Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0402180 | XP_013459409.1 | 97.660 | 1154 | 27 | 0 | 1 | 1154 | 1 | 1154 | 0.0 | 2338 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0402180 | sp|Q9SX33|ALA9_ARATH | 73.137 | 1154 | 293 | 6 | 6 | 1148 | 13 | 1160 | 0.0 | 1774 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0402180 | A0A072V5J0 | 97.660 | 1154 | 27 | 0 | 1 | 1154 | 1 | 1154 | 0.0 | 2338 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0029240 | Msa0402180 | 0.819691 | 1.016742e-52 | -8.615850e-47 |
Msa0042550 | Msa0402180 | 0.802346 | 5.861465e-49 | -8.615850e-47 |
Msa0215590 | Msa0402180 | 0.800551 | 1.366694e-48 | -8.615850e-47 |
Msa0389390 | Msa0402180 | 0.805407 | 1.354794e-49 | -8.615850e-47 |
Msa0402180 | Msa0443020 | 0.802223 | 6.213489e-49 | -8.615850e-47 |
Msa0402180 | Msa0483800 | 0.992306 | 1.667755e-192 | -8.615850e-47 |
Msa0402180 | Msa0506860 | 0.843022 | 1.808517e-58 | -8.615850e-47 |
Msa0402180 | Msa0532930 | 0.812440 | 4.235967e-51 | -8.615850e-47 |
Msa0402180 | Msa0615010 | 0.814152 | 1.781667e-51 | -8.615850e-47 |
Msa0402180 | Msa0624960 | 0.814645 | 1.386687e-51 | -8.615850e-47 |
Msa0402180 | Msa0661320 | 0.800429 | 1.447323e-48 | -8.615850e-47 |
Msa0402180 | Msa0695870 | 0.803126 | 4.044142e-49 | -8.615850e-47 |
Msa0402180 | Msa0708310 | 0.800133 | 1.662336e-48 | -8.615850e-47 |
Msa0402180 | Msa0825870 | 0.811865 | 5.654278e-51 | -8.615850e-47 |
Msa0402180 | Msa0828240 | 0.801716 | 7.895948e-49 | -8.615850e-47 |
Msa0402180 | Msa0828660 | 0.830447 | 2.922090e-55 | -8.615850e-47 |
Msa0402180 | Msa0865330 | 0.811687 | 6.179626e-51 | -8.615850e-47 |
Msa0402180 | Msa0868160 | 0.802303 | 5.980910e-49 | -8.615850e-47 |
Msa0402180 | Msa0870060 | 0.810009 | 1.426518e-50 | -8.615850e-47 |
Msa0402180 | Msa0935770 | 0.821419 | 4.078354e-53 | -8.615850e-47 |
Msa0402180 | Msa1026940 | 0.805148 | 1.535172e-49 | -8.615850e-47 |
Msa0402180 | Msa1029420 | 0.804076 | 2.569110e-49 | -8.615850e-47 |
Msa0402180 | Msa1038080 | 0.806068 | 9.844920e-50 | -8.615850e-47 |
Msa0402180 | Msa1068280 | 0.807766 | 4.305686e-50 | -8.615850e-47 |
Msa0402180 | Msa1180500 | 0.802396 | 5.722331e-49 | -8.615850e-47 |
Msa0402180 | Msa1185110 | 0.829475 | 5.043409e-55 | -8.615850e-47 |
Msa0402180 | Msa1201200 | 0.810907 | 9.124522e-51 | -8.615850e-47 |
Msa0402180 | Msa1272610 | 0.804696 | 1.908387e-49 | -8.615850e-47 |
Msa0402180 | Msa1310440 | 0.823267 | 1.518815e-53 | -8.615850e-47 |
Msa0402180 | Msa1312520 | 0.802540 | 5.345438e-49 | -8.615850e-47 |
Msa0402180 | Msa1344340 | 0.811759 | 5.961568e-51 | -8.615850e-47 |
Msa0402180 | Msa1446780 | 0.806730 | 7.137472e-50 | -8.615850e-47 |
Msa0402180 | Msa1453320 | 0.801528 | 8.627634e-49 | -8.615850e-47 |
Msa0402180 | Msa1457160 | 0.806186 | 9.294461e-50 | -8.615850e-47 |
Msa0402180 | Msa1458510 | 0.815945 | 7.125337e-52 | -8.615850e-47 |
Msa0402180 | Msa1462360 | 0.807605 | 4.657696e-50 | -8.615850e-47 |
Msa0264830 | Msa0402180 | 0.818279 | 2.129323e-52 | -8.615850e-47 |
Msa0296480 | Msa0402180 | 0.835310 | 1.808112e-56 | -8.615850e-47 |
Msa0302870 | Msa0402180 | 0.805972 | 1.031085e-49 | -8.615850e-47 |
Msa0308460 | Msa0402180 | 0.837043 | 6.561175e-57 | -8.615850e-47 |
Msa0333650 | Msa0402180 | 0.801264 | 9.773850e-49 | -8.615850e-47 |
Msa0334770 | Msa0402180 | 0.816206 | 6.231273e-52 | -8.615850e-47 |
Msa0340340 | Msa0402180 | 0.817573 | 3.075014e-52 | -8.615850e-47 |
Msa0340690 | Msa0402180 | 0.805557 | 1.260029e-49 | -8.615850e-47 |
Msa0340710 | Msa0402180 | 0.812949 | 3.276691e-51 | -8.615850e-47 |
Msa0348550 | Msa0402180 | 0.807412 | 5.119990e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0402180 | MtrunA17_Chr3g0091611 | 97.660 | 1154 | 27 | 0 | 1 | 1154 | 1 | 1154 | 0.0 | 2338 |
Msa0402180 | MtrunA17_Chr8g0368691 | 77.133 | 1172 | 247 | 5 | 2 | 1154 | 5 | 1174 | 0.0 | 1880 |
Msa0402180 | MtrunA17_Chr0c05g0492131 | 76.970 | 1155 | 257 | 7 | 5 | 1154 | 4 | 1154 | 0.0 | 1824 |
Msa0402180 | MtrunA17_Chr4g0062251 | 67.446 | 1155 | 365 | 5 | 2 | 1148 | 5 | 1156 | 0.0 | 1635 |
Msa0402180 | MtrunA17_Chr6g0450601 | 62.339 | 1163 | 418 | 7 | 4 | 1149 | 7 | 1166 | 0.0 | 1516 |
Msa0402180 | MtrunA17_Chr2g0329991 | 55.076 | 1182 | 483 | 7 | 5 | 1152 | 10 | 1177 | 0.0 | 1341 |
Msa0402180 | MtrunA17_Chr8g0342811 | 53.547 | 1184 | 499 | 7 | 5 | 1152 | 9 | 1177 | 0.0 | 1310 |
Msa0402180 | MtrunA17_Chr8g0363911 | 46.050 | 1114 | 577 | 13 | 36 | 1141 | 44 | 1141 | 0.0 | 978 |
Msa0402180 | MtrunA17_Chr5g0415271 | 45.357 | 1120 | 578 | 14 | 35 | 1141 | 23 | 1121 | 0.0 | 974 |
Msa0402180 | MtrunA17_Chr7g0244991 | 37.284 | 1156 | 639 | 24 | 28 | 1134 | 135 | 1253 | 0.0 | 697 |
Msa0402180 | MtrunA17_Chr3g0078371 | 36.568 | 1113 | 647 | 16 | 31 | 1134 | 116 | 1178 | 0.0 | 664 |
Msa0402180 | MtrunA17_Chr8g0355251 | 36.937 | 1110 | 640 | 22 | 41 | 1134 | 78 | 1143 | 0.0 | 653 |
Msa0402180 | MtrunA17_Chr2g0324791 | 31.839 | 1093 | 638 | 28 | 45 | 1124 | 8 | 1006 | 1.65e-166 | 522 |
Msa0402180 | MtrunA17_Chr8g0346461 | 25.084 | 594 | 324 | 20 | 403 | 972 | 347 | 843 | 3.53e-22 | 103 |
Msa0402180 | MtrunA17_Chr1g0173111 | 28.182 | 220 | 117 | 7 | 554 | 760 | 521 | 712 | 7.69e-14 | 76.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0402180 | AT1G68710.2 | 73.137 | 1154 | 293 | 6 | 6 | 1148 | 13 | 1160 | 0.0 | 1774 |
Msa0402180 | AT1G68710.1 | 73.137 | 1154 | 293 | 6 | 6 | 1148 | 13 | 1160 | 0.0 | 1774 |
Msa0402180 | AT1G68710.3 | 71.525 | 1180 | 293 | 7 | 6 | 1148 | 13 | 1186 | 0.0 | 1761 |
Msa0402180 | AT1G26130.2 | 71.032 | 1153 | 324 | 5 | 2 | 1148 | 9 | 1157 | 0.0 | 1723 |
Msa0402180 | AT1G26130.4 | 71.032 | 1153 | 324 | 5 | 2 | 1148 | 9 | 1157 | 0.0 | 1723 |
Msa0402180 | AT1G26130.3 | 71.032 | 1153 | 324 | 5 | 2 | 1148 | 9 | 1157 | 0.0 | 1723 |
Msa0402180 | AT1G26130.1 | 71.032 | 1153 | 323 | 6 | 2 | 1148 | 9 | 1156 | 0.0 | 1719 |
Msa0402180 | AT3G25610.1 | 70.645 | 1148 | 327 | 8 | 6 | 1147 | 11 | 1154 | 0.0 | 1714 |
Msa0402180 | AT1G13210.1 | 69.757 | 1154 | 338 | 7 | 2 | 1147 | 5 | 1155 | 0.0 | 1679 |
Msa0402180 | AT3G27870.1 | 63.423 | 1151 | 397 | 8 | 2 | 1138 | 5 | 1145 | 0.0 | 1554 |
Msa0402180 | AT3G27870.2 | 64.859 | 996 | 326 | 8 | 2 | 983 | 5 | 990 | 0.0 | 1360 |
Msa0402180 | AT3G27870.3 | 64.033 | 962 | 324 | 6 | 191 | 1138 | 1 | 954 | 0.0 | 1325 |
Msa0402180 | AT3G13900.1 | 54.206 | 1177 | 483 | 8 | 9 | 1145 | 13 | 1173 | 0.0 | 1321 |
Msa0402180 | AT1G17500.2 | 54.795 | 1168 | 493 | 7 | 5 | 1152 | 9 | 1161 | 0.0 | 1319 |
Msa0402180 | AT1G17500.1 | 54.795 | 1168 | 493 | 7 | 5 | 1152 | 9 | 1161 | 0.0 | 1319 |
Msa0402180 | AT1G72700.1 | 53.774 | 1179 | 500 | 8 | 5 | 1152 | 9 | 1173 | 0.0 | 1309 |
Msa0402180 | AT1G72700.3 | 53.774 | 1179 | 500 | 8 | 5 | 1152 | 9 | 1173 | 0.0 | 1309 |
Msa0402180 | AT1G72700.2 | 53.774 | 1179 | 500 | 8 | 5 | 1152 | 9 | 1173 | 0.0 | 1309 |
Msa0402180 | AT1G54280.2 | 53.486 | 1176 | 495 | 6 | 9 | 1145 | 13 | 1175 | 0.0 | 1303 |
Msa0402180 | AT1G54280.3 | 53.486 | 1176 | 495 | 6 | 9 | 1145 | 13 | 1175 | 0.0 | 1303 |
Msa0402180 | AT1G54280.1 | 53.486 | 1176 | 495 | 6 | 9 | 1145 | 13 | 1175 | 0.0 | 1303 |
Msa0402180 | AT3G13900.2 | 56.080 | 954 | 361 | 9 | 9 | 920 | 13 | 950 | 0.0 | 1078 |
Msa0402180 | AT3G13900.3 | 55.459 | 916 | 352 | 8 | 9 | 884 | 13 | 912 | 0.0 | 1018 |
Msa0402180 | AT1G59820.1 | 45.013 | 1113 | 585 | 14 | 36 | 1141 | 36 | 1128 | 0.0 | 959 |
Msa0402180 | AT5G04930.1 | 36.592 | 1115 | 615 | 25 | 35 | 1124 | 67 | 1114 | 0.0 | 648 |
Msa0402180 | AT5G44240.2 | 32.472 | 1084 | 623 | 30 | 55 | 1124 | 18 | 1006 | 9.31e-166 | 520 |
Msa0402180 | AT5G44240.1 | 32.472 | 1084 | 623 | 30 | 55 | 1124 | 50 | 1038 | 4.95e-165 | 520 |
Msa0402180 | AT4G00900.2 | 24.831 | 592 | 325 | 18 | 403 | 972 | 346 | 839 | 8.85e-22 | 102 |
Msa0402180 | AT4G00900.1 | 24.831 | 592 | 325 | 18 | 403 | 972 | 346 | 839 | 8.85e-22 | 102 |
Msa0402180 | AT1G07670.2 | 25.386 | 583 | 310 | 23 | 403 | 966 | 361 | 837 | 1.02e-18 | 92.8 |
Msa0402180 | AT1G07670.1 | 25.386 | 583 | 310 | 23 | 403 | 966 | 361 | 837 | 1.02e-18 | 92.8 |
Msa0402180 | AT3G18700.1 | 54.667 | 75 | 29 | 3 | 936 | 1007 | 5 | 77 | 2.42e-13 | 70.1 |
Msa0402180 | AT1G07810.1 | 26.629 | 353 | 192 | 14 | 403 | 736 | 361 | 665 | 5.69e-11 | 67.8 |
Find 242 sgRNAs with CRISPR-Local
