron 35.0%
GGATGTAGTGAACTTAGTAT+GGG - chr3_2:68004014-68004033 Msa0419820:intron 35.0%
GGGAAGGATGATATACTTTA+TGG - chr3_2:68001894-68001913 Msa0419820:three_prime_UTR 35.0%
GTCAAAGTGACATACAACAA+TGG - chr3_2:68001936-68001955 Msa0419820:three_prime_UTR 35.0%
ACAAGTTTCCGGTTATGAAT+GGG + chr3_2:68002159-68002178 None:intergenic 35.0%
! GTAAAAATGGAAAAGAGTGC+AGG + chr3_2:68002315-68002334 None:intergenic 35.0%
! TTACCTAGCTTGCATGAAAT+TGG - chr3_2:68002400-68002419 Msa0419820:CDS 35.0%
TTTCCAATTTCATGCAAGCT+AGG + chr3_2:68002406-68002425 None:intergenic 35.0%
ATATCTACATCACATGGACT+GGG + chr3_2:68002499-68002518 None:intergenic 35.0%
AATATCTACATCACATGGAC+TGG + chr3_2:68002500-68002519 None:intergenic 35.0%
AGTCATGATTCCAAACCTTT+CGG + chr3_2:68002642-68002661 None:intergenic 35.0%
! TTTGGAATCATGACTTCTTC+TGG - chr3_2:68002647-68002666 Msa0419820:intron 35.0%
TTGGAATCATGACTTCTTCT+GGG - chr3_2:68002648-68002667 Msa0419820:intron 35.0%
TCTCCTTCAACAGATTGAAA+AGG - chr3_2:68002711-68002730 Msa0419820:intron 35.0%
AAGGGGGAATCAATTAGAAA+AGG + chr3_2:68002827-68002846 None:intergenic 35.0%
! GTCACTTGTCTTTTGTCATT+TGG - chr3_2:68003059-68003078 Msa0419820:intron 35.0%
! ATAGTTCTACACAACAGTCT+GGG + chr3_2:68003111-68003130 None:intergenic 35.0%
CGGCAGCAGTAAAAAAAAAA+AGG + chr3_2:68003203-68003222 None:intergenic 35.0%
AATCAATTTGGATTTGTGGG+AGG - chr3_2:68003414-68003433 Msa0419820:CDS 35.0%
!!! CTTGTGTTGTTTTGTGTTGT+AGG + chr3_2:68003458-68003477 None:intergenic 35.0%
TGCATACTATCTGGATTACA+AGG - chr3_2:68003556-68003575 Msa0419820:intron 35.0%
!! GGAGTTGGTTTGAAATTCAA+AGG - chr3_2:68003834-68003853 Msa0419820:intron 35.0%
! ATAACCAGAAAGAAGCACAT+GGG + chr3_2:68003945-68003964 None:intergenic 35.0%
ACTGAGGAAAATCTGCAAAA+TGG - chr3_2:68003989-68004008 Msa0419820:intron 35.0%
AGGAAAATCTGCAAAATGGA+GGG - chr3_2:68003993-68004012 Msa0419820:intron 35.0%
GGATGTAGTGAACTTAGTAT+GGG - chr3_2:68004014-68004033 Msa0419820:intron 35.0%
AAGGTTTGAACGAACAGCTT+GGG - chr3_2:68001874-68001893 Msa0419820:three_prime_UTR 40.0%
! CACTTTGACTAGTTCATCCA+AGG + chr3_2:68001925-68001944 None:intergenic 40.0%
! AGTTGATTATGGCTCTGTAG+CGG - chr3_2:68002035-68002054 Msa0419820:three_prime_UTR 40.0%
CAAGTTTCCGGTTATGAATG+GGG + chr3_2:68002158-68002177 None:intergenic 40.0%
CACAAGTTTCCGGTTATGAA+TGG + chr3_2:68002160-68002179 None:intergenic 40.0%
TCAGAAGAGTTTCAGACTCT+CGG + chr3_2:68002184-68002203 None:intergenic 40.0%
! TTTTCCTCTTCCGAAAGGTT+TGG - chr3_2:68002629-68002648 Msa0419820:intron 40.0%
