Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1272610 | XP_013444029.1 | 87.358 | 530 | 17 | 2 | 1 | 480 | 1 | 530 | 0.0 | 944 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1272610 | A0A072TLF7 | 87.358 | 530 | 17 | 2 | 1 | 480 | 1 | 530 | 0.0 | 944 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0008220 | Msa1272610 | 0.802918 | 4.466828e-49 | -8.615850e-47 |
Msa0043500 | Msa1272610 | 0.801119 | 1.046400e-48 | -8.615850e-47 |
Msa0092410 | Msa1272610 | 0.818677 | 1.729947e-52 | -8.615850e-47 |
Msa0615220 | Msa1272610 | 0.822421 | 2.389975e-53 | -8.615850e-47 |
Msa0626850 | Msa1272610 | 0.803125 | 4.046091e-49 | -8.615850e-47 |
Msa0708310 | Msa1272610 | 0.803234 | 3.842768e-49 | -8.615850e-47 |
Msa0715410 | Msa1272610 | 0.830463 | 2.895025e-55 | -8.615850e-47 |
Msa0749440 | Msa1272610 | 0.809059 | 2.281708e-50 | -8.615850e-47 |
Msa0809140 | Msa1272610 | 0.805431 | 1.339703e-49 | -8.615850e-47 |
Msa0826760 | Msa1272610 | 0.804910 | 1.721645e-49 | -8.615850e-47 |
Msa0828660 | Msa1272610 | 0.813527 | 2.446403e-51 | -8.615850e-47 |
Msa0187830 | Msa1272610 | 0.808972 | 2.381578e-50 | -8.615850e-47 |
Msa0189610 | Msa1272610 | 0.818070 | 2.374330e-52 | -8.615850e-47 |
Msa0215590 | Msa1272610 | 0.836805 | 7.546691e-57 | -8.615850e-47 |
Msa0225220 | Msa1272610 | 0.805619 | 1.223023e-49 | -8.615850e-47 |
Msa1272610 | Msa1310440 | 0.917099 | 8.018388e-86 | -8.615850e-47 |
Msa1272610 | Msa1371940 | 0.807643 | 4.572440e-50 | -8.615850e-47 |
Msa1272610 | Msa1418280 | 0.828432 | 9.021408e-55 | -8.615850e-47 |
Msa1272610 | Msa1424630 | 0.806420 | 8.297199e-50 | -8.615850e-47 |
Msa1272610 | Msa1430550 | 0.835738 | 1.409034e-56 | -8.615850e-47 |
Msa1272610 | Msa1435070 | 0.813539 | 2.432400e-51 | -8.615850e-47 |
Msa1272610 | Msa1439700 | 0.813094 | 3.045704e-51 | -8.615850e-47 |
Msa1272610 | Msa1446780 | 0.802222 | 6.213832e-49 | -8.615850e-47 |
Msa1272610 | Msa1457160 | 0.838831 | 2.276027e-57 | -8.615850e-47 |
Msa0389390 | Msa1272610 | 0.803845 | 2.869975e-49 | -8.615850e-47 |
Msa0402180 | Msa1272610 | 0.804696 | 1.908387e-49 | -8.615850e-47 |
Msa0482180 | Msa1272610 | 0.810129 | 1.343642e-50 | -8.615850e-47 |
Msa1038080 | Msa1272610 | 0.809725 | 1.641742e-50 | -8.615850e-47 |
Msa1082290 | Msa1272610 | 0.803229 | 3.851811e-49 | -8.615850e-47 |
Msa0255850 | Msa1272610 | 0.815447 | 9.203268e-52 | -8.615850e-47 |
Msa0261360 | Msa1272610 | 0.808891 | 2.478716e-50 | -8.615850e-47 |
Msa0269560 | Msa1272610 | 0.807561 | 4.759148e-50 | -8.615850e-47 |
Msa0308460 | Msa1272610 | 0.818595 | 1.805538e-52 | -8.615850e-47 |
Msa0333650 | Msa1272610 | 0.836471 | 9.179214e-57 | -8.615850e-47 |
Msa0340690 | Msa1272610 | 0.812317 | 4.505454e-51 | -8.615850e-47 |
Msa0340710 | Msa1272610 | 0.815733 | 7.948133e-52 | -8.615850e-47 |
Msa0342010 | Msa1272610 | 0.807584 | 4.706703e-50 | -8.615850e-47 |
Msa1182660 | Msa1272610 | 0.826865 | 2.145517e-54 | -8.615850e-47 |
Msa0483800 | Msa1272610 | 0.813682 | 2.261740e-51 | -8.615850e-47 |
Msa0506860 | Msa1272610 | 0.803878 | 2.824454e-49 | -8.615850e-47 |
Msa0521670 | Msa1272610 | 0.808910 | 2.455112e-50 | -8.615850e-47 |
Msa0530100 | Msa1272610 | 0.816797 | 4.595206e-52 | -8.615850e-47 |
Msa0532930 | Msa1272610 | 0.806851 | 6.730836e-50 | -8.615850e-47 |
Msa0597000 | Msa1272610 | 0.831716 | 1.425685e-55 | -8.615850e-47 |
Msa0865330 | Msa1272610 | 0.821695 | 3.521176e-53 | -8.615850e-47 |
Msa0870060 | Msa1272610 | 0.807824 | 4.185526e-50 | -8.615850e-47 |
Msa0901320 | Msa1272610 | 0.801248 | 9.849555e-49 | -8.615850e-47 |
Msa0973600 | Msa1272610 | 0.802211 | 6.247281e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1272610 | MtrunA17_Chr8g0337841 | 87.358 | 530 | 17 | 2 | 1 | 480 | 1 | 530 | 0.0 | 944 |
Msa1272610 | MtrunA17_Chr1g0188571 | 45.249 | 221 | 111 | 2 | 265 | 475 | 90 | 310 | 1.54e-61 | 204 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1272610 | AT3G03560.1 | 49.423 | 520 | 194 | 6 | 19 | 480 | 5 | 513 | 1.56e-166 | 481 |
Msa1272610 | AT5G23490.2 | 30.112 | 538 | 276 | 11 | 44 | 489 | 195 | 724 | 6.27e-66 | 226 |
Msa1272610 | AT5G23490.4 | 29.868 | 529 | 271 | 11 | 44 | 480 | 26 | 546 | 1.27e-65 | 222 |
Msa1272610 | AT5G23490.1 | 29.868 | 529 | 271 | 11 | 44 | 480 | 195 | 715 | 2.59e-64 | 222 |
Msa1272610 | AT5G08440.2 | 30.677 | 502 | 265 | 11 | 54 | 480 | 218 | 711 | 2.99e-64 | 222 |
Msa1272610 | AT5G08440.1 | 30.616 | 503 | 265 | 11 | 54 | 480 | 218 | 712 | 4.08e-64 | 221 |
Msa1272610 | AT5G08440.3 | 28.571 | 546 | 263 | 13 | 54 | 480 | 218 | 755 | 6.71e-57 | 202 |
Msa1272610 | AT5G23510.1 | 43.318 | 217 | 117 | 2 | 276 | 488 | 45 | 259 | 2.53e-55 | 186 |
Msa1272610 | AT5G23510.2 | 45.098 | 204 | 106 | 2 | 276 | 475 | 84 | 285 | 3.22e-54 | 185 |
Msa1272610 | AT5G23510.3 | 45.098 | 204 | 106 | 2 | 276 | 475 | 45 | 246 | 3.49e-54 | 183 |
Msa1272610 | AT5G23490.3 | 45.050 | 202 | 104 | 2 | 265 | 461 | 492 | 691 | 1.31e-51 | 187 |
Find 120 sgRNAs with CRISPR-Local
Find 487 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAATCTCATGCTGCATTTC+TGG | 0.038144 | 8_3:-6379586 | None:intergenic |
AACTTCTCTTTGTATGTTTC+AGG | 0.122947 | 8_3:+6378050 | Msa1272610:CDS |
CAGTACCACTTATCTTAATT+TGG | 0.128038 | 8_3:-6380582 | None:intergenic |
AGATGGATTCTTCTGAAAAT+TGG | 0.139385 | 8_3:+6380524 | Msa1272610:intron |
GACAAAATGCAGAAATTTAT+TGG | 0.148957 | 8_3:+6374193 | Msa1272610:five_prime_UTR |
CCTTGATTTGGAACAGAATA+AGG | 0.188024 | 8_3:+6374156 | Msa1272610:five_prime_UTR |
ATTCCCCAGCAAAATCTTAT+TGG | 0.213616 | 8_3:+6377018 | Msa1272610:CDS |
GAAGAGTCAAAGGAGAAATT+TGG | 0.229370 | 8_3:-6373199 | None:intergenic |
ATCAACCATGATTCAATTAC+AGG | 0.238399 | 8_3:+6374221 | Msa1272610:five_prime_UTR |
CATGGTTTAATTGATCAAAT+TGG | 0.263912 | 8_3:+6377774 | Msa1272610:CDS |
TAACTATCATCTACAATATT+AGG | 0.263941 | 8_3:-6381580 | None:intergenic |