Find 419 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTAATGCTTGAATTTC+AGG | 0.092546 | 3_2:-30102967 | None:intergenic |
TCAAAACTAATTTATTTATT+TGG | 0.107111 | 3_2:-30106079 | None:intergenic |
TTCAAACTCCCTTCCATTAA+TGG | 0.130822 | 3_2:-30102374 | None:intergenic |
AAGATTATCTACTTCTTATT+TGG | 0.153322 | 3_2:+30101151 | Msa0402180:CDS |
ATGGAGTTGGATCCGGTTTC+TGG | 0.155446 | 3_2:+30101934 | Msa0402180:CDS |
CGCTTCCTGCCATTGCCCTT+GGG | 0.198332 | 3_2:+30104503 | Msa0402180:CDS |
GTCTAAGGTGGGGTAGGTTT+TGG | 0.206214 | 3_2:+30099124 | Msa0402180:five_prime_UTR |
TTTGGGGTTCTATTGCTATT+TGG | 0.221327 | 3_2:+30105618 | Msa0402180:CDS |
TATTTATTCGTGTTTGCTTA+TGG | 0.221522 | 3_2:+30105641 | Msa0402180:CDS |
GGTACAACATGTTGCCATTT+GGG | 0.235702 | 3_2:+30105601 | Msa0402180:CDS |
CAGAAAGGATTGTGTCAATT+TGG | 0.237613 | 3_2:-30101504 | None:intergenic |
TTTATTGGATCTATTCTCTT+TGG | 0.253050 | 3_2:+30101193 | Msa0402180:CDS |
TTGCTCCATCGGCTTCCTTT+TGG | 0.253515 | 3_2:+30105717 | Msa0402180:CDS |
TTTGAAAGGCTTGCCATTAA+TGG | 0.262915 | 3_2:+30102361 | Msa0402180:CDS |
CACAAGCTAGAATTAAGATA+TGG | 0.263078 | 3_2:+30102749 | Msa0402180:CDS |
AAATATTGAAAAGAAATAAA+AGG | 0.263398 | 3_2:-30098958 | None:intergenic |
TTGGAAGACAAGGGTATTCT+AGG | 0.272681 | 3_2:+30099329 | Msa0402180:CDS |
ACTCAAGTAACAAAATTTAT+AGG | 0.273019 | 3_2:-30099032 | None:intergenic |
TTCATCAAATGTTCGGTTGC+TGG | 0.279773 | 3_2:+30101562 | Msa0402180:CDS |
TACATGGACATTGGTGTTAC+AGG | 0.280817 | 3_2:+30103983 | Msa0402180:CDS |
AGTCATTGTTTGAGCAGTTT+AGG | 0.281595 | 3_2:+30099458 | Msa0402180:CDS |
GAATTCGGCGCCACCTAAAT+AGG | 0.284721 | 3_2:-30105388 | None:intergenic |
AACTGGAATCAATTGATATC+AGG | 0.289431 | 3_2:+30101641 | Msa0402180:CDS |
AATTGCACAATTCCGGTATC+TGG | 0.297086 | 3_2:+30103945 | Msa0402180:CDS |
TGCTACTTTCACTTTGATTC+CGG | 0.308090 | 3_2:+30098712 | Msa0402180:five_prime_UTR |
TTCGGAGCAGTCATCTTTAC+TGG | 0.309047 | 3_2:+30101055 | Msa0402180:CDS |
CCATGTATACTTGTGTCGTT+TGG | 0.311621 | 3_2:+30105534 | Msa0402180:CDS |
TCGCTTCCTGCCATTGCCCT+TGG | 0.312300 | 3_2:+30104502 | Msa0402180:CDS |
AATTTCTATTTCCTTGTTGC+TGG | 0.314481 | 3_2:+30099490 | Msa0402180:CDS |
GATTAATGAATATGCTTTGA+AGG | 0.316781 | 3_2:-30101405 | None:intergenic |
AAAGAATAATGAACGGAAAC+TGG | 0.319383 | 3_2:+30101713 | Msa0402180:CDS |
GGACATTCTGTACACCTTCT+TGG | 0.324279 | 3_2:-30105367 | None:intergenic |
GCAGAAGAAGAAAATTATTA+TGG | 0.331068 | 3_2:-30105441 | None:intergenic |
GGTACAATGGATGAGGTATA+AGG | 0.331412 | 3_2:+30105832 | Msa0402180:CDS |
GTAGAAGACAAGCTCCAAAA+TGG | 0.334486 | 3_2:+30102607 | Msa0402180:CDS |
GTACAAATAACACAACAATT+TGG | 0.334815 | 3_2:+30098750 | Msa0402180:five_prime_UTR |
CTTGTATTTCTCAATAGAAT+TGG | 0.336216 | 3_2:+30101375 | Msa0402180:CDS |
CCTGTTTCCTCGTCCACTTC+CGG | 0.343161 | 3_2:-30101805 | None:intergenic |
CGTAATACAGACTTCATATT+CGG | 0.344767 | 3_2:+30101037 | Msa0402180:CDS |
AAAGAGTACAAATTTGCATT+TGG | 0.346977 | 3_2:-30100938 | None:intergenic |
TTTGAAGCTAAAACAAGGTT+TGG | 0.350750 | 3_2:+30100847 | Msa0402180:CDS |
GTGTACAGAATGTCCTATTT+AGG | 0.351914 | 3_2:+30105375 | Msa0402180:CDS |
GAAGAAGTTGTATAGCATTA+AGG | 0.356254 | 3_2:-30101341 | None:intergenic |
ACAATCCTTTCTGATAAAAC+TGG | 0.357068 | 3_2:+30101514 | Msa0402180:CDS |
CGTTCTCGTCAAAGGCTTGA+AGG | 0.358215 | 3_2:-30105478 | None:intergenic |
TCGGTTGCTGGGGTAGCTTA+TGG | 0.358460 | 3_2:+30101574 | Msa0402180:CDS |
CAACAAGATAGATTTGAATC+AGG | 0.359396 | 3_2:+30099370 | Msa0402180:CDS |
GAATGCTCTCTCTTAAACTT+TGG | 0.359897 | 3_2:-30099301 | None:intergenic |
CTTCCTTTAGCTGTTATAGT+TGG | 0.363690 | 3_2:+30099562 | Msa0402180:CDS |
GCAGACTGCATCTTCGTAAC+TGG | 0.363861 | 3_2:-30100789 | None:intergenic |
TCACAAAAGTTAGTAGTTGT+TGG | 0.368870 | 3_2:-30105931 | None:intergenic |
TGACAGCAGCTTTGAAATCA+TGG | 0.368958 | 3_2:-30100904 | None:intergenic |
TGGTACAACATGTTGCCATT+TGG | 0.369553 | 3_2:+30105600 | Msa0402180:CDS |
ATATTGCAATTGCACAATTC+CGG | 0.375437 | 3_2:+30103938 | Msa0402180:CDS |
CTTTGATTCCGGCAATTTGT+AGG | 0.379016 | 3_2:+30098723 | Msa0402180:five_prime_UTR |
ATAGCACTAACAGCAGTATA+AGG | 0.380016 | 3_2:-30099538 | None:intergenic |
TTCTAAGTTGGATGCTCAAC+GGG | 0.380465 | 3_2:+30105408 | Msa0402180:CDS |
TTCTACAAGAATATTACATT+TGG | 0.389391 | 3_2:+30104385 | Msa0402180:CDS |
TTCTTCTGCACTAAAGCAAT+AGG | 0.389424 | 3_2:+30105455 | Msa0402180:CDS |
CGCTGAGACTCTTGCTCCAT+CGG | 0.392380 | 3_2:+30105706 | Msa0402180:CDS |
ATAAAATTAAAACCTTTGAT+TGG | 0.392819 | 3_2:-30101685 | None:intergenic |
TGAGCATCCAACTTAGAATT+CGG | 0.402885 | 3_2:-30105403 | None:intergenic |
CATACCAGAGCCTTCTGCTT+TGG | 0.404281 | 3_2:-30103359 | None:intergenic |
TTCATTCAAGTTTGAAGTAC+GGG | 0.405582 | 3_2:-30101473 | None:intergenic |
ATCACAAATGCTGCTTCATC+AGG | 0.408000 | 3_2:-30101853 | None:intergenic |
AACTTTGACTTGCAACTCAA+TGG | 0.412940 | 3_2:+30101537 | Msa0402180:CDS |
CAAAGGTTTCTAGTTGAGAA+TGG | 0.413700 | 3_2:+30105991 | Msa0402180:three_prime_UTR |
TCAACCTCATTGCCAGAAAC+CGG | 0.415131 | 3_2:-30101946 | None:intergenic |
CCGGAAGTGGACGAGGAAAC+AGG | 0.415407 | 3_2:+30101805 | Msa0402180:CDS |
TATGACAAACAGACAATAAA+CGG | 0.417642 | 3_2:-30101774 | None:intergenic |
AAAGAGAATAGATCCAATAA+AGG | 0.418393 | 3_2:-30101191 | None:intergenic |
TCATCAAATGTTCGGTTGCT+GGG | 0.418614 | 3_2:+30101563 | Msa0402180:CDS |
AATATTATACCCAATGTTGA+TGG | 0.420341 | 3_2:-30102800 | None:intergenic |
AAGAAAATGGTGGAATCATC+TGG | 0.425560 | 3_2:-30101271 | None:intergenic |
ATCAATGATGGAGTTGGATC+CGG | 0.426178 | 3_2:+30101927 | Msa0402180:CDS |
TTTCACTCTATTCTTATATG+AGG | 0.431318 | 3_2:+30104408 | Msa0402180:CDS |
ACAAGCTAGAATTAAGATAT+GGG | 0.433537 | 3_2:+30102750 | Msa0402180:CDS |
AAACTGCTTTCTGCATCTAA+AGG | 0.437114 | 3_2:+30103206 | Msa0402180:CDS |
CTCATAAAAGGTTACTAGAT+TGG | 0.437606 | 3_2:+30103675 | Msa0402180:intron |
TAGAAGACAAGCTCCAAAAT+GGG | 0.438213 | 3_2:+30102608 | Msa0402180:CDS |
AGAAGAGTTATATGTCATAA+AGG | 0.439780 | 3_2:+30100662 | Msa0402180:CDS |
AAGAGAGAGCATTCACAGAT+TGG | 0.439786 | 3_2:+30099310 | Msa0402180:CDS |
ATTATGCTGATAATTCTGTT+AGG | 0.442793 | 3_2:+30099401 | Msa0402180:CDS |
CATTGGTAGTAGGTCGGAAC+TGG | 0.447064 | 3_2:+30101624 | Msa0402180:CDS |
CATGTATACTTGTGTCGTTT+GGG | 0.447842 | 3_2:+30105535 | Msa0402180:CDS |
AACTGCTTTCTGCATCTAAA+GGG | 0.455917 | 3_2:+30103207 | Msa0402180:CDS |
CATGCAGTGTCATGTTTGAA+AGG | 0.455976 | 3_2:+30102347 | Msa0402180:intron |
TAATATGTACTATGAAGAAC+TGG | 0.459205 | 3_2:+30101435 | Msa0402180:CDS |
AATGGAGTTCATCAAATGTT+CGG | 0.463379 | 3_2:+30101555 | Msa0402180:CDS |
CTCTCCTCCCTAGGCCGTCA+TGG | 0.464414 | 3_2:+30103909 | Msa0402180:intron |
GCAGTTGTTGAAAAGCTTGA+AGG | 0.465063 | 3_2:-30105671 | None:intergenic |
TGTTATAGTTGGTGCAACTA+TGG | 0.466414 | 3_2:+30099573 | Msa0402180:CDS |
AGAAGCTGCTGAGGAGAAAG+TGG | 0.468812 | 3_2:-30100995 | None:intergenic |
TCAGAACAGTTTATCAATGA+TGG | 0.468858 | 3_2:+30101915 | Msa0402180:CDS |
GAGAGGAATCTAATCCTTCT+CGG | 0.469754 | 3_2:+30102574 | Msa0402180:CDS |
ACACCTTCTTGGTACAAGAT+AGG | 0.470513 | 3_2:-30105356 | None:intergenic |
AAAGGTTTCTAGTTGAGAAT+GGG | 0.471062 | 3_2:+30105992 | Msa0402180:three_prime_UTR |
AGTAACTTCTTCATTAAATG+AGG | 0.471404 | 3_2:+30100871 | Msa0402180:CDS |
ATTAGTTCTGCAGGATATTG+AGG | 0.471702 | 3_2:+30100631 | Msa0402180:intron |
GAAAGCAGTAATAGGTCGGC+AGG | 0.473145 | 3_2:-30100764 | None:intergenic |
GAGGTGTATGCATCATTCTC+TGG | 0.475622 | 3_2:+30104427 | Msa0402180:CDS |
AACTGGACGAAAGCAGTAAT+AGG | 0.476044 | 3_2:-30100772 | None:intergenic |
TCATACTGCCATGCCGGAAG+TGG | 0.477207 | 3_2:+30101792 | Msa0402180:CDS |
CTTCATTCAAGTTTGAAGTA+CGG | 0.477834 | 3_2:-30101474 | None:intergenic |
CTACGTTGAAACGATGAACT+TGG | 0.481235 | 3_2:+30100811 | Msa0402180:CDS |
TGCTCTGTAAAGGCGCTGAC+AGG | 0.482856 | 3_2:+30102238 | Msa0402180:CDS |
GTACAATGGATGAGGTATAA+GGG | 0.483970 | 3_2:+30105833 | Msa0402180:CDS |
GAAGTAATCTTTCCAGATAC+CGG | 0.489297 | 3_2:-30103957 | None:intergenic |
TGGAGACTGCCATCAACATT+GGG | 0.499022 | 3_2:+30102791 | Msa0402180:CDS |
AATATTGAAAAGAAATAAAA+GGG | 0.501003 | 3_2:-30098957 | None:intergenic |
ATGGAGACTGCCATCAACAT+TGG | 0.501775 | 3_2:+30102790 | Msa0402180:CDS |
TGTTTCCTATGCATCATGAA+AGG | 0.506304 | 3_2:+30105810 | Msa0402180:CDS |
