AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0581760


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0581760 MtrunA17_Chr4g0074591 96.944 360 10 1 1 360 1 359 0.0 715
Msa0581760 MtrunA17_Chr2g0288101 69.459 370 102 2 12 379 2 362 0.0 528
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0581760 AT4G04880.1 66.575 362 110 1 13 374 1 351 2.12e-176 495
Msa0581760 AT4G04880.2 61.637 391 110 2 13 374 1 380 2.50e-170 481
Msa0581760 AT4G04880.3 68.889 270 73 1 13 282 1 259 1.87e-131 378

Find 120 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATTGGAAATGAGGCATTT+TGG 0.146875 4_1:+87261280 Msa0581760:CDS
TCAATTGATGCTCATCATTT+TGG 0.186433 4_1:+87262076 Msa0581760:CDS
ATCTGTCAGTTCGGTTGATC+TGG 0.224791 4_1:+87261007 Msa0581760:CDS
ACTAAAGAATAGATTGAAAT+TGG 0.226773 4_1:+87262931 Msa0581760:three_prime_UTR
CATGCATGTCCAATCCTTTC+AGG 0.257021 4_1:-87261635 None:intergenic
TTCGATGTTATGATGCTTAC+TGG 0.265041 4_1:+87262834 Msa0581760:three_prime_UTR
GTTTCAGTGGCTAGTGAAAT+TGG 0.268013 4_1:+87263009 Msa0581760:three_prime_UTR
AAAATTGCTGCTTCTTCATT+TGG 0.270139 4_1:+87262552 Msa0581760:CDS
GCATTTAACTGGACTGTTCT+TGG 0.273826 4_1:+87262984 Msa0581760:three_prime_UTR
CTTCTTAACAAGTTCTCTTA+AGG 0.289773 4_1:-87263255 None:intergenic
CTTTCTTGCGTCTTGTATCT+TGG 0.292422 4_1:-87259745 None:intergenic
GCATAATAATATCATTAATA+TGG 0.293607 4_1:-87263179 None:intergenic
AATGAGTTAACAAGGTTGTT+TGG 0.296616 4_1:+87262901 Msa0581760:three_prime_UTR
GATGGTGTGGATGTGTATTT+AGG 0.311844 4_1:+87262808 Msa0581760:three_prime_UTR
ACTAAAATTTGCTCGAGAAC+AGG 0.322893 4_1:+87261459 Msa0581760:CDS
TTATAAATCAGGCATTTAAC+TGG 0.323277 4_1:+87262973 Msa0581760:three_prime_UTR
GTTGTTGGAATTGACCTCTC+TGG 0.326172 4_1:+87261304 Msa0581760:CDS
TTTGTTTGACATCAAACATT+AGG 0.333028 4_1:+87262038 Msa0581760:CDS
ATGAGTTAACAAGGTTGTTT+GGG 0.333110 4_1:+87262902 Msa0581760:three_prime_UTR
TGCTAAAGGTTTGGGTGATA+AGG 0.334141 4_1:+87259940 Msa0581760:CDS
CAGCGAACTTGCTAAAGGTT+TGG 0.334780 4_1:+87259931 Msa0581760:intron
TATATTTGACCGCTTGAGAT+AGG 0.339541 4_1:+87263141 Msa0581760:three_prime_UTR
CAGGTCAAGTGAAGTCATTT+TGG 0.342711 4_1:+87263043 Msa0581760:three_prime_UTR
AGAGCGTTTGCTCATTCCTT+TGG 0.345646 4_1:-87260955 None:intergenic
AGCGAACTTGCTAAAGGTTT+GGG 0.357859 4_1:+87259932 Msa0581760:intron
TGAGGATAACATGCTGGACT+TGG 0.366709 4_1:-87259979 None:intergenic
TTCTTAACAAGTTCTCTTAA+GGG 0.375495 4_1:-87263254 None:intergenic
GCTAAAGGTTTGGGTGATAA+GGG 0.384911 4_1:+87259941 Msa0581760:CDS
TATATTGAAGCTGTACTTGA+AGG 0.391559 4_1:+87260978 Msa0581760:CDS
TGAGCATGCAATTCTACCTT+TGG 0.392099 4_1:-87259798 None:intergenic
TGCTGTTGAATTTATATTTG+CGG 0.392971 4_1:+87262701 Msa0581760:CDS
GCTGAAATCGTCTAAAATTC+CGG 0.393662 4_1:+87261685 Msa0581760:CDS
TTTGTATTCGTTGGAGAGAC+TGG 0.404259 4_1:-87262532 None:intergenic
CTGAGAGTATAGGGTTTGAA+TGG 0.407987 4_1:-87261061 None:intergenic
TAGCTGAGACTGAGAGTATA+GGG 0.413511 4_1:-87261070 None:intergenic
TTGTTGGAATTGACCTCTCT+GGG 0.414570 4_1:+87261305 Msa0581760:CDS
CTTAAGAGAACTTGTTAAGA+AGG 0.416179 4_1:+87263256 Msa0581760:three_prime_UTR
AAATGATGAGCATCAATTGA+TGG 0.417937 4_1:-87262073 None:intergenic
TAGTTTAGCAGCAAATGATC+TGG 0.425802 4_1:+87262758 Msa0581760:CDS
TCATGTATCTCCCTCAAGTT+AGG 0.430418 4_1:-87261596 None:intergenic
TTGTTAGGTGCCTAACTTGA+GGG 0.431636 4_1:+87261586 Msa0581760:intron
GACTTTCTTCCTGAAAGGAT+TGG 0.446859 4_1:+87261626 Msa0581760:CDS
GTAGCTGAGACTGAGAGTAT+AGG 0.447249 4_1:-87261071 None:intergenic
CAAGCGGTCAAATATAACTT+TGG 0.465490 4_1:-87263134 None:intergenic
GGCTTCTCTTAAGCATTGAC+CGG 0.466053 4_1:+87261138 Msa0581760:CDS
ATATTTGACCGCTTGAGATA+GGG 0.473201 4_1:+87263142 Msa0581760:three_prime_UTR
TGGACATGCATGTTTCTTTG+AGG 0.475411 4_1:+87261646 Msa0581760:CDS
TGCTTACTGGGTATACAGTA+AGG 0.476050 4_1:+87262847 Msa0581760:three_prime_UTR
TTTCCCAGCGAACTTGCTAA+AGG 0.480413 4_1:+87259926 Msa0581760:intron
CTGCTTCCGTTGTCTCCCTC+CGG 0.484826 4_1:-87261157 None:intergenic
GAATTGCATGCTCACCTCAA+TGG 0.485177 4_1:+87259807 Msa0581760:CDS
TCTGTCAGTTCGGTTGATCT+GGG 0.486875 4_1:+87261008 Msa0581760:CDS
GAAATTGGAATGGTCAGGTC+AGG 0.495433 4_1:+87263024 Msa0581760:three_prime_UTR
TGCGGATAACACGGCAAAAG+AGG 0.497210 4_1:+87262719 Msa0581760:CDS
