AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1272610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1272610 MtrunA17_Chr8g0337841 87.358 530 17 2 1 480 1 530 0.0 944
Msa1272610 MtrunA17_Chr1g0188571 45.249 221 111 2 265 475 90 310 1.54e-61 204
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1272610 AT3G03560.1 49.423 520 194 6 19 480 5 513 1.56e-166 481
Msa1272610 AT5G23490.2 30.112 538 276 11 44 489 195 724 6.27e-66 226
Msa1272610 AT5G23490.4 29.868 529 271 11 44 480 26 546 1.27e-65 222
Msa1272610 AT5G23490.1 29.868 529 271 11 44 480 195 715 2.59e-64 222
Msa1272610 AT5G08440.2 30.677 502 265 11 54 480 218 711 2.99e-64 222
Msa1272610 AT5G08440.1 30.616 503 265 11 54 480 218 712 4.08e-64 221
Msa1272610 AT5G08440.3 28.571 546 263 13 54 480 218 755 6.71e-57 202
Msa1272610 AT5G23510.1 43.318 217 117 2 276 488 45 259 2.53e-55 186
Msa1272610 AT5G23510.2 45.098 204 106 2 276 475 84 285 3.22e-54 185
Msa1272610 AT5G23510.3 45.098 204 106 2 276 475 45 246 3.49e-54 183
Msa1272610 AT5G23490.3 45.050 202 104 2 265 461 492 691 1.31e-51 187

Find 120 sgRNAs with CRISPR-Local

Find 487 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATCTCATGCTGCATTTC+TGG 0.038144 8_3:-6379586 None:intergenic
AACTTCTCTTTGTATGTTTC+AGG 0.122947 8_3:+6378050 Msa1272610:CDS
CAGTACCACTTATCTTAATT+TGG 0.128038 8_3:-6380582 None:intergenic
AGATGGATTCTTCTGAAAAT+TGG 0.139385 8_3:+6380524 Msa1272610:intron
GACAAAATGCAGAAATTTAT+TGG 0.148957 8_3:+6374193 Msa1272610:five_prime_UTR
CCTTGATTTGGAACAGAATA+AGG 0.188024 8_3:+6374156 Msa1272610:five_prime_UTR
ATTCCCCAGCAAAATCTTAT+TGG 0.213616 8_3:+6377018 Msa1272610:CDS
GAAGAGTCAAAGGAGAAATT+TGG 0.229370 8_3:-6373199 None:intergenic
ATCAACCATGATTCAATTAC+AGG 0.238399 8_3:+6374221 Msa1272610:five_prime_UTR
CATGGTTTAATTGATCAAAT+TGG 0.263912 8_3:+6377774 Msa1272610:CDS
TAACTATCATCTACAATATT+AGG 0.263941 8_3:-6381580 None:intergenic
GCTTAACAACGATGAGATTC+AGG 0.273041 8_3:+6374306 Msa1272610:CDS
CTAGGATTGCTGGCAGAATA+TGG 0.304704 8_3:+6375810 Msa1272610:CDS
CAATCTCATGCTGCATTTCT+GGG 0.321836 8_3:-6379585 None:intergenic
AGAATTGGAGAGTTAACTTC+TGG 0.339289 8_3:+6376782 Msa1272610:CDS
TCACATTCATAATGATTTCA+TGG 0.339589 8_3:+6376871 Msa1272610:CDS
CTCATACGGGAACCTTGATT+TGG 0.340899 8_3:+6374144 Msa1272610:five_prime_UTR
GTCATCTATGCTAGGATTGC+TGG 0.343886 8_3:+6375800 Msa1272610:CDS
GCCAACGTTGTACTTGCTTT+CGG 0.360826 8_3:+6373347 Msa1272610:five_prime_UTR
TGGGTTTGTGTCAGTGGGTT+CGG 0.363363 8_3:+6378152 Msa1272610:intron
TCATTATGAATGTGATTTGT+CGG 0.364696 8_3:-6376863 None:intergenic
TCAGTGGGTTCGGCATCTTC+AGG 0.373194 8_3:+6378162 Msa1272610:intron
GATGGATTCTTCTGAAAATT+GGG 0.373476 8_3:+6380525 Msa1272610:intron
TTCTTCTTGAAGCAATTTCC+TGG 0.380075 8_3:+6374111 Msa1272610:intron
CCTTATTCTGTTCCAAATCA+AGG 0.382934 8_3:-6374156 None:intergenic
GAAATTCTCAAAGGACTTAT+CGG 0.383309 8_3:+6380624 Msa1272610:CDS
ATCTGCGGTGATGCTATTCC+TGG 0.388358 8_3:+6377991 Msa1272610:CDS
GGTCAAGGCTCAGAATTTCT+AGG 0.389100 8_3:+6374328 Msa1272610:CDS
CAAGAAATTCATGCAGATAA+TGG 0.393619 8_3:+6376806 Msa1272610:CDS
CTTGATTTGGAACAGAATAA+GGG 0.394830 8_3:+6374157 Msa1272610:five_prime_UTR
AATCTTCAGTGTTCAACTTC+TGG 0.398745 8_3:+6379633 Msa1272610:CDS
TTGTTGTAATGTAATGTAAT+GGG 0.410367 8_3:-6373243 None:intergenic
TGTATTCCAATGGACGATAA+AGG 0.424243 8_3:+6378397 Msa1272610:CDS
TATCCTGTCATATTGCTCAT+TGG 0.450061 8_3:-6377060 None:intergenic
AAATAAAGAAGAAGAGTCAA+AGG 0.450126 8_3:-6373209 None:intergenic
TAACCATGCTGTTGAAAGTC+CGG 0.453911 8_3:+6376829 Msa1272610:CDS
ATTGACACATATTTGTCTAA+AGG 0.457743 8_3:+6379604 Msa1272610:CDS
GATTGCTGTTTCTTGTATGA+AGG 0.459963 8_3:+6374777 Msa1272610:CDS
ACTCTATTCTTAAGACGATC+AGG 0.466194 8_3:+6380556 Msa1272610:CDS
ATTTGAAAATTCTCAATGCC+AGG 0.470912 8_3:-6377970 None:intergenic
CGCTCAGGACCTAGACACTA+TGG 0.471026 8_3:+6374548 Msa1272610:CDS
AAGATAGAATTACCTTACTC+TGG 0.474605 8_3:-6381508 None:intergenic
CTGGTAAGAATCAGCTCATA+CGG 0.476287 8_3:+6374130 Msa1272610:five_prime_UTR
TGCTGGCAGAATATGGTTTG+TGG 0.488103 8_3:+6375817 Msa1272610:CDS
GACTGCTTCCTCTGTTTCTG+AGG 0.488642 8_3:+6377875 Msa1272610:CDS
TCGTTGTTAAGCCCGCGCGA+AGG 0.490974 8_3:-6374295 None:intergenic
TATATGAACCCAGGTGTTAG+TGG 0.491039 8_3:+6377081 Msa1272610:CDS
CAAAGAGAAGTTCGACGGAC+TGG 0.491588 8_3:-6378039 None:intergenic
ATCAATTAAACCATGTTGGA+AGG 0.491708 8_3:-6377766 None:intergenic
ACTGATATACAAGTAATTGT+TGG 0.496787 8_3:-6381534 None:intergenic
AACAACCTGTAATTGAATCA+TGG 0.502055 8_3:-6374226 None:intergenic
TTTGATCAATTAAACCATGT+TGG 0.502162 8_3:-6377770 None:intergenic
ATTGGCATGCAAGAGAGAAC+TGG 0.504735 8_3:+6377792 Msa1272610:CDS
CGTTGTTAAGCCCGCGCGAA+GGG 0.508565 8_3:-6374294 None:intergenic
TTCAGTATCCAACTATGTAA+AGG 0.509317 8_3:+6375860 Msa1272610:CDS
TGACGGCCTTTATCGTCCAT+TGG 0.510180 8_3:-6378403 None:intergenic
CGTATGAGCTGATTCTTACC+AGG 0.510595 8_3:-6374129 None:intergenic
GTTGTTGTAATGTAATGTAA+TGG 0.511383 8_3:-6373244 None:intergenic
CTCTAAGCACAGTGAACGCC+CGG 0.517034 8_3:+6380949 Msa1272610:CDS
AATGGACGATAAAGGCCGTC+AGG 0.517378 8_3:+6378405 Msa1272610:CDS
CATGCGACTCTTCCAGAGTA+AGG 0.517936 8_3:+6381496 Msa1272610:CDS
AACCATGTTGGAAGGAAGAT+AGG 0.523000 8_3:-6377758 None:intergenic
GGCACTAGGCAGTACATTGA+AGG 0.524560 8_3:+6378187 Msa1272610:CDS
GAATTGGAGAGTTAACTTCT+GGG 0.530167 8_3:+6376783 Msa1272610:CDS
AACTACATACTCTGGATTCG+TGG 0.536633 8_3:-6378338 None:intergenic
AACCATGCTGTTGAAAGTCC+GGG 0.539042 8_3:+6376830 Msa1272610:CDS
GGATACCAAATTAAGATAAG+TGG 0.543072 8_3:+6380577 Msa1272610:CDS
AGAGAAACACACGGAGAAGG+AGG 0.549372 8_3:-6373282 None:intergenic
CAAATCTTTCTAGATGGCCC+TGG 0.558170 8_3:+6377952 Msa1272610:intron
TTTACATCACCACTAACACC+TGG 0.560197 8_3:-6377090 None:intergenic
CTGTCATATTGCTCATTGGT+TGG 0.564575 8_3:-6377056 None:intergenic
CAATCTGTTCACGAAGGGAG+AGG 0.565208 8_3:-6374759 None:intergenic
ACAATTTGTGCTAACATGCT+CGG 0.566522 8_3:+6380911 Msa1272610:CDS
TCGGCTGTAACTACATACTC+TGG 0.571630 8_3:-6378346 None:intergenic
TGAGAAATGCAAACTAGAGA+GGG 0.576355 8_3:+6374894 Msa1272610:CDS
GGCATCTTCAGGATGGCACT+AGG 0.576862 8_3:+6378173 Msa1272610:CDS
ATCTTCATGTCATCTATGCT+AGG 0.577473 8_3:+6375792 Msa1272610:CDS
TACATAGTTGGATACTGAAG+AGG 0.577579 8_3:-6375856 None:intergenic
TTTGTCGGATTTGCGGAACC+CGG 0.579033 8_3:-6376848 None:intergenic
TGATGCACTTAATCACGCTC+AGG 0.579821 8_3:+6374533 Msa1272610:CDS
GAAAGAGAAACACACGGAGA+AGG 0.580914 8_3:-6373285 None:intergenic