TGTTGAAGGAGACCTAGAAT+GGG + chr3_2:68002703-68002722 None:intergenic 40.0%
GAAGCTGCACTTACATTGTT+TGG - chr3_2:68002772-68002791 Msa0419820:intron 40.0%
! GCACTTACATTGTTTGGTTC+TGG - chr3_2:68002778-68002797 Msa0419820:intron 40.0%
!! TTACATTGTTTGGTTCTGGC+TGG - chr3_2:68002782-68002801 Msa0419820:intron 40.0%
!! TACATTGTTTGGTTCTGGCT+GGG - chr3_2:68002783-68002802 Msa0419820:intron 40.0%
CACATCACTTTAGCAAGACA+GGG + chr3_2:68002852-68002871 None:intergenic 40.0%
ACACATCACTTTAGCAAGAC+AGG + chr3_2:68002853-68002872 None:intergenic 40.0%
! CATAGTTCTACACAACAGTC+TGG + chr3_2:68003112-68003131 None:intergenic 40.0%
GCCGGCAATATCAAACAATA+AGG + chr3_2:68003160-68003179 None:intergenic 40.0%
CTATATCACCCCACACAATT+GGG + chr3_2:68003312-68003331 None:intergenic 40.0%
ACTATATCACCCCACACAAT+TGG + chr3_2:68003313-68003332 None:intergenic 40.0%
TCGTGCGCCAATAATCAATT+TGG - chr3_2:68003402-68003421 Msa0419820:CDS 40.0%
GTCAGTGATGCCTAACATAA+AGG + chr3_2:68003511-68003530 None:intergenic 40.0%
AGATAGTATGCATGCTGCAT+TGG + chr3_2:68003548-68003567 None:intergenic 40.0%
AATGCAGCATGCATACTATC+TGG - chr3_2:68003547-68003566 Msa0419820:intron 40.0%
TTGCAGTATTCCAAGACACA+AGG + chr3_2:68003699-68003718 None:intergenic 40.0%
TGTGTCTTGGAATACTGCAA+CGG - chr3_2:68003699-68003718 Msa0419820:intron 40.0%
! CAAGGCATCTTAAATGGAGT+TGG - chr3_2:68003819-68003838 Msa0419820:intron 40.0%
TCAAAGGCTTCACATGTCAT+AGG - chr3_2:68003850-68003869 Msa0419820:intron 40.0%
CAAAGGCTTCACATGTCATA+GGG - chr3_2:68003851-68003870 Msa0419820:intron 40.0%
! GATAACCAGAAAGAAGCACA+TGG + chr3_2:68003946-68003965 None:intergenic 40.0%
GAGGAAAATCTGCAAAATGG+AGG - chr3_2:68003992-68004011 Msa0419820:intron 40.0%
GGGATGTAGTGAACTTAGTA+TGG - chr3_2:68004013-68004032 Msa0419820:intron 40.0%
TGAACTTAGTATGGGAGACA+AGG - chr3_2:68004022-68004041 Msa0419820:intron 40.0%
TTAAGGAGAAGTTTAGGCAG+CGG + chr3_2:68004120-68004139 None:intergenic 40.0%
AAGGTTTGAACGAACAGCTT+GGG - chr3_2:68001874-68001893 Msa0419820:three_prime_UTR 40.0%
! CACTTTGACTAGTTCATCCA+AGG + chr3_2:68001925-68001944 None:intergenic 40.0%
! AGTTGATTATGGCTCTGTAG+CGG - chr3_2:68002035-68002054 Msa0419820:three_prime_UTR 40.0%
CAAGTTTCCGGTTATGAATG+GGG + chr3_2:68002158-68002177 None:intergenic 40.0%
CACAAGTTTCCGGTTATGAA+TGG + chr3_2:68002160-68002179 None:intergenic 40.0%
TCAGAAGAGTTTCAGACTCT+CGG + chr3_2:68002184-68002203 None:intergenic 40.0%