GCTTAACAACGATGAGATTC+AGG | 0.273041 | 8_3:+6374306 | Msa1272610:CDS |
CTAGGATTGCTGGCAGAATA+TGG | 0.304704 | 8_3:+6375810 | Msa1272610:CDS |
CAATCTCATGCTGCATTTCT+GGG | 0.321836 | 8_3:-6379585 | None:intergenic |
AGAATTGGAGAGTTAACTTC+TGG | 0.339289 | 8_3:+6376782 | Msa1272610:CDS |
TCACATTCATAATGATTTCA+TGG | 0.339589 | 8_3:+6376871 | Msa1272610:CDS |
CTCATACGGGAACCTTGATT+TGG | 0.340899 | 8_3:+6374144 | Msa1272610:five_prime_UTR |
GTCATCTATGCTAGGATTGC+TGG | 0.343886 | 8_3:+6375800 | Msa1272610:CDS |
GCCAACGTTGTACTTGCTTT+CGG | 0.360826 | 8_3:+6373347 | Msa1272610:five_prime_UTR |
TGGGTTTGTGTCAGTGGGTT+CGG | 0.363363 | 8_3:+6378152 | Msa1272610:intron |
TCATTATGAATGTGATTTGT+CGG | 0.364696 | 8_3:-6376863 | None:intergenic |
TCAGTGGGTTCGGCATCTTC+AGG | 0.373194 | 8_3:+6378162 | Msa1272610:intron |
GATGGATTCTTCTGAAAATT+GGG | 0.373476 | 8_3:+6380525 | Msa1272610:intron |
TTCTTCTTGAAGCAATTTCC+TGG | 0.380075 | 8_3:+6374111 | Msa1272610:intron |
CCTTATTCTGTTCCAAATCA+AGG | 0.382934 | 8_3:-6374156 | None:intergenic |
GAAATTCTCAAAGGACTTAT+CGG | 0.383309 | 8_3:+6380624 | Msa1272610:CDS |
ATCTGCGGTGATGCTATTCC+TGG | 0.388358 | 8_3:+6377991 | Msa1272610:CDS |
GGTCAAGGCTCAGAATTTCT+AGG | 0.389100 | 8_3:+6374328 | Msa1272610:CDS |
CAAGAAATTCATGCAGATAA+TGG | 0.393619 | 8_3:+6376806 | Msa1272610:CDS |
CTTGATTTGGAACAGAATAA+GGG | 0.394830 | 8_3:+6374157 | Msa1272610:five_prime_UTR |
AATCTTCAGTGTTCAACTTC+TGG | 0.398745 | 8_3:+6379633 | Msa1272610:CDS |
TTGTTGTAATGTAATGTAAT+GGG | 0.410367 | 8_3:-6373243 | None:intergenic |
TGTATTCCAATGGACGATAA+AGG | 0.424243 | 8_3:+6378397 | Msa1272610:CDS |
TATCCTGTCATATTGCTCAT+TGG | 0.450061 | 8_3:-6377060 | None:intergenic |
AAATAAAGAAGAAGAGTCAA+AGG | 0.450126 | 8_3:-6373209 | None:intergenic |
TAACCATGCTGTTGAAAGTC+CGG | 0.453911 | 8_3:+6376829 | Msa1272610:CDS |
ATTGACACATATTTGTCTAA+AGG | 0.457743 | 8_3:+6379604 | Msa1272610:CDS |
GATTGCTGTTTCTTGTATGA+AGG | 0.459963 | 8_3:+6374777 | Msa1272610:CDS |
ACTCTATTCTTAAGACGATC+AGG | 0.466194 | 8_3:+6380556 | Msa1272610:CDS |
ATTTGAAAATTCTCAATGCC+AGG | 0.470912 | 8_3:-6377970 | None:intergenic |
CGCTCAGGACCTAGACACTA+TGG | 0.471026 | 8_3:+6374548 | Msa1272610:CDS |
AAGATAGAATTACCTTACTC+TGG | 0.474605 | 8_3:-6381508 | None:intergenic |
CTGGTAAGAATCAGCTCATA+CGG | 0.476287 | 8_3:+6374130 | Msa1272610:five_prime_UTR |
TGCTGGCAGAATATGGTTTG+TGG | 0.488103 | 8_3:+6375817 | Msa1272610:CDS |
GACTGCTTCCTCTGTTTCTG+AGG | 0.488642 | 8_3:+6377875 | Msa1272610:CDS |
TCGTTGTTAAGCCCGCGCGA+AGG | 0.490974 | 8_3:-6374295 | None:intergenic |
TATATGAACCCAGGTGTTAG+TGG | 0.491039 | 8_3:+6377081 | Msa1272610:CDS |
CAAAGAGAAGTTCGACGGAC+TGG | 0.491588 | 8_3:-6378039 | None:intergenic |
ATCAATTAAACCATGTTGGA+AGG | 0.491708 | 8_3:-6377766 | None:intergenic |
ACTGATATACAAGTAATTGT+TGG | 0.496787 | 8_3:-6381534 | None:intergenic |
AACAACCTGTAATTGAATCA+TGG | 0.502055 | 8_3:-6374226 | None:intergenic |
TTTGATCAATTAAACCATGT+TGG | 0.502162 | 8_3:-6377770 | None:intergenic |
ATTGGCATGCAAGAGAGAAC+TGG | 0.504735 | 8_3:+6377792 | Msa1272610:CDS |
CGTTGTTAAGCCCGCGCGAA+GGG | 0.508565 | 8_3:-6374294 | None:intergenic |
TTCAGTATCCAACTATGTAA+AGG | 0.509317 | 8_3:+6375860 | Msa1272610:CDS |
TGACGGCCTTTATCGTCCAT+TGG | 0.510180 | 8_3:-6378403 | None:intergenic |
CGTATGAGCTGATTCTTACC+AGG | 0.510595 | 8_3:-6374129 | None:intergenic |
GTTGTTGTAATGTAATGTAA+TGG | 0.511383 | 8_3:-6373244 | None:intergenic |
CTCTAAGCACAGTGAACGCC+CGG | 0.517034 | 8_3:+6380949 | Msa1272610:CDS |
AATGGACGATAAAGGCCGTC+AGG | 0.517378 | 8_3:+6378405 | Msa1272610:CDS |
CATGCGACTCTTCCAGAGTA+AGG | 0.517936 | 8_3:+6381496 | Msa1272610:CDS |
AACCATGTTGGAAGGAAGAT+AGG | 0.523000 | 8_3:-6377758 | None:intergenic |
GGCACTAGGCAGTACATTGA+AGG | 0.524560 | 8_3:+6378187 | Msa1272610:CDS |
GAATTGGAGAGTTAACTTCT+GGG | 0.530167 | 8_3:+6376783 | Msa1272610:CDS |
AACTACATACTCTGGATTCG+TGG | 0.536633 | 8_3:-6378338 | None:intergenic |
AACCATGCTGTTGAAAGTCC+GGG | 0.539042 | 8_3:+6376830 | Msa1272610:CDS |
GGATACCAAATTAAGATAAG+TGG | 0.543072 | 8_3:+6380577 | Msa1272610:CDS |
AGAGAAACACACGGAGAAGG+AGG | 0.549372 | 8_3:-6373282 | None:intergenic |
CAAATCTTTCTAGATGGCCC+TGG | 0.558170 | 8_3:+6377952 | Msa1272610:intron |
TTTACATCACCACTAACACC+TGG | 0.560197 | 8_3:-6377090 | None:intergenic |
CTGTCATATTGCTCATTGGT+TGG | 0.564575 | 8_3:-6377056 | None:intergenic |
CAATCTGTTCACGAAGGGAG+AGG | 0.565208 | 8_3:-6374759 | None:intergenic |
ACAATTTGTGCTAACATGCT+CGG | 0.566522 | 8_3:+6380911 | Msa1272610:CDS |
TCGGCTGTAACTACATACTC+TGG | 0.571630 | 8_3:-6378346 | None:intergenic |
TGAGAAATGCAAACTAGAGA+GGG | 0.576355 | 8_3:+6374894 | Msa1272610:CDS |
GGCATCTTCAGGATGGCACT+AGG | 0.576862 | 8_3:+6378173 | Msa1272610:CDS |
ATCTTCATGTCATCTATGCT+AGG | 0.577473 | 8_3:+6375792 | Msa1272610:CDS |
TACATAGTTGGATACTGAAG+AGG | 0.577579 | 8_3:-6375856 | None:intergenic |
TTTGTCGGATTTGCGGAACC+CGG | 0.579033 | 8_3:-6376848 | None:intergenic |
TGATGCACTTAATCACGCTC+AGG | 0.579821 | 8_3:+6374533 | Msa1272610:CDS |
GAAAGAGAAACACACGGAGA+AGG | 0.580914 | 8_3:-6373285 | None:intergenic |
AAGGCTCAGAATTTCTAGGC+AGG | 0.581505 | 8_3:+6374332 | Msa1272610:CDS |
CTTAACAACGATGAGATTCA+GGG | 0.582740 | 8_3:+6374307 | Msa1272610:CDS |
AGCAGTTGAGTGTATTCCAA+TGG | 0.584863 | 8_3:+6378387 | Msa1272610:CDS |
GTCTCGTCATGCTCATGTGA+AGG | 0.586436 | 8_3:-6377855 | None:intergenic |
AACGATGAGATTCAGGGTCA+AGG | 0.586447 | 8_3:+6374313 | Msa1272610:CDS |
GACCTATCTTCCTTCCAACA+TGG | 0.587812 | 8_3:+6377756 | Msa1272610:CDS |
AATGTGATTTGTCGGATTTG+CGG | 0.589636 | 8_3:-6376855 | None:intergenic |
TGGTAAGAATCAGCTCATAC+GGG | 0.591718 | 8_3:+6374131 | Msa1272610:five_prime_UTR |
AACCCGGACTTTCAACAGCA+TGG | 0.591961 | 8_3:-6376832 | None:intergenic |
TCTGTTAAAAGCCCTTCGCG+CGG | 0.592133 | 8_3:+6374283 | Msa1272610:CDS |
TTTGAAAATTCTCAATGCCA+GGG | 0.594336 | 8_3:-6377969 | None:intergenic |
TACTTGTATATCAGTGACAA+TGG | 0.596037 | 8_3:+6381542 | Msa1272610:CDS |