TGCCATGCCGGAAGTGGACG+AGG | 0.510510 | 3_2:+30101798 | Msa0402180:CDS |
ATCGCCAAAGCAGAAGGCTC+TGG | 0.513485 | 3_2:+30103355 | Msa0402180:CDS |
GGTGGCGCCGAATTCTAAGT+TGG | 0.514230 | 3_2:+30105396 | Msa0402180:CDS |
TTCCTCGTCCACTTCCGGCA+TGG | 0.515006 | 3_2:-30101800 | None:intergenic |
GAGCTTGTCTTCTACAGCAG+TGG | 0.515492 | 3_2:-30102599 | None:intergenic |
CTATGAAGAACTGGACAAAC+CGG | 0.515910 | 3_2:+30101444 | Msa0402180:CDS |
GCTTCCTGCCATTGCCCTTG+GGG | 0.517141 | 3_2:+30104504 | Msa0402180:CDS |
GTTTCCTATGCATCATGAAA+GGG | 0.517453 | 3_2:+30105811 | Msa0402180:CDS |
CATTGTTTGAGCAGTTTAGG+AGG | 0.518268 | 3_2:+30099461 | Msa0402180:CDS |
GTTACTAGATTGGTCAAAGA+AGG | 0.518896 | 3_2:+30103685 | Msa0402180:CDS |
TATTGAGAAATACAAGGAGA+TGG | 0.520310 | 3_2:-30101368 | None:intergenic |
GCACCAACTATAACAGCTAA+AGG | 0.520410 | 3_2:-30099565 | None:intergenic |
GCTGGGGTAGCTTATGGCCG+TGG | 0.520696 | 3_2:+30101580 | Msa0402180:CDS |
CAGTTTATCAATGATGGAGT+TGG | 0.523883 | 3_2:+30101921 | Msa0402180:CDS |
GAGCAAAATCGAGATGAAGA+TGG | 0.524645 | 3_2:+30101126 | Msa0402180:CDS |
AACTAATGATATCTAGAAGA+AGG | 0.526497 | 3_2:-30098856 | None:intergenic |
CAAGAAGCTGATGTAGGTGT+TGG | 0.531998 | 3_2:+30103763 | Msa0402180:CDS |
TGCAATATCACTAGCCATGA+CGG | 0.534715 | 3_2:-30103923 | None:intergenic |
TCTCGGAGAAGAAGCTGCTG+AGG | 0.535606 | 3_2:-30101004 | None:intergenic |
ACAACATTAGCCATCGGTGA+TGG | 0.535671 | 3_2:+30103718 | Msa0402180:CDS |
GTCACTTGTTTATGCTCTAG+AGG | 0.536426 | 3_2:+30103268 | Msa0402180:CDS |
GAAGGATGGAGGAGACAAGA+TGG | 0.538054 | 3_2:+30102987 | Msa0402180:CDS |
CCAAACGACACAAGTATACA+TGG | 0.538726 | 3_2:-30105534 | None:intergenic |
CAGTGGTGTTGAAGGAATGC+AGG | 0.539214 | 3_2:+30103789 | Msa0402180:CDS |
AGTACCTAGCAGATACATCT+TGG | 0.539728 | 3_2:-30104534 | None:intergenic |
TTTCCTATCTTGTACCAAGA+AGG | 0.539909 | 3_2:+30105353 | Msa0402180:CDS |
ACAACGGAATTATGAAAAGA+TGG | 0.539970 | 3_2:+30101239 | Msa0402180:CDS |
TTTGAAGTACGGGCAAGAGC+CGG | 0.543120 | 3_2:-30101463 | None:intergenic |
CTTCAAGCCTTTGACGAGAA+CGG | 0.543588 | 3_2:+30105479 | Msa0402180:CDS |
GTCAAAGACCCCAAGGGCAA+TGG | 0.544360 | 3_2:-30104512 | None:intergenic |
AATAGCAATAGAACCCCAAA+TGG | 0.546308 | 3_2:-30105615 | None:intergenic |
AAAGGCTTGCCATTAATGGA+AGG | 0.548014 | 3_2:+30102365 | Msa0402180:CDS |
TGTACCCTTTCATGATGCAT+AGG | 0.548249 | 3_2:-30105815 | None:intergenic |
TTTGAATGATCTTACCATTG+TGG | 0.549643 | 3_2:-30104013 | None:intergenic |
AATCAATGATTCATGATCCA+TGG | 0.550551 | 3_2:-30102530 | None:intergenic |
GTACAACATGTTGCCATTTG+GGG | 0.550990 | 3_2:+30105602 | Msa0402180:CDS |
GTTATATGTCATAAAGGTGG+TGG | 0.551348 | 3_2:+30100668 | Msa0402180:CDS |
GTTGGAATCAGTGGTGTTGA+AGG | 0.551752 | 3_2:+30103781 | Msa0402180:CDS |
TACTTCTTGTACATGGACAT+TGG | 0.552282 | 3_2:+30103974 | Msa0402180:CDS |
TTCTTCATCAAGTTCACGAT+AGG | 0.552409 | 3_2:-30102458 | None:intergenic |
GGATCATGAATCATTGATTG+AGG | 0.552625 | 3_2:+30102534 | Msa0402180:CDS |
ACAGAGGTTGAGCAAGCCAT+TGG | 0.552734 | 3_2:+30101607 | Msa0402180:CDS |
AAATAATGTGAGAATCCAAA+AGG | 0.553021 | 3_2:-30105732 | None:intergenic |
TTTCTGGCAATGAGGTTGAA+AGG | 0.557011 | 3_2:+30101950 | Msa0402180:CDS |
TGGAAGACAAGGGTATTCTA+GGG | 0.557902 | 3_2:+30099330 | Msa0402180:CDS |
AACTGCTCAAACAATGACTT+AGG | 0.558931 | 3_2:-30099454 | None:intergenic |
ACTGGAATCAATTGATATCA+GGG | 0.559607 | 3_2:+30101642 | Msa0402180:CDS |
GAAAGATTACTTCTTGTACA+TGG | 0.560318 | 3_2:+30103967 | Msa0402180:CDS |
TTTAGGATCAAAGAAAATGG+TGG | 0.560736 | 3_2:-30101281 | None:intergenic |
GACAGCCTGCATACAATGAC+TGG | 0.560825 | 3_2:+30104449 | Msa0402180:CDS |
TCGCTCATCGCCAAAGCAGA+AGG | 0.562440 | 3_2:+30103349 | Msa0402180:CDS |
TCTTGTCGCTTGCTTCGACA+AGG | 0.562978 | 3_2:+30102913 | Msa0402180:CDS |
ATCGTGGAGCACGAAAAGTA+TGG | 0.564066 | 3_2:-30105776 | None:intergenic |
ATTGAGAAATACAAGGAGAT+GGG | 0.564117 | 3_2:-30101367 | None:intergenic |
AAGACCCCAAGGGCAATGGC+AGG | 0.565148 | 3_2:-30104508 | None:intergenic |
AAATATAGTGAAGATAAAGA+AGG | 0.572990 | 3_2:+30100730 | Msa0402180:CDS |
CAGTTCCGACCTACTACCAA+TGG | 0.573787 | 3_2:-30101623 | None:intergenic |
AGATTGGTCAAAGAAGGAAC+TGG | 0.574066 | 3_2:+30103691 | Msa0402180:CDS |
ATTCTAAGTTGGATGCTCAA+CGG | 0.574175 | 3_2:+30105407 | Msa0402180:CDS |
CATTCACAGATTGGAAGACA+AGG | 0.574518 | 3_2:+30099319 | Msa0402180:CDS |
GTGATAGTTAAAGATGAAGA+CGG | 0.574581 | 3_2:+30102204 | Msa0402180:CDS |
TTGAGCAAGCCATTGGTAGT+AGG | 0.576117 | 3_2:+30101614 | Msa0402180:CDS |
ATGAAAGGGTACAATGGATG+AGG | 0.576394 | 3_2:+30105825 | Msa0402180:CDS |
CAATTCTATTGAGAAATACA+AGG | 0.576444 | 3_2:-30101374 | None:intergenic |
CTACAGCAGTGGCACCGAGA+AGG | 0.578850 | 3_2:-30102588 | None:intergenic |
AAATATCAGAAAAGATTGAG+AGG | 0.579299 | 3_2:+30102557 | Msa0402180:CDS |
TGATAGTTAAAGATGAAGAC+GGG | 0.581808 | 3_2:+30102205 | Msa0402180:CDS |
ATTCAAGCATTAGAGAAGGA+TGG | 0.585019 | 3_2:+30102973 | Msa0402180:CDS |
GCATTTGCTCTGATAATCGA+TGG | 0.585989 | 3_2:+30103242 | Msa0402180:CDS |
GTGTATCTTCAGATATCTGA+AGG | 0.586350 | 3_2:+30103179 | Msa0402180:CDS |
CGTGCTCCACGATTAAAATG+TGG | 0.587780 | 3_2:+30105786 | Msa0402180:CDS |
ATGCTTCAAGAAGCTGATGT+AGG | 0.588681 | 3_2:+30103757 | Msa0402180:CDS |
ACCGCTGGAAAAGACATACT+AGG | 0.589669 | 3_2:+30105506 | Msa0402180:CDS |
GTGATTGCTGCAAGAGAAGT+GGG | 0.590048 | 3_2:+30101871 | Msa0402180:CDS |
ACTAAACGTGACTTGAACAA+CGG | 0.595592 | 3_2:+30101223 | Msa0402180:CDS |
TTGGGTTGTAAACCTACAGA+TGG | 0.595777 | 3_2:+30105553 | Msa0402180:CDS |
GATCGAAAAGAACCAATCAA+AGG | 0.596365 | 3_2:+30101673 | Msa0402180:CDS |
GTGAGTGAATATGCTGATGC+AGG | 0.598689 | 3_2:+30102415 | Msa0402180:CDS |
AGTTGGTGCAACTATGGTGA+AGG | 0.600945 | 3_2:+30099579 | Msa0402180:CDS |
TGAAATTCAAGCATTAGAGA+AGG | 0.601663 | 3_2:+30102969 | Msa0402180:CDS |
ATTGTTTGAGCAGTTTAGGA+GGG | 0.602269 | 3_2:+30099462 | Msa0402180:CDS |
CATCAAATGTTCGGTTGCTG+GGG | 0.604157 | 3_2:+30101564 | Msa0402180:CDS |
ATCTGCTAGGTACTGCGTCA+AGG | 0.606063 | 3_2:+30104543 | Msa0402180:CDS |
ATAGATGAAAGAATAATGAA+CGG | 0.608033 | 3_2:+30101706 | Msa0402180:CDS |
AGAATCCAAAAGGAAGCCGA+TGG | 0.608817 | 3_2:-30105722 | None:intergenic |
AAGGCTTGCCATTAATGGAA+GGG | 0.610755 | 3_2:+30102366 | Msa0402180:CDS |
GCACAGCGAGCGCCATCTGT+AGG | 0.610848 | 3_2:-30105565 | None:intergenic |
GTCATTAGCTCCATCACCGA+TGG | 0.611715 | 3_2:-30103728 | None:intergenic |
TTGACCAAGATGTATCTGCT+AGG | 0.614128 | 3_2:+30104530 | Msa0402180:CDS |
TGCATCATGAAAGGGTACAA+TGG | 0.615628 | 3_2:+30105819 | Msa0402180:CDS |
AGAGTTATATGTCATAAAGG+TGG | 0.616344 | 3_2:+30100665 | Msa0402180:CDS |
TGTGATTGCTGCAAGAGAAG+TGG | 0.617623 | 3_2:+30101870 | Msa0402180:CDS |
CGGTGATGGAGCTAATGACG+TGG | 0.621362 | 3_2:+30103732 | Msa0402180:CDS |
GAGTGGAAGAATCTCAAGGT+AGG | 0.622591 | 3_2:+30100707 | Msa0402180:CDS |
ACAAATTTGAAGCTAAAACA+AGG | 0.623681 | 3_2:+30100842 | Msa0402180:CDS |
TACAGAATGTCCTATTTAGG+TGG | 0.628770 | 3_2:+30105378 | Msa0402180:CDS |
AGACAAGATGGCTATCATGA+AGG | 0.630297 | 3_2:+30102999 | Msa0402180:CDS |
ATGTAAAGGAAGTATAACAA+AGG | 0.632841 | 3_2:+30105974 | Msa0402180:three_prime_UTR |
GGACGAAAGCAGTAATAGGT+CGG | 0.635029 | 3_2:-30100768 | None:intergenic |
TGTTTGTCATACTGCCATGC+CGG | 0.635666 | 3_2:+30101786 | Msa0402180:CDS |
GATTCTCACATTATTTGTCG+CGG | 0.636103 | 3_2:+30105739 | Msa0402180:CDS |
CGCTGTGCGATACTTCACCT+TGG | 0.640777 | 3_2:+30105580 | Msa0402180:CDS |
GATGTAGGTGTTGGAATCAG+TGG | 0.648525 | 3_2:+30103772 | Msa0402180:CDS |
GCAAGCCATTGGTAGTAGGT+CGG | 0.650019 | 3_2:+30101618 | Msa0402180:CDS |
AAGCTAAGATACCAGCAACA+AGG | 0.652050 | 3_2:-30099501 | None:intergenic |
TACGGAGTGGAAGAATCTCA+AGG | 0.656618 | 3_2:+30100703 | Msa0402180:CDS |
AGCGAAAATTACAGTCACCA+TGG | 0.656927 | 3_2:+30102513 | Msa0402180:CDS |
CATCTTGGTCAAAGACCCCA+AGG | 0.658958 | 3_2:-30104519 | None:intergenic |
CAAGCATTAGAGAAGGATGG+AGG | 0.659207 | 3_2:+30102976 | Msa0402180:CDS |
TCAAACTTGAATGAAGAACT+CGG | 0.661344 | 3_2:+30101481 | Msa0402180:CDS |
GGATCCGGTTTCTGGCAATG+AGG | 0.662297 | 3_2:+30101942 | Msa0402180:CDS |
GTTGAAACGATGAACTTGGA+TGG | 0.664384 | 3_2:+30100815 | Msa0402180:CDS |
GGTAAAACAACATTAGCCAT+CGG | 0.664569 | 3_2:+30103712 | Msa0402180:CDS |
CAGAGCAAATGCTTGCTGAG+AGG | 0.665647 | 3_2:-30103231 | None:intergenic |