! TTTTCCTCTTCCGAAAGGTT+TGG - chr3_2:68002629-68002648 Msa0419820:intron 40.0%
TGTTGAAGGAGACCTAGAAT+GGG + chr3_2:68002703-68002722 None:intergenic 40.0%
GAAGCTGCACTTACATTGTT+TGG - chr3_2:68002772-68002791 Msa0419820:intron 40.0%
! GCACTTACATTGTTTGGTTC+TGG - chr3_2:68002778-68002797 Msa0419820:intron 40.0%
!! TTACATTGTTTGGTTCTGGC+TGG - chr3_2:68002782-68002801 Msa0419820:intron 40.0%
!! TACATTGTTTGGTTCTGGCT+GGG - chr3_2:68002783-68002802 Msa0419820:intron 40.0%
CACATCACTTTAGCAAGACA+GGG + chr3_2:68002852-68002871 None:intergenic 40.0%
ACACATCACTTTAGCAAGAC+AGG + chr3_2:68002853-68002872 None:intergenic 40.0%
! CATAGTTCTACACAACAGTC+TGG + chr3_2:68003112-68003131 None:intergenic 40.0%
GCCGGCAATATCAAACAATA+AGG + chr3_2:68003160-68003179 None:intergenic 40.0%
CTATATCACCCCACACAATT+GGG + chr3_2:68003312-68003331 None:intergenic 40.0%
ACTATATCACCCCACACAAT+TGG + chr3_2:68003313-68003332 None:intergenic 40.0%
TCGTGCGCCAATAATCAATT+TGG - chr3_2:68003402-68003421 Msa0419820:CDS 40.0%
GTCAGTGATGCCTAACATAA+AGG + chr3_2:68003511-68003530 None:intergenic 40.0%
AGATAGTATGCATGCTGCAT+TGG + chr3_2:68003548-68003567 None:intergenic 40.0%
AATGCAGCATGCATACTATC+TGG - chr3_2:68003547-68003566 Msa0419820:intron 40.0%
TTGCAGTATTCCAAGACACA+AGG + chr3_2:68003699-68003718 None:intergenic 40.0%
TGTGTCTTGGAATACTGCAA+CGG - chr3_2:68003699-68003718 Msa0419820:intron 40.0%
! CAAGGCATCTTAAATGGAGT+TGG - chr3_2:68003819-68003838 Msa0419820:intron 40.0%
TCAAAGGCTTCACATGTCAT+AGG - chr3_2:68003850-68003869 Msa0419820:intron 40.0%
CAAAGGCTTCACATGTCATA+GGG - chr3_2:68003851-68003870 Msa0419820:intron 40.0%
! GATAACCAGAAAGAAGCACA+TGG + chr3_2:68003946-68003965 None:intergenic 40.0%
GAGGAAAATCTGCAAAATGG+AGG - chr3_2:68003992-68004011 Msa0419820:intron 40.0%
GGGATGTAGTGAACTTAGTA+TGG - chr3_2:68004013-68004032 Msa0419820:intron 40.0%
TGAACTTAGTATGGGAGACA+AGG - chr3_2:68004022-68004041 Msa0419820:intron 40.0%
TTAAGGAGAAGTTTAGGCAG+CGG + chr3_2:68004120-68004139 None:intergenic 40.0%
GAAGGTTTGAACGAACAGCT+TGG - chr3_2:68001873-68001892 Msa0419820:three_prime_UTR 45.0%
TTTGAACGAACAGCTTGGGA+AGG - chr3_2:68001878-68001897 Msa0419820:three_prime_UTR 45.0%
GCATTGTTGAACTCAGGTGA+GGG + chr3_2:68001966-68001985 None:intergenic 45.0%
TGCATTGTTGAACTCAGGTG+AGG + chr3_2:68001967-68001986 None:intergenic 45.0%
TCAGCTGCATTGTTGAACTC+AGG + chr3_2:68001972-68001991 None:intergenic 45.0%
TGAGTTCAACAATGCAGCTG+AGG - chr3_2:68001971-68001990 Msa0419820:three_prime_UTR 45.0%