ACTGCTTCCTCTGTTTCTGA+GGG | 0.597603 | 8_3:+6377876 | Msa1272610:CDS |
ATGAGAAATGCAAACTAGAG+AGG | 0.598711 | 8_3:+6374893 | Msa1272610:CDS |
TTGATTTGGAACAGAATAAG+GGG | 0.605933 | 8_3:+6374158 | Msa1272610:five_prime_UTR |
AACAGCAATCTGTTCACGAA+GGG | 0.608091 | 8_3:-6374764 | None:intergenic |
TGGGTTCGGCATCTTCAGGA+TGG | 0.610087 | 8_3:+6378166 | Msa1272610:CDS |
TATCAGTTTATCGACATCAT+CGG | 0.613449 | 8_3:-6378365 | None:intergenic |
GACATGGAATGGCTTGCACA+AGG | 0.615410 | 8_3:-6374259 | None:intergenic |
GACCAGCACAAAATAAAATG+TGG | 0.616748 | 8_3:+6379181 | Msa1272610:CDS |
CAACCAATGAGCAATATGAC+AGG | 0.619492 | 8_3:+6377057 | Msa1272610:CDS |
ACATACAAAGAGAAGTTCGA+CGG | 0.621070 | 8_3:-6378044 | None:intergenic |
TACATGATCAAATACAATGG+AGG | 0.622516 | 8_3:+6376346 | Msa1272610:CDS |
AGTTTCTGAGAAATTCTCAA+AGG | 0.625438 | 8_3:+6380615 | Msa1272610:CDS |
TTTGTGCTAACATGCTCGGA+TGG | 0.632202 | 8_3:+6380915 | Msa1272610:CDS |
AATTGTGACGAGAGACCACA+TGG | 0.632894 | 8_3:-6380894 | None:intergenic |
ATCATTAATCTAGATTGCAG+AGG | 0.641867 | 8_3:+6375758 | Msa1272610:intron |
GATAAGTGGTACTGAAGCTG+CGG | 0.645103 | 8_3:+6380591 | Msa1272610:CDS |
TGTTGTAATGTAATGTAATG+GGG | 0.650815 | 8_3:-6373242 | None:intergenic |
CTTACTCTGGAAGAGTCGCA+TGG | 0.652953 | 8_3:-6381495 | None:intergenic |
TAAATTACCCTCAGAAACAG+AGG | 0.657268 | 8_3:-6377883 | None:intergenic |
ACCGAAAGCAAGTACAACGT+TGG | 0.658174 | 8_3:-6373348 | None:intergenic |
TTACATCACCACTAACACCT+GGG | 0.665988 | 8_3:-6377089 | None:intergenic |
GAAGAGGCATTCATAACGCG+AGG | 0.670089 | 8_3:-6375840 | None:intergenic |
ATGACAGGATATATGAACCC+AGG | 0.675735 | 8_3:+6377072 | Msa1272610:CDS |
AAACAGCAATCTGTTCACGA+AGG | 0.678830 | 8_3:-6374765 | None:intergenic |
ATTTACATGATCAAATACAA+TGG | 0.689823 | 8_3:+6376343 | Msa1272610:CDS |
AGGATCGAAAGAGAAACACA+CGG | 0.690557 | 8_3:-6373291 | None:intergenic |
CTGCAGATTAAAGTTCCATG+TGG | 0.704102 | 8_3:+6380879 | Msa1272610:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTGGTTTTATATTAATAATT+TGG | + | chr8_3:6373400-6373419 | Msa1272610:intron | 10.0% |
!!! | TTTAATTAAGAAATTTCTTT+TGG | + | chr8_3:6374048-6374067 | Msa1272610:intron | 10.0% |
!!! | AAAATATAATAGTGTTTTTT+AGG | + | chr8_3:6374575-6374594 | Msa1272610:intron | 10.0% |
!! | AAATAAATTTATAATCTGAA+TGG | - | chr8_3:6374697-6374716 | None:intergenic | 10.0% |
!!! | ATTCTTTTTTTTTTTTTTGA+CGG | - | chr8_3:6376589-6376608 | None:intergenic | 10.0% |
!! | AAAAAAAAAAAAAGAATTTC+TGG | + | chr8_3:6376592-6376611 | Msa1272610:intron | 10.0% |
!!! | ATAATTATTTTTTTAACACT+CGG | + | chr8_3:6380346-6380365 | Msa1272610:intron | 10.0% |
!! | ATTAAATAAATAACCAATTT+GGG | + | chr8_3:6381159-6381178 | Msa1272610:intron | 10.0% |
!!! | TCTAATTATGTTTTTTTGTT+TGG | + | chr8_3:6373381-6373400 | Msa1272610:intron | 15.0% |
!! | TGAATTATAAAAAAATAGTG+CGG | + | chr8_3:6373953-6373972 | Msa1272610:intron | 15.0% |
!! | ATTATCTCAAAAAAAATTCA+GGG | - | chr8_3:6374615-6374634 | None:intergenic | 15.0% |
!!! | ATTATGTTAAATTGATGTTT+TGG | + | chr8_3:6376050-6376069 | Msa1272610:intron | 15.0% |
!! | AGTCTATATTAGTATAATTA+GGG | - | chr8_3:6376109-6376128 | None:intergenic | 15.0% |
!! | AAGTCTATATTAGTATAATT+AGG | - | chr8_3:6376110-6376129 | None:intergenic | 15.0% |
!!! | TTTTAATCCTAACTAAATAA+GGG | + | chr8_3:6376128-6376147 | Msa1272610:intron | 15.0% |
!! | AATATCCAAAAATTATTTAG+AGG | - | chr8_3:6376295-6376314 | None:intergenic | 15.0% |
!! | TTAGTTTATGAATATTGTTA+AGG | + | chr8_3:6377652-6377671 | Msa1272610:intron | 15.0% |
!! | TAAGTACATATATTACAAAA+TGG | - | chr8_3:6377714-6377733 | None:intergenic | 15.0% |
!! | TAAATTAGTTATACATATCA+TGG | + | chr8_3:6378436-6378455 | Msa1272610:intron | 15.0% |
!! | TGTATACATTATATGAATTA+TGG | + | chr8_3:6378473-6378492 | Msa1272610:intron | 15.0% |
!!! | TTTATCAACAAACATTTTTT+TGG | - | chr8_3:6379236-6379255 | None:intergenic | 15.0% |
!!! | GTTTTTGTTAGTTTTTTTAT+CGG | + | chr8_3:6379938-6379957 | Msa1272610:intron | 15.0% |
!!! | TAAAAATTGTTATTCATAGT+TGG | + | chr8_3:6380100-6380119 | Msa1272610:intron | 15.0% |
!! | GAGTGTTAAAAAAATAATTA+TGG | - | chr8_3:6380347-6380366 | None:intergenic | 15.0% |
!! | ACAAAAAAACTTAAAATCTA+TGG | - | chr8_3:6380717-6380736 | None:intergenic | 15.0% |
!! | CATTAAATAAATAACCAATT+TGG | + | chr8_3:6381158-6381177 | Msa1272610:intron | 15.0% |
!! | ATTCAAACTTACATTTAAAA+TGG | - | chr8_3:6381398-6381417 | None:intergenic | 15.0% |
!! | TTGTTGTAATGTAATGTAAT+GGG | - | chr8_3:6373246-6373265 | None:intergenic | 20.0% |
!! | AAAAAAACATAATTAGAAGC+AGG | - | chr8_3:6373378-6373397 | None:intergenic | 20.0% |
!! | TATCACATAATTATTGGTAA+TGG | - | chr8_3:6373872-6373891 | None:intergenic | 20.0% |
!! | GATTAGTATCACATAATTAT+TGG | - | chr8_3:6373878-6373897 | None:intergenic | 20.0% |
!! | TTATCTCAAAAAAAATTCAG+GGG | - | chr8_3:6374614-6374633 | None:intergenic | 20.0% |
!! | CATTATCTCAAAAAAAATTC+AGG | - | chr8_3:6374616-6374635 | None:intergenic | 20.0% |
!! | CAGATTATAAATTTATTTCC+AGG | + | chr8_3:6374699-6374718 | Msa1272610:intron | 20.0% |
!! | ATTAAGTTATATCTACTTCA+AGG | + | chr8_3:6374818-6374837 | Msa1272610:intron | 20.0% |
!! | AGGTAATCAACTTAATTTAA+CGG | + | chr8_3:6374848-6374867 | Msa1272610:intron | 20.0% |
!!! | TTACATGCCATATTTTTATT+AGG | + | chr8_3:6375007-6375026 | Msa1272610:intron | 20.0% |
!! | TCAATTGCCTAATAAAAATA+TGG | - | chr8_3:6375017-6375036 | None:intergenic | 20.0% |
!! | GTGTATTGAAAAATAAGTTA+TGG | - | chr8_3:6375240-6375259 | None:intergenic | 20.0% |
!! | TATAAAAGAATGAAACTACT+AGG | - | chr8_3:6375339-6375358 | None:intergenic | 20.0% |
!!! | CTATTTTCTATTTTACAAAG+CGG | - | chr8_3:6375574-6375593 | None:intergenic | 20.0% |
!! | CCTAAAATTTAAACATGATA+CGG | - | chr8_3:6375986-6376005 | None:intergenic | 20.0% |
!!! | CATGTTTAAATTTTAGGTTT+AGG | + | chr8_3:6375989-6376008 | Msa1272610:intron | 20.0% |
