Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388360 | XP_003592554.2 | 98.750 | 560 | 7 | 0 | 1 | 560 | 1 | 560 | 0.0 | 1138 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388360 | G7IAT4 | 98.750 | 560 | 7 | 0 | 1 | 560 | 1 | 560 | 0.0 | 1138 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002250 | Msa0388360 | 0.803559 | 3.290592e-49 | -8.615850e-47 |
| Msa0004480 | Msa0388360 | 0.811864 | 5.655507e-51 | -8.615850e-47 |
| Msa0042810 | Msa0388360 | 0.905566 | 3.749579e-80 | -8.615850e-47 |
| Msa0043850 | Msa0388360 | 0.803967 | 2.707524e-49 | -8.615850e-47 |
| Msa0089730 | Msa0388360 | 0.992849 | 7.906285e-196 | -8.615850e-47 |
| Msa0090510 | Msa0388360 | 0.808297 | 3.319445e-50 | -8.615850e-47 |
| Msa0098290 | Msa0388360 | 0.814017 | 1.908185e-51 | -8.615850e-47 |
| Msa0136630 | Msa0388360 | 0.827132 | 1.852622e-54 | -8.615850e-47 |
| Msa0144530 | Msa0388360 | 0.803694 | 3.084333e-49 | -8.615850e-47 |
| Msa0152560 | Msa0388360 | 0.804107 | 2.531141e-49 | -8.615850e-47 |
| Msa0178720 | Msa0388360 | 0.858450 | 8.172569e-63 | -8.615850e-47 |
| Msa0224130 | Msa0388360 | 0.814854 | 1.246492e-51 | -8.615850e-47 |
| Msa0231920 | Msa0388360 | 0.811271 | 7.609734e-51 | -8.615850e-47 |
| Msa0372460 | Msa0388360 | 0.820725 | 5.892915e-53 | -8.615850e-47 |
| Msa0380600 | Msa0388360 | 0.812502 | 4.106035e-51 | -8.615850e-47 |
| Msa0388360 | Msa0430240 | 0.813179 | 2.917518e-51 | -8.615850e-47 |
| Msa0388360 | Msa0519160 | 0.838860 | 2.237251e-57 | -8.615850e-47 |
| Msa0388360 | Msa0536350 | 0.802460 | 5.550861e-49 | -8.615850e-47 |
| Msa0388360 | Msa0545050 | 0.817355 | 3.442017e-52 | -8.615850e-47 |
| Msa0388360 | Msa0600590 | 0.824366 | 8.390929e-54 | -8.615850e-47 |
| Msa0388360 | Msa0641130 | 0.822748 | 2.006622e-53 | -8.615850e-47 |
| Msa0388360 | Msa0654900 | 0.839032 | 2.019225e-57 | -8.615850e-47 |
| Msa0388360 | Msa0698450 | 0.828005 | 1.143417e-54 | -8.615850e-47 |
| Msa0388360 | Msa0698460 | 0.836587 | 8.575469e-57 | -8.615850e-47 |
| Msa0388360 | Msa0742430 | 0.800405 | 1.463656e-48 | -8.615850e-47 |
| Msa0388360 | Msa0772280 | 0.826071 | 3.317962e-54 | -8.615850e-47 |
| Msa0388360 | Msa0810440 | 0.836365 | 9.765162e-57 | -8.615850e-47 |
| Msa0388360 | Msa0823540 | 0.847047 | 1.480429e-59 | -8.615850e-47 |
| Msa0388360 | Msa0862620 | 0.842612 | 2.324719e-58 | -8.615850e-47 |
| Msa0388360 | Msa0863990 | 0.801501 | 8.742074e-49 | -8.615850e-47 |
| Msa0388360 | Msa0870510 | 0.802528 | 5.375881e-49 | -8.615850e-47 |
| Msa0388360 | Msa1054510 | 0.814713 | 1.338898e-51 | -8.615850e-47 |
| Msa0388360 | Msa1089190 | 0.801596 | 8.355030e-49 | -8.615850e-47 |
| Msa0388360 | Msa1107200 | 0.810828 | 9.494342e-51 | -8.615850e-47 |
| Msa0388360 | Msa1158390 | 0.804767 | 1.844377e-49 | -8.615850e-47 |
| Msa0388360 | Msa1183140 | 0.835897 | 1.283805e-56 | -8.615850e-47 |
| Msa0388360 | Msa1236440 | 0.807463 | 4.993163e-50 | -8.615850e-47 |
| Msa0388360 | Msa1238600 | 0.804217 | 2.401238e-49 | -8.615850e-47 |
| Msa0388360 | Msa1259860 | 0.803316 | 3.695571e-49 | -8.615850e-47 |
| Msa0388360 | Msa1260680 | 0.806421 | 8.292127e-50 | -8.615850e-47 |
| Msa0388360 | Msa1277670 | 0.803314 | 3.697714e-49 | -8.615850e-47 |
| Msa0388360 | Msa1280090 | 0.807617 | 4.631766e-50 | -8.615850e-47 |
| Msa0388360 | Msa1309760 | 0.829257 | 5.697194e-55 | -8.615850e-47 |
| Msa0388360 | Msa1319560 | 0.811772 | 5.922246e-51 | -8.615850e-47 |
| Msa0388360 | Msa1364080 | 0.811871 | 5.635865e-51 | -8.615850e-47 |
| Msa0388360 | Msa1369920 | -0.822582 | 2.193625e-53 | -8.615850e-47 |
| Msa0388360 | Msa1430550 | 0.804294 | 2.314399e-49 | -8.615850e-47 |
| Msa0265270 | Msa0388360 | 0.816918 | 4.316892e-52 | -8.615850e-47 |
| Msa0271220 | Msa0388360 | 0.814363 | 1.600674e-51 | -8.615850e-47 |
| Msa0305840 | Msa0388360 | 0.803207 | 3.891317e-49 | -8.615850e-47 |
| Msa0331020 | Msa0388360 | 0.804307 | 2.300462e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388360 | MtrunA17_Chr1g0208531 | 98.750 | 560 | 7 | 0 | 1 | 560 | 1 | 560 | 0.0 | 1138 |
| Msa0388360 | MtrunA17_Chr2g0304631 | 46.567 | 466 | 246 | 3 | 66 | 529 | 57 | 521 | 8.25e-139 | 412 |
| Msa0388360 | MtrunA17_Chr3g0137351 | 42.191 | 493 | 281 | 4 | 62 | 552 | 53 | 543 | 9.28e-133 | 399 |
| Msa0388360 | MtrunA17_Chr4g0065021 | 40.000 | 200 | 115 | 1 | 323 | 522 | 1 | 195 | 3.69e-45 | 158 |
| Msa0388360 | MtrunA17_Chr4g0065031 | 33.106 | 293 | 183 | 5 | 25 | 314 | 32 | 314 | 6.54e-42 | 153 |
| Msa0388360 | MtrunA17_Chr2g0329621 | 26.871 | 521 | 321 | 16 | 55 | 544 | 20 | 511 | 7.98e-40 | 152 |
| Msa0388360 | MtrunA17_Chr5g0401081 | 20.645 | 465 | 326 | 12 | 79 | 522 | 42 | 484 | 6.74e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388360 | AT1G71110.1 | 60.000 | 530 | 198 | 6 | 9 | 529 | 1 | 525 | 0.0 | 647 |
| Msa0388360 | AT2G12400.1 | 42.917 | 480 | 271 | 3 | 52 | 529 | 46 | 524 | 4.34e-131 | 394 |
| Msa0388360 | AT2G25270.1 | 38.104 | 538 | 320 | 5 | 14 | 538 | 3 | 540 | 4.62e-129 | 388 |
| Msa0388360 | AT1G80540.3 | 36.344 | 465 | 287 | 6 | 71 | 527 | 18 | 481 | 3.95e-95 | 299 |
| Msa0388360 | AT1G80540.1 | 36.344 | 465 | 287 | 6 | 71 | 527 | 64 | 527 | 9.71e-95 | 300 |
| Msa0388360 | AT1G80540.2 | 35.121 | 373 | 238 | 4 | 159 | 527 | 2 | 374 | 6.47e-73 | 238 |
| Msa0388360 | AT5G67550.1 | 21.622 | 481 | 336 | 14 | 76 | 534 | 35 | 496 | 4.54e-22 | 100 |
Find 150 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTATCTGGTTGACGTTTA+TGG | 0.177193 | 3_1:+92784143 | None:intergenic |
| AGCACAAAAGTGAAGAAAAT+TGG | 0.182572 | 3_1:-92786279 | Msa0388360:five_prime_UTR |
| TTCTGCTTTGCCTTGTTCTA+TGG | 0.194171 | 3_1:-92782143 | Msa0388360:CDS |
| ATAATCCAAAACATTATTAT+TGG | 0.225525 | 3_1:-92786527 | Msa0388360:five_prime_UTR |
| CACAAACACTTCTCCCCTTT+GGG | 0.225734 | 3_1:+92782101 | None:intergenic |
| GTTTCATTCTTGCCGTCTTA+TGG | 0.256105 | 3_1:-92784874 | Msa0388360:CDS |
| GTTGACAATATTTGCAATAT+TGG | 0.267190 | 3_1:+92783147 | None:intergenic |
| ACTGCACTCTATATACTAAA+AGG | 0.268913 | 3_1:-92781935 | Msa0388360:three_prime_UTR |
| ACTCATTTATATATCTATAT+TGG | 0.270270 | 3_1:+92781797 | None:intergenic |
| ATATTTCAGATCGGCATTAT+TGG | 0.275242 | 3_1:-92785696 | Msa0388360:CDS |
| CTCTTATTCTGGCGGCAAAT+AGG | 0.276223 | 3_1:-92785771 | Msa0388360:CDS |