GCATCTTCCCCATTCATAAC+CGG - chr3_2:68002148-68002167 Msa0419820:three_prime_UTR 45.0%
CAGAAGAGTTTCAGACTCTC+GGG + chr3_2:68002183-68002202 None:intergenic 45.0%
AATTGTCTGCCCAATCTGTG+TGG - chr3_2:68002424-68002443 Msa0419820:CDS 45.0%
ATTGTCTGCCCAATCTGTGT+GGG - chr3_2:68002425-68002444 Msa0419820:CDS 45.0%
! AGCCTTATCCCACACAGATT+GGG + chr3_2:68002436-68002455 None:intergenic 45.0%
! AAGCCTTATCCCACACAGAT+TGG + chr3_2:68002437-68002456 None:intergenic 45.0%
AATCTGTGTGGGATAAGGCT+TGG - chr3_2:68002436-68002455 Msa0419820:intron 45.0%
GATTCCAAACCTTTCGGAAG+AGG + chr3_2:68002636-68002655 None:intergenic 45.0%
CTGTTGAAGGAGACCTAGAA+TGG + chr3_2:68002704-68002723 None:intergenic 45.0%
TTTAGCAAGACAGGGAGAAG+GGG + chr3_2:68002844-68002863 None:intergenic 45.0%
CTTTAGCAAGACAGGGAGAA+GGG + chr3_2:68002845-68002864 None:intergenic 45.0%
ACTTTAGCAAGACAGGGAGA+AGG + chr3_2:68002846-68002865 None:intergenic 45.0%
!! AACTTGGTGCACTAAATCGC+CGG + chr3_2:68003178-68003197 None:intergenic 45.0%
! ATGCCATTTGCCCAATTGTG+TGG - chr3_2:68003299-68003318 Msa0419820:intron 45.0%
! TGCCATTTGCCCAATTGTGT+GGG - chr3_2:68003300-68003319 Msa0419820:intron 45.0%
TTCTGAACCACCTTGTGTCT+TGG - chr3_2:68003686-68003705 Msa0419820:intron 45.0%
CAGTATTCCAAGACACAAGG+TGG + chr3_2:68003696-68003715 None:intergenic 45.0%
! GGAGAGGCTTTTGTGAACTT+GGG - chr3_2:68003735-68003754 Msa0419820:intron 45.0%
GCTGCCTAAACTTCTCCTTA+AGG - chr3_2:68004119-68004138 Msa0419820:intron 45.0%
TTCATTGGAGCACATCTACG+TGG + chr3_2:68004211-68004230 None:intergenic 45.0%
GAAGGTTTGAACGAACAGCT+TGG - chr3_2:68001873-68001892 Msa0419820:three_prime_UTR 45.0%
TTTGAACGAACAGCTTGGGA+AGG - chr3_2:68001878-68001897 Msa0419820:three_prime_UTR 45.0%
GCATTGTTGAACTCAGGTGA+GGG + chr3_2:68001966-68001985 None:intergenic 45.0%
TGCATTGTTGAACTCAGGTG+AGG + chr3_2:68001967-68001986 None:intergenic 45.0%
TCAGCTGCATTGTTGAACTC+AGG + chr3_2:68001972-68001991 None:intergenic 45.0%
TGAGTTCAACAATGCAGCTG+AGG - chr3_2:68001971-68001990 Msa0419820:three_prime_UTR 45.0%
GCATCTTCCCCATTCATAAC+CGG - chr3_2:68002148-68002167 Msa0419820:three_prime_UTR 45.0%
CAGAAGAGTTTCAGACTCTC+GGG + chr3_2:68002183-68002202 None:intergenic 45.0%
AATTGTCTGCCCAATCTGTG+TGG - chr3_2:68002424-68002443 Msa0419820:CDS 45.0%
ATTGTCTGCCCAATCTGTGT+GGG - chr3_2:68002425-68002444 Msa0419820:CDS 45.0%
! AGCCTTATCCCACACAGATT+GGG + chr3_2:68002436-68002455 None:intergenic 45.0%
! AAGCCTTATCCCACACAGAT+TGG + chr3_2:68002437-68002456 None:intergenic 45.0%