GAAAGGAGAGTGAGATGGAG+TGG 0.497436 4_1:+87259763 Msa0581760:CDS
TTTAACTGGACTGTTCTTGG+AGG 0.506134 4_1:+87262987 Msa0581760:three_prime_UTR
GGAATCCAGCCGTTGGTGAA+TGG 0.506410 4_1:+87261326 Msa0581760:CDS
TTGAGGAGGAACACTGGAGA+AGG 0.507250 4_1:+87261663 Msa0581760:CDS
TCTAGGTACAATGACGTACA+TGG 0.509146 4_1:+87262784 Msa0581760:exon
TGCTTGACTTTCTTCCTGAA+AGG 0.513219 4_1:+87261621 Msa0581760:CDS
TCATCAGTACACAGGACTAC+AGG 0.514472 4_1:-87262492 None:intergenic
AATATTGGATTGAGAAGCAT+AGG 0.514496 4_1:+87259623 Msa0581760:five_prime_UTR
AAAGGTATGTGTTGATAAAG+TGG 0.514853 4_1:+87263091 Msa0581760:three_prime_UTR
CTAAAATTTGCTCGAGAACA+GGG 0.517085 4_1:+87261460 Msa0581760:CDS
GGAGACAACGGAAGCAGCAA+TGG 0.518470 4_1:+87261163 Msa0581760:CDS
TCATGCTTGCATTGGAAATG+AGG 0.520953 4_1:+87261272 Msa0581760:CDS
GCTGTAGGTCATGCTTGCAT+TGG 0.522986 4_1:+87261264 Msa0581760:intron
ACTGTTCTTGGAGGTTTCAG+TGG 0.525239 4_1:+87262996 Msa0581760:three_prime_UTR
CAGAAGTGTGGAGTCTCTGA+TGG 0.532446 4_1:-87259832 None:intergenic
GAGGATAACATGCTGGACTT+GGG 0.533426 4_1:-87259978 None:intergenic
ATAGAAGTAATGAAAATACT+AGG 0.534541 4_1:+87261099 Msa0581760:CDS
CTCTCTGGGAATCCAGCCGT+TGG 0.535949 4_1:+87261319 Msa0581760:CDS
CAAGATACAAGACGCAAGAA+AGG 0.535955 4_1:+87259746 Msa0581760:CDS
TTATATAGGCCTTGGAAGGA+AGG 0.539594 4_1:+87262656 Msa0581760:intron
ATATACCATTCACCAACGGC+TGG 0.542162 4_1:-87261331 None:intergenic
TTTGTTAGGTGCCTAACTTG+AGG 0.545284 4_1:+87261585 Msa0581760:intron
CAAACATCTCCTTCCTTCCA+AGG 0.549364 4_1:-87262665 None:intergenic
CATGATCAGTTGTAAGAATG+TGG 0.551417 4_1:-87260508 None:intergenic
GATATTATATAGGCCTTGGA+AGG 0.554197 4_1:+87262652 Msa0581760:intron
GTTTCTTTGAGGAGGAACAC+TGG 0.554373 4_1:+87261657 Msa0581760:CDS
AGCAAATGATCTGGAGCTCT+AGG 0.556308 4_1:+87262767 Msa0581760:CDS
CGCAAGAAAGGAGAGTGAGA+TGG 0.559653 4_1:+87259758 Msa0581760:CDS
AGGTCTAAGATCTGTCAGTT+CGG 0.564884 4_1:+87260998 Msa0581760:CDS
CTAGTGAAATTGGAATGGTC+AGG 0.568231 4_1:+87263019 Msa0581760:three_prime_UTR
TTCTCTTAAGCATTGACCGG+AGG 0.575999 4_1:+87261141 Msa0581760:CDS
TCTCTTAAGCATTGACCGGA+GGG 0.576547 4_1:+87261142 Msa0581760:CDS
TCGATGTTATGATGCTTACT+GGG 0.579011 4_1:+87262835 Msa0581760:three_prime_UTR
ACATGCATGTTTCTTTGAGG+AGG 0.579495 4_1:+87261649 Msa0581760:CDS
ATTTATATTTGCGGATAACA+CGG 0.583351 4_1:+87262710 Msa0581760:CDS
TATTTGACCGCTTGAGATAG+GGG 0.583421 4_1:+87263143 Msa0581760:three_prime_UTR
TAAGGGACGCAACTAACTGC+TGG 0.589077 4_1:+87262865 Msa0581760:three_prime_UTR
ATGAGCATCAATTGATGGAA+CGG 0.591328 4_1:-87262068 None:intergenic
CTAGGTACAATGACGTACAT+GGG 0.594848 4_1:+87262785 Msa0581760:exon
AGTGGCTAGTGAAATTGGAA+TGG 0.597592 4_1:+87263014 Msa0581760:three_prime_UTR
TAGTAGACAATGAGTTAACA+AGG 0.599067 4_1:+87262893 Msa0581760:three_prime_UTR
TACAATGACGTACATGGGGA+TGG 0.600289 4_1:+87262790 Msa0581760:three_prime_UTR
TTAACTTTGATGAGCTCGTG+TGG 0.601630 4_1:+87259708 Msa0581760:five_prime_UTR
GTGGTGTATGTCAATTCCAA+AGG 0.611484 4_1:+87259782 Msa0581760:CDS
ATTTGACCGCTTGAGATAGG+GGG 0.614834 4_1:+87263144 Msa0581760:three_prime_UTR
GTCAGAGAATGTTGTATATG+TGG 0.621848 4_1:+87260818 Msa0581760:CDS
GTATTCGTTGGAGAGACTGG+TGG 0.624898 4_1:-87262529 None:intergenic
TGTAACTCTTCACTGTGGAG+AGG 0.625040 4_1:+87261489 Msa0581760:CDS
AGACGATCGTTCATTATCTG+AGG 0.628996 4_1:+87260463 Msa0581760:intron
TGACGTACATGGGGATGGTG+TGG 0.629757 4_1:+87262795 Msa0581760:three_prime_UTR
ATTTGAAACATACAGAAGTG+TGG 0.630716 4_1:-87259844 None:intergenic
TGAGTTAACAAGGTTGTTTG+GGG 0.635524 4_1:+87262903 Msa0581760:three_prime_UTR
AAAATAGGAAATGATAACAA+GGG 0.637400 4_1:+87263231 Msa0581760:three_prime_UTR
CATTGACCGGAGGGAGACAA+CGG 0.639400 4_1:+87261151 Msa0581760:CDS
GCTTACTGGGTATACAGTAA+GGG 0.640133 4_1:+87262848 Msa0581760:three_prime_UTR
TCTTACAACTGATCATGCGA+CGG 0.642944 4_1:+87260514 Msa0581760:CDS
ATTATTATGCCCATGCAACA+CGG 0.643033 4_1:+87263192 Msa0581760:three_prime_UTR
CAACGGCTGGATTCCCAGAG+AGG 0.647404 4_1:-87261318 None:intergenic
GAGTTAACAAGGTTGTTTGG+GGG 0.667687 4_1:+87262904 Msa0581760:three_prime_UTR
CACCTGAGTCATCAGTACAC+AGG 0.669280 4_1:-87262500 None:intergenic
GGAGTTGAGAACTACTCCAA+AGG 0.673352 4_1:+87260839 Msa0581760:CDS
AGTCTCTGATGGATCCATTG+AGG 0.676628 4_1:-87259821 None:intergenic