| GTCTTATGGTTTGTCTCATT+TGG | 0.281337 | 3_1:-92784860 | Msa0388360:CDS |
| GTCCTACATTAATGATATTA+AGG | 0.293341 | 3_1:+92782187 | None:intergenic |
| TGTTATCACTGGATGGTTAC+TGG | 0.300691 | 3_1:-92783610 | Msa0388360:CDS |
| ATATTAAGGTAATGCTTTAA+TGG | 0.308224 | 3_1:+92782201 | None:intergenic |
| AATTCAGCTTTATCTTCAAC+TGG | 0.310962 | 3_1:-92786127 | Msa0388360:CDS |
| TATTTCAGATCGGCATTATT+GGG | 0.318265 | 3_1:-92785695 | Msa0388360:CDS |
| GAGTGCAGTAAAACAATAAT+AGG | 0.322407 | 3_1:+92781949 | None:intergenic |
| CGTGTTGTTCACTTTAATTT+TGG | 0.335918 | 3_1:+92786503 | None:intergenic |
| AGGTGATAATACTCTTATTC+TGG | 0.339822 | 3_1:-92785782 | Msa0388360:CDS |
| TTGGTCCAATAATAATGTTT+TGG | 0.362968 | 3_1:+92786522 | None:intergenic |
| TCACAAACACTTCTCCCCTT+TGG | 0.370346 | 3_1:+92782100 | None:intergenic |
| GCGCACGGCCTTGTTTGTTA+TGG | 0.371299 | 3_1:-92783914 | Msa0388360:CDS |
| TCACCTAGTGGCCCTGGTGC+TGG | 0.373820 | 3_1:+92785799 | None:intergenic |
| TTCTGATACTTGCATGGCTA+TGG | 0.374645 | 3_1:-92783278 | Msa0388360:CDS |
| CTCTTGGCTCTAACTGGACT+AGG | 0.381640 | 3_1:-92783877 | Msa0388360:intron |
| CACCACATCAAGTTTATCAT+AGG | 0.382134 | 3_1:-92786094 | Msa0388360:intron |
| ATGAAGGCTCATTCCTTCAA+TGG | 0.388869 | 3_1:-92786199 | Msa0388360:CDS |
| GGATGTATTCTCCTTTCTGT+TGG | 0.395056 | 3_1:-92784279 | Msa0388360:CDS |
| GCTAACTGCAAGTAAATCTC+TGG | 0.399430 | 3_1:+92782339 | None:intergenic |
| ATGGTTTGTCTCATTTGGCT+TGG | 0.401760 | 3_1:-92784855 | Msa0388360:CDS |
| TAGACTTCACTGCCTGCATT+TGG | 0.410089 | 3_1:+92782009 | None:intergenic |
| TCGAAGAAAATCAGGTCTAT+TGG | 0.415895 | 3_1:+92785747 | None:intergenic |
| TGAAATCCTCGAAGAAAATC+AGG | 0.422490 | 3_1:+92785739 | None:intergenic |
| GCACAAAAGTGAAGAAAATT+GGG | 0.425340 | 3_1:-92786278 | Msa0388360:five_prime_UTR |
| CATCAGATGGAAGAAGTATC+TGG | 0.429382 | 3_1:+92784130 | None:intergenic |
| TAAGTTTCACGGCGAGGCCT+TGG | 0.429494 | 3_1:-92784250 | Msa0388360:CDS |
| TTCATCTGCCAATGCTTCAA+TGG | 0.432553 | 3_1:-92782984 | Msa0388360:intron |
| TATTCTCCTTTCTGTTGGGC+AGG | 0.443697 | 3_1:-92784274 | Msa0388360:CDS |
| GATGTATTCTCCTTTCTGTT+GGG | 0.445649 | 3_1:-92784278 | Msa0388360:CDS |
| GGATAGCATAGTGGCGGCAT+TGG | 0.448863 | 3_1:+92783052 | None:intergenic |
| TGAAGGCTCATTCCTTCAAT+GGG | 0.450995 | 3_1:-92786198 | Msa0388360:CDS |
| ACGGCCTTGTTTGTTATGGC+AGG | 0.454318 | 3_1:-92783910 | Msa0388360:CDS |
| TGGGTTCATAGAGTCTAAAA+TGG | 0.455185 | 3_1:-92786259 | Msa0388360:five_prime_UTR |
| TTCATCGTTATCACGGTGGT+TGG | 0.455519 | 3_1:-92785720 | Msa0388360:CDS |
| GCAATGCTAAATTTGTGCTC+TGG | 0.457671 | 3_1:+92782031 | None:intergenic |
| ACTTCTTCCATCTGATGTCC+TGG | 0.459835 | 3_1:-92784124 | Msa0388360:CDS |
| GGAGGAAGAGGAGTGAATAT+AGG | 0.462519 | 3_1:-92785853 | Msa0388360:CDS |
| TGATTCATCTATGCTGTGGA+TGG | 0.465197 | 3_1:-92784826 | Msa0388360:CDS |
| GCAACCACATTCATTCTTTG+CGG | 0.465286 | 3_1:-92783585 | Msa0388360:CDS |
| TCGGCAGTCCTGTCTCTCCT+TGG | 0.466551 | 3_1:-92783761 | Msa0388360:intron |
| GTATGCGAGGTATCTGAATC+AGG | 0.466931 | 3_1:-92782390 | Msa0388360:CDS |
| TCATCGTTATCACGGTGGTT+GGG | 0.467508 | 3_1:-92785719 | Msa0388360:CDS |
| TTCTCGAAATTGATTGTCAA+AGG | 0.468444 | 3_1:+92783030 | None:intergenic |
| GAGGAGTGAATATAGGTTCA+TGG | 0.470463 | 3_1:-92785846 | Msa0388360:CDS |
| CTTGCATGGCTATGGGAGAA+TGG | 0.470490 | 3_1:-92783270 | Msa0388360:CDS |
| ACACAAGTGGCTCCAGCACC+AGG | 0.470901 | 3_1:-92785811 | Msa0388360:CDS |
| ACAAATCCTTTGTGAACGAT+TGG | 0.470926 | 3_1:+92784778 | None:intergenic |
| TTTGTCAGGGATGCATTCAC+AGG | 0.471664 | 3_1:-92782246 | Msa0388360:CDS |
| AAACTTCTTGATTTGTACAT+TGG | 0.474575 | 3_1:+92783005 | None:intergenic |
| GTTGATATCCAAGGAGAGAC+AGG | 0.479405 | 3_1:+92783753 | None:intergenic |
| CTGTTATATTTGCAGTCAGT+TGG | 0.479934 | 3_1:-92784914 | Msa0388360:intron |
| AAATAATACCATTGAAGCAT+TGG | 0.484010 | 3_1:+92782976 | None:intergenic |
| GCGGCAGCTTCGCTCCACCT+TGG | 0.484210 | 3_1:+92781906 | None:intergenic |
| GTTGCAAGAATCCACAATGA+AGG | 0.484798 | 3_1:-92786215 | Msa0388360:exon |
| TTGCAGTCAGTTGGATTCAC+CGG | 0.485005 | 3_1:-92784905 | Msa0388360:intron |
| TAGCATAGTGGCGGCATTGG+AGG | 0.485779 | 3_1:+92783055 | None:intergenic |
| GTATTTGCACTACAGTTGGC+AGG | 0.490378 | 3_1:-92782368 | Msa0388360:CDS |
| GGACTTGGCCTCATTTCAGT+TGG | 0.492225 | 3_1:-92782168 | Msa0388360:CDS |
| GTTGGATTCACCGGTGCCAC+GGG | 0.493182 | 3_1:-92784896 | Msa0388360:CDS |
| TTCACTTTCTTAGATCATAT+AGG | 0.495375 | 3_1:-92786328 | Msa0388360:five_prime_UTR |
| TTGCATGGCTATGGGAGAAT+GGG | 0.496761 | 3_1:-92783269 | Msa0388360:CDS |
| ATTCATCTATGCTGTGGATG+GGG | 0.500948 | 3_1:-92784824 | Msa0388360:CDS |
| TATAAAAGTCACATGGGTGT+GGG | 0.504963 | 3_1:+92786389 | None:intergenic |
| AAGAATGAAACCCGTGGCAC+CGG | 0.505503 | 3_1:+92784886 | None:intergenic |
| GTTGGGCAGGATAAGTTTCA+CGG | 0.506973 | 3_1:-92784261 | Msa0388360:CDS |
| AGTTGGATTCACCGGTGCCA+CGG | 0.507428 | 3_1:-92784897 | Msa0388360:CDS |
| TACCTTAATATCATTAATGT+AGG | 0.508015 | 3_1:-92782189 | Msa0388360:CDS |
| GTATTATCACCTAGTGGCCC+TGG | 0.510784 | 3_1:+92785793 | None:intergenic |
| TCTGATACTTGCATGGCTAT+GGG | 0.511515 | 3_1:-92783277 | Msa0388360:CDS |
| TTATAAAAGTCACATGGGTG+TGG | 0.512834 | 3_1:+92786388 | None:intergenic |
| TACAATTTCTGATACTTGCA+TGG | 0.513443 | 3_1:-92783284 | Msa0388360:CDS |
| ATGCTAAATTTGTGCTCTGG+TGG | 0.516026 | 3_1:+92782034 | None:intergenic |
| TTCTGAAGGCTAAGTAAAAG+TGG | 0.518057 | 3_1:+92782276 | None:intergenic |
| AATTTAGCATTGCCAAATGC+AGG | 0.518871 | 3_1:-92782021 | Msa0388360:CDS |
| AATATCATTAATGTAGGACT+TGG | 0.522457 | 3_1:-92782183 | Msa0388360:CDS |
| GCTCCAGCACCAGGGCCACT+AGG | 0.526747 | 3_1:-92785802 | Msa0388360:CDS |
| TCTCGAAATTGATTGTCAAA+GGG | 0.529864 | 3_1:+92783031 | None:intergenic |
| GCAGATTTGTTATCACTGGA+TGG | 0.536855 | 3_1:-92783617 | Msa0388360:intron |
| TCAGGTATTTGCACTACAGT+TGG | 0.539896 | 3_1:-92782372 | Msa0388360:CDS |
| CTAACTGCAAGTAAATCTCT+GGG | 0.545916 | 3_1:+92782340 | None:intergenic |
| ACTTATCCTGCCCAACAGAA+AGG | 0.546266 | 3_1:+92784268 | None:intergenic |
| CTTCCATCTGATGTCCTGGA+TGG | 0.547833 | 3_1:-92784120 | Msa0388360:CDS |
| GATTCATCTATGCTGTGGAT+GGG | 0.549596 | 3_1:-92784825 | Msa0388360:CDS |