AAGGCTCAGAATTTCTAGGC+AGG 0.581505 8_3:+6374332 Msa1272610:CDS
CTTAACAACGATGAGATTCA+GGG 0.582740 8_3:+6374307 Msa1272610:CDS
AGCAGTTGAGTGTATTCCAA+TGG 0.584863 8_3:+6378387 Msa1272610:CDS
GTCTCGTCATGCTCATGTGA+AGG 0.586436 8_3:-6377855 None:intergenic
AACGATGAGATTCAGGGTCA+AGG 0.586447 8_3:+6374313 Msa1272610:CDS
GACCTATCTTCCTTCCAACA+TGG 0.587812 8_3:+6377756 Msa1272610:CDS
AATGTGATTTGTCGGATTTG+CGG 0.589636 8_3:-6376855 None:intergenic
TGGTAAGAATCAGCTCATAC+GGG 0.591718 8_3:+6374131 Msa1272610:five_prime_UTR
AACCCGGACTTTCAACAGCA+TGG 0.591961 8_3:-6376832 None:intergenic
TCTGTTAAAAGCCCTTCGCG+CGG 0.592133 8_3:+6374283 Msa1272610:CDS
TTTGAAAATTCTCAATGCCA+GGG 0.594336 8_3:-6377969 None:intergenic
TACTTGTATATCAGTGACAA+TGG 0.596037 8_3:+6381542 Msa1272610:CDS
ACTGCTTCCTCTGTTTCTGA+GGG 0.597603 8_3:+6377876 Msa1272610:CDS
ATGAGAAATGCAAACTAGAG+AGG 0.598711 8_3:+6374893 Msa1272610:CDS
TTGATTTGGAACAGAATAAG+GGG 0.605933 8_3:+6374158 Msa1272610:five_prime_UTR
AACAGCAATCTGTTCACGAA+GGG 0.608091 8_3:-6374764 None:intergenic
TGGGTTCGGCATCTTCAGGA+TGG 0.610087 8_3:+6378166 Msa1272610:CDS
TATCAGTTTATCGACATCAT+CGG 0.613449 8_3:-6378365 None:intergenic
GACATGGAATGGCTTGCACA+AGG 0.615410 8_3:-6374259 None:intergenic
GACCAGCACAAAATAAAATG+TGG 0.616748 8_3:+6379181 Msa1272610:CDS
CAACCAATGAGCAATATGAC+AGG 0.619492 8_3:+6377057 Msa1272610:CDS
ACATACAAAGAGAAGTTCGA+CGG 0.621070 8_3:-6378044 None:intergenic
TACATGATCAAATACAATGG+AGG 0.622516 8_3:+6376346 Msa1272610:CDS
AGTTTCTGAGAAATTCTCAA+AGG 0.625438 8_3:+6380615 Msa1272610:CDS
TTTGTGCTAACATGCTCGGA+TGG 0.632202 8_3:+6380915 Msa1272610:CDS
AATTGTGACGAGAGACCACA+TGG 0.632894 8_3:-6380894 None:intergenic
ATCATTAATCTAGATTGCAG+AGG 0.641867 8_3:+6375758 Msa1272610:intron
GATAAGTGGTACTGAAGCTG+CGG 0.645103 8_3:+6380591 Msa1272610:CDS
TGTTGTAATGTAATGTAATG+GGG 0.650815 8_3:-6373242 None:intergenic
CTTACTCTGGAAGAGTCGCA+TGG 0.652953 8_3:-6381495 None:intergenic
TAAATTACCCTCAGAAACAG+AGG 0.657268 8_3:-6377883 None:intergenic
ACCGAAAGCAAGTACAACGT+TGG 0.658174 8_3:-6373348 None:intergenic
TTACATCACCACTAACACCT+GGG 0.665988 8_3:-6377089 None:intergenic
GAAGAGGCATTCATAACGCG+AGG 0.670089 8_3:-6375840 None:intergenic
ATGACAGGATATATGAACCC+AGG 0.675735 8_3:+6377072 Msa1272610:CDS
AAACAGCAATCTGTTCACGA+AGG 0.678830 8_3:-6374765 None:intergenic
ATTTACATGATCAAATACAA+TGG 0.689823 8_3:+6376343 Msa1272610:CDS
AGGATCGAAAGAGAAACACA+CGG 0.690557 8_3:-6373291 None:intergenic
CTGCAGATTAAAGTTCCATG+TGG 0.704102 8_3:+6380879 Msa1272610:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGGTTTTATATTAATAATT+TGG + chr8_3:6373400-6373419 Msa1272610:intron 10.0%
!!! TTTAATTAAGAAATTTCTTT+TGG + chr8_3:6374048-6374067 Msa1272610:intron 10.0%
!!! AAAATATAATAGTGTTTTTT+AGG + chr8_3:6374575-6374594 Msa1272610:intron 10.0%
!! AAATAAATTTATAATCTGAA+TGG - chr8_3:6374697-6374716 None:intergenic 10.0%
!!! ATTCTTTTTTTTTTTTTTGA+CGG - chr8_3:6376589-6376608 None:intergenic 10.0%
!! AAAAAAAAAAAAAGAATTTC+TGG + chr8_3:6376592-6376611 Msa1272610:intron 10.0%
!!! ATAATTATTTTTTTAACACT+CGG + chr8_3:6380346-6380365 Msa1272610:intron 10.0%
!! ATTAAATAAATAACCAATTT+GGG + chr8_3:6381159-6381178 Msa1272610:intron 10.0%
!!! TCTAATTATGTTTTTTTGTT+TGG + chr8_3:6373381-6373400 Msa1272610:intron 15.0%
!! TGAATTATAAAAAAATAGTG+CGG + chr8_3:6373953-6373972 Msa1272610:intron 15.0%
!! ATTATCTCAAAAAAAATTCA+GGG - chr8_3:6374615-6374634 None:intergenic 15.0%
!!! ATTATGTTAAATTGATGTTT+TGG + chr8_3:6376050-6376069 Msa1272610:intron 15.0%
!! AGTCTATATTAGTATAATTA+GGG - chr8_3:6376109-6376128 None:intergenic 15.0%
!! AAGTCTATATTAGTATAATT+AGG - chr8_3:6376110-6376129 None:intergenic 15.0%
!!! TTTTAATCCTAACTAAATAA+GGG + chr8_3:6376128-6376147 Msa1272610:intron 15.0%
!! AATATCCAAAAATTATTTAG+AGG - chr8_3:6376295-6376314 None:intergenic 15.0%
!! TTAGTTTATGAATATTGTTA+AGG + chr8_3:6377652-6377671 Msa1272610:intron 15.0%
!! TAAGTACATATATTACAAAA+TGG - chr8_3:6377714-6377733 None:intergenic 15.0%
!! TAAATTAGTTATACATATCA+TGG + chr8_3:6378436-6378455 Msa1272610:intron 15.0%
!! TGTATACATTATATGAATTA+TGG + chr8_3:6378473-6378492 Msa1272610:intron 15.0%
!!! TTTATCAACAAACATTTTTT+TGG - chr8_3:6379236-6379255 None:intergenic 15.0%
!!! GTTTTTGTTAGTTTTTTTAT+CGG + chr8_3:6379938-6379957 Msa1272610:intron 15.0%
!!! TAAAAATTGTTATTCATAGT+TGG + chr8_3:6380100-6380119 Msa1272610:intron 15.0%
!! GAGTGTTAAAAAAATAATTA+TGG - chr8_3:6380347-6380366 None:intergenic 15.0%
!! ACAAAAAAACTTAAAATCTA+TGG - chr8_3:6380717-6380736 None:intergenic 15.0%
!! CATTAAATAAATAACCAATT+TGG + chr8_3:6381158-6381177 Msa1272610:intron 15.0%
!! ATTCAAACTTACATTTAAAA+TGG - chr8_3:6381398-6381417 None:intergenic 15.0%
!! TTGTTGTAATGTAATGTAAT+GGG - chr8_3:6373246-6373265 None:intergenic 20.0%
!! AAAAAAACATAATTAGAAGC+AGG - chr8_3:6373378-6373397 None:intergenic 20.0%
!! TATCACATAATTATTGGTAA+TGG - chr8_3:6373872-6373891 None:intergenic 20.0%
!! GATTAGTATCACATAATTAT+TGG - chr8_3:6373878-6373897 None:intergenic 20.0%
!! TTATCTCAAAAAAAATTCAG+GGG - chr8_3:6374614-6374633 None:intergenic 20.0%
!! CATTATCTCAAAAAAAATTC+AGG - chr8_3:6374616-6374635 None:intergenic 20.0%
!! CAGATTATAAATTTATTTCC+AGG + chr8_3:6374699-6374718 Msa1272610:intron 20.0%
!! ATTAAGTTATATCTACTTCA+AGG + chr8_3:6374818-6374837 Msa1272610:intron 20.0%
!! AGGTAATCAACTTAATTTAA+CGG + chr8_3:6374848-6374867 Msa1272610:intron 20.0%
!!! TTACATGCCATATTTTTATT+AGG + chr8_3:6375007-6375026 Msa1272610:intron 20.0%
!! TCAATTGCCTAATAAAAATA+TGG - chr8_3:6375017-6375036 None:intergenic 20.0%
!! GTGTATTGAAAAATAAGTTA+TGG - chr8_3:6375240-6375259 None:intergenic 20.0%
!! TATAAAAGAATGAAACTACT+AGG - chr8_3:6375339-6375358 None:intergenic 20.0%
!!! CTATTTTCTATTTTACAAAG+CGG - chr8_3:6375574-6375593 None:intergenic 20.0%
!! CCTAAAATTTAAACATGATA+CGG - chr8_3:6375986-6376005 None:intergenic 20.0%
!!! CATGTTTAAATTTTAGGTTT+AGG + chr8_3:6375989-6376008 Msa1272610:intron 20.0%
!!! CTTTTAATCCTAACTAAATA+AGG + chr8_3:6376127-6376146 Msa1272610:intron 20.0%
!!! AGAGATTTTATCTTACTTTT+AGG - chr8_3:6376166-6376185 None:intergenic 20.0%
!! AGAATCATGTATTATAGATT+AGG - chr8_3:6376269-6376288 None:intergenic 20.0%
!! ATTTACATGATCAAATACAA+TGG + chr8_3:6376343-6376362 Msa1272610:CDS 20.0%
!! TGATAAACACAAATAATATG+AGG - chr8_3:6376935-6376954 None:intergenic 20.0%
!! ATTGTAGTTATTAGTTGTTA+GGG - chr8_3:6377355-6377374 None:intergenic 20.0%
!!! TTCTTTTTTTTTTAATGGAG+TGG + chr8_3:6378261-6378280 Msa1272610:intron 20.0%