GTCCTGTGTACTGATGACTC+AGG 0.685762 4_1:+87262498 Msa0581760:CDS
AATGATATACCATTCACCAA+CGG 0.687223 4_1:-87261335 None:intergenic
TAGGTACAATGACGTACATG+GGG 0.693449 4_1:+87262786 Msa0581760:exon
CTTTATGTAACTCTTCACTG+TGG 0.703519 4_1:+87261484 Msa0581760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAATTAGTTTATAAATC+AGG + chr4_1:87262962-87262981 Msa0581760:three_prime_UTR 10.0%
!!! GGTTTAAATATAATTTTCTT+TGG - chr4_1:87260295-87260314 None:intergenic 15.0%
!! TTTAATTGTTTGGTTATTTA+CGG - chr4_1:87261813-87261832 None:intergenic 15.0%
!! TAAATAACCAAACAATTAAA+CGG + chr4_1:87261813-87261832 Msa0581760:intron 15.0%
!! GCATAATAATATCATTAATA+TGG - chr4_1:87263182-87263201 None:intergenic 15.0%
!!! AAAAGACCTTATTTAAAAAT+AGG + chr4_1:87263216-87263235 Msa0581760:three_prime_UTR 15.0%
!!! TCATTTCCTATTTTTAAATA+AGG - chr4_1:87263225-87263244 None:intergenic 15.0%
!!! TCAATCCAATATTTTTATCA+AGG - chr4_1:87259616-87259635 None:intergenic 20.0%
!!! TCTTTTTACTCCAAATTAAA+TGG + chr4_1:87260090-87260109 Msa0581760:intron 20.0%
!! TTATATTTAAACCATTGAGA+AGG + chr4_1:87260302-87260321 Msa0581760:intron 20.0%
!! TAATGCAAATGCAATAAATT+TGG - chr4_1:87260759-87260778 None:intergenic 20.0%
!! AATTTATTGCATTTGCATTA+TGG + chr4_1:87260759-87260778 Msa0581760:intron 20.0%
!!! ATATTTTCTTCACAAATTCA+TGG - chr4_1:87260907-87260926 None:intergenic 20.0%
!! ATAGAAGTAATGAAAATACT+AGG + chr4_1:87261099-87261118 Msa0581760:CDS 20.0%
!!! ATTTGAAGTAAATACTATAG+AGG - chr4_1:87261373-87261392 None:intergenic 20.0%
!!! TGACTCAAATTTTTTTTGTT+AGG + chr4_1:87261571-87261590 Msa0581760:intron 20.0%
!! TTTATCATTTATGTCACTAA+AGG - chr4_1:87261732-87261751 None:intergenic 20.0%
!! TTAATTGTTTGGTTATTTAC+GGG - chr4_1:87261812-87261831 None:intergenic 20.0%
!! AAAATTGACAAAATAAAGGT+TGG - chr4_1:87261850-87261869 None:intergenic 20.0%
!! CTTCAAAATTGACAAAATAA+AGG - chr4_1:87261854-87261873 None:intergenic 20.0%
!!! TTTTGAAGTTTTATTTGATC+TGG + chr4_1:87261866-87261885 Msa0581760:intron 20.0%
!!! TTTGAAGTTTTATTTGATCT+GGG + chr4_1:87261867-87261886 Msa0581760:intron 20.0%
!! GATATAGAATATATGTAACT+TGG - chr4_1:87261994-87262013 None:intergenic 20.0%
!!! GAAAAAATGTTTCTTCTTTT+TGG + chr4_1:87262218-87262237 Msa0581760:intron 20.0%
!! TAAACATAAAAAGTGAAAAC+GGG - chr4_1:87262275-87262294 None:intergenic 20.0%
!! GTAAACATAAAAAGTGAAAA+CGG - chr4_1:87262276-87262295 None:intergenic 20.0%
!!! TGTTGATTGTGATATTATAT+AGG + chr4_1:87262642-87262661 Msa0581760:intron 20.0%
!! ACTAAAGAATAGATTGAAAT+TGG + chr4_1:87262931-87262950 Msa0581760:three_prime_UTR 20.0%
!!! TTGATAATTCTCTCAAAAAA+AGG + chr4_1:87263073-87263092 Msa0581760:three_prime_UTR 20.0%
!! AAAAATAGGAAATGATAACA+AGG + chr4_1:87263230-87263249 Msa0581760:three_prime_UTR 20.0%
!! AAAATAGGAAATGATAACAA+GGG + chr4_1:87263231-87263250 Msa0581760:three_prime_UTR 20.0%
!!! CCAATATTTTTATCAAGGAT+GGG - chr4_1:87259611-87259630 None:intergenic 25.0%
!!! TCCAATATTTTTATCAAGGA+TGG - chr4_1:87259612-87259631 None:intergenic 25.0%
!! AAAAGTAAAATTGAGAGTGT+TGG - chr4_1:87259894-87259913 None:intergenic 25.0%
! GTGATATACTGTAAAAGAAA+CGG - chr4_1:87260040-87260059 None:intergenic 25.0%
!! TTTGGAGTAAAAAGAAATGT+TGG - chr4_1:87260085-87260104 None:intergenic 25.0%
! TAAATACAGGCCATTTAATT+TGG - chr4_1:87260103-87260122 None:intergenic 25.0%
! TAAATGCTGGTAATAAATAC+AGG - chr4_1:87260116-87260135 None:intergenic 25.0%
! AATTTCTCTCTAATAAATGC+TGG - chr4_1:87260129-87260148 None:intergenic 25.0%
! AATACAATAACTAGAGATAG+AGG + chr4_1:87260265-87260284 Msa0581760:intron 25.0%
! ATACAATAACTAGAGATAGA+GGG + chr4_1:87260266-87260285 Msa0581760:intron 25.0%
! TTAATACATGACAGAATGTT+AGG + chr4_1:87260354-87260373 Msa0581760:intron 25.0%
! TAATACATGACAGAATGTTA+GGG + chr4_1:87260355-87260374 Msa0581760:intron 25.0%
! ATGAATAAAATACTGACAGT+AGG - chr4_1:87260736-87260755 None:intergenic 25.0%
! CTAGGAAAAAAATCTTTGTT+AGG + chr4_1:87261117-87261136 Msa0581760:CDS 25.0%
! AGTGTAATACACAAATCATT+TGG + chr4_1:87261194-87261213 Msa0581760:intron 25.0%
! GTGTAATACACAAATCATTT+GGG + chr4_1:87261195-87261214 Msa0581760:intron 25.0%
! TAAATACTATAGAGGAATCT+AGG - chr4_1:87261365-87261384 None:intergenic 25.0%
! TAACTTGGCAGTTAATAAAT+TGG - chr4_1:87261979-87261998 None:intergenic 25.0%