| ACAAACACTTCTCCCCTTTG+GGG | 0.558946 | 3_1:+92782102 | None:intergenic |
| GCAAACGTAAATGCAACAAA+GGG | 0.559605 | 3_1:-92783106 | Msa0388360:CDS |
| AATGCAACAAAGGGTCATCC+AGG | 0.560684 | 3_1:-92783097 | Msa0388360:CDS |
| TTCATCTATGCTGTGGATGG+GGG | 0.565637 | 3_1:-92784823 | Msa0388360:CDS |
| TTGCTATTGTCTATGAACTC+AGG | 0.569871 | 3_1:+92781884 | None:intergenic |
| TGCAAACGTAAATGCAACAA+AGG | 0.571083 | 3_1:-92783107 | Msa0388360:CDS |
| ATACCATCCAGGACATCAGA+TGG | 0.573820 | 3_1:+92784117 | None:intergenic |
| CGAGGATTTCATCGTTATCA+CGG | 0.574421 | 3_1:-92785727 | Msa0388360:CDS |
| TGACAAAATTGCAATTCTGA+AGG | 0.579139 | 3_1:+92782262 | None:intergenic |
| CATGGCTATGGGAGAATGGG+TGG | 0.581284 | 3_1:-92783266 | Msa0388360:CDS |
| GCAGAACACCAACTGAAATG+AGG | 0.592050 | 3_1:+92782160 | None:intergenic |
| TTCTTTGATCAACGCATGGA+AGG | 0.594653 | 3_1:+92783209 | None:intergenic |
| TGGTATTGATAAGTTGAATG+TGG | 0.597976 | 3_1:-92784100 | Msa0388360:CDS |
| AAAGTCTTACGATGCAGCAA+AGG | 0.601124 | 3_1:+92784733 | None:intergenic |
| CTTGTGATTCATCTATGCTG+TGG | 0.603282 | 3_1:-92784830 | Msa0388360:CDS |
| TCAACTTATCAATACCATCC+AGG | 0.603553 | 3_1:+92784106 | None:intergenic |
| TAGAAATTATAAAAGTCACA+TGG | 0.608328 | 3_1:+92786382 | None:intergenic |
| ATTCAGCTTTATCTTCAACT+GGG | 0.608828 | 3_1:-92786126 | Msa0388360:CDS |
| TATTTGCACTACAGTTGGCA+GGG | 0.613241 | 3_1:-92782367 | Msa0388360:CDS |
| TTAAGGTAATGCTTTAATGG+AGG | 0.616479 | 3_1:+92782204 | None:intergenic |
| GCAAAATGAAGTTACACAAG+TGG | 0.620200 | 3_1:-92785824 | Msa0388360:CDS |
| CATAGAGTATCCATAGAACA+AGG | 0.621481 | 3_1:+92782133 | None:intergenic |
| TTGTCAAAGGGATAGCATAG+TGG | 0.622154 | 3_1:+92783043 | None:intergenic |
| TTGGGAGAATTATGTATGCG+AGG | 0.624037 | 3_1:-92782403 | Msa0388360:CDS |
| ATAAAAGTCACATGGGTGTG+GGG | 0.624614 | 3_1:+92786390 | None:intergenic |
| TGATAATACTCTTATTCTGG+CGG | 0.626823 | 3_1:-92785779 | Msa0388360:CDS |
| AGAAATTATAAAAGTCACAT+GGG | 0.627293 | 3_1:+92786383 | None:intergenic |
| ATACTAAAAGGAAGAAACCA+AGG | 0.631973 | 3_1:-92781923 | Msa0388360:three_prime_UTR |
| GGGATTAACATAAAGGACAA+AGG | 0.636198 | 3_1:-92784803 | Msa0388360:CDS |
| AACCTATGATAAACTTGATG+TGG | 0.636454 | 3_1:+92786092 | None:intergenic |
| CAAACACTTCTCCCCTTTGG+GGG | 0.639045 | 3_1:+92782103 | None:intergenic |
| CTATTGTCTATGAACTCAGG+CGG | 0.640227 | 3_1:+92781887 | None:intergenic |
| TACTCCTGCCATAACAAACA+AGG | 0.640964 | 3_1:+92783906 | None:intergenic |
| GTGGTTCTTTGATCAACGCA+TGG | 0.641600 | 3_1:+92783205 | None:intergenic |
| TGATCTAAGAAAGTGAAGAA+CGG | 0.642662 | 3_1:+92786334 | None:intergenic |
| ATGAGTATTTACATATACAC+GGG | 0.643174 | 3_1:+92781839 | None:intergenic |
| TGATTGCATGTTGATATCCA+AGG | 0.647031 | 3_1:+92783744 | None:intergenic |
| AAAGTCACATGGGTGTGGGG+TGG | 0.649539 | 3_1:+92786393 | None:intergenic |
| AAATGAGACAAACCATAAGA+CGG | 0.652641 | 3_1:+92784862 | None:intergenic |
| GTGGTTGGGATATTTCAGAT+CGG | 0.653513 | 3_1:-92785705 | Msa0388360:CDS |
| GCAGACTCTGAGAAATGTCA+CGG | 0.656398 | 3_1:-92784187 | Msa0388360:CDS |
| TGTGGAACTAAATACTGCAG+CGG | 0.659585 | 3_1:-92784082 | Msa0388360:CDS |
| CTAAGAGCAGATTCTCTGTG+TGG | 0.660144 | 3_1:+92783238 | None:intergenic |
| GCAGGATAAGTTTCACGGCG+AGG | 0.664395 | 3_1:-92784256 | Msa0388360:CDS |
| TATTGCAAATATTGTCAACA+CGG | 0.666087 | 3_1:-92783143 | Msa0388360:CDS |
| TCAAAGGGATAGCATAGTGG+CGG | 0.668642 | 3_1:+92783046 | None:intergenic |
| GAAGGAATGAGCCTTCATTG+TGG | 0.668831 | 3_1:+92786204 | None:intergenic |
| GATGAGTATTTACATATACA+CGG | 0.673410 | 3_1:+92781838 | None:intergenic |
| CACAAGTGGCTCCAGCACCA+GGG | 0.678997 | 3_1:-92785810 | Msa0388360:CDS |
| AAGGATCCAATCGTTCACAA+AGG | 0.682188 | 3_1:-92784784 | Msa0388360:CDS |
| ATAAGAGTATTATCACCTAG+TGG | 0.683571 | 3_1:+92785787 | None:intergenic |
| GGATTTCATCGTTATCACGG+TGG | 0.704106 | 3_1:-92785724 | Msa0388360:CDS |
| CACTCCGCAAAGAATGAATG+TGG | 0.705480 | 3_1:+92783581 | None:intergenic |
| GACGGCAAGAATGAAACCCG+TGG | 0.726515 | 3_1:+92784880 | None:intergenic |
| CTAAAAGGAAGAAACCAAGG+TGG | 0.757613 | 3_1:-92781920 | Msa0388360:three_prime_UTR |
| TAACTGCAAGTAAATCTCTG+GGG | 0.763572 | 3_1:+92782341 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CCTTTTAATTATTTTATTTT+CGG | - | chr3_1:92784574-92784593 | Msa0388360:intron | 10.0% |
| !! | ATTCAAAATTTAAAGATAAT+TGG | + | chr3_1:92784979-92784998 | None:intergenic | 10.0% |
| !! | ATAATCCAAAACATTATTAT+TGG | - | chr3_1:92781827-92781846 | Msa0388360:three_prime_UTR | 15.0% |
| !!! | TTTAGATCTTTTAAATCTTA+GGG | - | chr3_1:92782335-92782354 | Msa0388360:CDS | 15.0% |
| !! | ATATTGGATTTATATGTTAT+AGG | - | chr3_1:92782906-92782925 | Msa0388360:intron | 15.0% |
| !!! | ACTTTTTTTGCTTATATTTA+AGG | + | chr3_1:92783102-92783121 | None:intergenic | 15.0% |
| !!! | GAATAATCTTCTAATTTTAA+CGG | + | chr3_1:92784328-92784347 | None:intergenic | 15.0% |
| !! | CCGAAAATAAAATAATTAAA+AGG | + | chr3_1:92784577-92784596 | None:intergenic | 15.0% |
| !!! | TTTTGAATTTTTTGTCTTTA+TGG | - | chr3_1:92784991-92785010 | Msa0388360:intron | 15.0% |
| !! | AGCTTGATATATAAAATTAA+GGG | + | chr3_1:92785408-92785427 | None:intergenic | 15.0% |
| !! | AAGCTTGATATATAAAATTA+AGG | + | chr3_1:92785409-92785428 | None:intergenic | 15.0% |
| !! | AGTAAAAAAAATATCAACAT+AGG | - | chr3_1:92785824-92785843 | Msa0388360:CDS | 15.0% |
| !! | GTAAAAAAAATATCAACATA+GGG | - | chr3_1:92785825-92785844 | Msa0388360:CDS | 15.0% |
| !!! | TCATTTTGTTTAAATTTTTC+AGG | - | chr3_1:92785927-92785946 | Msa0388360:intron | 15.0% |
| !! | ACTCATTTATATATCTATAT+TGG | + | chr3_1:92786560-92786579 | None:intergenic | 15.0% |
| !! | AGAAATTATAAAAGTCACAT+GGG | + | chr3_1:92781974-92781993 | None:intergenic | 20.0% |
| !! | TAGAAATTATAAAAGTCACA+TGG | + | chr3_1:92781975-92781994 | None:intergenic | 20.0% |
| !!! | GTTTAGATCTTTTAAATCTT+AGG | - | chr3_1:92782334-92782353 | Msa0388360:CDS | 20.0% |
| !! | GATATTGTTGGATTATTATT+CGG | - | chr3_1:92782443-92782462 | Msa0388360:intron | 20.0% |
| !! | ATATTGTTGGATTATTATTC+GGG | - | chr3_1:92782444-92782463 | Msa0388360:intron | 20.0% |
| !! | GTATTTAGTCCAAATATTTA+AGG | - | chr3_1:92783126-92783145 | Msa0388360:CDS | 20.0% |
| !!! | CTTTTTTGCTTATATTTTCA+AGG | + | chr3_1:92783229-92783248 | None:intergenic | 20.0% |