!!! TTTTTTAAGTACGTTTTTCT+TGG + chr8_3:6378307-6378326 Msa1272610:intron 20.0%
!!! TAATTTATTTTCAAACCTGA+CGG - chr8_3:6378423-6378442 None:intergenic 20.0%
!!! TAATTTTACCACTTGTATAA+TGG + chr8_3:6378596-6378615 Msa1272610:intron 20.0%
!!! TATCACTCAGATTTTTTTTT+TGG + chr8_3:6379109-6379128 Msa1272610:intron 20.0%
!!! AAAAATGTTTGTTGATAAAC+TGG + chr8_3:6379237-6379256 Msa1272610:intron 20.0%
!! AACTAATTTGAAGAAATTTC+TGG - chr8_3:6379363-6379382 None:intergenic 20.0%
!! AAGTGAAACATATAATACAT+TGG + chr8_3:6379766-6379785 Msa1272610:intron 20.0%
!! TTTACCAAATACATTGAAAA+AGG + chr8_3:6379798-6379817 Msa1272610:intron 20.0%
!!! CTTTTAGAAATGATATTGAA+CGG - chr8_3:6380436-6380455 None:intergenic 20.0%
!!! ATATCATTTCTAAAAGATAC+AGG + chr8_3:6380440-6380459 Msa1272610:intron 20.0%
!! AATGCAAATTAAGATGAATA+AGG - chr8_3:6380478-6380497 None:intergenic 20.0%
!! ATTTCTGTTGTAAAAGTTAT+AGG + chr8_3:6380659-6380678 Msa1272610:intron 20.0%
!! TGTTAGTCATGTATTTAAAA+TGG - chr8_3:6381427-6381446 None:intergenic 20.0%
!! TAACTATCATCTACAATATT+AGG - chr8_3:6381583-6381602 None:intergenic 20.0%
!!! AATAACTGCAATTCATTTTA+GGG - chr8_3:6381629-6381648 None:intergenic 20.0%
! AAATAAAGAAGAAGAGTCAA+AGG - chr8_3:6373212-6373231 None:intergenic 25.0%
! TGTTGTAATGTAATGTAATG+GGG - chr8_3:6373245-6373264 None:intergenic 25.0%
! GTTGTTGTAATGTAATGTAA+TGG - chr8_3:6373247-6373266 None:intergenic 25.0%
!! TTATAGAGTTCTTAACCTTT+TGG + chr8_3:6373508-6373527 Msa1272610:intron 25.0%
! TAACAATAACAACTTATCCA+AGG - chr8_3:6374075-6374094 None:intergenic 25.0%
! GACAAAATGCAGAAATTTAT+TGG + chr8_3:6374193-6374212 Msa1272610:five_prime_UTR 25.0%
!!! AATTACAGGTTGTTTTGAAT+AGG + chr8_3:6374235-6374254 Msa1272610:five_prime_UTR 25.0%
!! ATTTTATTACCATAGTGTCT+AGG - chr8_3:6374560-6374579 None:intergenic 25.0%
!!! TCAGCATTTTATTTCTACTA+CGG + chr8_3:6375157-6375176 Msa1272610:intron 25.0%
!! TTTTCATACCTTTACATAGT+TGG - chr8_3:6375871-6375890 None:intergenic 25.0%
! TGCTTGATAAATGATAAACA+GGG + chr8_3:6375896-6375915 Msa1272610:intron 25.0%
!! CCGTATCATGTTTAAATTTT+AGG + chr8_3:6375983-6376002 Msa1272610:intron 25.0%
!!! ATTTTAGGTTTAGGTAAAGA+AGG + chr8_3:6375998-6376017 Msa1272610:intron 25.0%
!! CTCTTCCTCTAAATAATTTT+TGG + chr8_3:6376287-6376306 Msa1272610:intron 25.0%
!! GGATATTCTAACATTTTGTA+TGG + chr8_3:6376308-6376327 Msa1272610:intron 25.0%
! ATAGAATGACACAAATTATG+CGG - chr8_3:6376413-6376432 None:intergenic 25.0%
!! ATCTCTCTGATTGAAATTTT+TGG + chr8_3:6376440-6376459 Msa1272610:intron 25.0%
! TAAGTCATTCTTGAAGTTAA+TGG + chr8_3:6376712-6376731 Msa1272610:intron 25.0%
!!! AAGATCAGTGATTACTTTTT+TGG + chr8_3:6376752-6376771 Msa1272610:intron 25.0%
!! TCATTATGAATGTGATTTGT+CGG - chr8_3:6376866-6376885 None:intergenic 25.0%
! TCACATTCATAATGATTTCA+TGG + chr8_3:6376871-6376890 Msa1272610:CDS 25.0%
! TTCATAATGATTTCATGGTA+TGG + chr8_3:6376876-6376895 Msa1272610:intron 25.0%
! GTTAGAGTATGTGTATAAAT+AGG - chr8_3:6377309-6377328 None:intergenic 25.0%
!!! AGGGAAGTTAGTTTTTTATT+TGG - chr8_3:6377336-6377355 None:intergenic 25.0%
! GATTGTAGTTATTAGTTGTT+AGG - chr8_3:6377356-6377375 None:intergenic 25.0%
! TGTTAGGATTACAGAATAAA+GGG - chr8_3:6377433-6377452 None:intergenic 25.0%
! ATGTTAGGATTACAGAATAA+AGG - chr8_3:6377434-6377453 None:intergenic 25.0%
! GTAATATATGTACTTATCCA+CGG + chr8_3:6377718-6377737 Msa1272610:intron 25.0%
! TTTGATCAATTAAACCATGT+TGG - chr8_3:6377773-6377792 None:intergenic 25.0%
! CATGGTTTAATTGATCAAAT+TGG + chr8_3:6377774-6377793 Msa1272610:CDS 25.0%
!! GGTGAAAGACAATTTTTAAA+TGG + chr8_3:6377813-6377832 Msa1272610:CDS 25.0%
!! ATTGAGAATTTTCAAATCTG+CGG + chr8_3:6377976-6377995 Msa1272610:CDS 25.0%
! GATGAAAAGTTAAATACCAA+TGG - chr8_3:6378087-6378106 None:intergenic 25.0%
! AGAAGAGAAGGAAATTAATA+TGG - chr8_3:6378109-6378128 None:intergenic 25.0%
! ACTGATATCATTATAATTCC+TGG + chr8_3:6378132-6378151 Msa1272610:intron 25.0%
! CTGATATCATTATAATTCCT+GGG + chr8_3:6378133-6378152 Msa1272610:intron 25.0%
!! AACCATGTGAATTTTTCTAA+AGG + chr8_3:6379422-6379441 Msa1272610:intron 25.0%
! ATTGACACATATTTGTCTAA+AGG + chr8_3:6379604-6379623 Msa1272610:CDS 25.0%
! CTCAGATCATGTTTAATATA+TGG + chr8_3:6379690-6379709 Msa1272610:intron 25.0%
!!! AACTCCTTTTTCAATGTATT+TGG - chr8_3:6379805-6379824 None:intergenic 25.0%
! TTTCCACAATTTCTGTTATT+AGG + chr8_3:6379971-6379990 Msa1272610:intron 25.0%
!! TGTATTTTGTTCACTATTCT+GGG - chr8_3:6380250-6380269 None:intergenic 25.0%
! GTACTATTAAACACATGAAA+TGG + chr8_3:6380296-6380315 Msa1272610:intron 25.0%
! AACACAGTAAATGTAATTAC+CGG - chr8_3:6380971-6380990 None:intergenic 25.0%
!! TTTTATCTTAAAAGTAGCAC+CGG + chr8_3:6381111-6381130 Msa1272610:intron 25.0%
!!! TGCACCATAAAATTTGTTTT+GGG - chr8_3:6381246-6381265 None:intergenic 25.0%
!!! ATGCACCATAAAATTTGTTT+TGG - chr8_3:6381247-6381266 None:intergenic 25.0%
! ACTGATATACAAGTAATTGT+TGG - chr8_3:6381537-6381556 None:intergenic 25.0%
!! CAATAACTGCAATTCATTTT+AGG - chr8_3:6381630-6381649 None:intergenic 25.0%
!!! TTTTGTTGTTCTGTGATTCA+TGG + chr8_3:6373434-6373453 Msa1272610:intron 30.0%
!! TTTGTTGTTCTGTGATTCAT+GGG + chr8_3:6373435-6373454 Msa1272610:intron 30.0%
!!! AGTTCTTAACCTTTTGGAAT+TGG + chr8_3:6373514-6373533 Msa1272610:intron 30.0%
!!! AACCTTTTGGAATTGGAATA+AGG + chr8_3:6373521-6373540 Msa1272610:intron 30.0%
TCAGAATTGTGTATTTAGTG+TGG + chr8_3:6373583-6373602 Msa1272610:intron 30.0%
CACAACATGTTAAAACTCTT+AGG - chr8_3:6373740-6373759 None:intergenic 30.0%
!! CTAAGAGTTTTAACATGTTG+TGG + chr8_3:6373738-6373757 Msa1272610:intron 30.0%
!! GATTTTGAGTGTATTGTGTA+CGG - chr8_3:6373989-6374008 None:intergenic 30.0%
ACAATACACTCAAAATCTCA+GGG + chr8_3:6373992-6374011 Msa1272610:intron 30.0%
! AAGAAATTTCTTTTGGTCCT+TGG + chr8_3:6374055-6374074 Msa1272610:intron 30.0%
! AGTTGTTATTGTTAACTCCT+TGG + chr8_3:6374081-6374100 Msa1272610:intron 30.0%
!! CTTGATTTGGAACAGAATAA+GGG + chr8_3:6374157-6374176 Msa1272610:five_prime_UTR 30.0%
!! TTGATTTGGAACAGAATAAG+GGG + chr8_3:6374158-6374177 Msa1272610:five_prime_UTR 30.0%
ATCAACCATGATTCAATTAC+AGG + chr8_3:6374221-6374240 Msa1272610:five_prime_UTR 30.0%
AACAACCTGTAATTGAATCA+TGG - chr8_3:6374229-6374248 None:intergenic 30.0%
! TTTTAACAGAAGACATGGAA+TGG - chr8_3:6374273-6374292 None:intergenic 30.0%
!!! GATGTTTTTTGCATCTTCTA+AGG - chr8_3:6374667-6374686 None:intergenic 30.0%
! ATCTACTTCAAGGACATTTT+AGG + chr8_3:6374828-6374847 Msa1272610:intron 30.0%
! GGAATTTTCGGAATTAAGAA+TGG + chr8_3:6374915-6374934 Msa1272610:CDS 30.0%
TAGACTCACTTTCAAATCAT+GGG - chr8_3:6375123-6375142 None:intergenic 30.0%