AATCTGTGTGGGATAAGGCT+TGG - chr3_2:68002436-68002455 Msa0419820:intron 45.0%
GATTCCAAACCTTTCGGAAG+AGG + chr3_2:68002636-68002655 None:intergenic 45.0%
CTGTTGAAGGAGACCTAGAA+TGG + chr3_2:68002704-68002723 None:intergenic 45.0%
TTTAGCAAGACAGGGAGAAG+GGG + chr3_2:68002844-68002863 None:intergenic 45.0%
CTTTAGCAAGACAGGGAGAA+GGG + chr3_2:68002845-68002864 None:intergenic 45.0%
ACTTTAGCAAGACAGGGAGA+AGG + chr3_2:68002846-68002865 None:intergenic 45.0%
!! AACTTGGTGCACTAAATCGC+CGG + chr3_2:68003178-68003197 None:intergenic 45.0%
! ATGCCATTTGCCCAATTGTG+TGG - chr3_2:68003299-68003318 Msa0419820:intron 45.0%
! TGCCATTTGCCCAATTGTGT+GGG - chr3_2:68003300-68003319 Msa0419820:intron 45.0%
TTCTGAACCACCTTGTGTCT+TGG - chr3_2:68003686-68003705 Msa0419820:intron 45.0%
CAGTATTCCAAGACACAAGG+TGG + chr3_2:68003696-68003715 None:intergenic 45.0%
! GGAGAGGCTTTTGTGAACTT+GGG - chr3_2:68003735-68003754 Msa0419820:intron 45.0%
GCTGCCTAAACTTCTCCTTA+AGG - chr3_2:68004119-68004138 Msa0419820:intron 45.0%
TTCATTGGAGCACATCTACG+TGG + chr3_2:68004211-68004230 None:intergenic 45.0%
TGCCCAATCTGTGTGGGATA+AGG - chr3_2:68002431-68002450 Msa0419820:CDS 50.0%
! CTTCTGGGAATCCATGCAAC+CGG - chr3_2:68002663-68002682 Msa0419820:intron 50.0%
! TTCTGGGAATCCATGCAACC+GGG - chr3_2:68002664-68002683 Msa0419820:intron 50.0%
!! TGTTTGGTTCTGGCTGGGTT+TGG - chr3_2:68002788-68002807 Msa0419820:intron 50.0%
TTAGCAAGACAGGGAGAAGG+GGG + chr3_2:68002843-68002862 None:intergenic 50.0%
GCCATTTGCCCAATTGTGTG+GGG - chr3_2:68003301-68003320 Msa0419820:intron 50.0%
ACCCCACACAATTGGGCAAA+TGG + chr3_2:68003305-68003324 None:intergenic 50.0%
TGCAACGGAACGCTTGACAT+GGG - chr3_2:68003714-68003733 Msa0419820:intron 50.0%
! GGGAGAGGCTTTTGTGAACT+TGG - chr3_2:68003734-68003753 Msa0419820:intron 50.0%
GGCTTCACATGTCATAGGGT+TGG - chr3_2:68003855-68003874 Msa0419820:intron 50.0%
CTGATCCACTCCTTCCTTTC+TGG + chr3_2:68003893-68003912 None:intergenic 50.0%
GCTGTGTTAGTGTAGGACTG+AGG - chr3_2:68003973-68003992 Msa0419820:intron 50.0%
AAGTTTAGGCAGCGGCAATG+TGG + chr3_2:68004112-68004131 None:intergenic 50.0%
TGCCCAATCTGTGTGGGATA+AGG - chr3_2:68002431-68002450 Msa0419820:CDS 50.0%
! CTTCTGGGAATCCATGCAAC+CGG - chr3_2:68002663-68002682 Msa0419820:intron 50.0%
! TTCTGGGAATCCATGCAACC+GGG - chr3_2:68002664-68002683 Msa0419820:intron 50.0%
!! TGTTTGGTTCTGGCTGGGTT+TGG - chr3_2:68002788-68002807 Msa0419820:intron 50.0%
TTAGCAAGACAGGGAGAAGG+GGG + chr3_2:68002843-68002862 None:intergenic 50.0%