!!! | CTTTTAATCCTAACTAAATA+AGG | + | chr8_3:6376127-6376146 | Msa1272610:intron | 20.0% |
!!! | AGAGATTTTATCTTACTTTT+AGG | - | chr8_3:6376166-6376185 | None:intergenic | 20.0% |
!! | AGAATCATGTATTATAGATT+AGG | - | chr8_3:6376269-6376288 | None:intergenic | 20.0% |
!! | ATTTACATGATCAAATACAA+TGG | + | chr8_3:6376343-6376362 | Msa1272610:CDS | 20.0% |
!! | TGATAAACACAAATAATATG+AGG | - | chr8_3:6376935-6376954 | None:intergenic | 20.0% |
!! | ATTGTAGTTATTAGTTGTTA+GGG | - | chr8_3:6377355-6377374 | None:intergenic | 20.0% |
!!! | TTCTTTTTTTTTTAATGGAG+TGG | + | chr8_3:6378261-6378280 | Msa1272610:intron | 20.0% |
!!! | TTTTTTAAGTACGTTTTTCT+TGG | + | chr8_3:6378307-6378326 | Msa1272610:intron | 20.0% |
!!! | TAATTTATTTTCAAACCTGA+CGG | - | chr8_3:6378423-6378442 | None:intergenic | 20.0% |
!!! | TAATTTTACCACTTGTATAA+TGG | + | chr8_3:6378596-6378615 | Msa1272610:intron | 20.0% |
!!! | TATCACTCAGATTTTTTTTT+TGG | + | chr8_3:6379109-6379128 | Msa1272610:intron | 20.0% |
!!! | AAAAATGTTTGTTGATAAAC+TGG | + | chr8_3:6379237-6379256 | Msa1272610:intron | 20.0% |
!! | AACTAATTTGAAGAAATTTC+TGG | - | chr8_3:6379363-6379382 | None:intergenic | 20.0% |
!! | AAGTGAAACATATAATACAT+TGG | + | chr8_3:6379766-6379785 | Msa1272610:intron | 20.0% |
!! | TTTACCAAATACATTGAAAA+AGG | + | chr8_3:6379798-6379817 | Msa1272610:intron | 20.0% |
!!! | CTTTTAGAAATGATATTGAA+CGG | - | chr8_3:6380436-6380455 | None:intergenic | 20.0% |
!!! | ATATCATTTCTAAAAGATAC+AGG | + | chr8_3:6380440-6380459 | Msa1272610:intron | 20.0% |
!! | AATGCAAATTAAGATGAATA+AGG | - | chr8_3:6380478-6380497 | None:intergenic | 20.0% |
!! | ATTTCTGTTGTAAAAGTTAT+AGG | + | chr8_3:6380659-6380678 | Msa1272610:intron | 20.0% |
!! | TGTTAGTCATGTATTTAAAA+TGG | - | chr8_3:6381427-6381446 | None:intergenic | 20.0% |
!! | TAACTATCATCTACAATATT+AGG | - | chr8_3:6381583-6381602 | None:intergenic | 20.0% |
!!! | AATAACTGCAATTCATTTTA+GGG | - | chr8_3:6381629-6381648 | None:intergenic | 20.0% |
! | AAATAAAGAAGAAGAGTCAA+AGG | - | chr8_3:6373212-6373231 | None:intergenic | 25.0% |
! | TGTTGTAATGTAATGTAATG+GGG | - | chr8_3:6373245-6373264 | None:intergenic | 25.0% |
! | GTTGTTGTAATGTAATGTAA+TGG | - | chr8_3:6373247-6373266 | None:intergenic | 25.0% |
!! | TTATAGAGTTCTTAACCTTT+TGG | + | chr8_3:6373508-6373527 | Msa1272610:intron | 25.0% |
! | TAACAATAACAACTTATCCA+AGG | - | chr8_3:6374075-6374094 | None:intergenic | 25.0% |
! | GACAAAATGCAGAAATTTAT+TGG | + | chr8_3:6374193-6374212 | Msa1272610:five_prime_UTR | 25.0% |
!!! | AATTACAGGTTGTTTTGAAT+AGG | + | chr8_3:6374235-6374254 | Msa1272610:five_prime_UTR | 25.0% |
!! | ATTTTATTACCATAGTGTCT+AGG | - | chr8_3:6374560-6374579 | None:intergenic | 25.0% |
!!! | TCAGCATTTTATTTCTACTA+CGG | + | chr8_3:6375157-6375176 | Msa1272610:intron | 25.0% |
!! | TTTTCATACCTTTACATAGT+TGG | - | chr8_3:6375871-6375890 | None:intergenic | 25.0% |
! | TGCTTGATAAATGATAAACA+GGG | + | chr8_3:6375896-6375915 | Msa1272610:intron | 25.0% |
!! | CCGTATCATGTTTAAATTTT+AGG | + | chr8_3:6375983-6376002 | Msa1272610:intron | 25.0% |
!!! | ATTTTAGGTTTAGGTAAAGA+AGG | + | chr8_3:6375998-6376017 | Msa1272610:intron | 25.0% |
!! | CTCTTCCTCTAAATAATTTT+TGG | + | chr8_3:6376287-6376306 | Msa1272610:intron | 25.0% |
!! | GGATATTCTAACATTTTGTA+TGG | + | chr8_3:6376308-6376327 | Msa1272610:intron | 25.0% |
! | ATAGAATGACACAAATTATG+CGG | - | chr8_3:6376413-6376432 | None:intergenic | 25.0% |
!! | ATCTCTCTGATTGAAATTTT+TGG | + | chr8_3:6376440-6376459 | Msa1272610:intron | 25.0% |
! | TAAGTCATTCTTGAAGTTAA+TGG | + | chr8_3:6376712-6376731 | Msa1272610:intron | 25.0% |
!!! | AAGATCAGTGATTACTTTTT+TGG | + | chr8_3:6376752-6376771 | Msa1272610:intron | 25.0% |
!! | TCATTATGAATGTGATTTGT+CGG | - | chr8_3:6376866-6376885 | None:intergenic | 25.0% |
! | TCACATTCATAATGATTTCA+TGG | + | chr8_3:6376871-6376890 | Msa1272610:CDS | 25.0% |
! | TTCATAATGATTTCATGGTA+TGG | + | chr8_3:6376876-6376895 | Msa1272610:intron | 25.0% |
! | GTTAGAGTATGTGTATAAAT+AGG | - | chr8_3:6377309-6377328 | None:intergenic | 25.0% |
!!! | AGGGAAGTTAGTTTTTTATT+TGG | - | chr8_3:6377336-6377355 | None:intergenic | 25.0% |
! | GATTGTAGTTATTAGTTGTT+AGG | - | chr8_3:6377356-6377375 | None:intergenic | 25.0% |
! | TGTTAGGATTACAGAATAAA+GGG | - | chr8_3:6377433-6377452 | None:intergenic | 25.0% |
! | ATGTTAGGATTACAGAATAA+AGG | - | chr8_3:6377434-6377453 | None:intergenic | 25.0% |
! | GTAATATATGTACTTATCCA+CGG | + | chr8_3:6377718-6377737 | Msa1272610:intron | 25.0% |
! | TTTGATCAATTAAACCATGT+TGG | - | chr8_3:6377773-6377792 | None:intergenic | 25.0% |
! | CATGGTTTAATTGATCAAAT+TGG | + | chr8_3:6377774-6377793 | Msa1272610:CDS | 25.0% |
!! | GGTGAAAGACAATTTTTAAA+TGG | + | chr8_3:6377813-6377832 | Msa1272610:CDS | 25.0% |
!! | ATTGAGAATTTTCAAATCTG+CGG | + | chr8_3:6377976-6377995 | Msa1272610:CDS | 25.0% |
! | GATGAAAAGTTAAATACCAA+TGG | - | chr8_3:6378087-6378106 | None:intergenic | 25.0% |
! | AGAAGAGAAGGAAATTAATA+TGG | - | chr8_3:6378109-6378128 | None:intergenic | 25.0% |
! | ACTGATATCATTATAATTCC+TGG | + | chr8_3:6378132-6378151 | Msa1272610:intron | 25.0% |
! | CTGATATCATTATAATTCCT+GGG | + | chr8_3:6378133-6378152 | Msa1272610:intron | 25.0% |
!! | AACCATGTGAATTTTTCTAA+AGG | + | chr8_3:6379422-6379441 | Msa1272610:intron | 25.0% |
! | ATTGACACATATTTGTCTAA+AGG | + | chr8_3:6379604-6379623 | Msa1272610:CDS | 25.0% |
! | CTCAGATCATGTTTAATATA+TGG | + | chr8_3:6379690-6379709 | Msa1272610:intron | 25.0% |
!!! | AACTCCTTTTTCAATGTATT+TGG | - | chr8_3:6379805-6379824 | None:intergenic | 25.0% |
! | TTTCCACAATTTCTGTTATT+AGG | + | chr8_3:6379971-6379990 | Msa1272610:intron | 25.0% |
!! | TGTATTTTGTTCACTATTCT+GGG | - | chr8_3:6380250-6380269 | None:intergenic | 25.0% |
! | GTACTATTAAACACATGAAA+TGG | + | chr8_3:6380296-6380315 | Msa1272610:intron | 25.0% |
! | AACACAGTAAATGTAATTAC+CGG | - | chr8_3:6380971-6380990 | None:intergenic | 25.0% |