!! ATATCATCTTCACAATTTTC+AGG + chr4_1:87262009-87262028 Msa0581760:intron 25.0%
! TTTGTTTGACATCAAACATT+AGG + chr4_1:87262038-87262057 Msa0581760:CDS 25.0%
! TGTATATTAGACTTTGATCA+AGG + chr4_1:87262398-87262417 Msa0581760:intron 25.0%
! TGCTGTTGAATTTATATTTG+CGG + chr4_1:87262701-87262720 Msa0581760:CDS 25.0%
! ATTTATATTTGCGGATAACA+CGG + chr4_1:87262710-87262729 Msa0581760:CDS 25.0%
! TTATAAATCAGGCATTTAAC+TGG + chr4_1:87262973-87262992 Msa0581760:three_prime_UTR 25.0%
! TTCTTAACAAGTTCTCTTAA+GGG - chr4_1:87263257-87263276 None:intergenic 25.0%
CCCATCCTTGATAAAAATAT+TGG + chr4_1:87259608-87259627 Msa0581760:five_prime_UTR 30.0%
! AATATTGGATTGAGAAGCAT+AGG + chr4_1:87259623-87259642 Msa0581760:five_prime_UTR 30.0%
! ATTTGAAACATACAGAAGTG+TGG - chr4_1:87259847-87259866 None:intergenic 30.0%
!! AAATTGAGAGTGTTGGAAAA+CGG - chr4_1:87259887-87259906 None:intergenic 30.0%
! AAGGGAAATACATACTTTTG+AGG - chr4_1:87260000-87260019 None:intergenic 30.0%
ACACGATTACTCCAAATTTA+GGG + chr4_1:87260058-87260077 Msa0581760:intron 30.0%
AGGTGCTAGAATATCATATT+AGG + chr4_1:87260177-87260196 Msa0581760:intron 30.0%
TGCTAGAATATCATATTAGG+TGG + chr4_1:87260180-87260199 Msa0581760:intron 30.0%
GTAAGAATAGTAGTCTAGAT+GGG + chr4_1:87260239-87260258 Msa0581760:intron 30.0%
TAAGAATAGTAGTCTAGATG+GGG + chr4_1:87260240-87260259 Msa0581760:intron 30.0%
TAATCAAGCGGAAAATACTT+GGG - chr4_1:87260710-87260729 None:intergenic 30.0%
ATGCAGAAAAATGAATCCAA+AGG + chr4_1:87260939-87260958 Msa0581760:intron 30.0%
TATATTGAAGCTGTACTTGA+AGG + chr4_1:87260978-87260997 Msa0581760:CDS 30.0%
! TTTTTAATCTCTTCGCTGAA+AGG - chr4_1:87261041-87261060 None:intergenic 30.0%
AAATCATTTGGGCAAACTTA+AGG + chr4_1:87261206-87261225 Msa0581760:intron 30.0%
CAAAGAAGCAGATTATTCAA+AGG - chr4_1:87261245-87261264 None:intergenic 30.0%
AATGATATACCATTCACCAA+CGG - chr4_1:87261338-87261357 None:intergenic 30.0%
!! TTTTATTTGATCTGGGAAAG+TGG + chr4_1:87261874-87261893 Msa0581760:intron 30.0%
AAATGATGAGCATCAATTGA+TGG - chr4_1:87262076-87262095 None:intergenic 30.0%
! TCAATTGATGCTCATCATTT+TGG + chr4_1:87262076-87262095 Msa0581760:CDS 30.0%
ATGAAGTTGAGAATACAATG+AGG - chr4_1:87262161-87262180 None:intergenic 30.0%
!!! TCGAGATTTTAGAGTAGAAA+TGG + chr4_1:87262181-87262200 Msa0581760:intron 30.0%
! GATGAGAAATTGTACTTTTC+TGG - chr4_1:87262338-87262357 None:intergenic 30.0%
! AAAATTGCTGCTTCTTCATT+TGG + chr4_1:87262552-87262571 Msa0581760:CDS 30.0%
TTGTGATATTATATAGGCCT+TGG + chr4_1:87262648-87262667 Msa0581760:intron 30.0%
TAGTAGACAATGAGTTAACA+AGG + chr4_1:87262893-87262912 Msa0581760:three_prime_UTR 30.0%
AATGAGTTAACAAGGTTGTT+TGG + chr4_1:87262901-87262920 Msa0581760:three_prime_UTR 30.0%
ATGAGTTAACAAGGTTGTTT+GGG + chr4_1:87262902-87262921 Msa0581760:three_prime_UTR 30.0%
! AAAGGTATGTGTTGATAAAG+TGG + chr4_1:87263091-87263110 Msa0581760:three_prime_UTR 30.0%
CTTCTTAACAAGTTCTCTTA+AGG - chr4_1:87263258-87263277 None:intergenic 30.0%
!! CTTAAGAGAACTTGTTAAGA+AGG + chr4_1:87263256-87263275 Msa0581760:three_prime_UTR 30.0%
!! AATTGAGAGTGTTGGAAAAC+GGG - chr4_1:87259886-87259905 None:intergenic 35.0%
!! TACTTTTGAGGATAACATGC+TGG - chr4_1:87259988-87260007 None:intergenic 35.0%
GTAAAAGAGTGAGAATGGAA+GGG - chr4_1:87260018-87260037 None:intergenic 35.0%
AAACGGTAAAAGAGTGAGAA+TGG - chr4_1:87260023-87260042 None:intergenic 35.0%
CACACGATTACTCCAAATTT+AGG + chr4_1:87260057-87260076 Msa0581760:intron 35.0%
GAAATGTTGGTCCCTAAATT+TGG - chr4_1:87260072-87260091 None:intergenic 35.0%
AAATTAGATAGCCCATGTAG+TGG + chr4_1:87260144-87260163 Msa0581760:intron 35.0%
!! TAAGAGATTTGTTGAAGCAG+CGG + chr4_1:87260217-87260236 Msa0581760:intron 35.0%
GGTAAGAATAGTAGTCTAGA+TGG + chr4_1:87260238-87260257 Msa0581760:intron 35.0%
TGCTTCTAAATCCTTCTCAA+TGG - chr4_1:87260316-87260335 None:intergenic 35.0%
GAGAAGGATTTAGAAGCAAA+TGG + chr4_1:87260318-87260337 Msa0581760:intron 35.0%
! CGGTTGAGTCTTTTTACATT+AGG - chr4_1:87260409-87260428 None:intergenic 35.0%
ATAACCAACGTTAGCAAAAG+CGG - chr4_1:87260429-87260448 None:intergenic 35.0%
CATGATCAGTTGTAAGAATG+TGG - chr4_1:87260511-87260530 None:intergenic 35.0%
CTAATCAAGCGGAAAATACT+TGG - chr4_1:87260711-87260730 None:intergenic 35.0%
TGGTAGCAACTTCTATATAC+AGG + chr4_1:87260779-87260798 Msa0581760:intron 35.0%