| !! | TTCAAGAACAAAAATAAAGA+AGG | + | chr3_1:92783337-92783356 | None:intergenic | 20.0% |
| !! | AACATTGAATTGAAGTAAAA+GGG | + | chr3_1:92784903-92784922 | None:intergenic | 20.0% |
| !! | AAACATTGAATTGAAGTAAA+AGG | + | chr3_1:92784904-92784923 | None:intergenic | 20.0% |
| !!! | TTTTGTCTTTATGGTAAAAA+AGG | - | chr3_1:92785000-92785019 | Msa0388360:intron | 20.0% |
| !! | AGAATTAATTTATTCGTATC+AGG | + | chr3_1:92785043-92785062 | None:intergenic | 20.0% |
| !! | TGTAATTTATAATGAGTGAT+TGG | - | chr3_1:92785529-92785548 | Msa0388360:intron | 20.0% |
| !!! | TAATCTCTAAATTTTGTTCA+TGG | - | chr3_1:92785865-92785884 | Msa0388360:intron | 20.0% |
| !!! | TTGTTTAAATTTTTCAGGTT+TGG | - | chr3_1:92785932-92785951 | Msa0388360:intron | 20.0% |
| !!! | TGTTTAAATTTTTCAGGTTT+GGG | - | chr3_1:92785933-92785952 | Msa0388360:intron | 20.0% |
| !! | ATATTAAGGTAATGCTTTAA+TGG | + | chr3_1:92786156-92786175 | None:intergenic | 20.0% |
| !! | TACCTTAATATCATTAATGT+AGG | - | chr3_1:92786165-92786184 | Msa0388360:CDS | 20.0% |
| !!! | GCTCTTTATTTTTTCTTTTA+AGG | + | chr3_1:92786286-92786305 | None:intergenic | 20.0% |
| !! | TTGGTCCAATAATAATGTTT+TGG | + | chr3_1:92781835-92781854 | None:intergenic | 25.0% |
| ! | AAAGAACAAAACTAAAAACG+CGG | + | chr3_1:92781903-92781922 | None:intergenic | 25.0% |
| ! | TTCACTTTCTTAGATCATAT+AGG | - | chr3_1:92782026-92782045 | Msa0388360:CDS | 25.0% |
| !! | TTATTTGTGATTTTCTGTGA+TGG | - | chr3_1:92782306-92782325 | Msa0388360:CDS | 25.0% |
| !! | TATTTGTGATTTTCTGTGAT+GGG | - | chr3_1:92782307-92782326 | Msa0388360:CDS | 25.0% |
| ! | CAATATCATAGAGAAATGAA+AGG | + | chr3_1:92782430-92782449 | None:intergenic | 25.0% |
| ! | TCATTTCTCTATGATATTGT+TGG | - | chr3_1:92782431-92782450 | Msa0388360:intron | 25.0% |
| !!! | TTATTTGATTCCACTTTTTC+AGG | - | chr3_1:92782480-92782499 | Msa0388360:intron | 25.0% |
| !!! | TCATAATCATTTTTCTAGGT+TGG | - | chr3_1:92782706-92782725 | Msa0388360:intron | 25.0% |
| ! | TACTTGTGTGATATCTATAT+TGG | - | chr3_1:92782890-92782909 | Msa0388360:intron | 25.0% |
| ! | ATGTTATAGGAAATGTGATA+TGG | - | chr3_1:92782919-92782938 | Msa0388360:intron | 25.0% |
| ! | GTATTTAGTCCAAGTATTTA+AGG | - | chr3_1:92783254-92783273 | Msa0388360:CDS | 25.0% |
| !! | CAGATTTTTATCTTCTTCTT+TGG | - | chr3_1:92783695-92783714 | Msa0388360:intron | 25.0% |
| ! | TTATATCTATGATGAAAGGA+GGG | + | chr3_1:92783762-92783781 | None:intergenic | 25.0% |
| ! | TTTATATCTATGATGAAAGG+AGG | + | chr3_1:92783763-92783782 | None:intergenic | 25.0% |
| !! | GCTTTTATATCTATGATGAA+AGG | + | chr3_1:92783766-92783785 | None:intergenic | 25.0% |
| ! | TTCGTCAGAAATATATATGT+CGG | - | chr3_1:92784016-92784035 | Msa0388360:intron | 25.0% |
| ! | TTGATTGACAAAAAAATGGA+GGG | + | chr3_1:92784133-92784152 | None:intergenic | 25.0% |
| ! | ATTGATTGACAAAAAAATGG+AGG | + | chr3_1:92784134-92784153 | None:intergenic | 25.0% |
| ! | CTGATTGATTGACAAAAAAA+TGG | + | chr3_1:92784137-92784156 | None:intergenic | 25.0% |
| ! | ACAAAATATGCAGAATTTAG+AGG | + | chr3_1:92784381-92784400 | None:intergenic | 25.0% |
| ! | CTGAAATCTGTTAGATATAA+TGG | + | chr3_1:92784825-92784844 | None:intergenic | 25.0% |
| !!! | TTGAACTGAATTCGTTTTTT+TGG | - | chr3_1:92784860-92784879 | Msa0388360:CDS | 25.0% |
| ! | AATTGAAGTAAAAGGGTAAA+TGG | + | chr3_1:92784896-92784915 | None:intergenic | 25.0% |
| !!! | TTCATTTCAGGTTTTGTTAT+GGG | + | chr3_1:92784935-92784954 | None:intergenic | 25.0% |
| !!! | TTGAAAAAGTGTTTTGTTTG+TGG | + | chr3_1:92785171-92785190 | None:intergenic | 25.0% |
| ! | GTTGACAATATTTGCAATAT+TGG | + | chr3_1:92785210-92785229 | None:intergenic | 25.0% |
| ! | TATTGCAAATATTGTCAACA+CGG | - | chr3_1:92785211-92785230 | Msa0388360:intron | 25.0% |
| !!! | AAACTTCTTGATTTGTACAT+TGG | + | chr3_1:92785352-92785371 | None:intergenic | 25.0% |
| ! | AAATAATACCATTGAAGCAT+TGG | + | chr3_1:92785381-92785400 | None:intergenic | 25.0% |
| !!! | CATTTAAAACATTGACTTGT+TGG | - | chr3_1:92785690-92785709 | Msa0388360:intron | 25.0% |
| ! | AAATATCAACATAGGGAAAT+TGG | - | chr3_1:92785832-92785851 | Msa0388360:CDS | 25.0% |
| !! | CTAAATTTTGTTCATGGTTT+CGG | - | chr3_1:92785871-92785890 | Msa0388360:intron | 25.0% |
| ! | GTCCTACATTAATGATATTA+AGG | + | chr3_1:92786170-92786189 | None:intergenic | 25.0% |
| ! | AATATCATTAATGTAGGACT+TGG | - | chr3_1:92786171-92786190 | Msa0388360:CDS | 25.0% |
| ! | ATGAGTATTTACATATACAC+GGG | + | chr3_1:92786518-92786537 | None:intergenic | 25.0% |
| ! | GATGAGTATTTACATATACA+CGG | + | chr3_1:92786519-92786538 | None:intergenic | 25.0% |
| !! | CGTGTTGTTCACTTTAATTT+TGG | + | chr3_1:92781854-92781873 | None:intergenic | 30.0% |
| AAGAACAAAACTAAAAACGC+GGG | + | chr3_1:92781902-92781921 | None:intergenic | 30.0% | |
| TGATCTAAGAAAGTGAAGAA+CGG | + | chr3_1:92782023-92782042 | None:intergenic | 30.0% | |
| !!! | CACTTTTGTGCTTTATTTTG+AGG | + | chr3_1:92782067-92782086 | None:intergenic | 30.0% |
| AGCACAAAAGTGAAGAAAAT+TGG | - | chr3_1:92782075-92782094 | Msa0388360:CDS | 30.0% | |
| GCACAAAAGTGAAGAAAATT+GGG | - | chr3_1:92782076-92782095 | Msa0388360:CDS | 30.0% | |
| ! | AATTCAGCTTTATCTTCAAC+TGG | - | chr3_1:92782227-92782246 | Msa0388360:CDS | 30.0% |
| ! | ATTCAGCTTTATCTTCAACT+GGG | - | chr3_1:92782228-92782247 | Msa0388360:CDS | 30.0% |
| AACCTATGATAAACTTGATG+TGG | + | chr3_1:92782265-92782284 | None:intergenic | 30.0% | |
| ! | TTAAATCTTAGGGCTTTTGT+TGG | - | chr3_1:92782345-92782364 | Msa0388360:CDS | 30.0% |
| !! | TTGGATTATTATTCGGGTTT+TGG | - | chr3_1:92782450-92782469 | Msa0388360:intron | 30.0% |
| !! | ATAAGAGTATTATCACCTAG+TGG | + | chr3_1:92782570-92782589 | None:intergenic | 30.0% |
| AGGTGATAATACTCTTATTC+TGG | - | chr3_1:92782572-92782591 | Msa0388360:intron | 30.0% | |
| TGATAATACTCTTATTCTGG+CGG | - | chr3_1:92782575-92782594 | Msa0388360:intron | 30.0% | |
| ATATTTCAGATCGGCATTAT+TGG | - | chr3_1:92782658-92782677 | Msa0388360:intron | 30.0% | |
| TATTTCAGATCGGCATTATT+GGG | - | chr3_1:92782659-92782678 | Msa0388360:intron | 30.0% | |
| AGAAAAATGATTATGAGCAG+AGG | + | chr3_1:92782702-92782721 | None:intergenic | 30.0% | |
| !! | CTGCTCATAATCATTTTTCT+AGG | - | chr3_1:92782702-92782721 | Msa0388360:intron | 30.0% |
| !! | AATCATTTTTCTAGGTTGGA+TGG | - | chr3_1:92782710-92782729 | Msa0388360:intron | 30.0% |