!!! CAGCATTTTATTTCTACTAC+GGG + chr8_3:6375158-6375177 Msa1272610:intron 30.0%
TGACGAGTAACTAAAGAAAT+TGG - chr8_3:6375199-6375218 None:intergenic 30.0%
TAAACTGATCTATTTCGACA+AGG + chr8_3:6375361-6375380 Msa1272610:intron 30.0%
TAAAATAGAAAATAGAGCCG+CGG + chr8_3:6375579-6375598 Msa1272610:intron 30.0%
!! ATTTTAATGAATGCGCTATG+CGG - chr8_3:6375619-6375638 None:intergenic 30.0%
ATCATTAATCTAGATTGCAG+AGG + chr8_3:6375758-6375777 Msa1272610:intron 30.0%
TTCAGTATCCAACTATGTAA+AGG + chr8_3:6375860-6375879 Msa1272610:CDS 30.0%
GTGCTTGATAAATGATAAAC+AGG + chr8_3:6375895-6375914 Msa1272610:intron 30.0%
! GGCTTTTATTGAGATTTTGA+TGG + chr8_3:6375917-6375936 Msa1272610:intron 30.0%
TTTAGGTAAAGAAGGAGAAA+AGG + chr8_3:6376006-6376025 Msa1272610:intron 30.0%
! ATTTGCACCCTTATTTAGTT+AGG - chr8_3:6376138-6376157 None:intergenic 30.0%
AAATCTCTTAGAATGAGACT+TGG + chr8_3:6376178-6376197 Msa1272610:intron 30.0%
!!! CTTGTGTTACCTTATTTTCT+CGG - chr8_3:6376222-6376241 None:intergenic 30.0%
GTATTTGATCATGTAAATGC+TGG - chr8_3:6376341-6376360 None:intergenic 30.0%
TACATGATCAAATACAATGG+AGG + chr8_3:6376346-6376365 Msa1272610:CDS 30.0%
!!! TTTTTTGGACAGGATAGAAT+TGG + chr8_3:6376767-6376786 Msa1272610:intron 30.0%
CAAGAAATTCATGCAGATAA+TGG + chr8_3:6376806-6376825 Msa1272610:CDS 30.0%
! ATTGCCAATAAGATTTTGCT+GGG - chr8_3:6377025-6377044 None:intergenic 30.0%
! TAACTTTTGTCGAGACATTA+TGG - chr8_3:6377184-6377203 None:intergenic 30.0%
ATGTCTCGACAAAAGTTAAA+TGG + chr8_3:6377186-6377205 Msa1272610:intron 30.0%
!! AGTTAAATGGATTAGCCTTA+TGG + chr8_3:6377199-6377218 Msa1272610:intron 30.0%
! AGAGTATTCTCTATTGTGAA+GGG - chr8_3:6377239-6377258 None:intergenic 30.0%
! TAGAGTATTCTCTATTGTGA+AGG - chr8_3:6377240-6377259 None:intergenic 30.0%
GTTAGGAGTTTATCTTTAAG+AGG + chr8_3:6377503-6377522 Msa1272610:intron 30.0%
ATCAATTAAACCATGTTGGA+AGG - chr8_3:6377769-6377788 None:intergenic 30.0%
ACAAGTCAAATCTTTCTAGA+TGG + chr8_3:6377946-6377965 Msa1272610:intron 30.0%
TTTGAAAATTCTCAATGCCA+GGG - chr8_3:6377972-6377991 None:intergenic 30.0%
ATTTGAAAATTCTCAATGCC+AGG - chr8_3:6377973-6377992 None:intergenic 30.0%
AACTTCTCTTTGTATGTTTC+AGG + chr8_3:6378050-6378069 Msa1272610:CDS 30.0%
TCAGGTAAAATTCTTTCCAT+TGG + chr8_3:6378068-6378087 Msa1272610:intron 30.0%
GATATCAGTAATAGAAGAGA+AGG - chr8_3:6378121-6378140 None:intergenic 30.0%
TATCAGTTTATCGACATCAT+CGG - chr8_3:6378368-6378387 None:intergenic 30.0%
ATGAATTATGGCTCAATCTA+TGG + chr8_3:6378485-6378504 Msa1272610:intron 30.0%
TCTGACAACATAATAGAACT+CGG + chr8_3:6378628-6378647 Msa1272610:intron 30.0%
AGAAAGTGAAGTTAAAAGTG+AGG + chr8_3:6378678-6378697 Msa1272610:intron 30.0%
AGTTCAGAAGCTAGTTAATT+AGG - chr8_3:6378770-6378789 None:intergenic 30.0%
AACCAATAGTTGTAACAGTA+TGG + chr8_3:6378790-6378809 Msa1272610:intron 30.0%
AGGGCTGCAAAATTTAAATA+TGG + chr8_3:6378915-6378934 Msa1272610:intron 30.0%
! CTGTGCTAAAGTATTAATGA+AGG + chr8_3:6378964-6378983 Msa1272610:intron 30.0%
ATAAATGAGAAGGCAATATG+AGG - chr8_3:6379052-6379071 None:intergenic 30.0%
GCATATAACGATAAATGAGA+AGG - chr8_3:6379062-6379081 None:intergenic 30.0%
GTGATATTCTTATGATGTCT+AGG - chr8_3:6379095-6379114 None:intergenic 30.0%
!!! TACCACATTTTATTTTGTGC+TGG - chr8_3:6379186-6379205 None:intergenic 30.0%
! TGCCTTTAGAAAAATTCACA+TGG - chr8_3:6379427-6379446 None:intergenic 30.0%
CATTTATGCTTGAACAACTT+AGG + chr8_3:6379445-6379464 Msa1272610:intron 30.0%
AACATGATCTGAGAACTAAA+AGG - chr8_3:6379683-6379702 None:intergenic 30.0%
TGTCCTAATAACAGAAATTG+TGG - chr8_3:6379977-6379996 None:intergenic 30.0%
ACAATTTCTGTTATTAGGAC+AGG + chr8_3:6379976-6379995 Msa1272610:intron 30.0%
GTATACATATCTACATTGCA+TGG - chr8_3:6380060-6380079 None:intergenic 30.0%
ATGTATACTTTGATGCATGA+AGG + chr8_3:6380072-6380091 Msa1272610:intron 30.0%
GAAACTTTGTGTAAGAAGAT+TGG - chr8_3:6380179-6380198 None:intergenic 30.0%
! GTATTTTGTTCACTATTCTG+GGG - chr8_3:6380249-6380268 None:intergenic 30.0%
! CTGTATTTTGTTCACTATTC+TGG - chr8_3:6380251-6380270 None:intergenic 30.0%
AAAAGTGAATAGAACAAACG+AGG - chr8_3:6380402-6380421 None:intergenic 30.0%
! AGATGGATTCTTCTGAAAAT+TGG + chr8_3:6380524-6380543 Msa1272610:intron 30.0%
! GATGGATTCTTCTGAAAATT+GGG + chr8_3:6380525-6380544 Msa1272610:intron 30.0%
GGATACCAAATTAAGATAAG+TGG + chr8_3:6380577-6380596 Msa1272610:CDS 30.0%
CAGTACCACTTATCTTAATT+TGG - chr8_3:6380585-6380604 None:intergenic 30.0%
! AGTTTCTGAGAAATTCTCAA+AGG + chr8_3:6380615-6380634 Msa1272610:CDS 30.0%
GAAATTCTCAAAGGACTTAT+CGG + chr8_3:6380624-6380643 Msa1272610:CDS 30.0%
AAAAGTTATAGGCAATACCT+TGG + chr8_3:6380670-6380689 Msa1272610:intron 30.0%
AAAGTTATAGGCAATACCTT+GGG + chr8_3:6380671-6380690 Msa1272610:intron 30.0%
AGATAATCCATAAAAGGAGA+TGG - chr8_3:6380861-6380880 None:intergenic 30.0%
ATCTGCAGATAATCCATAAA+AGG - chr8_3:6380867-6380886 None:intergenic 30.0%
ACACAGTAAATGTAATTACC+GGG - chr8_3:6380970-6380989 None:intergenic 30.0%
!!! TGTTTTAATCCACATACCAT+TGG + chr8_3:6381066-6381085 Msa1272610:intron 30.0%
!!! ACCATAAAATTTGTTTTGGG+GGG - chr8_3:6381243-6381262 None:intergenic 30.0%
!!! CACCATAAAATTTGTTTTGG+GGG - chr8_3:6381244-6381263 None:intergenic 30.0%
!!! GCACCATAAAATTTGTTTTG+GGG - chr8_3:6381245-6381264 None:intergenic 30.0%
AAGATAGAATTACCTTACTC+TGG - chr8_3:6381511-6381530 None:intergenic 30.0%
TACTTGTATATCAGTGACAA+TGG + chr8_3:6381542-6381561 Msa1272610:CDS 30.0%
GAAGAGTCAAAGGAGAAATT+TGG - chr8_3:6373202-6373221 None:intergenic 35.0%
TGTTGGGTCAAAAAAGAAAC+AGG - chr8_3:6373314-6373333 None:intergenic 35.0%
!!! GTTTCTTTTTTGACCCAACA+AGG + chr8_3:6373314-6373333 Msa1272610:five_prime_UTR 35.0%
GGCAAAAAAAACACCTTGTT+GGG - chr8_3:6373330-6373349 None:intergenic 35.0%
TGGCAAAAAAAACACCTTGT+TGG - chr8_3:6373331-6373350 None:intergenic 35.0%
CACCTTATTCCAATTCCAAA+AGG - chr8_3:6373526-6373545 None:intergenic 35.0%
GTGTATTTAGTGTGGTGAAA+TGG + chr8_3:6373591-6373610 Msa1272610:intron 35.0%
CATATGTGATACAATCAACG+AGG - chr8_3:6373812-6373831 None:intergenic 35.0%
CACAATACACTCAAAATCTC+AGG + chr8_3:6373991-6374010 Msa1272610:intron 35.0%
TCAAGAAGAAACAGATACCA+AGG - chr8_3:6374101-6374120 None:intergenic 35.0%
TTCTTCTTGAAGCAATTTCC+TGG + chr8_3:6374111-6374130 Msa1272610:intron 35.0%
CCTTATTCTGTTCCAAATCA+AGG - chr8_3:6374159-6374178 None:intergenic 35.0%
!! CCTTGATTTGGAACAGAATA+AGG + chr8_3:6374156-6374175 Msa1272610:five_prime_UTR 35.0%
CTTAACAACGATGAGATTCA+GGG + chr8_3:6374307-6374326 Msa1272610:CDS 35.0%