GTCAGAGAATGTTGTATATG+TGG + chr4_1:87260818-87260837 Msa0581760:CDS 35.0%
ACTACTCCAAAGGTAAAGAA+AGG + chr4_1:87260849-87260868 Msa0581760:intron 35.0%
TGAGATCCTTTCTTTACCTT+TGG - chr4_1:87260858-87260877 None:intergenic 35.0%
! ATAATCTGCTTCTTTGCTGT+AGG + chr4_1:87261249-87261268 Msa0581760:intron 35.0%
!! CATTGGAAATGAGGCATTTT+GGG + chr4_1:87261281-87261300 Msa0581760:CDS 35.0%
!! ATTGGAAATGAGGCATTTTG+GGG + chr4_1:87261282-87261301 Msa0581760:CDS 35.0%
ATTCCTGGTTTATCATTTGC+AGG + chr4_1:87261419-87261438 Msa0581760:intron 35.0%
TTCCTGGTTTATCATTTGCA+GGG + chr4_1:87261420-87261439 Msa0581760:intron 35.0%
! ACTAAAATTTGCTCGAGAAC+AGG + chr4_1:87261459-87261478 Msa0581760:CDS 35.0%
! CTAAAATTTGCTCGAGAACA+GGG + chr4_1:87261460-87261479 Msa0581760:CDS 35.0%
CTTTATGTAACTCTTCACTG+TGG + chr4_1:87261484-87261503 Msa0581760:CDS 35.0%
AGTGAAACAACACTAGTAAC+AGG - chr4_1:87261535-87261554 None:intergenic 35.0%
!! TGTTACTAGTGTTGTTTCAC+TGG + chr4_1:87261534-87261553 Msa0581760:intron 35.0%
! GCTGAAATCGTCTAAAATTC+CGG + chr4_1:87261685-87261704 Msa0581760:CDS 35.0%
ATTCAACTTGCAAGTCTAAC+CGG - chr4_1:87261707-87261726 None:intergenic 35.0%
! GTGATGTACTGTGATTTGTA+TGG + chr4_1:87261768-87261787 Msa0581760:intron 35.0%
ACGGGTAAAAATTCTTCTTG+TGG - chr4_1:87261794-87261813 None:intergenic 35.0%
TGCAGAACCGTTTAATTGTT+TGG - chr4_1:87261823-87261842 None:intergenic 35.0%
TCTCATTTCTACTGATCATC+CGG + chr4_1:87261915-87261934 Msa0581760:intron 35.0%
ATGAGCATCAATTGATGGAA+CGG - chr4_1:87262071-87262090 None:intergenic 35.0%
!! TTGATGCTCATCATTTTGGT+AGG + chr4_1:87262080-87262099 Msa0581760:intron 35.0%
!! GAGGAAATTTAGCTTGAAGA+GGG - chr4_1:87262298-87262317 None:intergenic 35.0%
!! AGAGGAAATTTAGCTTGAAG+AGG - chr4_1:87262299-87262318 None:intergenic 35.0%
TGAGTAGAATGACATCAGAA+GGG - chr4_1:87262376-87262395 None:intergenic 35.0%
TTGAGTAGAATGACATCAGA+AGG - chr4_1:87262377-87262396 None:intergenic 35.0%
! AGCAGCAATTTTGTATTCGT+TGG - chr4_1:87262544-87262563 None:intergenic 35.0%
GATATTATATAGGCCTTGGA+AGG + chr4_1:87262652-87262671 Msa0581760:intron 35.0%
TAGTTTAGCAGCAAATGATC+TGG + chr4_1:87262758-87262777 Msa0581760:CDS 35.0%
TTCGATGTTATGATGCTTAC+TGG + chr4_1:87262834-87262853 Msa0581760:three_prime_UTR 35.0%
TCGATGTTATGATGCTTACT+GGG + chr4_1:87262835-87262854 Msa0581760:three_prime_UTR 35.0%
TGAGTTAACAAGGTTGTTTG+GGG + chr4_1:87262903-87262922 Msa0581760:three_prime_UTR 35.0%
!! AGGTCAAGTGAAGTCATTTT+GGG + chr4_1:87263044-87263063 Msa0581760:three_prime_UTR 35.0%
CAAGCGGTCAAATATAACTT+TGG - chr4_1:87263137-87263156 None:intergenic 35.0%
TATATTTGACCGCTTGAGAT+AGG + chr4_1:87263141-87263160 Msa0581760:three_prime_UTR 35.0%
ATATTTGACCGCTTGAGATA+GGG + chr4_1:87263142-87263161 Msa0581760:three_prime_UTR 35.0%
ATTATTATGCCCATGCAACA+CGG + chr4_1:87263192-87263211 Msa0581760:three_prime_UTR 35.0%
TTAACTTTGATGAGCTCGTG+TGG + chr4_1:87259708-87259727 Msa0581760:five_prime_UTR 40.0%
CTTTCTTGCGTCTTGTATCT+TGG - chr4_1:87259748-87259767 None:intergenic 40.0%
CAAGATACAAGACGCAAGAA+AGG + chr4_1:87259746-87259765 Msa0581760:CDS 40.0%
GTGGTGTATGTCAATTCCAA+AGG + chr4_1:87259782-87259801 Msa0581760:CDS 40.0%
TGAGCATGCAATTCTACCTT+TGG - chr4_1:87259801-87259820 None:intergenic 40.0%
!! ATTGAGAGTGTTGGAAAACG+GGG - chr4_1:87259885-87259904 None:intergenic 40.0%
AAACCTTTAGCAAGTTCGCT+GGG - chr4_1:87259932-87259951 None:intergenic 40.0%
!! AGCGAACTTGCTAAAGGTTT+GGG + chr4_1:87259932-87259951 Msa0581760:intron 40.0%
TGCTAAAGGTTTGGGTGATA+AGG + chr4_1:87259940-87259959 Msa0581760:CDS 40.0%
GCTAAAGGTTTGGGTGATAA+GGG + chr4_1:87259941-87259960 Msa0581760:CDS 40.0%
GGTAAAAGAGTGAGAATGGA+AGG - chr4_1:87260019-87260038 None:intergenic 40.0%
!! GCTTTTGCTAACGTTGGTTA+TGG + chr4_1:87260428-87260447 Msa0581760:intron 40.0%
AGACGATCGTTCATTATCTG+AGG + chr4_1:87260463-87260482 Msa0581760:intron 40.0%
TCTTACAACTGATCATGCGA+CGG + chr4_1:87260514-87260533 Msa0581760:CDS 40.0%
AAGTATGTCTGACAGCACTT+GGG + chr4_1:87260555-87260574 Msa0581760:intron 40.0%
TGTCACCGTGACATTAAATC+TGG + chr4_1:87260586-87260605 Msa0581760:intron 40.0%
GTCACCGTGACATTAAATCT+GGG + chr4_1:87260587-87260606 Msa0581760:intron 40.0%
CATCCATGAGTACATTTGTG+TGG + chr4_1:87260652-87260671 Msa0581760:intron 40.0%
GTCACCGTGACATTAAATCT+GGG - chr4_1:87260587-87260606 None:intergenic 40.0%