| TTATAGGAAATGTGATATGG+TGG | - | chr3_1:92782922-92782941 | Msa0388360:intron | 30.0% | |
| ATGTCAATTATGCAGCAATA+TGG | + | chr3_1:92783048-92783067 | None:intergenic | 30.0% | |
| ! | TCCAAATATTTAAGGCTAGA+GGG | - | chr3_1:92783134-92783153 | Msa0388360:CDS | 30.0% |
| AAAGACAGAAAAACAGAGAA+GGG | + | chr3_1:92783168-92783187 | None:intergenic | 30.0% | |
| TAAAGACAGAAAAACAGAGA+AGG | + | chr3_1:92783169-92783188 | None:intergenic | 30.0% | |
| TAAAGATAGAAAGACAGAGA+AGG | + | chr3_1:92783296-92783315 | None:intergenic | 30.0% | |
| AAATGAGACAAACCATAAGA+CGG | + | chr3_1:92783495-92783514 | None:intergenic | 30.0% | |
| ! | CAGCTTTTTATCTTCTACTT+TGG | - | chr3_1:92783662-92783681 | Msa0388360:intron | 30.0% |
| TATATCTATGATGAAAGGAG+GGG | + | chr3_1:92783761-92783780 | None:intergenic | 30.0% | |
| ! | ATCTAATCACTCTGTTTTCA+TGG | - | chr3_1:92783791-92783810 | Msa0388360:intron | 30.0% |
| ! | ATGGTTAGTTATCACTTATC+AGG | - | chr3_1:92783810-92783829 | Msa0388360:intron | 30.0% |
| GAAAATCTATTTACATGTCG+TGG | - | chr3_1:92783854-92783873 | Msa0388360:intron | 30.0% | |
| TTCTGCTCAAGTTAAATTTC+TGG | - | chr3_1:92783972-92783991 | Msa0388360:intron | 30.0% | |
| TTCTGACGAATAAAACATTG+AGG | + | chr3_1:92784006-92784025 | None:intergenic | 30.0% | |
| !! | TGGTATTGATAAGTTGAATG+TGG | - | chr3_1:92784254-92784273 | Msa0388360:CDS | 30.0% |
| !! | GGAATTTTCATCTGTTGTTT+CGG | + | chr3_1:92784307-92784326 | None:intergenic | 30.0% |
| AGTTTAGCATCATACTATGA+TGG | + | chr3_1:92784405-92784424 | None:intergenic | 30.0% | |
| !!! | CTAAACTCTGCTTATTTTGT+AGG | - | chr3_1:92784418-92784437 | Msa0388360:intron | 30.0% |
| !!! | TTTTGCAGATTTGTTATCAC+TGG | - | chr3_1:92784733-92784752 | Msa0388360:intron | 30.0% |
| !!! | GTTCATTTCAGGTTTTGTTA+TGG | + | chr3_1:92784936-92784955 | None:intergenic | 30.0% |
| ! | CAATATAACTGGTTCATTTC+AGG | + | chr3_1:92784947-92784966 | None:intergenic | 30.0% |
| GGATCTCAATTCAATATAAC+TGG | + | chr3_1:92784958-92784977 | None:intergenic | 30.0% | |
| TACAATTTCTGATACTTGCA+TGG | - | chr3_1:92785070-92785089 | Msa0388360:intron | 30.0% | |
| TCTCGAAATTGATTGTCAAA+GGG | + | chr3_1:92785326-92785345 | None:intergenic | 30.0% | |
| TTCTCGAAATTGATTGTCAA+AGG | + | chr3_1:92785327-92785346 | None:intergenic | 30.0% | |
| ATATATCAAGCTTTGCTAGA+TGG | - | chr3_1:92785416-92785435 | Msa0388360:intron | 30.0% | |
| ! | GTGAAAACCCATTTGAATTT+TGG | + | chr3_1:92785577-92785596 | None:intergenic | 30.0% |
| !! | CAAGTCAATGTTTTAAATGC+CGG | + | chr3_1:92785689-92785708 | None:intergenic | 30.0% |
| TGTACTATACTTGGTACTAA+AGG | - | chr3_1:92785739-92785758 | Msa0388360:CDS | 30.0% | |
| ! | TTTTTACTCAGCTAACTGAT+CGG | + | chr3_1:92785812-92785831 | None:intergenic | 30.0% |
| TGACAAAATTGCAATTCTGA+AGG | + | chr3_1:92786095-92786114 | None:intergenic | 30.0% | |
| ! | TTCAGAATTGCAATTTTGTC+AGG | - | chr3_1:92786094-92786113 | Msa0388360:intron | 30.0% |
| ! | TCAGAATTGCAATTTTGTCA+GGG | - | chr3_1:92786095-92786114 | Msa0388360:CDS | 30.0% |
| TTAAGGTAATGCTTTAATGG+AGG | + | chr3_1:92786153-92786172 | None:intergenic | 30.0% | |
| GAGTGCAGTAAAACAATAAT+AGG | + | chr3_1:92786408-92786427 | None:intergenic | 30.0% | |
| ACTGCACTCTATATACTAAA+AGG | - | chr3_1:92786419-92786438 | Msa0388360:five_prime_UTR | 30.0% | |
| ATACTAAAAGGAAGAAACCA+AGG | - | chr3_1:92786431-92786450 | Msa0388360:five_prime_UTR | 30.0% | |
| TATAAAAGTCACATGGGTGT+GGG | + | chr3_1:92781968-92781987 | None:intergenic | 35.0% | |
| TTATAAAAGTCACATGGGTG+TGG | + | chr3_1:92781969-92781988 | None:intergenic | 35.0% | |
| TGGGTTCATAGAGTCTAAAA+TGG | - | chr3_1:92782095-92782114 | Msa0388360:CDS | 35.0% | |
| GAAAAACGAAAACCCATTGA+AGG | + | chr3_1:92782171-92782190 | None:intergenic | 35.0% | |
| CACCACATCAAGTTTATCAT+AGG | - | chr3_1:92782260-92782279 | Msa0388360:CDS | 35.0% | |
| !!! | TTTGATTCCACTTTTTCAGG+AGG | - | chr3_1:92782483-92782502 | Msa0388360:intron | 35.0% |
| GCAAAATGAAGTTACACAAG+TGG | - | chr3_1:92782530-92782549 | Msa0388360:intron | 35.0% | |
| TCGAAGAAAATCAGGTCTAT+TGG | + | chr3_1:92782610-92782629 | None:intergenic | 35.0% | |
| ! | AATAGACCTGATTTTCTTCG+AGG | - | chr3_1:92782609-92782628 | Msa0388360:intron | 35.0% |
| TGAAATCCTCGAAGAAAATC+AGG | + | chr3_1:92782618-92782637 | None:intergenic | 35.0% | |
| ACAAATCTATGACATCATGC+TGG | + | chr3_1:92782784-92782803 | None:intergenic | 35.0% | |
| TTCTCTGTGCAATGAAATCA+TGG | - | chr3_1:92783022-92783041 | Msa0388360:CDS | 35.0% | |
| ! | TTGCTTATATTTAAGGCCGA+GGG | + | chr3_1:92783095-92783114 | None:intergenic | 35.0% |
| ! | TTTGCTTATATTTAAGGCCG+AGG | + | chr3_1:92783096-92783115 | None:intergenic | 35.0% |
| ! | GTCCAAATATTTAAGGCTAG+AGG | - | chr3_1:92783133-92783152 | Msa0388360:CDS | 35.0% |
| !! | TCCCTCTAGCCTTAAATATT+TGG | + | chr3_1:92783138-92783157 | None:intergenic | 35.0% |
| ! | TCCAAGTATTTAAGGCTAGA+GGG | - | chr3_1:92783262-92783281 | Msa0388360:CDS | 35.0% |
| CTGTTATATTTGCAGTCAGT+TGG | - | chr3_1:92783440-92783459 | Msa0388360:intron | 35.0% | |
| ! | GTCTTATGGTTTGTCTCATT+TGG | - | chr3_1:92783494-92783513 | Msa0388360:intron | 35.0% |
| GGGATTAACATAAAGGACAA+AGG | - | chr3_1:92783551-92783570 | Msa0388360:intron | 35.0% | |
| ACAAATCCTTTGTGAACGAT+TGG | + | chr3_1:92783579-92783598 | None:intergenic | 35.0% | |
| ATATCTATGATGAAAGGAGG+GGG | + | chr3_1:92783760-92783779 | None:intergenic | 35.0% | |
| TTTCCATGACTGAATTGCAA+AGG | - | chr3_1:92783891-92783910 | Msa0388360:CDS | 35.0% | |
| GATGTATTCTCCTTTCTGTT+GGG | - | chr3_1:92784076-92784095 | Msa0388360:CDS | 35.0% | |
| !! | AAAAAAATGGAGGGTATCCA+AGG | + | chr3_1:92784124-92784143 | None:intergenic | 35.0% |
| ! | GACGTTTATGGTTTTTGCAA+GGG | + | chr3_1:92784202-92784221 | None:intergenic | 35.0% |
| ! | TGACGTTTATGGTTTTTGCA+AGG | + | chr3_1:92784203-92784222 | None:intergenic | 35.0% |
| AAGTATCTGGTTGACGTTTA+TGG | + | chr3_1:92784214-92784233 | None:intergenic | 35.0% | |
| TCAACTTATCAATACCATCC+AGG | + | chr3_1:92784251-92784270 | None:intergenic | 35.0% | |
| TATGCAGAATTTAGAGGTCA+AGG | + | chr3_1:92784375-92784394 | None:intergenic | 35.0% | |
| !!! | ATTTTTCTCTTGGCTCTAAC+TGG | - | chr3_1:92784471-92784490 | Msa0388360:intron | 35.0% |