!!! TAACTGTTGCCTTGGTTTTA+TGG + chr8_3:6374393-6374412 Msa1272610:intron 35.0%
CATTCCAATCCATAAAACCA+AGG - chr8_3:6374405-6374424 None:intergenic 35.0%
GCACAATCTTGAAAAACAAC+TGG + chr8_3:6374488-6374507 Msa1272610:CDS 35.0%
!! GATTGCTGTTTCTTGTATGA+AGG + chr8_3:6374777-6374796 Msa1272610:CDS 35.0%
CAACTTAATTTAACGGTTGC+AGG + chr8_3:6374855-6374874 Msa1272610:intron 35.0%
ATGAGAAATGCAAACTAGAG+AGG + chr8_3:6374893-6374912 Msa1272610:CDS 35.0%
TGAGAAATGCAAACTAGAGA+GGG + chr8_3:6374894-6374913 Msa1272610:CDS 35.0%
! CAAACTAGAGAGGGAATTTT+CGG + chr8_3:6374903-6374922 Msa1272610:CDS 35.0%
AGCACAACTTACAAAAGACA+TGG - chr8_3:6374946-6374965 None:intergenic 35.0%
CTAGACTCACTTTCAAATCA+TGG - chr8_3:6375124-6375143 None:intergenic 35.0%
TCGTCATTCATGATGATATG+AGG + chr8_3:6375213-6375232 Msa1272610:intron 35.0%
CAATACGCTAATGATAACAC+TGG - chr8_3:6375526-6375545 None:intergenic 35.0%
GTGTTATCATTAGCGTATTG+TGG + chr8_3:6375526-6375545 Msa1272610:intron 35.0%
AAAATAGAAAATAGAGCCGC+GGG + chr8_3:6375580-6375599 Msa1272610:intron 35.0%
CACACAACATATACAGATAG+TGG - chr8_3:6375642-6375661 None:intergenic 35.0%
CACTATCTGTATATGTTGTG+TGG + chr8_3:6375640-6375659 Msa1272610:intron 35.0%
ATCTTCATGTCATCTATGCT+AGG + chr8_3:6375792-6375811 Msa1272610:CDS 35.0%
TACATAGTTGGATACTGAAG+AGG - chr8_3:6375859-6375878 None:intergenic 35.0%
TGCACACACACATCAAATTA+AGG + chr8_3:6375952-6375971 Msa1272610:intron 35.0%
TGTGATACAACGTACTAACT+CGG + chr8_3:6376080-6376099 Msa1272610:intron 35.0%
ACTTGGTTACTAACAAGACA+GGG + chr8_3:6376195-6376214 Msa1272610:intron 35.0%
ATCATGTTAAGAAGCTACCA+GGG - chr8_3:6376632-6376651 None:intergenic 35.0%
AATCATGTTAAGAAGCTACC+AGG - chr8_3:6376633-6376652 None:intergenic 35.0%
!!! CAGTGATTACTTTTTTGGAC+AGG + chr8_3:6376757-6376776 Msa1272610:intron 35.0%
AGAATTGGAGAGTTAACTTC+TGG + chr8_3:6376782-6376801 Msa1272610:CDS 35.0%
GAATTGGAGAGTTAACTTCT+GGG + chr8_3:6376783-6376802 Msa1272610:CDS 35.0%
! AATGTGATTTGTCGGATTTG+CGG - chr8_3:6376858-6376877 None:intergenic 35.0%
ATTTCATGGTATGGTACTGT+TGG + chr8_3:6376885-6376904 Msa1272610:intron 35.0%
ATTCCCCAGCAAAATCTTAT+TGG + chr8_3:6377018-6377037 Msa1272610:CDS 35.0%
! TTGCCAATAAGATTTTGCTG+GGG - chr8_3:6377024-6377043 None:intergenic 35.0%
! CATTGCCAATAAGATTTTGC+TGG - chr8_3:6377026-6377045 None:intergenic 35.0%
TATCCTGTCATATTGCTCAT+TGG - chr8_3:6377063-6377082 None:intergenic 35.0%
AGATTTCTAATGCTGCTGAT+AGG + chr8_3:6377142-6377161 Msa1272610:intron 35.0%
!! ATTAGCCTTATGGTTGTCAA+GGG + chr8_3:6377209-6377228 Msa1272610:intron 35.0%
GAGTATTCTCTATTGTGAAG+GGG - chr8_3:6377238-6377257 None:intergenic 35.0%
CGACTCACAGTTATTATGTT+AGG - chr8_3:6377449-6377468 None:intergenic 35.0%
GAGAGAGTTGTGTAAAAGTT+AGG + chr8_3:6377486-6377505 Msa1272610:intron 35.0%
GAAGAACAAATCCTAACCAT+TGG + chr8_3:6377546-6377565 Msa1272610:intron 35.0%
AAATCCTAACCATTGGATCA+GGG + chr8_3:6377553-6377572 Msa1272610:intron 35.0%
TAAATTACCCTCAGAAACAG+AGG - chr8_3:6377886-6377905 None:intergenic 35.0%
ATTCCTGGAGAAAAACTTCT+TGG + chr8_3:6378006-6378025 Msa1272610:CDS 35.0%
ACATACAAAGAGAAGTTCGA+CGG - chr8_3:6378047-6378066 None:intergenic 35.0%
! AAGTACGTTTTTCTTGGATC+AGG + chr8_3:6378313-6378332 Msa1272610:intron 35.0%
TGTATTCCAATGGACGATAA+AGG + chr8_3:6378397-6378416 Msa1272610:CDS 35.0%
CTGAGTAACCATTATACAAG+TGG - chr8_3:6378607-6378626 None:intergenic 35.0%
AGCCATACTGTTACAACTAT+TGG - chr8_3:6378795-6378814 None:intergenic 35.0%
! ATGATCCACATATTGGTAAC+CGG - chr8_3:6378822-6378841 None:intergenic 35.0%
ACTCGCTCAAATTGCATAAA+CGG + chr8_3:6378843-6378862 Msa1272610:intron 35.0%
TTATGCAATATCCTAGCTAG+TGG + chr8_3:6378876-6378895 Msa1272610:intron 35.0%
TATGCAATATCCTAGCTAGT+GGG + chr8_3:6378877-6378896 Msa1272610:intron 35.0%
! ATGATGTCTAGGACAGAAAT+TGG - chr8_3:6379084-6379103 None:intergenic 35.0%
TCGATTCTGTTATCTTTGTC+AGG + chr8_3:6379132-6379151 Msa1272610:intron 35.0%
CGATTCTGTTATCTTTGTCA+GGG + chr8_3:6379133-6379152 Msa1272610:intron 35.0%
GATTCTGTTATCTTTGTCAG+GGG + chr8_3:6379134-6379153 Msa1272610:intron 35.0%
ATTCTGTTATCTTTGTCAGG+GGG + chr8_3:6379135-6379154 Msa1272610:intron 35.0%
GACCAGCACAAAATAAAATG+TGG + chr8_3:6379181-6379200 Msa1272610:CDS 35.0%
!! CACACACTCTAAAATTCACA+TGG - chr8_3:6379291-6379310 None:intergenic 35.0%
CATGACATGTTAGACTTACA+CGG + chr8_3:6379392-6379411 Msa1272610:intron 35.0%
ATGACATGTTAGACTTACAC+GGG + chr8_3:6379393-6379412 Msa1272610:intron 35.0%
! CATTTCTGGGTCTATAAAGT+TGG - chr8_3:6379575-6379594 None:intergenic 35.0%
AATCTTCAGTGTTCAACTTC+TGG + chr8_3:6379633-6379652 Msa1272610:CDS 35.0%
! CTGGTAGGTTTTCTTTTTGT+TGG + chr8_3:6379652-6379671 Msa1272610:intron 35.0%
! TATGGTTCCTTTTAGTGTAC+TGG + chr8_3:6379708-6379727 Msa1272610:intron 35.0%
!!! TCCTTTTAGTGTACTGGTTA+AGG + chr8_3:6379714-6379733 Msa1272610:intron 35.0%
TCCTTAACCAGTACACTAAA+AGG - chr8_3:6379718-6379737 None:intergenic 35.0%
TTTCTGTTATTAGGACAGGT+AGG + chr8_3:6379980-6379999 Msa1272610:intron 35.0%
TATTGTTCCCTACACATCTT+AGG + chr8_3:6380003-6380022 Msa1272610:intron 35.0%
! GAATGCTTGGATTTTACAAG+GGG - chr8_3:6380213-6380232 None:intergenic 35.0%
! GGAATGCTTGGATTTTACAA+GGG - chr8_3:6380214-6380233 None:intergenic 35.0%
! AGGAATGCTTGGATTTTACA+AGG - chr8_3:6380215-6380234 None:intergenic 35.0%
! TTTGCATTCGTCACATTTTG+CGG + chr8_3:6380490-6380509 Msa1272610:intron 35.0%
!!! TTGCGGTTATTTTTGACAGA+TGG + chr8_3:6380507-6380526 Msa1272610:intron 35.0%
ACTCTATTCTTAAGACGATC+AGG + chr8_3:6380556-6380575 Msa1272610:CDS 35.0%
! TTTCAAGAGTTTTACACCCA+AGG - chr8_3:6380690-6380709 None:intergenic 35.0%
! ATACGTTCCATCTCCTTTTA+TGG + chr8_3:6380851-6380870 Msa1272610:intron 35.0%
ACAATTTGTGCTAACATGCT+CGG + chr8_3:6380911-6380930 Msa1272610:CDS 35.0%
! TTTACTGTGTTTCAAGTCCA+TGG + chr8_3:6380980-6380999 Msa1272610:intron 35.0%
AGACTAATTCCAATGGTATG+TGG - chr8_3:6381078-6381097 None:intergenic 35.0%
!!! ATAAAATTTGTTTTGGGGGG+GGG - chr8_3:6381240-6381259 None:intergenic 35.0%
!!! CATAAAATTTGTTTTGGGGG+GGG - chr8_3:6381241-6381260 None:intergenic 35.0%
!!! CCATAAAATTTGTTTTGGGG+GGG - chr8_3:6381242-6381261 None:intergenic 35.0%
CATTAGAAACTCAGCTTTCT+AGG + chr8_3:6381264-6381283 Msa1272610:intron 35.0%
!! ACTGCAATTCATTTTAGGGA+TGG - chr8_3:6381625-6381644 None:intergenic 35.0%
AGGATCGAAAGAGAAACACA+CGG - chr8_3:6373294-6373313 None:intergenic 40.0%
!! TCACGTGGATGAGTTGTTTT+TGG + chr8_3:6373639-6373658 Msa1272610:intron 40.0%
TTATCATCTTCGCGTTACAG+TGG + chr8_3:6373670-6373689 Msa1272610:intron 40.0%