TGTCACCGTGACATTAAATC+TGG - chr4_1:87260586-87260605 None:intergenic 40.0%
CTTCACAAATTCATGGACAC+AGG - chr4_1:87260900-87260919 None:intergenic 40.0%
! AGGTCTAAGATCTGTCAGTT+CGG + chr4_1:87260998-87261017 Msa0581760:CDS 40.0%
! CTGAGAGTATAGGGTTTGAA+TGG - chr4_1:87261064-87261083 None:intergenic 40.0%
! TAGCTGAGACTGAGAGTATA+GGG - chr4_1:87261073-87261092 None:intergenic 40.0%
TCATGCTTGCATTGGAAATG+AGG + chr4_1:87261272-87261291 Msa0581760:CDS 40.0%
!! GCATTGGAAATGAGGCATTT+TGG + chr4_1:87261280-87261299 Msa0581760:CDS 40.0%
TTGTTGGAATTGACCTCTCT+GGG + chr4_1:87261305-87261324 Msa0581760:CDS 40.0%
ATGCTTGAGCTCAAAATTCC+TGG + chr4_1:87261404-87261423 Msa0581760:intron 40.0%
AACCCTGCAAATGATAAACC+AGG - chr4_1:87261425-87261444 None:intergenic 40.0%
!! TCTCGAGCAAATTTTAGTGC+TGG - chr4_1:87261457-87261476 None:intergenic 40.0%
ACAACACTAGTAACAGGTAC+AGG - chr4_1:87261529-87261548 None:intergenic 40.0%
TTTGTTAGGTGCCTAACTTG+AGG + chr4_1:87261585-87261604 Msa0581760:intron 40.0%
TTGTTAGGTGCCTAACTTGA+GGG + chr4_1:87261586-87261605 Msa0581760:intron 40.0%
TCATGTATCTCCCTCAAGTT+AGG - chr4_1:87261599-87261618 None:intergenic 40.0%
TGCTTGACTTTCTTCCTGAA+AGG + chr4_1:87261621-87261640 Msa0581760:CDS 40.0%
GACTTTCTTCCTGAAAGGAT+TGG + chr4_1:87261626-87261645 Msa0581760:CDS 40.0%
TGGACATGCATGTTTCTTTG+AGG + chr4_1:87261646-87261665 Msa0581760:CDS 40.0%
! ACATGCATGTTTCTTTGAGG+AGG + chr4_1:87261649-87261668 Msa0581760:CDS 40.0%
AAGCATTCAAACTTAGCCAC+CGG - chr4_1:87261937-87261956 None:intergenic 40.0%
!!! TGTACTTTTCTGGTTCTGTG+AGG - chr4_1:87262328-87262347 None:intergenic 40.0%
AGTAGAATGACATCAGAAGG+GGG - chr4_1:87262374-87262393 None:intergenic 40.0%
GAGTAGAATGACATCAGAAG+GGG - chr4_1:87262375-87262394 None:intergenic 40.0%
! TCATGCTTTTGTTGATGCAG+TGG + chr4_1:87262449-87262468 Msa0581760:intron 40.0%
TTTGTATTCGTTGGAGAGAC+TGG - chr4_1:87262535-87262554 None:intergenic 40.0%
TTATATAGGCCTTGGAAGGA+AGG + chr4_1:87262656-87262675 Msa0581760:intron 40.0%
TCTAGGTACAATGACGTACA+TGG + chr4_1:87262784-87262803 Msa0581760:exon 40.0%
CTAGGTACAATGACGTACAT+GGG + chr4_1:87262785-87262804 Msa0581760:exon 40.0%
TAGGTACAATGACGTACATG+GGG + chr4_1:87262786-87262805 Msa0581760:exon 40.0%
GATGGTGTGGATGTGTATTT+AGG + chr4_1:87262808-87262827 Msa0581760:three_prime_UTR 40.0%
TGCTTACTGGGTATACAGTA+AGG + chr4_1:87262847-87262866 Msa0581760:three_prime_UTR 40.0%
GCTTACTGGGTATACAGTAA+GGG + chr4_1:87262848-87262867 Msa0581760:three_prime_UTR 40.0%
GAGTTAACAAGGTTGTTTGG+GGG + chr4_1:87262904-87262923 Msa0581760:three_prime_UTR 40.0%
GCATTTAACTGGACTGTTCT+TGG + chr4_1:87262984-87263003 Msa0581760:three_prime_UTR 40.0%
TTTAACTGGACTGTTCTTGG+AGG + chr4_1:87262987-87263006 Msa0581760:three_prime_UTR 40.0%
GTTTCAGTGGCTAGTGAAAT+TGG + chr4_1:87263009-87263028 Msa0581760:three_prime_UTR 40.0%
AGTGGCTAGTGAAATTGGAA+TGG + chr4_1:87263014-87263033 Msa0581760:three_prime_UTR 40.0%
CTAGTGAAATTGGAATGGTC+AGG + chr4_1:87263019-87263038 Msa0581760:three_prime_UTR 40.0%
! CAGGTCAAGTGAAGTCATTT+TGG + chr4_1:87263043-87263062 Msa0581760:three_prime_UTR 40.0%
TATTTGACCGCTTGAGATAG+GGG + chr4_1:87263143-87263162 Msa0581760:three_prime_UTR 40.0%
GAATTGCATGCTCACCTCAA+TGG + chr4_1:87259807-87259826 Msa0581760:CDS 45.0%
! AGTCTCTGATGGATCCATTG+AGG - chr4_1:87259824-87259843 None:intergenic 45.0%
!! TTTCCCAGCGAACTTGCTAA+AGG + chr4_1:87259926-87259945 Msa0581760:intron 45.0%
CAAACCTTTAGCAAGTTCGC+TGG - chr4_1:87259933-87259952 None:intergenic 45.0%
!! CAGCGAACTTGCTAAAGGTT+TGG + chr4_1:87259931-87259950 Msa0581760:intron 45.0%
GAGGATAACATGCTGGACTT+GGG - chr4_1:87259981-87260000 None:intergenic 45.0%
TGAGGATAACATGCTGGACT+TGG - chr4_1:87259982-87260001 None:intergenic 45.0%
TTCTCCAGTCTCCACTACAT+GGG - chr4_1:87260158-87260177 None:intergenic 45.0%
ATTAGGTGCGATCTTCTGCT+TGG - chr4_1:87260392-87260411 None:intergenic 45.0%
!! TCAACCGCTTTTGCTAACGT+TGG + chr4_1:87260422-87260441 Msa0581760:intron 45.0%
GAAGTATGTCTGACAGCACT+TGG + chr4_1:87260554-87260573 Msa0581760:intron 45.0%
GTGGCCCAGATTTAATGTCA+CGG - chr4_1:87260671-87260690 None:intergenic 45.0%
AAACGGCAATGTGTGTTGTG+TGG - chr4_1:87260613-87260632 None:intergenic 45.0%
! ACACATTGCCGTTTGCATCT+GGG + chr4_1:87260619-87260638 Msa0581760:intron 45.0%