| TGATTGCATGTTGATATCCA+AGG | + | chr3_1:92784613-92784632 | None:intergenic | 35.0% | |
| AAAGGATCATTCAGATAGCT+AGG | + | chr3_1:92784681-92784700 | None:intergenic | 35.0% | |
| TAAAAGGGTAAATGGCCAAA+GGG | + | chr3_1:92784888-92784907 | None:intergenic | 35.0% | |
| TGCAAACGTAAATGCAACAA+AGG | - | chr3_1:92785247-92785266 | Msa0388360:intron | 35.0% | |
| GCAAACGTAAATGCAACAAA+GGG | - | chr3_1:92785248-92785267 | Msa0388360:intron | 35.0% | |
| ! | CAGGTTTTTACAATCAGTCT+GGG | - | chr3_1:92785276-92785295 | Msa0388360:intron | 35.0% |
| ! | CTTTGCTAGATGGTGATTTT+TGG | - | chr3_1:92785426-92785445 | Msa0388360:intron | 35.0% |
| ! | CACACATACTCAAGTTTGTT+GGG | + | chr3_1:92785479-92785498 | None:intergenic | 35.0% |
| ACACACATACTCAAGTTTGT+TGG | + | chr3_1:92785480-92785499 | None:intergenic | 35.0% | |
| ! | AGTGATTGGTTGATCCAAAT+AGG | - | chr3_1:92785543-92785562 | Msa0388360:intron | 35.0% |
| ! | GTGATTGGTTGATCCAAATA+GGG | - | chr3_1:92785544-92785563 | Msa0388360:intron | 35.0% |
| CCTTCAGCCAAAATTCAAAT+GGG | - | chr3_1:92785567-92785586 | Msa0388360:intron | 35.0% | |
| ! | GTTTTCACTTGTATTCAACC+AGG | - | chr3_1:92785589-92785608 | Msa0388360:intron | 35.0% |
| !! | TCAATGTTTTAAATGCCGGT+AGG | + | chr3_1:92785685-92785704 | None:intergenic | 35.0% |
| TTGACTCAGTGTACTATACT+TGG | - | chr3_1:92785730-92785749 | Msa0388360:CDS | 35.0% | |
| TAACTGCAAGTAAATCTCTG+GGG | + | chr3_1:92786016-92786035 | None:intergenic | 35.0% | |
| CTAACTGCAAGTAAATCTCT+GGG | + | chr3_1:92786017-92786036 | None:intergenic | 35.0% | |
| ! | TTCTGAAGGCTAAGTAAAAG+TGG | + | chr3_1:92786081-92786100 | None:intergenic | 35.0% |
| ! | CATAGAGTATCCATAGAACA+AGG | + | chr3_1:92786224-92786243 | None:intergenic | 35.0% |
| AATTTAGCATTGCCAAATGC+AGG | - | chr3_1:92786333-92786352 | Msa0388360:five_prime_UTR | 35.0% | |
| ! | TTGCTATTGTCTATGAACTC+AGG | + | chr3_1:92786473-92786492 | None:intergenic | 35.0% |
| ATAAAAGTCACATGGGTGTG+GGG | + | chr3_1:92781967-92781986 | None:intergenic | 40.0% | |
| GTTGCAAGAATCCACAATGA+AGG | - | chr3_1:92782139-92782158 | Msa0388360:CDS | 40.0% | |
| ATGAAGGCTCATTCCTTCAA+TGG | - | chr3_1:92782155-92782174 | Msa0388360:CDS | 40.0% | |
| TGAAGGCTCATTCCTTCAAT+GGG | - | chr3_1:92782156-92782175 | Msa0388360:CDS | 40.0% | |
| !!! | GTGATTTTCTGTGATGGGTT+TGG | - | chr3_1:92782312-92782331 | Msa0388360:CDS | 40.0% |
| ! | AATCTTAGGGCTTTTGTTGG+TGG | - | chr3_1:92782348-92782367 | Msa0388360:CDS | 40.0% |
| ! | ATCTTAGGGCTTTTGTTGGT+GGG | - | chr3_1:92782349-92782368 | Msa0388360:CDS | 40.0% |
| GAGGAGTGAATATAGGTTCA+TGG | - | chr3_1:92782508-92782527 | Msa0388360:intron | 40.0% | |
| CGAGGATTTCATCGTTATCA+CGG | - | chr3_1:92782627-92782646 | Msa0388360:intron | 40.0% | |
| GTGGTTGGGATATTTCAGAT+CGG | - | chr3_1:92782649-92782668 | Msa0388360:intron | 40.0% | |
| TTATTGGGCTGTAAGTGCTT+TGG | - | chr3_1:92782674-92782693 | Msa0388360:intron | 40.0% | |
| AGATCCTTGCTGCATTTAAG+TGG | - | chr3_1:92782824-92782843 | Msa0388360:intron | 40.0% | |
| GATCCTTGCTGCATTTAAGT+GGG | - | chr3_1:92782825-92782844 | Msa0388360:intron | 40.0% | |
| TTTCCCACTTAAATGCAGCA+AGG | + | chr3_1:92782831-92782850 | None:intergenic | 40.0% | |
| TGCTGCATTTAAGTGGGAAA+TGG | - | chr3_1:92782831-92782850 | Msa0388360:intron | 40.0% | |
| TGCACAGAGAACAACAATGA+TGG | + | chr3_1:92783013-92783032 | None:intergenic | 40.0% | |
| TGAAGATGTACATACTCCCT+CGG | - | chr3_1:92783076-92783095 | Msa0388360:CDS | 40.0% | |
| ! | GTCCAAGTATTTAAGGCTAG+AGG | - | chr3_1:92783261-92783280 | Msa0388360:CDS | 40.0% |
| !! | TCCCTCTAGCCTTAAATACT+TGG | + | chr3_1:92783266-92783285 | None:intergenic | 40.0% |
| TTGTTGTCGAGTGAGAAGAT+TGG | - | chr3_1:92783397-92783416 | Msa0388360:intron | 40.0% | |
| GTTTCATTCTTGCCGTCTTA+TGG | - | chr3_1:92783480-92783499 | Msa0388360:intron | 40.0% | |
| ! | ATGGTTTGTCTCATTTGGCT+TGG | - | chr3_1:92783499-92783518 | Msa0388360:intron | 40.0% |
| CTTGTGATTCATCTATGCTG+TGG | - | chr3_1:92783524-92783543 | Msa0388360:intron | 40.0% | |
| TGATTCATCTATGCTGTGGA+TGG | - | chr3_1:92783528-92783547 | Msa0388360:intron | 40.0% | |
| GATTCATCTATGCTGTGGAT+GGG | - | chr3_1:92783529-92783548 | Msa0388360:intron | 40.0% | |
| ATTCATCTATGCTGTGGATG+GGG | - | chr3_1:92783530-92783549 | Msa0388360:intron | 40.0% | |
| TGGATGGGGGATTAACATAA+AGG | - | chr3_1:92783544-92783563 | Msa0388360:intron | 40.0% | |
| AAGGATCCAATCGTTCACAA+AGG | - | chr3_1:92783570-92783589 | Msa0388360:CDS | 40.0% | |
| AAAGTCTTACGATGCAGCAA+AGG | + | chr3_1:92783624-92783643 | None:intergenic | 40.0% | |
| TATCTATGATGAAAGGAGGG+GGG | + | chr3_1:92783759-92783778 | None:intergenic | 40.0% | |
| CATCCTTTGCAATTCAGTCA+TGG | + | chr3_1:92783897-92783916 | None:intergenic | 40.0% | |
| TTGCAATCTCTCAATCACAC+AGG | - | chr3_1:92784049-92784068 | Msa0388360:CDS | 40.0% | |
| GGATGTATTCTCCTTTCTGT+TGG | - | chr3_1:92784075-92784094 | Msa0388360:CDS | 40.0% | |
| !! | CATCAGATGGAAGAAGTATC+TGG | + | chr3_1:92784227-92784246 | None:intergenic | 40.0% |
| TGTGGAACTAAATACTGCAG+CGG | - | chr3_1:92784272-92784291 | Msa0388360:CDS | 40.0% | |
| TACTCCTGCCATAACAAACA+AGG | + | chr3_1:92784451-92784470 | None:intergenic | 40.0% | |
| ! | GGCAGGAGTAATTTTTCTCT+TGG | - | chr3_1:92784461-92784480 | Msa0388360:intron | 40.0% |
| !! | GCAGATTTGTTATCACTGGA+TGG | - | chr3_1:92784737-92784756 | Msa0388360:intron | 40.0% |
| TGTTATCACTGGATGGTTAC+TGG | - | chr3_1:92784744-92784763 | Msa0388360:CDS | 40.0% | |
| GCAACCACATTCATTCTTTG+CGG | - | chr3_1:92784769-92784788 | Msa0388360:CDS | 40.0% | |
| !!! | TTCGTTTTTTTGGCTCCCTT+TGG | - | chr3_1:92784870-92784889 | Msa0388360:CDS | 40.0% |
| GTAAAAGGGTAAATGGCCAA+AGG | + | chr3_1:92784889-92784908 | None:intergenic | 40.0% | |
| TTCTGATACTTGCATGGCTA+TGG | - | chr3_1:92785076-92785095 | Msa0388360:intron | 40.0% | |
| TCTGATACTTGCATGGCTAT+GGG | - | chr3_1:92785077-92785096 | Msa0388360:intron | 40.0% | |
| TTCTTTGATCAACGCATGGA+AGG | + | chr3_1:92785148-92785167 | None:intergenic | 40.0% | |
| CCAGACTGATTGTAAAAACC+TGG | + | chr3_1:92785278-92785297 | None:intergenic | 40.0% | |
| ! | CCAGGTTTTTACAATCAGTC+TGG | - | chr3_1:92785275-92785294 | Msa0388360:intron | 40.0% |
| TTGTCAAAGGGATAGCATAG+TGG | + | chr3_1:92785314-92785333 | None:intergenic | 40.0% | |