!! | TTTTATCTTAAAAGTAGCAC+CGG | + | chr8_3:6381111-6381130 | Msa1272610:intron | 25.0% |
!!! | TGCACCATAAAATTTGTTTT+GGG | - | chr8_3:6381246-6381265 | None:intergenic | 25.0% |
!!! | ATGCACCATAAAATTTGTTT+TGG | - | chr8_3:6381247-6381266 | None:intergenic | 25.0% |
! | ACTGATATACAAGTAATTGT+TGG | - | chr8_3:6381537-6381556 | None:intergenic | 25.0% |
!! | CAATAACTGCAATTCATTTT+AGG | - | chr8_3:6381630-6381649 | None:intergenic | 25.0% |
!!! | TTTTGTTGTTCTGTGATTCA+TGG | + | chr8_3:6373434-6373453 | Msa1272610:intron | 30.0% |
!! | TTTGTTGTTCTGTGATTCAT+GGG | + | chr8_3:6373435-6373454 | Msa1272610:intron | 30.0% |
!!! | AGTTCTTAACCTTTTGGAAT+TGG | + | chr8_3:6373514-6373533 | Msa1272610:intron | 30.0% |
!!! | AACCTTTTGGAATTGGAATA+AGG | + | chr8_3:6373521-6373540 | Msa1272610:intron | 30.0% |
TCAGAATTGTGTATTTAGTG+TGG | + | chr8_3:6373583-6373602 | Msa1272610:intron | 30.0% | |
CACAACATGTTAAAACTCTT+AGG | - | chr8_3:6373740-6373759 | None:intergenic | 30.0% | |
!! | CTAAGAGTTTTAACATGTTG+TGG | + | chr8_3:6373738-6373757 | Msa1272610:intron | 30.0% |
!! | GATTTTGAGTGTATTGTGTA+CGG | - | chr8_3:6373989-6374008 | None:intergenic | 30.0% |
ACAATACACTCAAAATCTCA+GGG | + | chr8_3:6373992-6374011 | Msa1272610:intron | 30.0% | |
! | AAGAAATTTCTTTTGGTCCT+TGG | + | chr8_3:6374055-6374074 | Msa1272610:intron | 30.0% |
! | AGTTGTTATTGTTAACTCCT+TGG | + | chr8_3:6374081-6374100 | Msa1272610:intron | 30.0% |
!! | CTTGATTTGGAACAGAATAA+GGG | + | chr8_3:6374157-6374176 | Msa1272610:five_prime_UTR | 30.0% |
!! | TTGATTTGGAACAGAATAAG+GGG | + | chr8_3:6374158-6374177 | Msa1272610:five_prime_UTR | 30.0% |
ATCAACCATGATTCAATTAC+AGG | + | chr8_3:6374221-6374240 | Msa1272610:five_prime_UTR | 30.0% | |
AACAACCTGTAATTGAATCA+TGG | - | chr8_3:6374229-6374248 | None:intergenic | 30.0% | |
! | TTTTAACAGAAGACATGGAA+TGG | - | chr8_3:6374273-6374292 | None:intergenic | 30.0% |
!!! | GATGTTTTTTGCATCTTCTA+AGG | - | chr8_3:6374667-6374686 | None:intergenic | 30.0% |
! | ATCTACTTCAAGGACATTTT+AGG | + | chr8_3:6374828-6374847 | Msa1272610:intron | 30.0% |
! | GGAATTTTCGGAATTAAGAA+TGG | + | chr8_3:6374915-6374934 | Msa1272610:CDS | 30.0% |
TAGACTCACTTTCAAATCAT+GGG | - | chr8_3:6375123-6375142 | None:intergenic | 30.0% | |
!!! | CAGCATTTTATTTCTACTAC+GGG | + | chr8_3:6375158-6375177 | Msa1272610:intron | 30.0% |
TGACGAGTAACTAAAGAAAT+TGG | - | chr8_3:6375199-6375218 | None:intergenic | 30.0% | |
TAAACTGATCTATTTCGACA+AGG | + | chr8_3:6375361-6375380 | Msa1272610:intron | 30.0% | |
TAAAATAGAAAATAGAGCCG+CGG | + | chr8_3:6375579-6375598 | Msa1272610:intron | 30.0% | |
!! | ATTTTAATGAATGCGCTATG+CGG | - | chr8_3:6375619-6375638 | None:intergenic | 30.0% |
ATCATTAATCTAGATTGCAG+AGG | + | chr8_3:6375758-6375777 | Msa1272610:intron | 30.0% | |
TTCAGTATCCAACTATGTAA+AGG | + | chr8_3:6375860-6375879 | Msa1272610:CDS | 30.0% | |
GTGCTTGATAAATGATAAAC+AGG | + | chr8_3:6375895-6375914 | Msa1272610:intron | 30.0% | |
! | GGCTTTTATTGAGATTTTGA+TGG | + | chr8_3:6375917-6375936 | Msa1272610:intron | 30.0% |
TTTAGGTAAAGAAGGAGAAA+AGG | + | chr8_3:6376006-6376025 | Msa1272610:intron | 30.0% | |
! | ATTTGCACCCTTATTTAGTT+AGG | - | chr8_3:6376138-6376157 | None:intergenic | 30.0% |
AAATCTCTTAGAATGAGACT+TGG | + | chr8_3:6376178-6376197 | Msa1272610:intron | 30.0% | |
!!! | CTTGTGTTACCTTATTTTCT+CGG | - | chr8_3:6376222-6376241 | None:intergenic | 30.0% |
GTATTTGATCATGTAAATGC+TGG | - | chr8_3:6376341-6376360 | None:intergenic | 30.0% | |
TACATGATCAAATACAATGG+AGG | + | chr8_3:6376346-6376365 | Msa1272610:CDS | 30.0% | |
!!! | TTTTTTGGACAGGATAGAAT+TGG | + | chr8_3:6376767-6376786 | Msa1272610:intron | 30.0% |
CAAGAAATTCATGCAGATAA+TGG | + | chr8_3:6376806-6376825 | Msa1272610:CDS | 30.0% | |
! | ATTGCCAATAAGATTTTGCT+GGG | - | chr8_3:6377025-6377044 | None:intergenic | 30.0% |
! | TAACTTTTGTCGAGACATTA+TGG | - | chr8_3:6377184-6377203 | None:intergenic | 30.0% |
ATGTCTCGACAAAAGTTAAA+TGG | + | chr8_3:6377186-6377205 | Msa1272610:intron | 30.0% | |
!! | AGTTAAATGGATTAGCCTTA+TGG | + | chr8_3:6377199-6377218 | Msa1272610:intron | 30.0% |
! | AGAGTATTCTCTATTGTGAA+GGG | - | chr8_3:6377239-6377258 | None:intergenic | 30.0% |
! | TAGAGTATTCTCTATTGTGA+AGG | - | chr8_3:6377240-6377259 | None:intergenic | 30.0% |
GTTAGGAGTTTATCTTTAAG+AGG | + | chr8_3:6377503-6377522 | Msa1272610:intron | 30.0% | |
ATCAATTAAACCATGTTGGA+AGG | - | chr8_3:6377769-6377788 | None:intergenic | 30.0% | |
ACAAGTCAAATCTTTCTAGA+TGG | + | chr8_3:6377946-6377965 | Msa1272610:intron | 30.0% | |
TTTGAAAATTCTCAATGCCA+GGG | - | chr8_3:6377972-6377991 | None:intergenic | 30.0% | |
ATTTGAAAATTCTCAATGCC+AGG | - | chr8_3:6377973-6377992 | None:intergenic | 30.0% | |
AACTTCTCTTTGTATGTTTC+AGG | + | chr8_3:6378050-6378069 | Msa1272610:CDS | 30.0% | |
TCAGGTAAAATTCTTTCCAT+TGG | + | chr8_3:6378068-6378087 | Msa1272610:intron | 30.0% | |
GATATCAGTAATAGAAGAGA+AGG | - | chr8_3:6378121-6378140 | None:intergenic | 30.0% | |
TATCAGTTTATCGACATCAT+CGG | - | chr8_3:6378368-6378387 | None:intergenic | 30.0% | |
ATGAATTATGGCTCAATCTA+TGG | + | chr8_3:6378485-6378504 | Msa1272610:intron | 30.0% | |
TCTGACAACATAATAGAACT+CGG | + | chr8_3:6378628-6378647 | Msa1272610:intron | 30.0% | |
AGAAAGTGAAGTTAAAAGTG+AGG | + | chr8_3:6378678-6378697 | Msa1272610:intron | 30.0% | |
AGTTCAGAAGCTAGTTAATT+AGG | - | chr8_3:6378770-6378789 | None:intergenic | 30.0% | |
AACCAATAGTTGTAACAGTA+TGG | + | chr8_3:6378790-6378809 | Msa1272610:intron | 30.0% | |
AGGGCTGCAAAATTTAAATA+TGG | + | chr8_3:6378915-6378934 | Msa1272610:intron | 30.0% | |
! | CTGTGCTAAAGTATTAATGA+AGG | + | chr8_3:6378964-6378983 | Msa1272610:intron | 30.0% |
ATAAATGAGAAGGCAATATG+AGG | - | chr8_3:6379052-6379071 | None:intergenic | 30.0% | |
GCATATAACGATAAATGAGA+AGG | - | chr8_3:6379062-6379081 | None:intergenic | 30.0% | |
GTGATATTCTTATGATGTCT+AGG | - | chr8_3:6379095-6379114 | None:intergenic | 30.0% | |