GTACTCATGGATGTGTTGTG+TGG - chr4_1:87260645-87260664 None:intergenic 45.0%
GTGGCCCAGATTTAATGTCA+CGG + chr4_1:87260671-87260690 Msa0581760:intron 45.0%
GACAGTAGGCACTAATCAAG+CGG - chr4_1:87260722-87260741 None:intergenic 45.0%
GGAGTTGAGAACTACTCCAA+AGG + chr4_1:87260839-87260858 Msa0581760:CDS 45.0%
! AGAGCGTTTGCTCATTCCTT+TGG - chr4_1:87260958-87260977 None:intergenic 45.0%
ATCTGTCAGTTCGGTTGATC+TGG + chr4_1:87261007-87261026 Msa0581760:CDS 45.0%
TCTGTCAGTTCGGTTGATCT+GGG + chr4_1:87261008-87261027 Msa0581760:CDS 45.0%
! GTAGCTGAGACTGAGAGTAT+AGG - chr4_1:87261074-87261093 None:intergenic 45.0%
!! GGCTTCTCTTAAGCATTGAC+CGG + chr4_1:87261138-87261157 Msa0581760:CDS 45.0%
!! TTCTCTTAAGCATTGACCGG+AGG + chr4_1:87261141-87261160 Msa0581760:CDS 45.0%
!! TCTCTTAAGCATTGACCGGA+GGG + chr4_1:87261142-87261161 Msa0581760:CDS 45.0%
!!! ATGAGGCATTTTGGGGTTGT+TGG + chr4_1:87261289-87261308 Msa0581760:CDS 45.0%
GTTGTTGGAATTGACCTCTC+TGG + chr4_1:87261304-87261323 Msa0581760:CDS 45.0%
ATATACCATTCACCAACGGC+TGG - chr4_1:87261334-87261353 None:intergenic 45.0%
TGTAACTCTTCACTGTGGAG+AGG + chr4_1:87261489-87261508 Msa0581760:CDS 45.0%
!! ACTAGTGTTGTTTCACTGGC+AGG + chr4_1:87261538-87261557 Msa0581760:intron 45.0%
CATGCATGTCCAATCCTTTC+AGG - chr4_1:87261638-87261657 None:intergenic 45.0%
! GTTTCTTTGAGGAGGAACAC+TGG + chr4_1:87261657-87261676 Msa0581760:CDS 45.0%
CATTTCTACTGATCATCCGG+TGG + chr4_1:87261918-87261937 Msa0581760:intron 45.0%
GGTTCTGTGAGGTTCTTTAG+AGG - chr4_1:87262317-87262336 None:intergenic 45.0%
GTAGAATGACATCAGAAGGG+GGG - chr4_1:87262373-87262392 None:intergenic 45.0%
TCATCAGTACACAGGACTAC+AGG - chr4_1:87262495-87262514 None:intergenic 45.0%
CAAACATCTCCTTCCTTCCA+AGG - chr4_1:87262668-87262687 None:intergenic 45.0%
! AGCAAATGATCTGGAGCTCT+AGG + chr4_1:87262767-87262786 Msa0581760:CDS 45.0%
TACAATGACGTACATGGGGA+TGG + chr4_1:87262790-87262809 Msa0581760:three_prime_UTR 45.0%
TTAACAAGGTTGTTTGGGGG+TGG + chr4_1:87262907-87262926 Msa0581760:three_prime_UTR 45.0%
ACTGTTCTTGGAGGTTTCAG+TGG + chr4_1:87262996-87263015 Msa0581760:three_prime_UTR 45.0%
GAAATTGGAATGGTCAGGTC+AGG + chr4_1:87263024-87263043 Msa0581760:three_prime_UTR 45.0%
ATTTGACCGCTTGAGATAGG+GGG + chr4_1:87263144-87263163 Msa0581760:three_prime_UTR 45.0%
CGCAAGAAAGGAGAGTGAGA+TGG + chr4_1:87259758-87259777 Msa0581760:CDS 50.0%
GAAAGGAGAGTGAGATGGAG+TGG + chr4_1:87259763-87259782 Msa0581760:CDS 50.0%
! CAGAAGTGTGGAGTCTCTGA+TGG - chr4_1:87259835-87259854 None:intergenic 50.0%
! ATAGCCCATGTAGTGGAGAC+TGG + chr4_1:87260151-87260170 Msa0581760:intron 50.0%
CTTCTCCAGTCTCCACTACA+TGG - chr4_1:87260159-87260178 None:intergenic 50.0%
! CATGTAGTGGAGACTGGAGA+AGG + chr4_1:87260157-87260176 Msa0581760:intron 50.0%
! CACACATTGCCGTTTGCATC+TGG + chr4_1:87260618-87260637 Msa0581760:intron 50.0%
TTGTGTGGCCCAGATGCAAA+CGG - chr4_1:87260630-87260649 None:intergenic 50.0%
GGGCCACACAAATGTACTCA+TGG - chr4_1:87260658-87260677 None:intergenic 50.0%
GCTGTAGGTCATGCTTGCAT+TGG + chr4_1:87261264-87261283 Msa0581760:intron 50.0%
TTGAGGAGGAACACTGGAGA+AGG + chr4_1:87261663-87261682 Msa0581760:CDS 50.0%
! GTCCTGTGTACTGATGACTC+AGG + chr4_1:87262498-87262517 Msa0581760:CDS 50.0%
CACCTGAGTCATCAGTACAC+AGG - chr4_1:87262503-87262522 None:intergenic 50.0%
GTATTCGTTGGAGAGACTGG+TGG - chr4_1:87262532-87262551 None:intergenic 50.0%
TGCGGATAACACGGCAAAAG+AGG + chr4_1:87262719-87262738 Msa0581760:CDS 50.0%
TAAGGGACGCAACTAACTGC+TGG + chr4_1:87262865-87262884 Msa0581760:three_prime_UTR 50.0%
! GGTCTTTTGCCGTGTTGCAT+GGG - chr4_1:87263204-87263223 None:intergenic 50.0%
! AGGTCTTTTGCCGTGTTGCA+TGG - chr4_1:87263205-87263224 None:intergenic 50.0%
CATTGACCGGAGGGAGACAA+CGG + chr4_1:87261151-87261170 Msa0581760:CDS 55.0%
GGAGACAACGGAAGCAGCAA+TGG + chr4_1:87261163-87261182 Msa0581760:CDS 55.0%
! GGAATCCAGCCGTTGGTGAA+TGG + chr4_1:87261326-87261345 Msa0581760:CDS 55.0%
TGACGTACATGGGGATGGTG+TGG + chr4_1:87262795-87262814 Msa0581760:three_prime_UTR 55.0%
TCCTAGCCCCCTATCTCAAG+CGG - chr4_1:87263153-87263172 None:intergenic 55.0%
CTGCTTCCGTTGTCTCCCTC+CGG - chr4_1:87261160-87261179 None:intergenic 60.0%
CAACGGCTGGATTCCCAGAG+AGG - chr4_1:87261321-87261340 None:intergenic 60.0%
! CTCTCTGGGAATCCAGCCGT+TGG + chr4_1:87261319-87261338 Msa0581760:CDS 60.0%