CTGGTAAGAATCAGCTCATA+CGG + chr8_3:6374130-6374149 Msa1272610:five_prime_UTR 40.0%
TGGTAAGAATCAGCTCATAC+GGG + chr8_3:6374131-6374150 Msa1272610:five_prime_UTR 40.0%
! AGGGCTTTTAACAGAAGACA+TGG - chr8_3:6374278-6374297 None:intergenic 40.0%
GCTTAACAACGATGAGATTC+AGG + chr8_3:6374306-6374325 Msa1272610:CDS 40.0%
CGTAATGTTAACTGTTGCCT+TGG + chr8_3:6374385-6374404 Msa1272610:intron 40.0%
!!! GTTGCCTTGGTTTTATGGAT+TGG + chr8_3:6374398-6374417 Msa1272610:intron 40.0%
TAGCCAAAGTAGTCCTTACA+AGG + chr8_3:6374443-6374462 Msa1272610:intron 40.0%
! AAGCCTTGTAAGGACTACTT+TGG - chr8_3:6374449-6374468 None:intergenic 40.0%
TTGCTCGTGAAAAAAGTTCC+TGG - chr8_3:6374720-6374739 None:intergenic 40.0%
!!! AGGAACTTTTTTCACGAGCA+AGG + chr8_3:6374719-6374738 Msa1272610:intron 40.0%
!!! GGAACTTTTTTCACGAGCAA+GGG + chr8_3:6374720-6374739 Msa1272610:intron 40.0%
!!! GAACTTTTTTCACGAGCAAG+GGG + chr8_3:6374721-6374740 Msa1272610:CDS 40.0%
!!! AACTTTTTTCACGAGCAAGG+GGG + chr8_3:6374722-6374741 Msa1272610:CDS 40.0%
AACAGCAATCTGTTCACGAA+GGG - chr8_3:6374767-6374786 None:intergenic 40.0%
AAACAGCAATCTGTTCACGA+AGG - chr8_3:6374768-6374787 None:intergenic 40.0%
AATGATCTTGCTCGAAGGAA+AGG + chr8_3:6375071-6375090 Msa1272610:intron 40.0%
ATTTCGACAAGGTTTCACAC+TGG + chr8_3:6375372-6375391 Msa1272610:intron 40.0%
GGAATCTCCTCATGTATTTC+TGG + chr8_3:6375661-6375680 Msa1272610:intron 40.0%
! GACTTGGTTACTAACAAGAC+AGG + chr8_3:6376194-6376213 Msa1272610:intron 40.0%
GTTTCCTGCTTCATGCATTT+CGG + chr8_3:6376558-6376577 Msa1272610:intron 40.0%
TTTCCTGCTTCATGCATTTC+GGG + chr8_3:6376559-6376578 Msa1272610:intron 40.0%
TAACCATGCTGTTGAAAGTC+CGG + chr8_3:6376829-6376848 Msa1272610:CDS 40.0%
CTGTCATATTGCTCATTGGT+TGG - chr8_3:6377059-6377078 None:intergenic 40.0%
CAACCAATGAGCAATATGAC+AGG + chr8_3:6377057-6377076 Msa1272610:CDS 40.0%
ATGACAGGATATATGAACCC+AGG + chr8_3:6377072-6377091 Msa1272610:CDS 40.0%
TATATGAACCCAGGTGTTAG+TGG + chr8_3:6377081-6377100 Msa1272610:CDS 40.0%
TTACATCACCACTAACACCT+GGG - chr8_3:6377092-6377111 None:intergenic 40.0%
TTTACATCACCACTAACACC+TGG - chr8_3:6377093-6377112 None:intergenic 40.0%
! GGTGTTAGTGGTGATGTAAA+CGG + chr8_3:6377093-6377112 Msa1272610:intron 40.0%
! ATGTAAACGGAGCATTCAGA+AGG + chr8_3:6377106-6377125 Msa1272610:intron 40.0%
! TGTAAACGGAGCATTCAGAA+GGG + chr8_3:6377107-6377126 Msa1272610:intron 40.0%
ATTCAGAAGGGTCAACTATC+AGG + chr8_3:6377119-6377138 Msa1272610:intron 40.0%
TTCTAATGCTGCTGATAGGT+TGG + chr8_3:6377146-6377165 Msa1272610:intron 40.0%
!! GATTAGCCTTATGGTTGTCA+AGG + chr8_3:6377208-6377227 Msa1272610:intron 40.0%
CAAATCCTAACCATTGGATC+AGG + chr8_3:6377552-6377571 Msa1272610:intron 40.0%
AACCATGTTGGAAGGAAGAT+AGG - chr8_3:6377761-6377780 None:intergenic 40.0%
! CATCCAAGAAGTTTTTCTCC+AGG - chr8_3:6378012-6378031 None:intergenic 40.0%
GGAGAAAAACTTCTTGGATG+TGG + chr8_3:6378012-6378031 Msa1272610:CDS 40.0%
AACTACATACTCTGGATTCG+TGG - chr8_3:6378341-6378360 None:intergenic 40.0%
AGCAGTTGAGTGTATTCCAA+TGG + chr8_3:6378387-6378406 Msa1272610:CDS 40.0%
GCGAGTAATGATCCACATAT+TGG - chr8_3:6378829-6378848 None:intergenic 40.0%
! TGGGATGAGGCTCTTTTATA+GGG + chr8_3:6378896-6378915 Msa1272610:intron 40.0%
ACTTCGATACTCTCTCATCA+CGG + chr8_3:6379538-6379557 Msa1272610:intron 40.0%
CAATCTCATGCTGCATTTCT+GGG - chr8_3:6379588-6379607 None:intergenic 40.0%
TCAATCTCATGCTGCATTTC+TGG - chr8_3:6379589-6379608 None:intergenic 40.0%
TTCAGTGTTCAACTTCTGGT+AGG + chr8_3:6379637-6379656 Msa1272610:intron 40.0%
! TTGCTAGCCTAAGATGTGTA+GGG - chr8_3:6380013-6380032 None:intergenic 40.0%
! ATTGCTAGCCTAAGATGTGT+AGG - chr8_3:6380014-6380033 None:intergenic 40.0%
CTGCAGATTAAAGTTCCATG+TGG + chr8_3:6380879-6380898 Msa1272610:intron 40.0%
ACATTAGCATGCATTCACCA+TGG - chr8_3:6381000-6381019 None:intergenic 40.0%
CCAACAGAGACTAATTCCAA+TGG - chr8_3:6381085-6381104 None:intergenic 40.0%
! CCATTGGAATTAGTCTCTGT+TGG + chr8_3:6381082-6381101 Msa1272610:intron 40.0%
! AAAAGTAGCACCGGAAACAT+AGG + chr8_3:6381120-6381139 Msa1272610:intron 40.0%
ATTCCAACTGCCTATGTTTC+CGG - chr8_3:6381133-6381152 None:intergenic 40.0%
!!! TAAAATTTGTTTTGGGGGGG+GGG - chr8_3:6381239-6381258 None:intergenic 40.0%
! CCCCCCCAAAACAAATTTTA+TGG + chr8_3:6381239-6381258 Msa1272610:intron 40.0%
GAACGAATATCAGAGAGCAA+AGG - chr8_3:6381322-6381341 None:intergenic 40.0%
GAAAGAGAAACACACGGAGA+AGG - chr8_3:6373288-6373307 None:intergenic 45.0%
GCCAACGTTGTACTTGCTTT+CGG + chr8_3:6373347-6373366 Msa1272610:five_prime_UTR 45.0%
ACCGAAAGCAAGTACAACGT+TGG - chr8_3:6373351-6373370 None:intergenic 45.0%
AACTCATCCACGTGAACTTG+CGG - chr8_3:6373634-6373653 None:intergenic 45.0%
GGAGACTAATATGTAGAGCC+CGG + chr8_3:6373691-6373710 Msa1272610:intron 45.0%
TGTAGAGCCCGGATTCAAAT+AGG + chr8_3:6373702-6373721 Msa1272610:intron 45.0%
TTTGCCGCCTATTTGAATCC+GGG - chr8_3:6373712-6373731 None:intergenic 45.0%
GTTTGCCGCCTATTTGAATC+CGG - chr8_3:6373713-6373732 None:intergenic 45.0%
TCAACGAGGTCACTCATTGT+GGG - chr8_3:6373798-6373817 None:intergenic 45.0%
ATCAACGAGGTCACTCATTG+TGG - chr8_3:6373799-6373818 None:intergenic 45.0%
! CGTATGAGCTGATTCTTACC+AGG - chr8_3:6374132-6374151 None:intergenic 45.0%
CTCATACGGGAACCTTGATT+TGG + chr8_3:6374144-6374163 Msa1272610:five_prime_UTR 45.0%
AACGATGAGATTCAGGGTCA+AGG + chr8_3:6374313-6374332 Msa1272610:CDS 45.0%
GGTCAAGGCTCAGAATTTCT+AGG + chr8_3:6374328-6374347 Msa1272610:CDS 45.0%
! AAGGCTCAGAATTTCTAGGC+AGG + chr8_3:6374332-6374351 Msa1272610:CDS 45.0%
! AAGCAGCATCAAGCCTTGTA+AGG - chr8_3:6374459-6374478 None:intergenic 45.0%
TGATGCACTTAATCACGCTC+AGG + chr8_3:6374533-6374552 Msa1272610:CDS 45.0%
CCTTCGAGCAAGATCATTAG+CGG - chr8_3:6375069-6375088 None:intergenic 45.0%
GCAGCAACCAGAAATACATG+AGG - chr8_3:6375671-6375690 None:intergenic 45.0%
GTCATCTATGCTAGGATTGC+TGG + chr8_3:6375800-6375819 Msa1272610:CDS 45.0%
CTAGGATTGCTGGCAGAATA+TGG + chr8_3:6375810-6375829 Msa1272610:CDS 45.0%
TGCTGGCAGAATATGGTTTG+TGG + chr8_3:6375817-6375836 Msa1272610:CDS 45.0%
AGACAGGGTCCGAGAAAATA+AGG + chr8_3:6376210-6376229 Msa1272610:intron 45.0%
AACCATGCTGTTGAAAGTCC+GGG + chr8_3:6376830-6376849 Msa1272610:CDS 45.0%
GGAAACCCTTGACAACCATA+AGG - chr8_3:6377217-6377236 None:intergenic 45.0%
GACCTATCTTCCTTCCAACA+TGG + chr8_3:6377756-6377775 Msa1272610:CDS 45.0%
ATTGGCATGCAAGAGAGAAC+TGG + chr8_3:6377792-6377811 Msa1272610:CDS 45.0%
!! ACTGCTTCCTCTGTTTCTGA+GGG + chr8_3:6377876-6377895 Msa1272610:CDS 45.0%
CAAATCTTTCTAGATGGCCC+TGG + chr8_3:6377952-6377971 Msa1272610:intron 45.0%