!!! | TACCACATTTTATTTTGTGC+TGG | - | chr8_3:6379186-6379205 | None:intergenic | 30.0% |
! | TGCCTTTAGAAAAATTCACA+TGG | - | chr8_3:6379427-6379446 | None:intergenic | 30.0% |
CATTTATGCTTGAACAACTT+AGG | + | chr8_3:6379445-6379464 | Msa1272610:intron | 30.0% | |
AACATGATCTGAGAACTAAA+AGG | - | chr8_3:6379683-6379702 | None:intergenic | 30.0% | |
TGTCCTAATAACAGAAATTG+TGG | - | chr8_3:6379977-6379996 | None:intergenic | 30.0% | |
ACAATTTCTGTTATTAGGAC+AGG | + | chr8_3:6379976-6379995 | Msa1272610:intron | 30.0% | |
GTATACATATCTACATTGCA+TGG | - | chr8_3:6380060-6380079 | None:intergenic | 30.0% | |
ATGTATACTTTGATGCATGA+AGG | + | chr8_3:6380072-6380091 | Msa1272610:intron | 30.0% | |
GAAACTTTGTGTAAGAAGAT+TGG | - | chr8_3:6380179-6380198 | None:intergenic | 30.0% | |
! | GTATTTTGTTCACTATTCTG+GGG | - | chr8_3:6380249-6380268 | None:intergenic | 30.0% |
! | CTGTATTTTGTTCACTATTC+TGG | - | chr8_3:6380251-6380270 | None:intergenic | 30.0% |
AAAAGTGAATAGAACAAACG+AGG | - | chr8_3:6380402-6380421 | None:intergenic | 30.0% | |
! | AGATGGATTCTTCTGAAAAT+TGG | + | chr8_3:6380524-6380543 | Msa1272610:intron | 30.0% |
! | GATGGATTCTTCTGAAAATT+GGG | + | chr8_3:6380525-6380544 | Msa1272610:intron | 30.0% |
GGATACCAAATTAAGATAAG+TGG | + | chr8_3:6380577-6380596 | Msa1272610:CDS | 30.0% | |
CAGTACCACTTATCTTAATT+TGG | - | chr8_3:6380585-6380604 | None:intergenic | 30.0% | |
! | AGTTTCTGAGAAATTCTCAA+AGG | + | chr8_3:6380615-6380634 | Msa1272610:CDS | 30.0% |
GAAATTCTCAAAGGACTTAT+CGG | + | chr8_3:6380624-6380643 | Msa1272610:CDS | 30.0% | |
AAAAGTTATAGGCAATACCT+TGG | + | chr8_3:6380670-6380689 | Msa1272610:intron | 30.0% | |
AAAGTTATAGGCAATACCTT+GGG | + | chr8_3:6380671-6380690 | Msa1272610:intron | 30.0% | |
AGATAATCCATAAAAGGAGA+TGG | - | chr8_3:6380861-6380880 | None:intergenic | 30.0% | |
ATCTGCAGATAATCCATAAA+AGG | - | chr8_3:6380867-6380886 | None:intergenic | 30.0% | |
ACACAGTAAATGTAATTACC+GGG | - | chr8_3:6380970-6380989 | None:intergenic | 30.0% | |
!!! | TGTTTTAATCCACATACCAT+TGG | + | chr8_3:6381066-6381085 | Msa1272610:intron | 30.0% |
!!! | ACCATAAAATTTGTTTTGGG+GGG | - | chr8_3:6381243-6381262 | None:intergenic | 30.0% |
!!! | CACCATAAAATTTGTTTTGG+GGG | - | chr8_3:6381244-6381263 | None:intergenic | 30.0% |
!!! | GCACCATAAAATTTGTTTTG+GGG | - | chr8_3:6381245-6381264 | None:intergenic | 30.0% |
AAGATAGAATTACCTTACTC+TGG | - | chr8_3:6381511-6381530 | None:intergenic | 30.0% | |
TACTTGTATATCAGTGACAA+TGG | + | chr8_3:6381542-6381561 | Msa1272610:CDS | 30.0% | |
GAAGAGTCAAAGGAGAAATT+TGG | - | chr8_3:6373202-6373221 | None:intergenic | 35.0% | |
TGTTGGGTCAAAAAAGAAAC+AGG | - | chr8_3:6373314-6373333 | None:intergenic | 35.0% | |
!!! | GTTTCTTTTTTGACCCAACA+AGG | + | chr8_3:6373314-6373333 | Msa1272610:five_prime_UTR | 35.0% |
GGCAAAAAAAACACCTTGTT+GGG | - | chr8_3:6373330-6373349 | None:intergenic | 35.0% | |
TGGCAAAAAAAACACCTTGT+TGG | - | chr8_3:6373331-6373350 | None:intergenic | 35.0% | |
CACCTTATTCCAATTCCAAA+AGG | - | chr8_3:6373526-6373545 | None:intergenic | 35.0% | |
GTGTATTTAGTGTGGTGAAA+TGG | + | chr8_3:6373591-6373610 | Msa1272610:intron | 35.0% | |
CATATGTGATACAATCAACG+AGG | - | chr8_3:6373812-6373831 | None:intergenic | 35.0% | |
CACAATACACTCAAAATCTC+AGG | + | chr8_3:6373991-6374010 | Msa1272610:intron | 35.0% | |
TCAAGAAGAAACAGATACCA+AGG | - | chr8_3:6374101-6374120 | None:intergenic | 35.0% | |
TTCTTCTTGAAGCAATTTCC+TGG | + | chr8_3:6374111-6374130 | Msa1272610:intron | 35.0% | |
CCTTATTCTGTTCCAAATCA+AGG | - | chr8_3:6374159-6374178 | None:intergenic | 35.0% | |
!! | CCTTGATTTGGAACAGAATA+AGG | + | chr8_3:6374156-6374175 | Msa1272610:five_prime_UTR | 35.0% |
CTTAACAACGATGAGATTCA+GGG | + | chr8_3:6374307-6374326 | Msa1272610:CDS | 35.0% | |
!!! | TAACTGTTGCCTTGGTTTTA+TGG | + | chr8_3:6374393-6374412 | Msa1272610:intron | 35.0% |
CATTCCAATCCATAAAACCA+AGG | - | chr8_3:6374405-6374424 | None:intergenic | 35.0% | |
GCACAATCTTGAAAAACAAC+TGG | + | chr8_3:6374488-6374507 | Msa1272610:CDS | 35.0% | |
!! | GATTGCTGTTTCTTGTATGA+AGG | + | chr8_3:6374777-6374796 | Msa1272610:CDS | 35.0% |
CAACTTAATTTAACGGTTGC+AGG | + | chr8_3:6374855-6374874 | Msa1272610:intron | 35.0% | |
ATGAGAAATGCAAACTAGAG+AGG | + | chr8_3:6374893-6374912 | Msa1272610:CDS | 35.0% | |
TGAGAAATGCAAACTAGAGA+GGG | + | chr8_3:6374894-6374913 | Msa1272610:CDS | 35.0% | |
! | CAAACTAGAGAGGGAATTTT+CGG | + | chr8_3:6374903-6374922 | Msa1272610:CDS | 35.0% |
AGCACAACTTACAAAAGACA+TGG | - | chr8_3:6374946-6374965 | None:intergenic | 35.0% | |
CTAGACTCACTTTCAAATCA+TGG | - | chr8_3:6375124-6375143 | None:intergenic | 35.0% | |
TCGTCATTCATGATGATATG+AGG | + | chr8_3:6375213-6375232 | Msa1272610:intron | 35.0% | |
CAATACGCTAATGATAACAC+TGG | - | chr8_3:6375526-6375545 | None:intergenic | 35.0% | |
GTGTTATCATTAGCGTATTG+TGG | + | chr8_3:6375526-6375545 | Msa1272610:intron | 35.0% | |
AAAATAGAAAATAGAGCCGC+GGG | + | chr8_3:6375580-6375599 | Msa1272610:intron | 35.0% | |
CACACAACATATACAGATAG+TGG | - | chr8_3:6375642-6375661 | None:intergenic | 35.0% | |
CACTATCTGTATATGTTGTG+TGG | + | chr8_3:6375640-6375659 | Msa1272610:intron | 35.0% | |
ATCTTCATGTCATCTATGCT+AGG | + | chr8_3:6375792-6375811 | Msa1272610:CDS | 35.0% | |
TACATAGTTGGATACTGAAG+AGG | - | chr8_3:6375859-6375878 | None:intergenic | 35.0% | |
TGCACACACACATCAAATTA+AGG | + | chr8_3:6375952-6375971 | Msa1272610:intron | 35.0% | |
TGTGATACAACGTACTAACT+CGG | + | chr8_3:6376080-6376099 | Msa1272610:intron | 35.0% | |
ACTTGGTTACTAACAAGACA+GGG | + | chr8_3:6376195-6376214 | Msa1272610:intron | 35.0% | |
ATCATGTTAAGAAGCTACCA+GGG | - | chr8_3:6376632-6376651 | None:intergenic | 35.0% | |
AATCATGTTAAGAAGCTACC+AGG | - | chr8_3:6376633-6376652 | None:intergenic | 35.0% | |
!!! | CAGTGATTACTTTTTTGGAC+AGG | + | chr8_3:6376757-6376776 | Msa1272610:intron | 35.0% |
AGAATTGGAGAGTTAACTTC+TGG | + | chr8_3:6376782-6376801 | Msa1272610:CDS | 35.0% | |