AGAAGACAAGCTCCAAAATG+GGG | 0.671624 | 3_2:+30102609 | Msa0402180:CDS |
CTTTACTGGTCACGACACGA+AGG | 0.680986 | 3_2:+30101069 | Msa0402180:CDS |
GGTGAAGAAAAGTAGAAACA+TGG | 0.686340 | 3_2:-30098829 | None:intergenic |
ATGGACATTGGTGTTACAGG+AGG | 0.686829 | 3_2:+30103986 | Msa0402180:CDS |
AAAGCAGTAATAGGTCGGCA+GGG | 0.688009 | 3_2:-30100763 | None:intergenic |
GGTGATGGAGCTAATGACGT+GGG | 0.688269 | 3_2:+30103733 | Msa0402180:CDS |
TAGGGAAGATAAAATCTCAG+TGG | 0.690156 | 3_2:+30099184 | Msa0402180:five_prime_UTR |
TGATATCTAGAAGAAGGACG+CGG | 0.694317 | 3_2:-30098850 | None:intergenic |
GGTGCAACTATGGTGAAGGA+AGG | 0.698242 | 3_2:+30099583 | Msa0402180:CDS |
AATGGCAACATGTTGTACCA+AGG | 0.698501 | 3_2:-30105597 | None:intergenic |
TTCTGTATAACATCTGCACG+AGG | 0.698773 | 3_2:-30101745 | None:intergenic |
GCTCAACCTCTGTGACACCA+CGG | 0.705887 | 3_2:-30101597 | None:intergenic |
ATTCACAGATTGGAAGACAA+GGG | 0.715792 | 3_2:+30099320 | Msa0402180:CDS |
TTACAGGAGGATGTCCACAA+TGG | 0.740764 | 3_2:+30103999 | Msa0402180:CDS |
ATCTTGGTCAAAGACCCCAA+GGG | 0.742412 | 3_2:-30104518 | None:intergenic |
TTATGGCCGTGGTGTCACAG+AGG | 0.763255 | 3_2:+30101591 | Msa0402180:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATTGAAAAGAAATAAAA+GGG | - | chr3_2:30098960-30098979 | None:intergenic | 10.0% |
!! | AAATATTGAAAAGAAATAAA+AGG | - | chr3_2:30098961-30098980 | None:intergenic | 10.0% |
!! | AAAAAATATTTGACAAAAAA+GGG | - | chr3_2:30099211-30099230 | None:intergenic | 10.0% |
!!! | GATTTTTTTCAAATTATTAA+TGG | + | chr3_2:30100130-30100149 | Msa0402180:intron | 10.0% |
!! | AATTAAAATAGTTTAAATGA+AGG | - | chr3_2:30103477-30103496 | None:intergenic | 10.0% |
!! | ATTGAGTAAAAAATAAAAAT+TGG | - | chr3_2:30103501-30103520 | None:intergenic | 10.0% |
!!! | AAACAAAACATTTTATAAAA+CGG | - | chr3_2:30103881-30103900 | None:intergenic | 10.0% |
!!! | TAATATTTTGTTTATTCTTT+TGG | + | chr3_2:30104347-30104366 | Msa0402180:intron | 10.0% |
!! | AAAATTAAACAAAAATATCA+TGG | - | chr3_2:30105329-30105348 | None:intergenic | 10.0% |
!! | TCAAAACTAATTTATTTATT+TGG | - | chr3_2:30106082-30106101 | None:intergenic | 10.0% |
!! | AAAAATATTTGACAAAAAAG+GGG | - | chr3_2:30099210-30099229 | None:intergenic | 15.0% |
!! | CAAAAAATATTTGACAAAAA+AGG | - | chr3_2:30099212-30099231 | None:intergenic | 15.0% |
!!! | CTTTTTTGTCAAATATTTTT+TGG | + | chr3_2:30099210-30099229 | Msa0402180:five_prime_UTR | 15.0% |
!! | ATAAAATTAAAACCTTTGAT+TGG | - | chr3_2:30101688-30101707 | None:intergenic | 15.0% |
!!! | ATAAAATAAATTTTGATGCA+TGG | - | chr3_2:30102073-30102092 | None:intergenic | 15.0% |
!! | TTTATTCATGTTAAATAATG+CGG | + | chr3_2:30102088-30102107 | Msa0402180:intron | 15.0% |
!! | AGCAAAAAAAAAATATAGTT+AGG | - | chr3_2:30102702-30102721 | None:intergenic | 15.0% |
!!! | AACTATATTTTTTTTTTGCT+AGG | + | chr3_2:30102702-30102721 | Msa0402180:intron | 15.0% |
!! | AACAAAAATAAGGAAAAATA+AGG | - | chr3_2:30103427-30103446 | None:intergenic | 15.0% |
!!! | TTATTTTTCCTTATTTTTGT+TGG | + | chr3_2:30103426-30103445 | Msa0402180:intron | 15.0% |
!! | TAAACTATAAATGATATAAC+TGG | + | chr3_2:30103564-30103583 | Msa0402180:intron | 15.0% |
!!! | GCTTTTTGAATAAATTTTAT+TGG | + | chr3_2:30103647-30103666 | Msa0402180:intron | 15.0% |
!! | AATAAAATGAAAACAACTTA+TGG | - | chr3_2:30104158-30104177 | None:intergenic | 15.0% |
!!! | TATTATGAAGAAAACTTTTT+AGG | + | chr3_2:30105047-30105066 | Msa0402180:intron | 15.0% |
!!! | ATTATGAAGAAAACTTTTTA+GGG | + | chr3_2:30105048-30105067 | Msa0402180:intron | 15.0% |
!!! | ATAATTTTCATATTCCTTTC+AGG | + | chr3_2:30098791-30098810 | Msa0402180:five_prime_UTR | 20.0% |
!!! | TAATTTTCATATTCCTTTCA+GGG | + | chr3_2:30098792-30098811 | Msa0402180:five_prime_UTR | 20.0% |
!! | AATCTCAATAAAAATCCAAA+GGG | - | chr3_2:30099010-30099029 | None:intergenic | 20.0% |
!! | AAATCTCAATAAAAATCCAA+AGG | - | chr3_2:30099011-30099030 | None:intergenic | 20.0% |
!! | ACTCAAGTAACAAAATTTAT+AGG | - | chr3_2:30099035-30099054 | None:intergenic | 20.0% |
!!! | AAATTTGTCTGATAGTTTTA+GGG | + | chr3_2:30099166-30099185 | Msa0402180:five_prime_UTR | 20.0% |
!! | ATACAAGAGTCATAAATATA+AGG | + | chr3_2:30100447-30100466 | Msa0402180:intron | 20.0% |
!! | GTAAATAGAGTAATTACATT+CGG | - | chr3_2:30100516-30100535 | None:intergenic | 20.0% |
!! | AAATATAGTGAAGATAAAGA+AGG | + | chr3_2:30100730-30100749 | Msa0402180:CDS | 20.0% |
!! | AAGATTATCTACTTCTTATT+TGG | + | chr3_2:30101151-30101170 | Msa0402180:CDS | 20.0% |
!!! | TTGTTTTTAATTGCCTTTAT+TGG | + | chr3_2:30101178-30101197 | Msa0402180:CDS | 20.0% |
!! | ATAGATGAAAGAATAATGAA+CGG | + | chr3_2:30101706-30101725 | Msa0402180:CDS | 20.0% |
!!! | AGTAACTAATTTCATTTTGT+AGG | + | chr3_2:30102127-30102146 | Msa0402180:intron | 20.0% |
!!! | TTTTAGAATTCAATAGTTCA+AGG | + | chr3_2:30102169-30102188 | Msa0402180:CDS | 20.0% |
!! | GAAGATTAATATTTATCAGT+TGG | + | chr3_2:30102657-30102676 | Msa0402180:intron | 20.0% |
!!! | TATGCATTTTCATTTTACAA+TGG | + | chr3_2:30102833-30102852 | Msa0402180:intron | 20.0% |
!!! | CATGAAGGTAAATAAATTTT+AGG | + | chr3_2:30103014-30103033 | Msa0402180:intron | 20.0% |
!!! | AAATTTTTACTTGTGCTATT+TGG | - | chr3_2:30103109-30103128 | None:intergenic | 20.0% |
!! | ATCTCAACATTCAATATATT+TGG | + | chr3_2:30104040-30104059 | Msa0402180:intron | 20.0% |
!! | TCTCAACATTCAATATATTT+GGG | + | chr3_2:30104041-30104060 | Msa0402180:intron | 20.0% |
!! | AAAGTCACAAATTTCATTTA+AGG | - | chr3_2:30104222-30104241 | None:intergenic | 20.0% |
!! | TAAATATGTTTATCCAATCA+AGG | + | chr3_2:30104304-30104323 | Msa0402180:intron | 20.0% |
!! | TTCTACAAGAATATTACATT+TGG | + | chr3_2:30104385-30104404 | Msa0402180:CDS | 20.0% |
!!! | TTATTTTTCCAAATTCTTAC+CGG | - | chr3_2:30104671-30104690 | None:intergenic | 20.0% |
!! | TTAGAGAAAATGTAAATGTT+TGG | - | chr3_2:30105210-30105229 | None:intergenic | 20.0% |
!!! | TTTGACATTTTAGAATGTAA+AGG | + | chr3_2:30105960-30105979 | Msa0402180:three_prime_UTR | 20.0% |
! | GTACAAATAACACAACAATT+TGG | + | chr3_2:30098750-30098769 | Msa0402180:five_prime_UTR | 25.0% |
! | AACTAATGATATCTAGAAGA+AGG | - | chr3_2:30098859-30098878 | None:intergenic | 25.0% |
!! | CTTCTTTAAAAAATACCCTT+TGG | + | chr3_2:30098992-30099011 | Msa0402180:five_prime_UTR | 25.0% |
!!! | ATTTTGTTACTTGAGTTCAA+AGG | + | chr3_2:30099039-30099058 | Msa0402180:five_prime_UTR | 25.0% |
!!! | TTTTGTTACTTGAGTTCAAA+GGG | + | chr3_2:30099040-30099059 | Msa0402180:five_prime_UTR | 25.0% |
!! | CAAATTTGTCTGATAGTTTT+AGG | + | chr3_2:30099165-30099184 | Msa0402180:five_prime_UTR | 25.0% |
!! | TAGATTTGAATCAGGTTTTA+AGG | + | chr3_2:30099378-30099397 | Msa0402180:CDS | 25.0% |
! | ATTATGCTGATAATTCTGTT+AGG | + | chr3_2:30099401-30099420 | Msa0402180:CDS | 25.0% |
!! | GAAATGACATTTTAGATTCA+AGG | + | chr3_2:30099704-30099723 | Msa0402180:intron | 25.0% |
! | AACAAATGCTCAAATTTGTA+AGG | - | chr3_2:30099797-30099816 | None:intergenic | 25.0% |
! | ATACAATCAGAATATTCACA+TGG | - | chr3_2:30099972-30099991 | None:intergenic | 25.0% |
! | TTCAGTGTAATTATATGTGT+CGG | - | chr3_2:30100104-30100123 | None:intergenic | 25.0% |
! | TCAGTTACAAAACAAACTTA+AGG | + | chr3_2:30100261-30100280 | Msa0402180:intron | 25.0% |
!!! | TTACGTTATTTTTATGCAGA+AGG | + | chr3_2:30100532-30100551 | Msa0402180:intron | 25.0% |
! | GTTATATAATCTGAATCGTT+TGG | - | chr3_2:30100571-30100590 | None:intergenic | 25.0% |
! | AGAAGAGTTATATGTCATAA+AGG | + | chr3_2:30100662-30100681 | Msa0402180:CDS | 25.0% |
!! | ACAAATTTGAAGCTAAAACA+AGG | + | chr3_2:30100842-30100861 | Msa0402180:CDS | 25.0% |
! | AGTAACTTCTTCATTAAATG+AGG | + | chr3_2:30100871-30100890 | Msa0402180:CDS | 25.0% |
!! | AAAGAGTACAAATTTGCATT+TGG | - | chr3_2:30100941-30100960 | None:intergenic | 25.0% |
! | AAAGAGAATAGATCCAATAA+AGG | - | chr3_2:30101194-30101213 | None:intergenic | 25.0% |
! | TTTATTGGATCTATTCTCTT+TGG | + | chr3_2:30101193-30101212 | Msa0402180:CDS | 25.0% |
!!! | TCTTTTAGGATCAAAGAAAA+TGG | - | chr3_2:30101287-30101306 | None:intergenic | 25.0% |
!!! | ATCTGTTTTTCATTTCTTGA+CGG | + | chr3_2:30101318-30101337 | Msa0402180:CDS | 25.0% |
! | CAATTCTATTGAGAAATACA+AGG | - | chr3_2:30101377-30101396 | None:intergenic | 25.0% |
! | CTTGTATTTCTCAATAGAAT+TGG | + | chr3_2:30101375-30101394 | Msa0402180:CDS | 25.0% |
! | GATTAATGAATATGCTTTGA+AGG | - | chr3_2:30101408-30101427 | None:intergenic | 25.0% |