AATTCCTGGGTTTGTGTCAG+TGG + chr8_3:6378146-6378165 Msa1272610:intron 45.0%
ATTCCTGGGTTTGTGTCAGT+GGG + chr8_3:6378147-6378166 Msa1272610:intron 45.0%
ACTAGGCAGTACATTGAAGG+TGG + chr8_3:6378190-6378209 Msa1272610:intron 45.0%
TCGGCTGTAACTACATACTC+TGG - chr8_3:6378349-6378368 None:intergenic 45.0%
! TGTAACAGTATGGCTGACTC+CGG + chr8_3:6378800-6378819 Msa1272610:intron 45.0%
TGACTCCGGTTACCAATATG+TGG + chr8_3:6378814-6378833 Msa1272610:intron 45.0%
ATATCCTAGCTAGTGGGATG+AGG + chr8_3:6378883-6378902 Msa1272610:intron 45.0%
! GTGGGATGAGGCTCTTTTAT+AGG + chr8_3:6378895-6378914 Msa1272610:intron 45.0%
GTGTGTGTGGGGTTTAGATA+TGG - chr8_3:6379263-6379282 None:intergenic 45.0%
!! TGAGAGAGTATCGAAGTCGA+AGG - chr8_3:6379535-6379554 None:intergenic 45.0%
! GATAAGTGGTACTGAAGCTG+CGG + chr8_3:6380591-6380610 Msa1272610:CDS 45.0%
AATTGTGACGAGAGACCACA+TGG - chr8_3:6380897-6380916 None:intergenic 45.0%
TTTGTGCTAACATGCTCGGA+TGG + chr8_3:6380915-6380934 Msa1272610:CDS 45.0%
!!! AAAATTTGTTTTGGGGGGGG+GGG - chr8_3:6381238-6381257 None:intergenic 45.0%
TCTCGCGTTCTGCAAAGAAA+CGG - chr8_3:6381461-6381480 None:intergenic 45.0%
!! TAATATTAATAACAAATATA+GGG - chr8_3:6377583-6377602 None:intergenic 5.0%
!! ATAATATTAATAACAAATAT+AGG - chr8_3:6377584-6377603 None:intergenic 5.0%
!!! AAAAATTCTTTTTTTTTTAA+TGG + chr8_3:6378256-6378275 Msa1272610:intron 5.0%
AGAGAAACACACGGAGAAGG+AGG - chr8_3:6373285-6373304 None:intergenic 50.0%
AGAGCCCGGATTCAAATAGG+CGG + chr8_3:6373705-6373724 Msa1272610:intron 50.0%
! GACATGGAATGGCTTGCACA+AGG - chr8_3:6374262-6374281 None:intergenic 50.0%
TCTGTTAAAAGCCCTTCGCG+CGG + chr8_3:6374283-6374302 Msa1272610:CDS 50.0%
CAATCTGTTCACGAAGGGAG+AGG - chr8_3:6374762-6374781 None:intergenic 50.0%
CCGCTAATGATCTTGCTCGA+AGG + chr8_3:6375066-6375085 Msa1272610:intron 50.0%
TAGGTCATTGCCTGCAAGCA+AGG - chr8_3:6375320-6375339 None:intergenic 50.0%
!! GAAGAGGCATTCATAACGCG+AGG - chr8_3:6375843-6375862 None:intergenic 50.0%
CATCCCGAAATGCATGAAGC+AGG - chr8_3:6376565-6376584 None:intergenic 50.0%
TGGCTGTCTTACTTTCTCCC+TGG + chr8_3:6376612-6376631 Msa1272610:intron 50.0%
AACCCGGACTTTCAACAGCA+TGG - chr8_3:6376835-6376854 None:intergenic 50.0%
TTTGTCGGATTTGCGGAACC+CGG - chr8_3:6376851-6376870 None:intergenic 50.0%
GTCTCGTCATGCTCATGTGA+AGG - chr8_3:6377858-6377877 None:intergenic 50.0%
!! GACTGCTTCCTCTGTTTCTG+AGG + chr8_3:6377875-6377894 Msa1272610:CDS 50.0%
ATCTGCGGTGATGCTATTCC+TGG + chr8_3:6377991-6378010 Msa1272610:CDS 50.0%
CAAAGAGAAGTTCGACGGAC+TGG - chr8_3:6378042-6378061 None:intergenic 50.0%
! TGGGTTTGTGTCAGTGGGTT+CGG + chr8_3:6378152-6378171 Msa1272610:intron 50.0%
GGCACTAGGCAGTACATTGA+AGG + chr8_3:6378187-6378206 Msa1272610:CDS 50.0%
TGACGGCCTTTATCGTCCAT+TGG - chr8_3:6378406-6378425 None:intergenic 50.0%
AATGGACGATAAAGGCCGTC+AGG + chr8_3:6378405-6378424 Msa1272610:CDS 50.0%
ACATGGTGTGTGTGTGTGTG+GGG - chr8_3:6379274-6379293 None:intergenic 50.0%
CACATGGTGTGTGTGTGTGT+GGG - chr8_3:6379275-6379294 None:intergenic 50.0%
TCACATGGTGTGTGTGTGTG+TGG - chr8_3:6379276-6379295 None:intergenic 50.0%
!! GAGAGTATCGAAGTCGAAGG+AGG - chr8_3:6379532-6379551 None:intergenic 50.0%
AGCTCCCAAAGAGATCGCAA+AGG + chr8_3:6380129-6380148 Msa1272610:intron 50.0%
CACGCCTTTGCGATCTCTTT+GGG - chr8_3:6380136-6380155 None:intergenic 50.0%
TCACGCCTTTGCGATCTCTT+TGG - chr8_3:6380137-6380156 None:intergenic 50.0%
TGCATCTGGAGAGGAATGCT+TGG - chr8_3:6380226-6380245 None:intergenic 50.0%
!! TCACTATTCTGGGGTGCATC+TGG - chr8_3:6380240-6380259 None:intergenic 50.0%
!!! AAATTTGTTTTGGGGGGGGG+GGG - chr8_3:6381237-6381256 None:intergenic 50.0%
TCGCGTTCTGCAAAGAAACG+GGG - chr8_3:6381459-6381478 None:intergenic 50.0%
CTCGCGTTCTGCAAAGAAAC+GGG - chr8_3:6381460-6381479 None:intergenic 50.0%
! CTTACTCTGGAAGAGTCGCA+TGG - chr8_3:6381498-6381517 None:intergenic 50.0%
CATGCGACTCTTCCAGAGTA+AGG + chr8_3:6381496-6381515 Msa1272610:CDS 50.0%
TCATCCACGTGAACTTGCGG+AGG - chr8_3:6373631-6373650 None:intergenic 55.0%
GTCACTCATTGTGGGACGGA+GGG - chr8_3:6373790-6373809 None:intergenic 55.0%
CGAGGTCACTCATTGTGGGA+CGG - chr8_3:6373794-6373813 None:intergenic 55.0%
CTGTTAAAAGCCCTTCGCGC+GGG + chr8_3:6374284-6374303 Msa1272610:CDS 55.0%
! CTTGATGCTGCTTGTGCTGC+AGG + chr8_3:6374466-6374485 Msa1272610:intron 55.0%
CGCTCAGGACCTAGACACTA+TGG + chr8_3:6374548-6374567 Msa1272610:CDS 55.0%
!! CCTGCAAGCAAGGCACTGTA+TGG - chr8_3:6375310-6375329 None:intergenic 55.0%
CCATACAGTGCCTTGCTTGC+AGG + chr8_3:6375307-6375326 Msa1272610:intron 55.0%
ATAGAGCCGCGGGCAAATAG+CGG + chr8_3:6375590-6375609 Msa1272610:intron 55.0%
! TGCGGCAGTCTCAGAAGTGT+TGG - chr8_3:6376395-6376414 None:intergenic 55.0%
CCTGCCCTGATCCAATGGTT+AGG - chr8_3:6377560-6377579 None:intergenic 55.0%
CCTAACCATTGGATCAGGGC+AGG + chr8_3:6377557-6377576 Msa1272610:intron 55.0%
TCTCTGCGCAAGTTCTTCCG+TGG - chr8_3:6377738-6377757 None:intergenic 55.0%
GAACCCACTGACACAAACCC+AGG - chr8_3:6378153-6378172 None:intergenic 55.0%
AGAGCCTCATCCCACTAGCT+AGG - chr8_3:6378890-6378909 None:intergenic 55.0%
TTTGTCAGGGGGAGCTAGTG+AGG + chr8_3:6379146-6379165 Msa1272610:intron 55.0%
!! ATTCTGGGGTGCATCTGGAG+AGG - chr8_3:6380235-6380254 None:intergenic 55.0%
CTCTAAGCACAGTGAACGCC+CGG + chr8_3:6380949-6380968 Msa1272610:CDS 55.0%
GCACCGGAAACATAGGCAGT+TGG + chr8_3:6381127-6381146 Msa1272610:intron 55.0%
! ACCAATTTGGGACCCCTTCC+CGG + chr8_3:6381171-6381190 Msa1272610:intron 55.0%
CTAAAGCTCCCGCATACGCA+AGG - chr8_3:6381198-6381217 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr8_3:6381203-6381222 Msa1272610:intron 55.0%
!!! AATTTGTTTTGGGGGGGGGG+GGG - chr8_3:6381236-6381255 None:intergenic 55.0%
GACTCCTCCGCAAGTTCACG+TGG + chr8_3:6373624-6373643 Msa1272610:intron 60.0%
GGTCACTCATTGTGGGACGG+AGG - chr8_3:6373791-6373810 None:intergenic 60.0%
CGTTGTTAAGCCCGCGCGAA+GGG - chr8_3:6374297-6374316 None:intergenic 60.0%
TCGTTGTTAAGCCCGCGCGA+AGG - chr8_3:6374298-6374317 None:intergenic 60.0%
ACGAGCAAGGGGGCAAGAAG+AGG + chr8_3:6374732-6374751 Msa1272610:CDS 60.0%
TAGGGCCTGCCCTGATCCAA+TGG - chr8_3:6377565-6377584 None:intergenic 60.0%
CGGGCGTTCACTGTGCTTAG+AGG - chr8_3:6380951-6380970 None:intergenic 60.0%
TCCGGGAAGGGGTCCCAAAT+TGG - chr8_3:6381175-6381194 None:intergenic 60.0%
CATACGCAAGGTCCGGGAAG+GGG - chr8_3:6381186-6381205 None:intergenic 60.0%
GCATACGCAAGGTCCGGGAA+GGG - chr8_3:6381187-6381206 None:intergenic 60.0%
CTTCCCGGACCTTGCGTATG+CGG + chr8_3:6381186-6381205 Msa1272610:intron 60.0%