GCCATTTGCCCAATTGTGTG+GGG - chr3_2:68003301-68003320 Msa0419820:intron 50.0%
ACCCCACACAATTGGGCAAA+TGG + chr3_2:68003305-68003324 None:intergenic 50.0%
TGCAACGGAACGCTTGACAT+GGG - chr3_2:68003714-68003733 Msa0419820:intron 50.0%
! GGGAGAGGCTTTTGTGAACT+TGG - chr3_2:68003734-68003753 Msa0419820:intron 50.0%
GGCTTCACATGTCATAGGGT+TGG - chr3_2:68003855-68003874 Msa0419820:intron 50.0%
CTGATCCACTCCTTCCTTTC+TGG + chr3_2:68003893-68003912 None:intergenic 50.0%
GCTGTGTTAGTGTAGGACTG+AGG - chr3_2:68003973-68003992 Msa0419820:intron 50.0%
AAGTTTAGGCAGCGGCAATG+TGG + chr3_2:68004112-68004131 None:intergenic 50.0%
GACTCTCGGGCACAAGTTTC+CGG + chr3_2:68002170-68002189 None:intergenic 55.0%
GGAGGTGATAGGCCCATTCT+AGG - chr3_2:68002688-68002707 Msa0419820:CDS 55.0%
CTGCAACGGAACGCTTGACA+TGG - chr3_2:68003713-68003732 Msa0419820:intron 55.0%
GTACAGCCAGCCAGAAAGGA+AGG - chr3_2:68003880-68003899 Msa0419820:intron 55.0%
! TCCACTCCTTCCTTTCTGGC+TGG + chr3_2:68003889-68003908 None:intergenic 55.0%
GCGTCCCATGTGCTTCTTTC+TGG - chr3_2:68003938-68003957 Msa0419820:intron 55.0%
GCACATCTACGTGGCAATCC+AGG + chr3_2:68004202-68004221 None:intergenic 55.0%
GACTCTCGGGCACAAGTTTC+CGG + chr3_2:68002170-68002189 None:intergenic 55.0%
GGAGGTGATAGGCCCATTCT+AGG - chr3_2:68002688-68002707 Msa0419820:CDS 55.0%
CTGCAACGGAACGCTTGACA+TGG - chr3_2:68003713-68003732 Msa0419820:intron 55.0%
GTACAGCCAGCCAGAAAGGA+AGG - chr3_2:68003880-68003899 Msa0419820:intron 55.0%
! TCCACTCCTTCCTTTCTGGC+TGG + chr3_2:68003889-68003908 None:intergenic 55.0%
GCGTCCCATGTGCTTCTTTC+TGG - chr3_2:68003938-68003957 Msa0419820:intron 55.0%
GCACATCTACGTGGCAATCC+AGG + chr3_2:68004202-68004221 None:intergenic 55.0%
TGGGAATCCATGCAACCGGG+AGG - chr3_2:68002667-68002686 Msa0419820:intron 60.0%
GAATCCATGCAACCGGGAGG+AGG - chr3_2:68002670-68002689 Msa0419820:intron 60.0%
ATCACCTCCTCCCGGTTGCA+TGG + chr3_2:68002677-68002696 None:intergenic 60.0%
TGCAACCGGGAGGAGGTGAT+AGG - chr3_2:68002677-68002696 Msa0419820:intron 60.0%
ATGGGCCTATCACCTCCTCC+CGG + chr3_2:68002685-68002704 None:intergenic 60.0%
CGGAACGCTTGACATGGGAG+AGG - chr3_2:68003719-68003738 Msa0419820:intron 60.0%
GGTCGTACAGCCAGCCAGAA+AGG - chr3_2:68003876-68003895 Msa0419820:intron 60.0%
GCCAGCCAGAAAGGAAGGAG+TGG - chr3_2:68003885-68003904 Msa0419820:intron 60.0%
TGGGAATCCATGCAACCGGG+AGG - chr3_2:68002667-68002686 Msa0419820:intron 60.0%
GAATCCATGCAACCGGGAGG+AGG - chr3_2:68002670-68002689 Msa0419820:intron 60.0%