| TTCATCTGCCAATGCTTCAA+TGG | - | chr3_1:92785370-92785389 | Msa0388360:intron | 40.0% | |
| !!! | GCTAGATGGTGATTTTTGGT+AGG | - | chr3_1:92785430-92785449 | Msa0388360:intron | 40.0% |
| !! | CATACTCAAGTTTGTTGGGA+TGG | + | chr3_1:92785475-92785494 | None:intergenic | 40.0% |
| GCCTTCAGCCAAAATTCAAA+TGG | - | chr3_1:92785566-92785585 | Msa0388360:intron | 40.0% | |
| !!! | CCCATTTGAATTTTGGCTGA+AGG | + | chr3_1:92785570-92785589 | None:intergenic | 40.0% |
| ACTAACCACCATGCAACATT+CGG | + | chr3_1:92785619-92785638 | None:intergenic | 40.0% | |
| TTCGGTCTGTGAATCGTAAA+AGG | - | chr3_1:92785889-92785908 | Msa0388360:intron | 40.0% | |
| TTGGGAGAATTATGTATGCG+AGG | - | chr3_1:92785951-92785970 | Msa0388360:intron | 40.0% | |
| TCAGGTATTTGCACTACAGT+TGG | - | chr3_1:92785982-92786001 | Msa0388360:intron | 40.0% | |
| TATTTGCACTACAGTTGGCA+GGG | - | chr3_1:92785987-92786006 | Msa0388360:intron | 40.0% | |
| GCTAACTGCAAGTAAATCTC+TGG | + | chr3_1:92786018-92786037 | None:intergenic | 40.0% | |
| ! | TTCTGCTTTGCCTTGTTCTA+TGG | - | chr3_1:92786211-92786230 | Msa0388360:exon | 40.0% |
| ATGCTAAATTTGTGCTCTGG+TGG | + | chr3_1:92786323-92786342 | None:intergenic | 40.0% | |
| GCAATGCTAAATTTGTGCTC+TGG | + | chr3_1:92786326-92786345 | None:intergenic | 40.0% | |
| CTAAAAGGAAGAAACCAAGG+TGG | - | chr3_1:92786434-92786453 | Msa0388360:five_prime_UTR | 40.0% | |
| CTATTGTCTATGAACTCAGG+CGG | + | chr3_1:92786470-92786489 | None:intergenic | 40.0% | |
| GAAGGAATGAGCCTTCATTG+TGG | + | chr3_1:92782153-92782172 | None:intergenic | 45.0% | |
| !!! | TCCACTTTTTCAGGAGGAAG+AGG | - | chr3_1:92782489-92782508 | Msa0388360:intron | 45.0% |
| TCCTCTTCCTCCTGAAAAAG+TGG | + | chr3_1:92782493-92782512 | None:intergenic | 45.0% | |
| GGAGGAAGAGGAGTGAATAT+AGG | - | chr3_1:92782501-92782520 | Msa0388360:intron | 45.0% | |
| CTCTTATTCTGGCGGCAAAT+AGG | - | chr3_1:92782583-92782602 | Msa0388360:intron | 45.0% | |
| GGATTTCATCGTTATCACGG+TGG | - | chr3_1:92782630-92782649 | Msa0388360:intron | 45.0% | |
| TTCATCGTTATCACGGTGGT+TGG | - | chr3_1:92782634-92782653 | Msa0388360:intron | 45.0% | |
| TCATCGTTATCACGGTGGTT+GGG | - | chr3_1:92782635-92782654 | Msa0388360:intron | 45.0% | |
| TTGCAGTCAGTTGGATTCAC+CGG | - | chr3_1:92783449-92783468 | Msa0388360:intron | 45.0% | |
| TTCATCTATGCTGTGGATGG+GGG | - | chr3_1:92783531-92783550 | Msa0388360:intron | 45.0% | |
| ATCTATGATGAAAGGAGGGG+GGG | + | chr3_1:92783758-92783777 | None:intergenic | 45.0% | |
| ATCTCTCAATCACACAGGAC+TGG | - | chr3_1:92784054-92784073 | Msa0388360:CDS | 45.0% | |
| TATTCTCCTTTCTGTTGGGC+AGG | - | chr3_1:92784080-92784099 | Msa0388360:CDS | 45.0% | |
| ACTTATCCTGCCCAACAGAA+AGG | + | chr3_1:92784089-92784108 | None:intergenic | 45.0% | |
| GTTGGGCAGGATAAGTTTCA+CGG | - | chr3_1:92784093-92784112 | Msa0388360:CDS | 45.0% | |
| ! | GCAGACTCTGAGAAATGTCA+CGG | - | chr3_1:92784167-92784186 | Msa0388360:CDS | 45.0% |
| ACTTCTTCCATCTGATGTCC+TGG | - | chr3_1:92784230-92784249 | Msa0388360:CDS | 45.0% | |
| ATACCATCCAGGACATCAGA+TGG | + | chr3_1:92784240-92784259 | None:intergenic | 45.0% | |
| !!! | CTGCTTATTTTGTAGGCGCA+CGG | - | chr3_1:92784425-92784444 | Msa0388360:intron | 45.0% |
| GTTGATATCCAAGGAGAGAC+AGG | + | chr3_1:92784604-92784623 | None:intergenic | 45.0% | |
| CAGATAGCTAGGCATAGCAA+AGG | + | chr3_1:92784670-92784689 | None:intergenic | 45.0% | |
| CACTCCGCAAAGAATGAATG+TGG | + | chr3_1:92784776-92784795 | None:intergenic | 45.0% | |
| TTGCATGGCTATGGGAGAAT+GGG | - | chr3_1:92785085-92785104 | Msa0388360:intron | 45.0% | |
| CTAAGAGCAGATTCTCTGTG+TGG | + | chr3_1:92785119-92785138 | None:intergenic | 45.0% | |
| GTGGTTCTTTGATCAACGCA+TGG | + | chr3_1:92785152-92785171 | None:intergenic | 45.0% | |
| AATGCAACAAAGGGTCATCC+AGG | - | chr3_1:92785257-92785276 | Msa0388360:intron | 45.0% | |
| TCAAAGGGATAGCATAGTGG+CGG | + | chr3_1:92785311-92785330 | None:intergenic | 45.0% | |
| !! | ACTCAAGTTTGTTGGGATGG+CGG | + | chr3_1:92785472-92785491 | None:intergenic | 45.0% |
| !! | TTTTGGCTGAAGGCCCTATT+TGG | + | chr3_1:92785560-92785579 | None:intergenic | 45.0% |
| GTGTGTTAGACATGACCTAC+CGG | - | chr3_1:92785667-92785686 | Msa0388360:intron | 45.0% | |
| GGTCTGTGAATCGTAAAAGG+AGG | - | chr3_1:92785892-92785911 | Msa0388360:intron | 45.0% | |
| ! | GTATGCGAGGTATCTGAATC+AGG | - | chr3_1:92785964-92785983 | Msa0388360:intron | 45.0% |
| GTATTTGCACTACAGTTGGC+AGG | - | chr3_1:92785986-92786005 | Msa0388360:intron | 45.0% | |
| TTTGTCAGGGATGCATTCAC+AGG | - | chr3_1:92786108-92786127 | Msa0388360:CDS | 45.0% | |
| GCAGAACACCAACTGAAATG+AGG | + | chr3_1:92786197-92786216 | None:intergenic | 45.0% | |
| ACAAACACTTCTCCCCTTTG+GGG | + | chr3_1:92786255-92786274 | None:intergenic | 45.0% | |
| CACAAACACTTCTCCCCTTT+GGG | + | chr3_1:92786256-92786275 | None:intergenic | 45.0% | |
| TCACAAACACTTCTCCCCTT+TGG | + | chr3_1:92786257-92786276 | None:intergenic | 45.0% | |
| TAGACTTCACTGCCTGCATT+TGG | + | chr3_1:92786348-92786367 | None:intergenic | 45.0% | |
| !! | TCTAAAAAATAAATAAAAAA+AGG | + | chr3_1:92784699-92784718 | None:intergenic | 5.0% |
| GTATTATCACCTAGTGGCCC+TGG | + | chr3_1:92782564-92782583 | None:intergenic | 50.0% | |
| AAGAATGAAACCCGTGGCAC+CGG | + | chr3_1:92783471-92783490 | None:intergenic | 50.0% | |
| TCTATGATGAAAGGAGGGGG+GGG | + | chr3_1:92783757-92783776 | None:intergenic | 50.0% | |
| CTTCCATCTGATGTCCTGGA+TGG | - | chr3_1:92784234-92784253 | Msa0388360:CDS | 50.0% | |
| !! | ACGGCCTTGTTTGTTATGGC+AGG | - | chr3_1:92784444-92784463 | Msa0388360:intron | 50.0% |
| !! | CTCTTGGCTCTAACTGGACT+AGG | - | chr3_1:92784477-92784496 | Msa0388360:intron | 50.0% |
| CTTGCATGGCTATGGGAGAA+TGG | - | chr3_1:92785084-92785103 | Msa0388360:intron | 50.0% | |
| !! | TCAAGTTTGTTGGGATGGCG+GGG | + | chr3_1:92785470-92785489 | None:intergenic | 50.0% |
| !! | CTCAAGTTTGTTGGGATGGC+GGG | + | chr3_1:92785471-92785490 | None:intergenic | 50.0% |
| CATGCAACATTCGGTTCACC+TGG | + | chr3_1:92785610-92785629 | None:intergenic | 50.0% | |
| CAGGTGAACCGAATGTTGCA+TGG | - | chr3_1:92785608-92785627 | Msa0388360:intron | 50.0% | |
| GTGAACCGAATGTTGCATGG+TGG | - | chr3_1:92785611-92785630 | Msa0388360:intron | 50.0% | |
| GGACTTGGCCTCATTTCAGT+TGG | - | chr3_1:92786186-92786205 | Msa0388360:CDS | 50.0% | |