GAATTGGAGAGTTAACTTCT+GGG | + | chr8_3:6376783-6376802 | Msa1272610:CDS | 35.0% | |
! | AATGTGATTTGTCGGATTTG+CGG | - | chr8_3:6376858-6376877 | None:intergenic | 35.0% |
ATTTCATGGTATGGTACTGT+TGG | + | chr8_3:6376885-6376904 | Msa1272610:intron | 35.0% | |
ATTCCCCAGCAAAATCTTAT+TGG | + | chr8_3:6377018-6377037 | Msa1272610:CDS | 35.0% | |
! | TTGCCAATAAGATTTTGCTG+GGG | - | chr8_3:6377024-6377043 | None:intergenic | 35.0% |
! | CATTGCCAATAAGATTTTGC+TGG | - | chr8_3:6377026-6377045 | None:intergenic | 35.0% |
TATCCTGTCATATTGCTCAT+TGG | - | chr8_3:6377063-6377082 | None:intergenic | 35.0% | |
AGATTTCTAATGCTGCTGAT+AGG | + | chr8_3:6377142-6377161 | Msa1272610:intron | 35.0% | |
!! | ATTAGCCTTATGGTTGTCAA+GGG | + | chr8_3:6377209-6377228 | Msa1272610:intron | 35.0% |
GAGTATTCTCTATTGTGAAG+GGG | - | chr8_3:6377238-6377257 | None:intergenic | 35.0% | |
CGACTCACAGTTATTATGTT+AGG | - | chr8_3:6377449-6377468 | None:intergenic | 35.0% | |
GAGAGAGTTGTGTAAAAGTT+AGG | + | chr8_3:6377486-6377505 | Msa1272610:intron | 35.0% | |
GAAGAACAAATCCTAACCAT+TGG | + | chr8_3:6377546-6377565 | Msa1272610:intron | 35.0% | |
AAATCCTAACCATTGGATCA+GGG | + | chr8_3:6377553-6377572 | Msa1272610:intron | 35.0% | |
TAAATTACCCTCAGAAACAG+AGG | - | chr8_3:6377886-6377905 | None:intergenic | 35.0% | |
ATTCCTGGAGAAAAACTTCT+TGG | + | chr8_3:6378006-6378025 | Msa1272610:CDS | 35.0% | |
ACATACAAAGAGAAGTTCGA+CGG | - | chr8_3:6378047-6378066 | None:intergenic | 35.0% | |
! | AAGTACGTTTTTCTTGGATC+AGG | + | chr8_3:6378313-6378332 | Msa1272610:intron | 35.0% |
TGTATTCCAATGGACGATAA+AGG | + | chr8_3:6378397-6378416 | Msa1272610:CDS | 35.0% | |
CTGAGTAACCATTATACAAG+TGG | - | chr8_3:6378607-6378626 | None:intergenic | 35.0% | |
AGCCATACTGTTACAACTAT+TGG | - | chr8_3:6378795-6378814 | None:intergenic | 35.0% | |
! | ATGATCCACATATTGGTAAC+CGG | - | chr8_3:6378822-6378841 | None:intergenic | 35.0% |
ACTCGCTCAAATTGCATAAA+CGG | + | chr8_3:6378843-6378862 | Msa1272610:intron | 35.0% | |
TTATGCAATATCCTAGCTAG+TGG | + | chr8_3:6378876-6378895 | Msa1272610:intron | 35.0% | |
TATGCAATATCCTAGCTAGT+GGG | + | chr8_3:6378877-6378896 | Msa1272610:intron | 35.0% | |
! | ATGATGTCTAGGACAGAAAT+TGG | - | chr8_3:6379084-6379103 | None:intergenic | 35.0% |
TCGATTCTGTTATCTTTGTC+AGG | + | chr8_3:6379132-6379151 | Msa1272610:intron | 35.0% | |
CGATTCTGTTATCTTTGTCA+GGG | + | chr8_3:6379133-6379152 | Msa1272610:intron | 35.0% | |
GATTCTGTTATCTTTGTCAG+GGG | + | chr8_3:6379134-6379153 | Msa1272610:intron | 35.0% | |
ATTCTGTTATCTTTGTCAGG+GGG | + | chr8_3:6379135-6379154 | Msa1272610:intron | 35.0% | |
GACCAGCACAAAATAAAATG+TGG | + | chr8_3:6379181-6379200 | Msa1272610:CDS | 35.0% | |
!! | CACACACTCTAAAATTCACA+TGG | - | chr8_3:6379291-6379310 | None:intergenic | 35.0% |
CATGACATGTTAGACTTACA+CGG | + | chr8_3:6379392-6379411 | Msa1272610:intron | 35.0% | |
ATGACATGTTAGACTTACAC+GGG | + | chr8_3:6379393-6379412 | Msa1272610:intron | 35.0% | |
! | CATTTCTGGGTCTATAAAGT+TGG | - | chr8_3:6379575-6379594 | None:intergenic | 35.0% |
AATCTTCAGTGTTCAACTTC+TGG | + | chr8_3:6379633-6379652 | Msa1272610:CDS | 35.0% | |
! | CTGGTAGGTTTTCTTTTTGT+TGG | + | chr8_3:6379652-6379671 | Msa1272610:intron | 35.0% |
! | TATGGTTCCTTTTAGTGTAC+TGG | + | chr8_3:6379708-6379727 | Msa1272610:intron | 35.0% |
!!! | TCCTTTTAGTGTACTGGTTA+AGG | + | chr8_3:6379714-6379733 | Msa1272610:intron | 35.0% |
TCCTTAACCAGTACACTAAA+AGG | - | chr8_3:6379718-6379737 | None:intergenic | 35.0% | |
TTTCTGTTATTAGGACAGGT+AGG | + | chr8_3:6379980-6379999 | Msa1272610:intron | 35.0% | |
TATTGTTCCCTACACATCTT+AGG | + | chr8_3:6380003-6380022 | Msa1272610:intron | 35.0% | |
! | GAATGCTTGGATTTTACAAG+GGG | - | chr8_3:6380213-6380232 | None:intergenic | 35.0% |
! | GGAATGCTTGGATTTTACAA+GGG | - | chr8_3:6380214-6380233 | None:intergenic | 35.0% |
! | AGGAATGCTTGGATTTTACA+AGG | - | chr8_3:6380215-6380234 | None:intergenic | 35.0% |
! | TTTGCATTCGTCACATTTTG+CGG | + | chr8_3:6380490-6380509 | Msa1272610:intron | 35.0% |
!!! | TTGCGGTTATTTTTGACAGA+TGG | + | chr8_3:6380507-6380526 | Msa1272610:intron | 35.0% |
ACTCTATTCTTAAGACGATC+AGG | + | chr8_3:6380556-6380575 | Msa1272610:CDS | 35.0% | |
! | TTTCAAGAGTTTTACACCCA+AGG | - | chr8_3:6380690-6380709 | None:intergenic | 35.0% |
! | ATACGTTCCATCTCCTTTTA+TGG | + | chr8_3:6380851-6380870 | Msa1272610:intron | 35.0% |
ACAATTTGTGCTAACATGCT+CGG | + | chr8_3:6380911-6380930 | Msa1272610:CDS | 35.0% | |
! | TTTACTGTGTTTCAAGTCCA+TGG | + | chr8_3:6380980-6380999 | Msa1272610:intron | 35.0% |
AGACTAATTCCAATGGTATG+TGG | - | chr8_3:6381078-6381097 | None:intergenic | 35.0% | |
!!! | ATAAAATTTGTTTTGGGGGG+GGG | - | chr8_3:6381240-6381259 | None:intergenic | 35.0% |
!!! | CATAAAATTTGTTTTGGGGG+GGG | - | chr8_3:6381241-6381260 | None:intergenic | 35.0% |
!!! | CCATAAAATTTGTTTTGGGG+GGG | - | chr8_3:6381242-6381261 | None:intergenic | 35.0% |
CATTAGAAACTCAGCTTTCT+AGG | + | chr8_3:6381264-6381283 | Msa1272610:intron | 35.0% | |
!! | ACTGCAATTCATTTTAGGGA+TGG | - | chr8_3:6381625-6381644 | None:intergenic | 35.0% |
AGGATCGAAAGAGAAACACA+CGG | - | chr8_3:6373294-6373313 | None:intergenic | 40.0% | |
!! | TCACGTGGATGAGTTGTTTT+TGG | + | chr8_3:6373639-6373658 | Msa1272610:intron | 40.0% |
TTATCATCTTCGCGTTACAG+TGG | + | chr8_3:6373670-6373689 | Msa1272610:intron | 40.0% | |
CTGGTAAGAATCAGCTCATA+CGG | + | chr8_3:6374130-6374149 | Msa1272610:five_prime_UTR | 40.0% | |
TGGTAAGAATCAGCTCATAC+GGG | + | chr8_3:6374131-6374150 | Msa1272610:five_prime_UTR | 40.0% | |
! | AGGGCTTTTAACAGAAGACA+TGG | - | chr8_3:6374278-6374297 | None:intergenic | 40.0% |
GCTTAACAACGATGAGATTC+AGG | + | chr8_3:6374306-6374325 | Msa1272610:CDS | 40.0% | |
CGTAATGTTAACTGTTGCCT+TGG | + | chr8_3:6374385-6374404 | Msa1272610:intron | 40.0% | |
!!! | GTTGCCTTGGTTTTATGGAT+TGG | + | chr8_3:6374398-6374417 | Msa1272610:intron | 40.0% |