ATCACCTCCTCCCGGTTGCA+TGG + chr3_2:68002677-68002696 None:intergenic 60.0%
TGCAACCGGGAGGAGGTGAT+AGG - chr3_2:68002677-68002696 Msa0419820:intron 60.0%
ATGGGCCTATCACCTCCTCC+CGG + chr3_2:68002685-68002704 None:intergenic 60.0%
CGGAACGCTTGACATGGGAG+AGG - chr3_2:68003719-68003738 Msa0419820:intron 60.0%
GGTCGTACAGCCAGCCAGAA+AGG - chr3_2:68003876-68003895 Msa0419820:intron 60.0%
GCCAGCCAGAAAGGAAGGAG+TGG - chr3_2:68003885-68003904 Msa0419820:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 68001867 68004252 68001867 ID=Msa0419820;Name=Msa0419820
chr3_2 mRNA 68001867 68004252 68001867 ID=Msa0419820-mRNA-1;Parent=Msa0419820;Name=Msa0419820-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.75|0.8|1|0.5|0.8|5|470|159
chr3_2 exon 68001867 68002453 68001867 ID=Msa0419820-mRNA-1:exon:15959;Parent=Msa0419820-mRNA-1
chr3_2 exon 68002542 68002565 68002542 ID=Msa0419820-mRNA-1:exon:15958;Parent=Msa0419820-mRNA-1
chr3_2 exon 68002684 68002724 68002684 ID=Msa0419820-mRNA-1:exon:15957;Parent=Msa0419820-mRNA-1
chr3_2 exon 68003302 68003473 68003302 ID=Msa0419820-mRNA-1:exon:15956;Parent=Msa0419820-mRNA-1
chr3_2 exon 68004127 68004252 68004127 ID=Msa0419820-mRNA-1:exon:15955;Parent=Msa0419820-mRNA-1
chr3_2 CDS 68004127 68004252 68004127 ID=Msa0419820-mRNA-1:cds;Parent=Msa0419820-mRNA-1
chr3_2 CDS 68003302 68003473 68003302 ID=Msa0419820-mRNA-1:cds;Parent=Msa0419820-mRNA-1
chr3_2 CDS 68002684 68002724 68002684 ID=Msa0419820-mRNA-1:cds;Parent=Msa0419820-mRNA-1
chr3_2 CDS 68002542 68002565 68002542 ID=Msa0419820-mRNA-1:cds;Parent=Msa0419820-mRNA-1
chr3_2 CDS 68002337 68002453 68002337 ID=Msa0419820-mRNA-1:cds;Parent=Msa0419820-mRNA-1
chr3_2 three_prime_UTR 68001867 68002336 68001867 ID=Msa0419820-mRNA-1:three_prime_utr;Parent=Msa0419820-mRNA-1
Gene Sequence

>Msa0419820

TTTGTTGAAGGTTTGAACGAACAGCTTGGGAAGGATGATATACTTTATGGTTACACCTTGGATGAACTAGTCAAAGTGACATACAACAATGGCAATCCCTCACCTGAGTTCAACAATGCAGCTGAGGTTTGGAATCATGACTTCTTCTGGGAATCCATGCAACCGGGAGGAGGTGATAGGCCCATTCTAGGTCTCCTTCAACAGATTGAAAAGGATTTTGGATCATTTACGAATTTCAAAGAAAAGTTTACAGAAGCTGCACTTACATTGTTTGGTTCTGGCTGGGTTTGGCTAGTTTTCTTTTCTCGTGCGCCAATAATCAATTTGGATTTGTGGGAGCATGCATACTATCTGGATTACAAGAGCAAAGTATGTGAATGTATTTCTGAACCACCTTGTGTCTTGGAATACTGCAACGGAACGCTTGACATGGGAGAGGCTTTTGTGAACTTGGGAGAACCTAAAATTCCTGTTGCATAA

Protein sequence

>Msa0419820

FVEGLNEQLGKDDILYGYTLDELVKVTYNNGNPSPEFNNAAEVWNHDFFWESMQPGGGDRPILGLLQQIEKDFGSFTNFKEKFTEAALTLFGSGWVWLVFFSRAPIINLDLWEHAYYLDYKSKVCECISEPPCVLEYCNGTLDMGEAFVNLGEPKIPVA*