! | TAATATGTACTATGAAGAAC+TGG | + | chr3_2:30101435-30101454 | Msa0402180:CDS | 25.0% |
! | TATGACAAACAGACAATAAA+CGG | - | chr3_2:30101777-30101796 | None:intergenic | 25.0% |
!!! | TGGGTTTTAAATTCTACAAA+AGG | + | chr3_2:30101890-30101909 | Msa0402180:CDS | 25.0% |
! | CTACAAGCAATAACTAAATT+AGG | - | chr3_2:30102047-30102066 | None:intergenic | 25.0% |
! | GTAAAACTTGAAAATATCGA+AGG | - | chr3_2:30102286-30102305 | None:intergenic | 25.0% |
! | AAATATCAGAAAAGATTGAG+AGG | + | chr3_2:30102557-30102576 | Msa0402180:CDS | 25.0% |
!!! | CGCATGTGAAATTATTTTTT+TGG | - | chr3_2:30102638-30102657 | None:intergenic | 25.0% |
! | ACAAGCTAGAATTAAGATAT+GGG | + | chr3_2:30102750-30102769 | Msa0402180:CDS | 25.0% |
! | AATATTATACCCAATGTTGA+TGG | - | chr3_2:30102803-30102822 | None:intergenic | 25.0% |
!! | TTTTTGACGATTCATGTTTT+AGG | + | chr3_2:30103142-30103161 | Msa0402180:intron | 25.0% |
! | AAATGATATAACTGGCAAAA+CGG | + | chr3_2:30103572-30103591 | Msa0402180:intron | 25.0% |
!! | ACATTTTATAAAACGGTACA+CGG | - | chr3_2:30103874-30103893 | None:intergenic | 25.0% |
! | ACTTATTTGAATTTATCTGC+TGG | + | chr3_2:30104077-30104096 | Msa0402180:intron | 25.0% |
! | CTTATTTGAATTTATCTGCT+GGG | + | chr3_2:30104078-30104097 | Msa0402180:intron | 25.0% |
! | TTTCACTCTATTCTTATATG+AGG | + | chr3_2:30104408-30104427 | Msa0402180:CDS | 25.0% |
! | ATAGATGACAACATATTAGA+TGG | - | chr3_2:30104586-30104605 | None:intergenic | 25.0% |
!! | ATGAAGTATTAGTGCTATAT+AGG | + | chr3_2:30104772-30104791 | Msa0402180:intron | 25.0% |
! | TCTGTTATATAATAGCATTC+CGG | + | chr3_2:30104840-30104859 | Msa0402180:intron | 25.0% |
! | GAAAATGTAAATGTTTGGTA+GGG | - | chr3_2:30105205-30105224 | None:intergenic | 25.0% |
! | AGAAAATGTAAATGTTTGGT+AGG | - | chr3_2:30105206-30105225 | None:intergenic | 25.0% |
! | TGTATTCTACTTTATGTGTT+CGG | - | chr3_2:30105262-30105281 | None:intergenic | 25.0% |
! | GCAGAAGAAGAAAATTATTA+TGG | - | chr3_2:30105444-30105463 | None:intergenic | 25.0% |
! | TATTTATTCGTGTTTGCTTA+TGG | + | chr3_2:30105641-30105660 | Msa0402180:CDS | 25.0% |
! | AAATAATGTGAGAATCCAAA+AGG | - | chr3_2:30105735-30105754 | None:intergenic | 25.0% |
!! | ATGTAAAGGAAGTATAACAA+AGG | + | chr3_2:30105974-30105993 | Msa0402180:three_prime_UTR | 25.0% |
! | ATTTTGAATTTGACCCTGAA+AGG | - | chr3_2:30098808-30098827 | None:intergenic | 30.0% |
AGCTTCAAGTGAAAAACAAA+AGG | - | chr3_2:30098923-30098942 | None:intergenic | 30.0% | |
CAACAAGATAGATTTGAATC+AGG | + | chr3_2:30099370-30099389 | Msa0402180:CDS | 30.0% | |
AATTTCTATTTCCTTGTTGC+TGG | + | chr3_2:30099490-30099509 | Msa0402180:CDS | 30.0% | |
! | ATCTAAGATCACTTTCTTAC+TGG | + | chr3_2:30099825-30099844 | Msa0402180:intron | 30.0% |
TTGATAGAGAATGAACAAGT+TGG | + | chr3_2:30099992-30100011 | Msa0402180:intron | 30.0% | |
TTTCTACATGTTGAGAAAGA+CGG | + | chr3_2:30100357-30100376 | Msa0402180:intron | 30.0% | |
ATGTCTAAGTTACATAAGAG+AGG | + | chr3_2:30100415-30100434 | Msa0402180:intron | 30.0% | |
AGAGTTATATGTCATAAAGG+TGG | + | chr3_2:30100665-30100684 | Msa0402180:CDS | 30.0% | |
! | TGGTGGCAATTTTGAATATA+CGG | + | chr3_2:30100685-30100704 | Msa0402180:CDS | 30.0% |
! | TTTGAAGCTAAAACAAGGTT+TGG | + | chr3_2:30100847-30100866 | Msa0402180:CDS | 30.0% |
! | GCAAATTTGTACTCTTTTGT+CGG | + | chr3_2:30100944-30100963 | Msa0402180:CDS | 30.0% |
! | CAAATTTGTACTCTTTTGTC+GGG | + | chr3_2:30100945-30100964 | Msa0402180:CDS | 30.0% |
!!! | TATTACGAAGTTTTGAGTCT+CGG | - | chr3_2:30101024-30101043 | None:intergenic | 30.0% |
CGTAATACAGACTTCATATT+CGG | + | chr3_2:30101037-30101056 | Msa0402180:CDS | 30.0% | |
ACAACGGAATTATGAAAAGA+TGG | + | chr3_2:30101239-30101258 | Msa0402180:CDS | 30.0% | |
! | TTTAGGATCAAAGAAAATGG+TGG | - | chr3_2:30101284-30101303 | None:intergenic | 30.0% |
GAAGAAGTTGTATAGCATTA+AGG | - | chr3_2:30101344-30101363 | None:intergenic | 30.0% | |
ATTGAGAAATACAAGGAGAT+GGG | - | chr3_2:30101370-30101389 | None:intergenic | 30.0% | |
TATTGAGAAATACAAGGAGA+TGG | - | chr3_2:30101371-30101390 | None:intergenic | 30.0% | |
! | TTCATTCAAGTTTGAAGTAC+GGG | - | chr3_2:30101476-30101495 | None:intergenic | 30.0% |
! | CTTCATTCAAGTTTGAAGTA+CGG | - | chr3_2:30101477-30101496 | None:intergenic | 30.0% |
TCAAACTTGAATGAAGAACT+CGG | + | chr3_2:30101481-30101500 | Msa0402180:CDS | 30.0% | |
ACAATCCTTTCTGATAAAAC+TGG | + | chr3_2:30101514-30101533 | Msa0402180:CDS | 30.0% | |
!! | AAGTTCCAGTTTTATCAGAA+AGG | - | chr3_2:30101522-30101541 | None:intergenic | 30.0% |
AATGGAGTTCATCAAATGTT+CGG | + | chr3_2:30101555-30101574 | Msa0402180:CDS | 30.0% | |
AACTGGAATCAATTGATATC+AGG | + | chr3_2:30101641-30101660 | Msa0402180:CDS | 30.0% | |
ACTGGAATCAATTGATATCA+GGG | + | chr3_2:30101642-30101661 | Msa0402180:CDS | 30.0% | |
AAAGAATAATGAACGGAAAC+TGG | + | chr3_2:30101713-30101732 | Msa0402180:CDS | 30.0% | |
TCAGAACAGTTTATCAATGA+TGG | + | chr3_2:30101915-30101934 | Msa0402180:CDS | 30.0% | |
TCATGTTAAATAATGCGGAA+AGG | + | chr3_2:30102093-30102112 | Msa0402180:intron | 30.0% | |
GTGATAGTTAAAGATGAAGA+CGG | + | chr3_2:30102204-30102223 | Msa0402180:CDS | 30.0% | |
TGATAGTTAAAGATGAAGAC+GGG | + | chr3_2:30102205-30102224 | Msa0402180:CDS | 30.0% | |
! | AGAATTTTGTTGCTCTGTAA+AGG | + | chr3_2:30102228-30102247 | Msa0402180:CDS | 30.0% |
AGTCGATATGCTAAATGAAA+AGG | - | chr3_2:30102308-30102327 | None:intergenic | 30.0% | |
TGCATGGAAATTATGATTCA+AGG | - | chr3_2:30102333-30102352 | None:intergenic | 30.0% | |
GGAGTTTGAAGAAAAAACTT+TGG | + | chr3_2:30102387-30102406 | Msa0402180:CDS | 30.0% | |
AATCAATGATTCATGATCCA+TGG | - | chr3_2:30102533-30102552 | None:intergenic | 30.0% | |
!!! | TTTTTTTGGTTACCCCATTT+TGG | - | chr3_2:30102624-30102643 | None:intergenic | 30.0% |
CACAAGCTAGAATTAAGATA+TGG | + | chr3_2:30102749-30102768 | Msa0402180:CDS | 30.0% | |
!! | ATTAAGATATGGGTTTTGAC+TGG | + | chr3_2:30102760-30102779 | Msa0402180:CDS | 30.0% |
!!! | TTAAGATATGGGTTTTGACT+GGG | + | chr3_2:30102761-30102780 | Msa0402180:CDS | 30.0% |
TTCTCTAATGCTTGAATTTC+AGG | - | chr3_2:30102970-30102989 | None:intergenic | 30.0% | |
TGAAATTCAAGCATTAGAGA+AGG | + | chr3_2:30102969-30102988 | Msa0402180:CDS | 30.0% | |
AACACTAATTGAAGCTACAT+AGG | - | chr3_2:30103085-30103104 | None:intergenic | 30.0% | |
!! | ATTCATGTTTTAGGCATCAA+GGG | + | chr3_2:30103151-30103170 | Msa0402180:intron | 30.0% |
!!! | TTTCCTTATTTTTGTTGGTG+TGG | + | chr3_2:30103431-30103450 | Msa0402180:intron | 30.0% |
! | GCTGCTTATGATTATTGTTT+TGG | + | chr3_2:30103621-30103640 | Msa0402180:intron | 30.0% |
TTATTGGTACCTCTCATAAA+AGG | + | chr3_2:30103663-30103682 | Msa0402180:intron | 30.0% | |
! | ATCTAGTAACCTTTTATGAG+AGG | - | chr3_2:30103675-30103694 | None:intergenic | 30.0% |
CTCATAAAAGGTTACTAGAT+TGG | + | chr3_2:30103675-30103694 | Msa0402180:intron | 30.0% | |
ATATTGCAATTGCACAATTC+CGG | + | chr3_2:30103938-30103957 | Msa0402180:CDS | 30.0% | |
GAAAGATTACTTCTTGTACA+TGG | + | chr3_2:30103967-30103986 | Msa0402180:CDS | 30.0% | |
TTTGAATGATCTTACCATTG+TGG | - | chr3_2:30104016-30104035 | None:intergenic | 30.0% | |
TTATTTCCAATAAACTCTCC+AGG | + | chr3_2:30104173-30104192 | Msa0402180:intron | 30.0% | |
TATTAGTGCTATATAGGCTT+AGG | + | chr3_2:30104778-30104797 | Msa0402180:intron | 30.0% | |
!! | AAACAACCACATTTTAATCG+TGG | - | chr3_2:30105795-30105814 | None:intergenic | 30.0% |
TCACAAAAGTTAGTAGTTGT+TGG | - | chr3_2:30105934-30105953 | None:intergenic | 30.0% | |
!! | AAAGGTTTCTAGTTGAGAAT+GGG | + | chr3_2:30105992-30106011 | Msa0402180:three_prime_UTR | 30.0% |
!! | TGCTACTTTCACTTTGATTC+CGG | + | chr3_2:30098712-30098731 | Msa0402180:five_prime_UTR | 35.0% |
! | GTACTTTTCCTACAAATTGC+CGG | - | chr3_2:30098734-30098753 | None:intergenic | 35.0% |
GGTGAAGAAAAGTAGAAACA+TGG | - | chr3_2:30098832-30098851 | None:intergenic | 35.0% | |
!! | AGTCAAGTGCTTTTTGTCTA+AGG | + | chr3_2:30099109-30099128 | Msa0402180:five_prime_UTR | 35.0% |
!! | AAGTGCTTTTTGTCTAAGGT+GGG | + | chr3_2:30099113-30099132 | Msa0402180:five_prime_UTR | 35.0% |
TAGGGAAGATAAAATCTCAG+TGG | + | chr3_2:30099184-30099203 | Msa0402180:five_prime_UTR | 35.0% | |
GAATGCTCTCTCTTAAACTT+TGG | - | chr3_2:30099304-30099323 | None:intergenic | 35.0% | |
ATTCACAGATTGGAAGACAA+GGG | + | chr3_2:30099320-30099339 | Msa0402180:CDS | 35.0% | |
AACTGCTCAAACAATGACTT+AGG | - | chr3_2:30099457-30099476 | None:intergenic | 35.0% | |