ACCGCTTGAGATAGGGGGCT+AGG + chr4_1:87263149-87263168 Msa0581760:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 87259596 87263323 87259596 ID=Msa0581760;Name=Msa0581760
chr4_1 mRNA 87259596 87263323 87259596 ID=Msa0581760-mRNA-1;Parent=Msa0581760;Name=Msa0581760-mRNA-1;_AED=0.16;_eAED=0.16;_QI=145|1|1|1|1|1|11|535|379
chr4_1 exon 87259596 87259853 87259596 ID=Msa0581760-mRNA-1:exon:32401;Parent=Msa0581760-mRNA-1
chr4_1 exon 87259934 87260004 87259934 ID=Msa0581760-mRNA-1:exon:32402;Parent=Msa0581760-mRNA-1
chr4_1 exon 87260465 87260556 87260465 ID=Msa0581760-mRNA-1:exon:32403;Parent=Msa0581760-mRNA-1
chr4_1 exon 87260801 87260860 87260801 ID=Msa0581760-mRNA-1:exon:32404;Parent=Msa0581760-mRNA-1
chr4_1 exon 87260945 87261190 87260945 ID=Msa0581760-mRNA-1:exon:32405;Parent=Msa0581760-mRNA-1
chr4_1 exon 87261271 87261347 87261271 ID=Msa0581760-mRNA-1:exon:32406;Parent=Msa0581760-mRNA-1
chr4_1 exon 87261441 87261510 87261441 ID=Msa0581760-mRNA-1:exon:32407;Parent=Msa0581760-mRNA-1
chr4_1 exon 87261593 87261706 87261593 ID=Msa0581760-mRNA-1:exon:32408;Parent=Msa0581760-mRNA-1
chr4_1 exon 87262031 87262097 87262031 ID=Msa0581760-mRNA-1:exon:32409;Parent=Msa0581760-mRNA-1
chr4_1 exon 87262469 87262573 87262469 ID=Msa0581760-mRNA-1:exon:32410;Parent=Msa0581760-mRNA-1
chr4_1 exon 87262664 87263323 87262664 ID=Msa0581760-mRNA-1:exon:32411;Parent=Msa0581760-mRNA-1
chr4_1 five_prime_UTR 87259596 87259740 87259596 ID=Msa0581760-mRNA-1:five_prime_utr;Parent=Msa0581760-mRNA-1
chr4_1 CDS 87259741 87259853 87259741 ID=Msa0581760-mRNA-1:cds;Parent=Msa0581760-mRNA-1
chr4_1 CDS 87259934 87260004 87259934 ID=Msa0581760-mRNA-1:cds;Parent=Msa0581760-mRNA-1
chr4_1 CDS 87260465 87260556 87260465 ID=Msa0581760-mRNA-1:cds;Parent=Msa0581760-mRNA-1
chr4_1 CDS 87260801 87260860 87260801 ID=Msa0581760-mRNA-1:cds;Parent=Msa0581760-mRNA-1
chr4_1 CDS 87260945 87261190 87260945 ID=Msa0581760-mRNA-1:cds;Parent=Msa0581760-mRNA-1
chr4_1 CDS 87261271 87261347 87261271 ID=Msa0581760-mRNA-1:cds;Parent=Msa0581760-mRNA-1
chr4_1 CDS 87261441 87261510 87261441 ID=Msa0581760-mRNA-1:cds;Parent=Msa0581760-mRNA-1
chr4_1 CDS 87261593 87261706 87261593 ID=Msa0581760-mRNA-1:cds;Parent=Msa0581760-mRNA-1
chr4_1 CDS 87262031 87262097 87262031 ID=Msa0581760-mRNA-1:cds;Parent=Msa0581760-mRNA-1
chr4_1 CDS 87262469 87262573 87262469 ID=Msa0581760-mRNA-1:cds;Parent=Msa0581760-mRNA-1
chr4_1 CDS 87262664 87262788 87262664 ID=Msa0581760-mRNA-1:cds;Parent=Msa0581760-mRNA-1
chr4_1 three_prime_UTR 87262789 87263323 87262789 ID=Msa0581760-mRNA-1:three_prime_utr;Parent=Msa0581760-mRNA-1
Gene Sequence

>Msa0581760

ATGACCAAGATACAAGACGCAAGAAAGGAGAGTGAGATGGAGTGGTGTATGTCAATTCCAAAGGTAGAATTGCATGCTCACCTCAATGGATCCATCAGAGACTCCACACTTCTCGAACTTGCTAAAGGTTTGGGTGATAAGGGTCTCATTGATTTCTCCCAAGTCCAGCATGTTATCCTCAAAAACGATCGTTCATTATCTGAGGTATTCAAGCTGTTTGACGTAATCCACATTCTTACAACTGATCATGCGACGGTTACAAGAATTACGAAAGAAGTTGTTGAAGATTTTGCGTCAGAGAATGTTGTATATGTGGAGTTGAGAACTACTCCAAAGAAAAATGAATCCAAAGGAATGAGCAAACGCTCTTATATTGAAGCTGTACTTGAAGGTCTAAGATCTGTCAGTTCGGTTGATCTGGGTTTTATTCCTTTCAGCGAAGAGATTAAAAACCATTCAAACCCTATACTCTCAGTCTCAGCTACAGATGATAGAAGTAATGAAAATACTAGGAAAAAAATCTTTGTTAGGCTTCTCTTAAGCATTGACCGGAGGGAGACAACGGAAGCAGCAATGGAAACTGTCATGCTTGCATTGGAAATGAGGCATTTTGGGGTTGTTGGAATTGACCTCTCTGGGAATCCAGCCGTTGGTGAATGGGTTACATATTTGCCAGCACTAAAATTTGCTCGAGAACAGGGTCTTTATGTAACTCTTCACTGTGGAGAGGTGCCTAACTTGAGGGAGATACATGATATGCTTGACTTTCTTCCTGAAAGGATTGGACATGCATGTTTCTTTGAGGAGGAACACTGGAGAAGGCTGAAATCGTCTAAAATTCCGGTTGAACTTTGTTTGACATCAAACATTAGGACATTGTCCGTTCCATCAATTGATGCTCATCATTTTGTGGATTTGTATAATGCAAAACATCCTGTAGTCCTGTGTACTGATGACTCAGGTGTGTTCTCCACCAGTCTCTCCAACGAATACAAAATTGCTGCTTCTTCATTTGGCCTTGGAAGGAAGGAGATGTTTGAGCTATCAAAGAATGCTGTTGAATTTATATTTGCGGATAACACGGCAAAAGAGGATTTAAGAAATATTTTTAGTTTAGCAGCAAATGATCTGGAGCTCTAG

Protein sequence

>Msa0581760

MTKIQDARKESEMEWCMSIPKVELHAHLNGSIRDSTLLELAKGLGDKGLIDFSQVQHVILKNDRSLSEVFKLFDVIHILTTDHATVTRITKEVVEDFASENVVYVELRTTPKKNESKGMSKRSYIEAVLEGLRSVSSVDLGFIPFSEEIKNHSNPILSVSATDDRSNENTRKKIFVRLLLSIDRRETTEAAMETVMLALEMRHFGVVGIDLSGNPAVGEWVTYLPALKFAREQGLYVTLHCGEVPNLREIHDMLDFLPERIGHACFFEEEHWRRLKSSKIPVELCLTSNIRTLSVPSIDAHHFVDLYNAKHPVVLCTDDSGVFSTSLSNEYKIAASSFGLGRKEMFELSKNAVEFIFADNTAKEDLRNIFSLAANDLEL*