| CAAACACTTCTCCCCTTTGG+GGG | + | chr3_1:92786254-92786273 | None:intergenic | 50.0% | |
| AAAGTCACATGGGTGTGGGG+TGG | + | chr3_1:92781964-92781983 | None:intergenic | 55.0% | |
| ! | AGTTGGATTCACCGGTGCCA+CGG | - | chr3_1:92783457-92783476 | Msa0388360:intron | 55.0% |
| GACGGCAAGAATGAAACCCG+TGG | + | chr3_1:92783477-92783496 | None:intergenic | 55.0% | |
| TATGATGAAAGGAGGGGGGG+GGG | + | chr3_1:92783755-92783774 | None:intergenic | 55.0% | |
| CTATGATGAAAGGAGGGGGG+GGG | + | chr3_1:92783756-92783775 | None:intergenic | 55.0% | |
| GCAGGATAAGTTTCACGGCG+AGG | - | chr3_1:92784098-92784117 | Msa0388360:CDS | 55.0% | |
| TAAGTTTCACGGCGAGGCCT+TGG | - | chr3_1:92784104-92784123 | Msa0388360:CDS | 55.0% | |
| !! | GCGCACGGCCTTGTTTGTTA+TGG | - | chr3_1:92784440-92784459 | Msa0388360:intron | 55.0% |
| CATGGCTATGGGAGAATGGG+TGG | - | chr3_1:92785088-92785107 | Msa0388360:intron | 55.0% | |
| ! | TAGCATAGTGGCGGCATTGG+AGG | + | chr3_1:92785302-92785321 | None:intergenic | 55.0% |
| GGATAGCATAGTGGCGGCAT+TGG | + | chr3_1:92785305-92785324 | None:intergenic | 55.0% | |
| ACACAAGTGGCTCCAGCACC+AGG | - | chr3_1:92782543-92782562 | Msa0388360:intron | 60.0% | |
| CACAAGTGGCTCCAGCACCA+GGG | - | chr3_1:92782544-92782563 | Msa0388360:intron | 60.0% | |
| !! | GTTGGATTCACCGGTGCCAC+GGG | - | chr3_1:92783458-92783477 | Msa0388360:intron | 60.0% |
| ATGATGAAAGGAGGGGGGGG+GGG | + | chr3_1:92783754-92783773 | None:intergenic | 60.0% | |
| TCGGCAGTCCTGTCTCTCCT+TGG | - | chr3_1:92784593-92784612 | Msa0388360:intron | 60.0% | |
| !! | GTTTGTTGGGATGGCGGGGA+GGG | + | chr3_1:92785466-92785485 | None:intergenic | 60.0% |
| !! | AGTTTGTTGGGATGGCGGGG+AGG | + | chr3_1:92785467-92785486 | None:intergenic | 60.0% |
| TCTATGCGAACCGCCCCCAA+AGG | - | chr3_1:92786238-92786257 | Msa0388360:five_prime_UTR | 60.0% | |
| CTATGCGAACCGCCCCCAAA+GGG | - | chr3_1:92786239-92786258 | Msa0388360:five_prime_UTR | 60.0% | |
| TATGCGAACCGCCCCCAAAG+GGG | - | chr3_1:92786240-92786259 | Msa0388360:five_prime_UTR | 60.0% | |
| ! | ACACTTCTCCCCTTTGGGGG+CGG | + | chr3_1:92786251-92786270 | None:intergenic | 60.0% |
| TCACCTAGTGGCCCTGGTGC+TGG | + | chr3_1:92782558-92782577 | None:intergenic | 65.0% | |
| TGATGAAAGGAGGGGGGGGG+GGG | + | chr3_1:92783753-92783772 | None:intergenic | 65.0% | |
| GCTCCAGCACCAGGGCCACT+AGG | - | chr3_1:92782552-92782571 | Msa0388360:intron | 70.0% | |
| ATGAAAGGAGGGGGGGGGGG+GGG | + | chr3_1:92783751-92783770 | None:intergenic | 70.0% | |
| GATGAAAGGAGGGGGGGGGG+GGG | + | chr3_1:92783752-92783771 | None:intergenic | 70.0% | |
| !! | TTGGGATGGCGGGGAGGGAG+GGG | + | chr3_1:92785461-92785480 | None:intergenic | 70.0% |
| !! | GTTGGGATGGCGGGGAGGGA+GGG | + | chr3_1:92785462-92785481 | None:intergenic | 70.0% |
| !! | TGTTGGGATGGCGGGGAGGG+AGG | + | chr3_1:92785463-92785482 | None:intergenic | 70.0% |
| GCGGCAGCTTCGCTCCACCT+TGG | + | chr3_1:92786451-92786470 | None:intergenic | 70.0% | |
| TGAAAGGAGGGGGGGGGGGG+GGG | + | chr3_1:92783750-92783769 | None:intergenic | 75.0% | |
| !! | TGGGATGGCGGGGAGGGAGG+GGG | + | chr3_1:92785460-92785479 | None:intergenic | 75.0% |
| ! | AAAGGAGGGGGGGGGGGGGG+GGG | + | chr3_1:92783748-92783767 | None:intergenic | 80.0% |
| ! | GAAAGGAGGGGGGGGGGGGG+GGG | + | chr3_1:92783749-92783768 | None:intergenic | 80.0% |
| !!! | GGGATGGCGGGGAGGGAGGG+GGG | + | chr3_1:92785459-92785478 | None:intergenic | 80.0% |
| ! | AAGGAGGGGGGGGGGGGGGG+GGG | + | chr3_1:92783747-92783766 | None:intergenic | 85.0% |
| ! | AGGAGGGGGGGGGGGGGGGG+GGG | + | chr3_1:92783746-92783765 | None:intergenic | 90.0% |
| ! | GAGGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:92783744-92783763 | None:intergenic | 95.0% |
| ! | GGAGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:92783745-92783764 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 92781788 | 92786588 | 92781788 | ID=Msa0388360;Name=Msa0388360 |
| chr3_1 | mRNA | 92781788 | 92786588 | 92781788 | ID=Msa0388360-mRNA-1;Parent=Msa0388360;Name=Msa0388360-mRNA-1;_AED=0.07;_eAED=0.07;_QI=367|1|1|1|1|1|9|220|560 |
| chr3_1 | exon | 92781788 | 92782427 | 92781788 | ID=Msa0388360-mRNA-1:exon:26134;Parent=Msa0388360-mRNA-1 |
| chr3_1 | exon | 92782985 | 92783306 | 92782985 | ID=Msa0388360-mRNA-1:exon:26133;Parent=Msa0388360-mRNA-1 |
| chr3_1 | exon | 92783564 | 92783635 | 92783564 | ID=Msa0388360-mRNA-1:exon:26132;Parent=Msa0388360-mRNA-1 |
| chr3_1 | exon | 92783740 | 92783776 | 92783740 | ID=Msa0388360-mRNA-1:exon:26131;Parent=Msa0388360-mRNA-1 |
| chr3_1 | exon | 92783878 | 92783936 | 92783878 | ID=Msa0388360-mRNA-1:exon:26130;Parent=Msa0388360-mRNA-1 |
| chr3_1 | exon | 92784021 | 92784305 | 92784021 | ID=Msa0388360-mRNA-1:exon:26129;Parent=Msa0388360-mRNA-1 |
| chr3_1 | exon | 92784743 | 92784921 | 92784743 | ID=Msa0388360-mRNA-1:exon:26128;Parent=Msa0388360-mRNA-1 |
| chr3_1 | exon | 92785693 | 92785874 | 92785693 | ID=Msa0388360-mRNA-1:exon:26127;Parent=Msa0388360-mRNA-1 |
| chr3_1 | exon | 92786095 | 92786588 | 92786095 | ID=Msa0388360-mRNA-1:exon:26126;Parent=Msa0388360-mRNA-1 |
| chr3_1 | five_prime_UTR | 92786222 | 92786588 | 92786222 | ID=Msa0388360-mRNA-1:five_prime_utr;Parent=Msa0388360-mRNA-1 |
| chr3_1 | CDS | 92786095 | 92786221 | 92786095 | ID=Msa0388360-mRNA-1:cds;Parent=Msa0388360-mRNA-1 |
| chr3_1 | CDS | 92785693 | 92785874 | 92785693 | ID=Msa0388360-mRNA-1:cds;Parent=Msa0388360-mRNA-1 |
| chr3_1 | CDS | 92784743 | 92784921 | 92784743 | ID=Msa0388360-mRNA-1:cds;Parent=Msa0388360-mRNA-1 |
| chr3_1 | CDS | 92784021 | 92784305 | 92784021 | ID=Msa0388360-mRNA-1:cds;Parent=Msa0388360-mRNA-1 |
| chr3_1 | CDS | 92783878 | 92783936 | 92783878 | ID=Msa0388360-mRNA-1:cds;Parent=Msa0388360-mRNA-1 |
| chr3_1 | CDS | 92783740 | 92783776 | 92783740 | ID=Msa0388360-mRNA-1:cds;Parent=Msa0388360-mRNA-1 |
| chr3_1 | CDS | 92783564 | 92783635 | 92783564 | ID=Msa0388360-mRNA-1:cds;Parent=Msa0388360-mRNA-1 |
| chr3_1 | CDS | 92782985 | 92783306 | 92782985 | ID=Msa0388360-mRNA-1:cds;Parent=Msa0388360-mRNA-1 |
| chr3_1 | CDS | 92782008 | 92782427 | 92782008 | ID=Msa0388360-mRNA-1:cds;Parent=Msa0388360-mRNA-1 |
| chr3_1 | three_prime_UTR | 92781788 | 92782007 | 92781788 | ID=Msa0388360-mRNA-1:three_prime_utr;Parent=Msa0388360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