AGTCATTGTTTGAGCAGTTT+AGG | + | chr3_2:30099458-30099477 | Msa0402180:CDS | 35.0% | |
ATTGTTTGAGCAGTTTAGGA+GGG | + | chr3_2:30099462-30099481 | Msa0402180:CDS | 35.0% | |
ATAGCACTAACAGCAGTATA+AGG | - | chr3_2:30099541-30099560 | None:intergenic | 35.0% | |
CTTCCTTTAGCTGTTATAGT+TGG | + | chr3_2:30099562-30099581 | Msa0402180:CDS | 35.0% | |
! | TGTTATAGTTGGTGCAACTA+TGG | + | chr3_2:30099573-30099592 | Msa0402180:CDS | 35.0% |
!!! | AAGGTGTTGAAGATTTTCGT+CGG | + | chr3_2:30099602-30099621 | Msa0402180:CDS | 35.0% |
! | AGATTTTCGTCGGAAAAAAC+AGG | + | chr3_2:30099612-30099631 | Msa0402180:CDS | 35.0% |
! | TTGCTTTGGATTCTGTTTCT+CGG | + | chr3_2:30099765-30099784 | Msa0402180:intron | 35.0% |
! | GTAATTATATGTGTCGGTGT+CGG | - | chr3_2:30100098-30100117 | None:intergenic | 35.0% |
TAAGCTATGAAGCATGGATA+CGG | - | chr3_2:30100197-30100216 | None:intergenic | 35.0% | |
GAGTAATAAGCTATGAAGCA+TGG | - | chr3_2:30100203-30100222 | None:intergenic | 35.0% | |
!! | AACAAACTTAAGGCCTTGTT+TGG | + | chr3_2:30100271-30100290 | Msa0402180:intron | 35.0% |
!! | ATTAGTTCTGCAGGATATTG+AGG | + | chr3_2:30100631-30100650 | Msa0402180:intron | 35.0% |
GTTATATGTCATAAAGGTGG+TGG | + | chr3_2:30100668-30100687 | Msa0402180:CDS | 35.0% | |
! | GCAATTTTGAATATACGGAG+TGG | + | chr3_2:30100690-30100709 | Msa0402180:CDS | 35.0% |
ACTAAACGTGACTTGAACAA+CGG | + | chr3_2:30101223-30101242 | Msa0402180:CDS | 35.0% | |
! | AAGAAAATGGTGGAATCATC+TGG | - | chr3_2:30101274-30101293 | None:intergenic | 35.0% |
GAAATGAAAAACAGATGCTG+CGG | - | chr3_2:30101314-30101333 | None:intergenic | 35.0% | |
CAGAAAGGATTGTGTCAATT+TGG | - | chr3_2:30101507-30101526 | None:intergenic | 35.0% | |
!! | AACTTTGACTTGCAACTCAA+TGG | + | chr3_2:30101537-30101556 | Msa0402180:CDS | 35.0% |
GATCGAAAAGAACCAATCAA+AGG | + | chr3_2:30101673-30101692 | Msa0402180:CDS | 35.0% | |
! | CAGTTTATCAATGATGGAGT+TGG | + | chr3_2:30101921-30101940 | Msa0402180:CDS | 35.0% |
TTGAAAATATCGAAGGCTAC+AGG | - | chr3_2:30102279-30102298 | None:intergenic | 35.0% | |
TTTGAAAGGCTTGCCATTAA+TGG | + | chr3_2:30102361-30102380 | Msa0402180:CDS | 35.0% | |
TTCAAACTCCCTTCCATTAA+TGG | - | chr3_2:30102377-30102396 | None:intergenic | 35.0% | |
TTCTTCATCAAGTTCACGAT+AGG | - | chr3_2:30102461-30102480 | None:intergenic | 35.0% | |
! | GGATCATGAATCATTGATTG+AGG | + | chr3_2:30102534-30102553 | Msa0402180:CDS | 35.0% |
TAGAAGACAAGCTCCAAAAT+GGG | + | chr3_2:30102608-30102627 | Msa0402180:CDS | 35.0% | |
!!! | TAAGATATGGGTTTTGACTG+GGG | + | chr3_2:30102762-30102781 | Msa0402180:CDS | 35.0% |
ATTCAAGCATTAGAGAAGGA+TGG | + | chr3_2:30102973-30102992 | Msa0402180:CDS | 35.0% | |
!! | GATTCATGTTTTAGGCATCA+AGG | + | chr3_2:30103150-30103169 | Msa0402180:intron | 35.0% |
GTGTATCTTCAGATATCTGA+AGG | + | chr3_2:30103179-30103198 | Msa0402180:CDS | 35.0% | |
AAACTGCTTTCTGCATCTAA+AGG | + | chr3_2:30103206-30103225 | Msa0402180:CDS | 35.0% | |
AACTGCTTTCTGCATCTAAA+GGG | + | chr3_2:30103207-30103226 | Msa0402180:CDS | 35.0% | |
TAGAGGGAGAAACAAAGAAA+AGG | - | chr3_2:30103391-30103410 | None:intergenic | 35.0% | |
AGGACAAATTGTCAAGTAGA+GGG | - | chr3_2:30103407-30103426 | None:intergenic | 35.0% | |
AAGGACAAATTGTCAAGTAG+AGG | - | chr3_2:30103408-30103427 | None:intergenic | 35.0% | |
AAGCCACACCAACAAAAATA+AGG | - | chr3_2:30103437-30103456 | None:intergenic | 35.0% | |
GGTAAAACAACATTAGCCAT+CGG | + | chr3_2:30103712-30103731 | Msa0402180:CDS | 35.0% | |
GAAGTAATCTTTCCAGATAC+CGG | - | chr3_2:30103960-30103979 | None:intergenic | 35.0% | |
TACTTCTTGTACATGGACAT+TGG | + | chr3_2:30103974-30103993 | Msa0402180:CDS | 35.0% | |
!! | GTTGTTTTCATAAGCTATCC+TGG | - | chr3_2:30104194-30104213 | None:intergenic | 35.0% |
AAAAACCAGTCATTGTATGC+AGG | - | chr3_2:30104457-30104476 | None:intergenic | 35.0% | |
ACACATGTGGTTACATTCAA+TGG | - | chr3_2:30104708-30104727 | None:intergenic | 35.0% | |
AGTGTTCAATACAACACATG+TGG | - | chr3_2:30104721-30104740 | None:intergenic | 35.0% | |
TGTGTTGTATTGAACACTGA+CGG | + | chr3_2:30104723-30104742 | Msa0402180:intron | 35.0% | |
CTGTCTTCTCTTTCATAATC+CGG | - | chr3_2:30104862-30104881 | None:intergenic | 35.0% | |
! | TACTTTATGTGTTCGGCTTT+TGG | - | chr3_2:30105255-30105274 | None:intergenic | 35.0% |
TTTCCTATCTTGTACCAAGA+AGG | + | chr3_2:30105353-30105372 | Msa0402180:CDS | 35.0% | |
GTGTACAGAATGTCCTATTT+AGG | + | chr3_2:30105375-30105394 | Msa0402180:CDS | 35.0% | |
TACAGAATGTCCTATTTAGG+TGG | + | chr3_2:30105378-30105397 | Msa0402180:CDS | 35.0% | |
TGAGCATCCAACTTAGAATT+CGG | - | chr3_2:30105406-30105425 | None:intergenic | 35.0% | |
! | ATTCTAAGTTGGATGCTCAA+CGG | + | chr3_2:30105407-30105426 | Msa0402180:CDS | 35.0% |
TTCTTCTGCACTAAAGCAAT+AGG | + | chr3_2:30105455-30105474 | Msa0402180:CDS | 35.0% | |
!! | CATGTATACTTGTGTCGTTT+GGG | + | chr3_2:30105535-30105554 | Msa0402180:CDS | 35.0% |
AATAGCAATAGAACCCCAAA+TGG | - | chr3_2:30105618-30105637 | None:intergenic | 35.0% | |
! | TTTGGGGTTCTATTGCTATT+TGG | + | chr3_2:30105618-30105637 | Msa0402180:CDS | 35.0% |
GATTCTCACATTATTTGTCG+CGG | + | chr3_2:30105739-30105758 | Msa0402180:CDS | 35.0% | |
TGTTTCCTATGCATCATGAA+AGG | + | chr3_2:30105810-30105829 | Msa0402180:CDS | 35.0% | |
GTTTCCTATGCATCATGAAA+GGG | + | chr3_2:30105811-30105830 | Msa0402180:CDS | 35.0% | |
GTACAATGGATGAGGTATAA+GGG | + | chr3_2:30105833-30105852 | Msa0402180:CDS | 35.0% | |
!! | CAAAGGTTTCTAGTTGAGAA+TGG | + | chr3_2:30105991-30106010 | Msa0402180:three_prime_UTR | 35.0% |
CTTTGATTCCGGCAATTTGT+AGG | + | chr3_2:30098723-30098742 | Msa0402180:five_prime_UTR | 40.0% | |
TGATATCTAGAAGAAGGACG+CGG | - | chr3_2:30098853-30098872 | None:intergenic | 40.0% | |
!! | CAAGTGCTTTTTGTCTAAGG+TGG | + | chr3_2:30099112-30099131 | Msa0402180:five_prime_UTR | 40.0% |
!! | AGTGCTTTTTGTCTAAGGTG+GGG | + | chr3_2:30099114-30099133 | Msa0402180:five_prime_UTR | 40.0% |
!!! | GGTAGGTTTTGGAGACTTTA+AGG | + | chr3_2:30099135-30099154 | Msa0402180:five_prime_UTR | 40.0% |
!! | AAGAGAGAGCATTCACAGAT+TGG | + | chr3_2:30099310-30099329 | Msa0402180:CDS | 40.0% |
CATTCACAGATTGGAAGACA+AGG | + | chr3_2:30099319-30099338 | Msa0402180:CDS | 40.0% | |
!! | TTGGAAGACAAGGGTATTCT+AGG | + | chr3_2:30099329-30099348 | Msa0402180:CDS | 40.0% |
!! | TGGAAGACAAGGGTATTCTA+GGG | + | chr3_2:30099330-30099349 | Msa0402180:CDS | 40.0% |
CATTGTTTGAGCAGTTTAGG+AGG | + | chr3_2:30099461-30099480 | Msa0402180:CDS | 40.0% | |
AAGCTAAGATACCAGCAACA+AGG | - | chr3_2:30099504-30099523 | None:intergenic | 40.0% | |
GCACCAACTATAACAGCTAA+AGG | - | chr3_2:30099568-30099587 | None:intergenic | 40.0% | |
! | CAAATGTATCAGCGTCGTTT+TGG | - | chr3_2:30099748-30099767 | None:intergenic | 40.0% |
! | GTTGGTTCCAAAATAACTGC+AGG | + | chr3_2:30100010-30100029 | Msa0402180:intron | 40.0% |
GTTCCAAAATAACTGCAGGT+AGG | + | chr3_2:30100014-30100033 | Msa0402180:intron | 40.0% | |
! | CAACCTACCTGCAGTTATTT+TGG | - | chr3_2:30100020-30100039 | None:intergenic | 40.0% |
CAAAATAACTGCAGGTAGGT+TGG | + | chr3_2:30100018-30100037 | Msa0402180:intron | 40.0% | |
TTCTCTGATTAGACGTGTCT+CGG | + | chr3_2:30100053-30100072 | Msa0402180:intron | 40.0% | |
GATCTAGCTATTAACGTAGC+TGG | - | chr3_2:30100297-30100316 | None:intergenic | 40.0% | |
!! | AGCTAACTGATTAGTTCTGC+AGG | + | chr3_2:30100622-30100641 | Msa0402180:intron | 40.0% |
AACTGGACGAAAGCAGTAAT+AGG | - | chr3_2:30100775-30100794 | None:intergenic | 40.0% | |
CTACGTTGAAACGATGAACT+TGG | + | chr3_2:30100811-30100830 | Msa0402180:CDS | 40.0% | |
GTTGAAACGATGAACTTGGA+TGG | + | chr3_2:30100815-30100834 | Msa0402180:CDS | 40.0% | |
!! | TGACAGCAGCTTTGAAATCA+TGG | - | chr3_2:30100907-30100926 | None:intergenic | 40.0% |
! | TTTTGCTCCTTTTCGAAGGA+GGG | - | chr3_2:30101114-30101133 | None:intergenic | 40.0% |
! | ATTTTGCTCCTTTTCGAAGG+AGG | - | chr3_2:30101115-30101134 | None:intergenic | 40.0% |
! | TCGATTTTGCTCCTTTTCGA+AGG | - | chr3_2:30101118-30101137 | None:intergenic | 40.0% |
GAGCAAAATCGAGATGAAGA+TGG | + | chr3_2:30101126-30101145 | Msa0402180:CDS | 40.0% | |
CTATGAAGAACTGGACAAAC+CGG | + | chr3_2:30101444-30101463 | Msa0402180:CDS | 40.0% | |
TTCATCAAATGTTCGGTTGC+TGG | + | chr3_2:30101562-30101581 | Msa0402180:CDS | 40.0% | |
TCATCAAATGTTCGGTTGCT+GGG | + | chr3_2:30101563-30101582 | Msa0402180:CDS | 40.0% | |