TTCCCGGACCTTGCGTATGC+GGG + chr8_3:6381187-6381206 Msa1272610:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr8_3:6381204-6381223 Msa1272610:intron 60.0%
!!! ATTTGTTTTGGGGGGGGGGG+GGG - chr8_3:6381235-6381254 None:intergenic 60.0%
CGGCTTCCGCTATTTGCCCG+CGG - chr8_3:6375599-6375618 None:intergenic 65.0%
CGCATACGCAAGGTCCGGGA+AGG - chr8_3:6381188-6381207 None:intergenic 65.0%
CTCCCGCATACGCAAGGTCC+GGG - chr8_3:6381192-6381211 None:intergenic 65.0%
GCTCCCGCATACGCAAGGTC+CGG - chr8_3:6381193-6381212 None:intergenic 65.0%
!!! TTTGTTTTGGGGGGGGGGGG+GGG - chr8_3:6381234-6381253 None:intergenic 65.0%
!!! TTGTTTTGGGGGGGGGGGGG+GGG - chr8_3:6381233-6381252 None:intergenic 70.0%
! GGGGGGGGGGGGGGGCAGCC+CGG - chr8_3:6381225-6381244 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 6373182 6381649 6373182 ID=Msa1272610;Name=Msa1272610
chr8_3 mRNA 6373182 6381649 6373182 ID=Msa1272610-mRNA-1;Parent=Msa1272610;Name=Msa1272610-mRNA-1;_AED=0.21;_eAED=0.21;_QI=341|0.88|0.88|1|0.88|0.88|18|57|502
chr8_3 exon 6373182 6373368 6373182 ID=Msa1272610-mRNA-1:exon:2291;Parent=Msa1272610-mRNA-1
chr8_3 exon 6374123 6374353 6374123 ID=Msa1272610-mRNA-1:exon:2292;Parent=Msa1272610-mRNA-1
chr8_3 exon 6374488 6374569 6374488 ID=Msa1272610-mRNA-1:exon:2293;Parent=Msa1272610-mRNA-1
chr8_3 exon 6374721 6374798 6374721 ID=Msa1272610-mRNA-1:exon:2294;Parent=Msa1272610-mRNA-1
chr8_3 exon 6374877 6374936 6374877 ID=Msa1272610-mRNA-1:exon:2295;Parent=Msa1272610-mRNA-1
chr8_3 exon 6375771 6375881 6375771 ID=Msa1272610-mRNA-1:exon:2296;Parent=Msa1272610-mRNA-1
chr8_3 exon 6376342 6376383 6376342 ID=Msa1272610-mRNA-1:exon:2297;Parent=Msa1272610-mRNA-1
chr8_3 exon 6376779 6376892 6376779 ID=Msa1272610-mRNA-1:exon:2298;Parent=Msa1272610-mRNA-1
chr8_3 exon 6377006 6377107 6377006 ID=Msa1272610-mRNA-1:exon:2299;Parent=Msa1272610-mRNA-1
chr8_3 exon 6377744 6377897 6377744 ID=Msa1272610-mRNA-1:exon:2300;Parent=Msa1272610-mRNA-1
chr8_3 exon 6377965 6378071 6377965 ID=Msa1272610-mRNA-1:exon:2301;Parent=Msa1272610-mRNA-1
chr8_3 exon 6378166 6378208 6378166 ID=Msa1272610-mRNA-1:exon:2302;Parent=Msa1272610-mRNA-1
chr8_3 exon 6378335 6378426 6378335 ID=Msa1272610-mRNA-1:exon:2303;Parent=Msa1272610-mRNA-1
chr8_3 exon 6379154 6379202 6379154 ID=Msa1272610-mRNA-1:exon:2304;Parent=Msa1272610-mRNA-1
chr8_3 exon 6379584 6379654 6379584 ID=Msa1272610-mRNA-1:exon:2305;Parent=Msa1272610-mRNA-1
chr8_3 exon 6380526 6380645 6380526 ID=Msa1272610-mRNA-1:exon:2306;Parent=Msa1272610-mRNA-1
chr8_3 exon 6380885 6380970 6380885 ID=Msa1272610-mRNA-1:exon:2307;Parent=Msa1272610-mRNA-1
chr8_3 exon 6381472 6381649 6381472 ID=Msa1272610-mRNA-1:exon:2308;Parent=Msa1272610-mRNA-1
chr8_3 five_prime_UTR 6373182 6373368 6373182 ID=Msa1272610-mRNA-1:five_prime_utr;Parent=Msa1272610-mRNA-1
chr8_3 five_prime_UTR 6374123 6374276 6374123 ID=Msa1272610-mRNA-1:five_prime_utr;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6374277 6374353 6374277 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6374488 6374569 6374488 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6374721 6374798 6374721 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6374877 6374936 6374877 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6375771 6375881 6375771 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6376342 6376383 6376342 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6376779 6376892 6376779 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6377006 6377107 6377006 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6377744 6377897 6377744 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6377965 6378071 6377965 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6378166 6378208 6378166 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6378335 6378426 6378335 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6379154 6379202 6379154 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6379584 6379654 6379584 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6380526 6380645 6380526 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6380885 6380970 6380885 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 CDS 6381472 6381592 6381472 ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1
chr8_3 three_prime_UTR 6381593 6381649 6381593 ID=Msa1272610-mRNA-1:three_prime_utr;Parent=Msa1272610-mRNA-1
Gene Sequence

>Msa1272610

ATGTCTTCTGTTAAAAGCCCTTCGCGCGGGCTTAACAACGATGAGATTCAGGGTCAAGGCTCAGAATTTCTAGGCAGGCACAATCTTGAAAAACAACTGGCTCAAAGCAATTTCAAAAGCAATGATGCACTTAATCACGCTCAGGACCTAGACACTATGGAACTTTTTTCACGAGCAAGGGGGCAAGAAGAGGAGATCCTCTCCCTTCGTGAACAGATTGCTGTTTCTTGTATGAAGGAGTTGCAGCTAGTGAATGAGAAATGCAAACTAGAGAGGGAATTTTCGGAATTAAGAATGATTGCAGAGGACGAGCGATATATCTTCATGTCATCTATGCTAGGATTGCTGGCAGAATATGGTTTGTGGCCTCGCGTTATGAATGCCTCTTCAGTATCCAACTATGTAAAGCATTTACATGATCAAATACAATGGAGGATTCGAAATTCACATGATAGAATTGGAGAGTTAACTTCTGGGCAAGAAATTCATGCAGATAATGGTAACCATGCTGTTGAAAGTCCGGGTTCCGCAAATCCGACAAATCACATTCATAATGATTTCATGTTTCAGCATAACATTCCCCAGCAAAATCTTATTGGCAATGAACAAAATCACCAACCAATGAGCAATATGACAGGATATATGAACCCAGGTGTTAGTGGTGATAACTTGCGCAGAGACCTATCTTCCTTCCAACATGGTTTAATTGATCAAATTGGCATGCAAGAGAGAACTGGTGAAAGACAATTTTTAAATGGCAATATCAACTTGTATCAACCTTCACATGAGCATGACGAGACTGCTTCCTCTGTTTCTGAGGATGGCCCTGGCATTGAGAATTTTCAAATCTGCGGTGATGCTATTCCTGGAGAAAAACTTCTTGGATGTGGATATCCAGTCCGTCGAACTTCTCTTTGTATGTTTCAGTGGGTTCGGCATCTTCAGGATGGCACTAGGCAGTACATTGAAGGAGCCACGAATCCAGAGTATGTAGTTACAGCCGATGATGTCGATAAACTGATAGCAGTTGAGTGTATTCCAATGGACGATAAAGGCCGTCAGGGGGAGCTAGTGAGGCTTTTTGCTAATGACCAGCACAAAATAAAATGTGACCCAGAAATGCAGCATGAGATTGACACATATTTGTCTAAAGGAGAAGCAATCTTCAGTGTTCAACTTCTGATGGATTCTTCTGAAAATTGGGAACAAGCAACTCTATTCTTAAGACGATCAGGATACCAAATTAAGATAAGTGGTACTGAAGCTGCGGTAGTTTCTGAGAAATTCTCAAAGGACTTATCGATTAAAGTTCCATGTGGTCTCTCGTCACAATTTGTGCTAACATGCTCGGATGGATCTTCTCATCCTCTAAGCACAGTGAACGCCCGAACGCGAGACACACTTGTGTTAACCATGCGACTCTTCCAGAGTAAGGTAATTCTATCTTTTGCCAACAATTACTTGTATATCAGTGACAATGGCAAAATAATTGTAATCCTAATATTGTAG

Protein sequence

>Msa1272610

MSSVKSPSRGLNNDEIQGQGSEFLGRHNLEKQLAQSNFKSNDALNHAQDLDTMELFSRARGQEEEILSLREQIAVSCMKELQLVNEKCKLEREFSELRMIAEDERYIFMSSMLGLLAEYGLWPRVMNASSVSNYVKHLHDQIQWRIRNSHDRIGELTSGQEIHADNGNHAVESPGSANPTNHIHNDFMFQHNIPQQNLIGNEQNHQPMSNMTGYMNPGVSGDNLRRDLSSFQHGLIDQIGMQERTGERQFLNGNINLYQPSHEHDETASSVSEDGPGIENFQICGDAIPGEKLLGCGYPVRRTSLCMFQWVRHLQDGTRQYIEGATNPEYVVTADDVDKLIAVECIPMDDKGRQGELVRLFANDQHKIKCDPEMQHEIDTYLSKGEAIFSVQLLMDSSENWEQATLFLRRSGYQIKISGTEAAVVSEKFSKDLSIKVPCGLSSQFVLTCSDGSSHPLSTVNARTRDTLVLTMRLFQSKVILSFANNYLYISDNGKIIVILIL*