!! | GATTGGTTCTTTTCGATCAC+TGG | - | chr3_2:30101671-30101690 | None:intergenic | 40.0% |
TTCTGTATAACATCTGCACG+AGG | - | chr3_2:30101748-30101767 | None:intergenic | 40.0% | |
! | ATCACAAATGCTGCTTCATC+AGG | - | chr3_2:30101856-30101875 | None:intergenic | 40.0% |
! | ATCAATGATGGAGTTGGATC+CGG | + | chr3_2:30101927-30101946 | Msa0402180:CDS | 40.0% |
! | TTTCTGGCAATGAGGTTGAA+AGG | + | chr3_2:30101950-30101969 | Msa0402180:CDS | 40.0% |
ACGTAAACAGAGAAGAGAGT+TGG | - | chr3_2:30101995-30102014 | None:intergenic | 40.0% | |
CTTTCAAACATGACACTGCA+TGG | - | chr3_2:30102349-30102368 | None:intergenic | 40.0% | |
CATGCAGTGTCATGTTTGAA+AGG | + | chr3_2:30102347-30102366 | Msa0402180:intron | 40.0% | |
AAAGGCTTGCCATTAATGGA+AGG | + | chr3_2:30102365-30102384 | Msa0402180:CDS | 40.0% | |
AAGGCTTGCCATTAATGGAA+GGG | + | chr3_2:30102366-30102385 | Msa0402180:CDS | 40.0% | |
! | GGTGACTGTAATTTTCGCTT+CGG | - | chr3_2:30102512-30102531 | None:intergenic | 40.0% |
AGCGAAAATTACAGTCACCA+TGG | + | chr3_2:30102513-30102532 | Msa0402180:CDS | 40.0% | |
GAGAGGAATCTAATCCTTCT+CGG | + | chr3_2:30102574-30102593 | Msa0402180:CDS | 40.0% | |
GTAGAAGACAAGCTCCAAAA+TGG | + | chr3_2:30102607-30102626 | Msa0402180:CDS | 40.0% | |
AGAAGACAAGCTCCAAAATG+GGG | + | chr3_2:30102609-30102628 | Msa0402180:CDS | 40.0% | |
! | GCAAGCTTTTCAATACACTC+AGG | - | chr3_2:30102730-30102749 | None:intergenic | 40.0% |
!!! | GGTTTTGACTGGGGATAAAA+TGG | + | chr3_2:30102771-30102790 | Msa0402180:CDS | 40.0% |
AGACAAGATGGCTATCATGA+AGG | + | chr3_2:30102999-30103018 | Msa0402180:CDS | 40.0% | |
GCATTTGCTCTGATAATCGA+TGG | + | chr3_2:30103242-30103261 | Msa0402180:CDS | 40.0% | |
GTCACTTGTTTATGCTCTAG+AGG | + | chr3_2:30103268-30103287 | Msa0402180:CDS | 40.0% | |
AATCATAAGCAGCATGCACA+CGG | - | chr3_2:30103614-30103633 | None:intergenic | 40.0% | |
ATGCTTCAAGAAGCTGATGT+AGG | + | chr3_2:30103757-30103776 | Msa0402180:CDS | 40.0% | |
TGCAATATCACTAGCCATGA+CGG | - | chr3_2:30103926-30103945 | None:intergenic | 40.0% | |
AATTGCACAATTCCGGTATC+TGG | + | chr3_2:30103945-30103964 | Msa0402180:CDS | 40.0% | |
!! | TACATGGACATTGGTGTTAC+AGG | + | chr3_2:30103983-30104002 | Msa0402180:CDS | 40.0% |
AGCTATCCTGGAGAGTTTAT+TGG | - | chr3_2:30104182-30104201 | None:intergenic | 40.0% | |
! | TTTTGTGACGTTGCCTTGAT+TGG | - | chr3_2:30104320-30104339 | None:intergenic | 40.0% |
TTGACCAAGATGTATCTGCT+AGG | + | chr3_2:30104530-30104549 | Msa0402180:CDS | 40.0% | |
AGTACCTAGCAGATACATCT+TGG | - | chr3_2:30104537-30104556 | None:intergenic | 40.0% | |
ACACCTTCTTGGTACAAGAT+AGG | - | chr3_2:30105359-30105378 | None:intergenic | 40.0% | |
! | TTCTAAGTTGGATGCTCAAC+GGG | + | chr3_2:30105408-30105427 | Msa0402180:CDS | 40.0% |
! | TCCTAGTATGTCTTTTCCAG+CGG | - | chr3_2:30105510-30105529 | None:intergenic | 40.0% |
CCAAACGACACAAGTATACA+TGG | - | chr3_2:30105537-30105556 | None:intergenic | 40.0% | |
! | CCATGTATACTTGTGTCGTT+TGG | + | chr3_2:30105534-30105553 | Msa0402180:CDS | 40.0% |
! | TTGGGTTGTAAACCTACAGA+TGG | + | chr3_2:30105553-30105572 | Msa0402180:CDS | 40.0% |
AATGGCAACATGTTGTACCA+AGG | - | chr3_2:30105600-30105619 | None:intergenic | 40.0% | |
TGGTACAACATGTTGCCATT+TGG | + | chr3_2:30105600-30105619 | Msa0402180:CDS | 40.0% | |
! | GGTACAACATGTTGCCATTT+GGG | + | chr3_2:30105601-30105620 | Msa0402180:CDS | 40.0% |
! | GTACAACATGTTGCCATTTG+GGG | + | chr3_2:30105602-30105621 | Msa0402180:CDS | 40.0% |
GCAGTTGTTGAAAAGCTTGA+AGG | - | chr3_2:30105674-30105693 | None:intergenic | 40.0% | |
TGTACCCTTTCATGATGCAT+AGG | - | chr3_2:30105818-30105837 | None:intergenic | 40.0% | |
! | TGCATCATGAAAGGGTACAA+TGG | + | chr3_2:30105819-30105838 | Msa0402180:CDS | 40.0% |
! | ATGAAAGGGTACAATGGATG+AGG | + | chr3_2:30105825-30105844 | Msa0402180:CDS | 40.0% |
GGTACAATGGATGAGGTATA+AGG | + | chr3_2:30105832-30105851 | Msa0402180:CDS | 40.0% | |
!! | CTTTTTGTCTAAGGTGGGGT+AGG | + | chr3_2:30099118-30099137 | Msa0402180:five_prime_UTR | 45.0% |
! | AGTTGGTGCAACTATGGTGA+AGG | + | chr3_2:30099579-30099598 | Msa0402180:CDS | 45.0% |
!! | TATCAGCGTCGTTTTGGTGT+CGG | - | chr3_2:30099742-30099761 | None:intergenic | 45.0% |
CGACGCTGATACATTTGCTT+TGG | + | chr3_2:30099751-30099770 | Msa0402180:intron | 45.0% | |
! | GCACAGTTCAGGTTTAGATC+AGG | - | chr3_2:30100228-30100247 | None:intergenic | 45.0% |
TTAACGTAGCTGGCCAAACA+AGG | - | chr3_2:30100287-30100306 | None:intergenic | 45.0% | |
TACGGAGTGGAAGAATCTCA+AGG | + | chr3_2:30100703-30100722 | Msa0402180:CDS | 45.0% | |
GAGTGGAAGAATCTCAAGGT+AGG | + | chr3_2:30100707-30100726 | Msa0402180:CDS | 45.0% | |
AAAGCAGTAATAGGTCGGCA+GGG | - | chr3_2:30100766-30100785 | None:intergenic | 45.0% | |
GGACGAAAGCAGTAATAGGT+CGG | - | chr3_2:30100771-30100790 | None:intergenic | 45.0% | |
!! | TCGGGAGCATGGATTTTGAA+GGG | + | chr3_2:30100963-30100982 | Msa0402180:CDS | 45.0% |
TTCGGAGCAGTCATCTTTAC+TGG | + | chr3_2:30101055-30101074 | Msa0402180:CDS | 45.0% | |
! | TTTGCTCCTTTTCGAAGGAG+GGG | - | chr3_2:30101113-30101132 | None:intergenic | 45.0% |
CATCAAATGTTCGGTTGCTG+GGG | + | chr3_2:30101564-30101583 | Msa0402180:CDS | 45.0% | |
! | TTGAGCAAGCCATTGGTAGT+AGG | + | chr3_2:30101614-30101633 | Msa0402180:CDS | 45.0% |
TGTTTGTCATACTGCCATGC+CGG | + | chr3_2:30101786-30101805 | Msa0402180:CDS | 45.0% | |
TGTGATTGCTGCAAGAGAAG+TGG | + | chr3_2:30101870-30101889 | Msa0402180:CDS | 45.0% | |
GTGATTGCTGCAAGAGAAGT+GGG | + | chr3_2:30101871-30101890 | Msa0402180:CDS | 45.0% | |
TCAACCTCATTGCCAGAAAC+CGG | - | chr3_2:30101949-30101968 | None:intergenic | 45.0% | |
GTGAGTGAATATGCTGATGC+AGG | + | chr3_2:30102415-30102434 | Msa0402180:CDS | 45.0% | |
ATGGAGACTGCCATCAACAT+TGG | + | chr3_2:30102790-30102809 | Msa0402180:CDS | 45.0% | |
TGGAGACTGCCATCAACATT+GGG | + | chr3_2:30102791-30102810 | Msa0402180:CDS | 45.0% | |
CAAGCATTAGAGAAGGATGG+AGG | + | chr3_2:30102976-30102995 | Msa0402180:CDS | 45.0% | |
ACAACATTAGCCATCGGTGA+TGG | + | chr3_2:30103718-30103737 | Msa0402180:CDS | 45.0% | |
CAAGAAGCTGATGTAGGTGT+TGG | + | chr3_2:30103763-30103782 | Msa0402180:CDS | 45.0% | |
!! | GATGTAGGTGTTGGAATCAG+TGG | + | chr3_2:30103772-30103791 | Msa0402180:CDS | 45.0% |
! | GTTGGAATCAGTGGTGTTGA+AGG | + | chr3_2:30103781-30103800 | Msa0402180:CDS | 45.0% |
!! | ATGGACATTGGTGTTACAGG+AGG | + | chr3_2:30103986-30104005 | Msa0402180:CDS | 45.0% |
TTACAGGAGGATGTCCACAA+TGG | + | chr3_2:30103999-30104018 | Msa0402180:CDS | 45.0% | |
AAGCACTTGCGAGACAGTTT+AGG | + | chr3_2:30104103-30104122 | Msa0402180:intron | 45.0% | |
GAGGTGTATGCATCATTCTC+TGG | + | chr3_2:30104427-30104446 | Msa0402180:CDS | 45.0% | |
ATCTTGGTCAAAGACCCCAA+GGG | - | chr3_2:30104521-30104540 | None:intergenic | 45.0% | |
CGACAACACCGGTAAGAATT+TGG | + | chr3_2:30104660-30104679 | Msa0402180:intron | 45.0% | |
GTATTGAACACTGACGGTGT+CGG | + | chr3_2:30104729-30104748 | Msa0402180:intron | 45.0% | |
GGACATTCTGTACACCTTCT+TGG | - | chr3_2:30105370-30105389 | None:intergenic | 45.0% | |
CTTCAAGCCTTTGACGAGAA+CGG | + | chr3_2:30105479-30105498 | Msa0402180:CDS | 45.0% | |
! | GGTTTTTCCGTTCTCGTCAA+AGG | - | chr3_2:30105489-30105508 | None:intergenic | 45.0% |
ACCGCTGGAAAAGACATACT+AGG | + | chr3_2:30105506-30105525 | Msa0402180:CDS | 45.0% | |
AGAATCCAAAAGGAAGCCGA+TGG | - | chr3_2:30105725-30105744 | None:intergenic | 45.0% | |
ATCGTGGAGCACGAAAAGTA+TGG | - | chr3_2:30105779-30105798 | None:intergenic | 45.0% | |
CGTGCTCCACGATTAAAATG+TGG | + | chr3_2:30105786-30105805 | Msa0402180:CDS | 45.0% | |
!!! | ATTTTTTTTTTTTTTTTTTG+AGG | + | chr3_2:30105881-30105900 | Msa0402180:three_prime_UTR | 5.0% |
!! | GTCTAAGGTGGGGTAGGTTT+TGG | + | chr3_2:30099124-30099143 | Msa0402180:five_prime_UTR | 50.0% |
GGTGCAACTATGGTGAAGGA+AGG | + | chr3_2:30099583-30099602 | Msa0402180:CDS | 50.0% | |
! | GATTAGACGTGTCTCGGTGT+CGG | + | chr3_2:30100059-30100078 | Msa0402180:intron | 50.0% |
GTTAGTGTCTGTGTCGTGTC+TGG | + | chr3_2:30100162-30100181 | Msa0402180:intron | 50.0% | |
GAAAGCAGTAATAGGTCGGC+AGG | - | chr3_2:30100767-30100786 | None:intergenic | 50.0% | |
GCAGACTGCATCTTCGTAAC+TGG | - | chr3_2:30100792-30100811 | None:intergenic | 50.0% | |
! | GTACTCTTTTGTCGGGAGCA+TGG | + | chr3_2:30100952-30100971 | Msa0402180:CDS | 50.0% |
!! | GTCGGGAGCATGGATTTTGA+AGG | + | chr3_2:30100962-30100981 | Msa0402180:CDS | 50.0% |
AGAAGCTGCTGAGGAGAAAG+TGG | - | chr3_2:30100998-30101017 | None:intergenic | 50.0% | |
CTTTACTGGTCACGACACGA+AGG | + | chr3_2:30101069-30101088 | Msa0402180:CDS | 50.0% | |
! | TTGCTCCTTTTCGAAGGAGG+GGG | - | chr3_2:30101112-30101131 | None:intergenic | 50.0% |
! | TTTGAAGTACGGGCAAGAGC+CGG | - | chr3_2:30101466-30101485 | None:intergenic | 50.0% |
ACAGAGGTTGAGCAAGCCAT+TGG | + | chr3_2:30101607-30101626 | Msa0402180:CDS | 50.0% | |
! | GCAAGCCATTGGTAGTAGGT+CGG | + | chr3_2:30101618-30101637 | Msa0402180:CDS | 50.0% |
CAGTTCCGACCTACTACCAA+TGG | - | chr3_2:30101626-30101645 | None:intergenic | 50.0% | |
! | CATTGGTAGTAGGTCGGAAC+TGG | + | chr3_2:30101624-30101643 | Msa0402180:CDS | 50.0% |
ATGGAGTTGGATCCGGTTTC+TGG | + | chr3_2:30101934-30101953 | Msa0402180:CDS | 50.0% | |
GAGCTTGTCTTCTACAGCAG+TGG | - | chr3_2:30102602-30102621 | None:intergenic | 50.0% | |
! | TCTTGTCGCTTGCTTCGACA+AGG | + | chr3_2:30102913-30102932 | Msa0402180:CDS | 50.0% |
GAAGGATGGAGGAGACAAGA+TGG | + | chr3_2:30102987-30103006 | Msa0402180:CDS | 50.0% | |
! | CAGAGCAAATGCTTGCTGAG+AGG | - | chr3_2:30103234-30103253 | None:intergenic | 50.0% |
CATACCAGAGCCTTCTGCTT+TGG | - | chr3_2:30103362-30103381 | None:intergenic | 50.0% | |
GTCATTAGCTCCATCACCGA+TGG | - | chr3_2:30103731-30103750 | None:intergenic | 50.0% | |
!! | GGTGATGGAGCTAATGACGT+GGG | + | chr3_2:30103733-30103752 | Msa0402180:CDS | 50.0% |
! | CAGTGGTGTTGAAGGAATGC+AGG | + | chr3_2:30103789-30103808 | Msa0402180:CDS | 50.0% |
TTGTATCCTCTCTCCTCCCT+AGG | + | chr3_2:30103900-30103919 | Msa0402180:intron | 50.0% | |
GACAGCCTGCATACAATGAC+TGG | + | chr3_2:30104449-30104468 | Msa0402180:CDS | 50.0% | |
CATCTTGGTCAAAGACCCCA+AGG | - | chr3_2:30104522-30104541 | None:intergenic | 50.0% | |
! | ATCTGCTAGGTACTGCGTCA+AGG | + | chr3_2:30104543-30104562 | Msa0402180:CDS | 50.0% |
TGTCGTGTCAGTGTCGTGTT+TGG | - | chr3_2:30104645-30104664 | None:intergenic | 50.0% | |
GAATTCGGCGCCACCTAAAT+AGG | - | chr3_2:30105391-30105410 | None:intergenic | 50.0% | |
CGTTCTCGTCAAAGGCTTGA+AGG | - | chr3_2:30105481-30105500 | None:intergenic | 50.0% | |
!!! | TTGCTCCATCGGCTTCCTTT+TGG | + | chr3_2:30105717-30105736 | Msa0402180:CDS | 50.0% |
!! | GTGCTGACTCAGCACAGTTC+AGG | - | chr3_2:30100239-30100258 | None:intergenic | 55.0% |
TCTCGGAGAAGAAGCTGCTG+AGG | - | chr3_2:30101007-30101026 | None:intergenic | 55.0% | |
! | GATGCTGCGGCGACTCTTTT+AGG | - | chr3_2:30101301-30101320 | None:intergenic | 55.0% |
TCGGTTGCTGGGGTAGCTTA+TGG | + | chr3_2:30101574-30101593 | Msa0402180:CDS | 55.0% | |
!! | TTATGGCCGTGGTGTCACAG+AGG | + | chr3_2:30101591-30101610 | Msa0402180:CDS | 55.0% |
GCTCAACCTCTGTGACACCA+CGG | - | chr3_2:30101600-30101619 | None:intergenic | 55.0% | |
TCATACTGCCATGCCGGAAG+TGG | + | chr3_2:30101792-30101811 | Msa0402180:CDS | 55.0% | |
CCTGTTTCCTCGTCCACTTC+CGG | - | chr3_2:30101808-30101827 | None:intergenic | 55.0% | |
!! | GGATCCGGTTTCTGGCAATG+AGG | + | chr3_2:30101942-30101961 | Msa0402180:CDS | 55.0% |
!! | TGCTCTGTAAAGGCGCTGAC+AGG | + | chr3_2:30102238-30102257 | Msa0402180:CDS | 55.0% |
TCGCTCATCGCCAAAGCAGA+AGG | + | chr3_2:30103349-30103368 | Msa0402180:CDS | 55.0% | |
ATCGCCAAAGCAGAAGGCTC+TGG | + | chr3_2:30103355-30103374 | Msa0402180:CDS | 55.0% | |
!! | CGGTGATGGAGCTAATGACG+TGG | + | chr3_2:30103732-30103751 | Msa0402180:CDS | 55.0% |
TCACTAGCCATGACGGCCTA+GGG | - | chr3_2:30103919-30103938 | None:intergenic | 55.0% | |
ATCACTAGCCATGACGGCCT+AGG | - | chr3_2:30103920-30103939 | None:intergenic | 55.0% | |
GTCAAAGACCCCAAGGGCAA+TGG | - | chr3_2:30104515-30104534 | None:intergenic | 55.0% | |
CGACACTGACACGACAACAC+CGG | + | chr3_2:30104649-30104668 | Msa0402180:intron | 55.0% | |
! | GGTGGCGCCGAATTCTAAGT+TGG | + | chr3_2:30105396-30105415 | Msa0402180:CDS | 55.0% |
GACGAGAACGGAAAAACCGC+TGG | + | chr3_2:30105491-30105510 | Msa0402180:CDS | 55.0% | |
CGCTGTGCGATACTTCACCT+TGG | + | chr3_2:30105580-30105599 | Msa0402180:CDS | 55.0% | |
CGCTGAGACTCTTGCTCCAT+CGG | + | chr3_2:30105706-30105725 | Msa0402180:CDS | 55.0% | |
! | CTGCAGGTAGGTTGGACGCA+CGG | + | chr3_2:30100026-30100045 | Msa0402180:intron | 60.0% |
! | CCTTTTCGAAGGAGGGGGAG+TGG | - | chr3_2:30101107-30101126 | None:intergenic | 60.0% |
CCACTCCCCCTCCTTCGAAA+AGG | + | chr3_2:30101104-30101123 | Msa0402180:CDS | 60.0% | |
TTCCTCGTCCACTTCCGGCA+TGG | - | chr3_2:30101803-30101822 | None:intergenic | 60.0% | |
CCGGAAGTGGACGAGGAAAC+AGG | + | chr3_2:30101805-30101824 | Msa0402180:CDS | 60.0% | |
! | CTACAGCAGTGGCACCGAGA+AGG | - | chr3_2:30102591-30102610 | None:intergenic | 60.0% |
TCGCTTCCTGCCATTGCCCT+TGG | + | chr3_2:30104502-30104521 | Msa0402180:CDS | 60.0% | |
CGCTTCCTGCCATTGCCCTT+GGG | + | chr3_2:30104503-30104522 | Msa0402180:CDS | 60.0% | |
GCTTCCTGCCATTGCCCTTG+GGG | + | chr3_2:30104504-30104523 | Msa0402180:CDS | 60.0% | |
AAGACCCCAAGGGCAATGGC+AGG | - | chr3_2:30104511-30104530 | None:intergenic | 60.0% | |
GCTGGGGTAGCTTATGGCCG+TGG | + | chr3_2:30101580-30101599 | Msa0402180:CDS | 65.0% | |
TGCCATGCCGGAAGTGGACG+AGG | + | chr3_2:30101798-30101817 | Msa0402180:CDS | 65.0% | |
TGACGGCCTAGGGAGGAGAG+AGG | - | chr3_2:30103909-30103928 | None:intergenic | 65.0% | |
CTCTCCTCCCTAGGCCGTCA+TGG | + | chr3_2:30103909-30103928 | Msa0402180:intron | 65.0% | |
CTAGCCATGACGGCCTAGGG+AGG | - | chr3_2:30103916-30103935 | None:intergenic | 65.0% | |
GCACAGCGAGCGCCATCTGT+AGG | - | chr3_2:30105568-30105587 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 30098706 | 30106191 | 30098706 | ID=Msa0402180;Name=Msa0402180 |
chr3_2 | mRNA | 30098706 | 30106191 | 30098706 | ID=Msa0402180-mRNA-1;Parent=Msa0402180;Name=Msa0402180-mRNA-1;_AED=0.04;_eAED=0.04;_QI=538|1|1|1|1|1|11|311|1154 |
chr3_2 | exon | 30098706 | 30099633 | 30098706 | ID=Msa0402180-mRNA-1:exon:5986;Parent=Msa0402180-mRNA-1 |
chr3_2 | exon | 30100644 | 30101971 | 30100644 | ID=Msa0402180-mRNA-1:exon:5987;Parent=Msa0402180-mRNA-1 |
chr3_2 | exon | 30102149 | 30102259 | 30102149 | ID=Msa0402180-mRNA-1:exon:5988;Parent=Msa0402180-mRNA-1 |
chr3_2 | exon | 30102354 | 30102630 | 30102354 | ID=Msa0402180-mRNA-1:exon:5989;Parent=Msa0402180-mRNA-1 |
chr3_2 | exon | 30102724 | 30102812 | 30102724 | ID=Msa0402180-mRNA-1:exon:5990;Parent=Msa0402180-mRNA-1 |
chr3_2 | exon | 30102909 | 30103020 | 30102909 | ID=Msa0402180-mRNA-1:exon:5991;Parent=Msa0402180-mRNA-1 |
chr3_2 | exon | 30103164 | 30103376 | 30103164 | ID=Msa0402180-mRNA-1:exon:5992;Parent=Msa0402180-mRNA-1 |
chr3_2 | exon | 30103685 | 30103810 | 30103685 | ID=Msa0402180-mRNA-1:exon:5993;Parent=Msa0402180-mRNA-1 |
chr3_2 | exon | 30103922 | 30104020 | 30103922 | ID=Msa0402180-mRNA-1:exon:5994;Parent=Msa0402180-mRNA-1 |
chr3_2 | exon | 30104373 | 30104564 | 30104373 | ID=Msa0402180-mRNA-1:exon:5995;Parent=Msa0402180-mRNA-1 |
chr3_2 | exon | 30105353 | 30106191 | 30105353 | ID=Msa0402180-mRNA-1:exon:5996;Parent=Msa0402180-mRNA-1 |
chr3_2 | five_prime_UTR | 30098706 | 30099243 | 30098706 | ID=Msa0402180-mRNA-1:five_prime_utr;Parent=Msa0402180-mRNA-1 |
chr3_2 | CDS | 30099244 | 30099633 | 30099244 | ID=Msa0402180-mRNA-1:cds;Parent=Msa0402180-mRNA-1 |
chr3_2 | CDS | 30100644 | 30101971 | 30100644 | ID=Msa0402180-mRNA-1:cds;Parent=Msa0402180-mRNA-1 |
chr3_2 | CDS | 30102149 | 30102259 | 30102149 | ID=Msa0402180-mRNA-1:cds;Parent=Msa0402180-mRNA-1 |
chr3_2 | CDS | 30102354 | 30102630 | 30102354 | ID=Msa0402180-mRNA-1:cds;Parent=Msa0402180-mRNA-1 |
chr3_2 | CDS | 30102724 | 30102812 | 30102724 | ID=Msa0402180-mRNA-1:cds;Parent=Msa0402180-mRNA-1 |
chr3_2 | CDS | 30102909 | 30103020 | 30102909 | ID=Msa0402180-mRNA-1:cds;Parent=Msa0402180-mRNA-1 |
chr3_2 | CDS | 30103164 | 30103376 | 30103164 | ID=Msa0402180-mRNA-1:cds;Parent=Msa0402180-mRNA-1 |
chr3_2 | CDS | 30103685 | 30103810 | 30103685 | ID=Msa0402180-mRNA-1:cds;Parent=Msa0402180-mRNA-1 |
chr3_2 | CDS | 30103922 | 30104020 | 30103922 | ID=Msa0402180-mRNA-1:cds;Parent=Msa0402180-mRNA-1 |
chr3_2 | CDS | 30104373 | 30104564 | 30104373 | ID=Msa0402180-mRNA-1:cds;Parent=Msa0402180-mRNA-1 |
chr3_2 | CDS | 30105353 | 30105880 | 30105353 | ID=Msa0402180-mRNA-1:cds;Parent=Msa0402180-mRNA-1 |
chr3_2 | three_prime_UTR | 30105881 | 30106191 | 30105881 | ID=Msa0402180-mRNA-1:three_prime_utr;Parent=Msa0402180-mRNA-1 |
Gene Sequence |
Protein sequence |