TAGCCAAAGTAGTCCTTACA+AGG | + | chr8_3:6374443-6374462 | Msa1272610:intron | 40.0% | |
! | AAGCCTTGTAAGGACTACTT+TGG | - | chr8_3:6374449-6374468 | None:intergenic | 40.0% |
TTGCTCGTGAAAAAAGTTCC+TGG | - | chr8_3:6374720-6374739 | None:intergenic | 40.0% | |
!!! | AGGAACTTTTTTCACGAGCA+AGG | + | chr8_3:6374719-6374738 | Msa1272610:intron | 40.0% |
!!! | GGAACTTTTTTCACGAGCAA+GGG | + | chr8_3:6374720-6374739 | Msa1272610:intron | 40.0% |
!!! | GAACTTTTTTCACGAGCAAG+GGG | + | chr8_3:6374721-6374740 | Msa1272610:CDS | 40.0% |
!!! | AACTTTTTTCACGAGCAAGG+GGG | + | chr8_3:6374722-6374741 | Msa1272610:CDS | 40.0% |
AACAGCAATCTGTTCACGAA+GGG | - | chr8_3:6374767-6374786 | None:intergenic | 40.0% | |
AAACAGCAATCTGTTCACGA+AGG | - | chr8_3:6374768-6374787 | None:intergenic | 40.0% | |
AATGATCTTGCTCGAAGGAA+AGG | + | chr8_3:6375071-6375090 | Msa1272610:intron | 40.0% | |
ATTTCGACAAGGTTTCACAC+TGG | + | chr8_3:6375372-6375391 | Msa1272610:intron | 40.0% | |
GGAATCTCCTCATGTATTTC+TGG | + | chr8_3:6375661-6375680 | Msa1272610:intron | 40.0% | |
! | GACTTGGTTACTAACAAGAC+AGG | + | chr8_3:6376194-6376213 | Msa1272610:intron | 40.0% |
GTTTCCTGCTTCATGCATTT+CGG | + | chr8_3:6376558-6376577 | Msa1272610:intron | 40.0% | |
TTTCCTGCTTCATGCATTTC+GGG | + | chr8_3:6376559-6376578 | Msa1272610:intron | 40.0% | |
TAACCATGCTGTTGAAAGTC+CGG | + | chr8_3:6376829-6376848 | Msa1272610:CDS | 40.0% | |
CTGTCATATTGCTCATTGGT+TGG | - | chr8_3:6377059-6377078 | None:intergenic | 40.0% | |
CAACCAATGAGCAATATGAC+AGG | + | chr8_3:6377057-6377076 | Msa1272610:CDS | 40.0% | |
ATGACAGGATATATGAACCC+AGG | + | chr8_3:6377072-6377091 | Msa1272610:CDS | 40.0% | |
TATATGAACCCAGGTGTTAG+TGG | + | chr8_3:6377081-6377100 | Msa1272610:CDS | 40.0% | |
TTACATCACCACTAACACCT+GGG | - | chr8_3:6377092-6377111 | None:intergenic | 40.0% | |
TTTACATCACCACTAACACC+TGG | - | chr8_3:6377093-6377112 | None:intergenic | 40.0% | |
! | GGTGTTAGTGGTGATGTAAA+CGG | + | chr8_3:6377093-6377112 | Msa1272610:intron | 40.0% |
! | ATGTAAACGGAGCATTCAGA+AGG | + | chr8_3:6377106-6377125 | Msa1272610:intron | 40.0% |
! | TGTAAACGGAGCATTCAGAA+GGG | + | chr8_3:6377107-6377126 | Msa1272610:intron | 40.0% |
ATTCAGAAGGGTCAACTATC+AGG | + | chr8_3:6377119-6377138 | Msa1272610:intron | 40.0% | |
TTCTAATGCTGCTGATAGGT+TGG | + | chr8_3:6377146-6377165 | Msa1272610:intron | 40.0% | |
!! | GATTAGCCTTATGGTTGTCA+AGG | + | chr8_3:6377208-6377227 | Msa1272610:intron | 40.0% |
CAAATCCTAACCATTGGATC+AGG | + | chr8_3:6377552-6377571 | Msa1272610:intron | 40.0% | |
AACCATGTTGGAAGGAAGAT+AGG | - | chr8_3:6377761-6377780 | None:intergenic | 40.0% | |
! | CATCCAAGAAGTTTTTCTCC+AGG | - | chr8_3:6378012-6378031 | None:intergenic | 40.0% |
GGAGAAAAACTTCTTGGATG+TGG | + | chr8_3:6378012-6378031 | Msa1272610:CDS | 40.0% | |
AACTACATACTCTGGATTCG+TGG | - | chr8_3:6378341-6378360 | None:intergenic | 40.0% | |
AGCAGTTGAGTGTATTCCAA+TGG | + | chr8_3:6378387-6378406 | Msa1272610:CDS | 40.0% | |
GCGAGTAATGATCCACATAT+TGG | - | chr8_3:6378829-6378848 | None:intergenic | 40.0% | |
! | TGGGATGAGGCTCTTTTATA+GGG | + | chr8_3:6378896-6378915 | Msa1272610:intron | 40.0% |
ACTTCGATACTCTCTCATCA+CGG | + | chr8_3:6379538-6379557 | Msa1272610:intron | 40.0% | |
CAATCTCATGCTGCATTTCT+GGG | - | chr8_3:6379588-6379607 | None:intergenic | 40.0% | |
TCAATCTCATGCTGCATTTC+TGG | - | chr8_3:6379589-6379608 | None:intergenic | 40.0% | |
TTCAGTGTTCAACTTCTGGT+AGG | + | chr8_3:6379637-6379656 | Msa1272610:intron | 40.0% | |
! | TTGCTAGCCTAAGATGTGTA+GGG | - | chr8_3:6380013-6380032 | None:intergenic | 40.0% |
! | ATTGCTAGCCTAAGATGTGT+AGG | - | chr8_3:6380014-6380033 | None:intergenic | 40.0% |
CTGCAGATTAAAGTTCCATG+TGG | + | chr8_3:6380879-6380898 | Msa1272610:intron | 40.0% | |
ACATTAGCATGCATTCACCA+TGG | - | chr8_3:6381000-6381019 | None:intergenic | 40.0% | |
CCAACAGAGACTAATTCCAA+TGG | - | chr8_3:6381085-6381104 | None:intergenic | 40.0% | |
! | CCATTGGAATTAGTCTCTGT+TGG | + | chr8_3:6381082-6381101 | Msa1272610:intron | 40.0% |
! | AAAAGTAGCACCGGAAACAT+AGG | + | chr8_3:6381120-6381139 | Msa1272610:intron | 40.0% |
ATTCCAACTGCCTATGTTTC+CGG | - | chr8_3:6381133-6381152 | None:intergenic | 40.0% | |
!!! | TAAAATTTGTTTTGGGGGGG+GGG | - | chr8_3:6381239-6381258 | None:intergenic | 40.0% |
! | CCCCCCCAAAACAAATTTTA+TGG | + | chr8_3:6381239-6381258 | Msa1272610:intron | 40.0% |
GAACGAATATCAGAGAGCAA+AGG | - | chr8_3:6381322-6381341 | None:intergenic | 40.0% | |
GAAAGAGAAACACACGGAGA+AGG | - | chr8_3:6373288-6373307 | None:intergenic | 45.0% | |
GCCAACGTTGTACTTGCTTT+CGG | + | chr8_3:6373347-6373366 | Msa1272610:five_prime_UTR | 45.0% | |
ACCGAAAGCAAGTACAACGT+TGG | - | chr8_3:6373351-6373370 | None:intergenic | 45.0% | |
AACTCATCCACGTGAACTTG+CGG | - | chr8_3:6373634-6373653 | None:intergenic | 45.0% | |
GGAGACTAATATGTAGAGCC+CGG | + | chr8_3:6373691-6373710 | Msa1272610:intron | 45.0% | |
TGTAGAGCCCGGATTCAAAT+AGG | + | chr8_3:6373702-6373721 | Msa1272610:intron | 45.0% | |
TTTGCCGCCTATTTGAATCC+GGG | - | chr8_3:6373712-6373731 | None:intergenic | 45.0% | |
GTTTGCCGCCTATTTGAATC+CGG | - | chr8_3:6373713-6373732 | None:intergenic | 45.0% | |
TCAACGAGGTCACTCATTGT+GGG | - | chr8_3:6373798-6373817 | None:intergenic | 45.0% | |
ATCAACGAGGTCACTCATTG+TGG | - | chr8_3:6373799-6373818 | None:intergenic | 45.0% | |
! | CGTATGAGCTGATTCTTACC+AGG | - | chr8_3:6374132-6374151 | None:intergenic | 45.0% |
CTCATACGGGAACCTTGATT+TGG | + | chr8_3:6374144-6374163 | Msa1272610:five_prime_UTR | 45.0% | |
AACGATGAGATTCAGGGTCA+AGG | + | chr8_3:6374313-6374332 | Msa1272610:CDS | 45.0% | |
GGTCAAGGCTCAGAATTTCT+AGG | + | chr8_3:6374328-6374347 | Msa1272610:CDS | 45.0% | |
! | AAGGCTCAGAATTTCTAGGC+AGG | + | chr8_3:6374332-6374351 | Msa1272610:CDS | 45.0% |
! | AAGCAGCATCAAGCCTTGTA+AGG | - | chr8_3:6374459-6374478 | None:intergenic | 45.0% |
TGATGCACTTAATCACGCTC+AGG | + | chr8_3:6374533-6374552 | Msa1272610:CDS | 45.0% | |
CCTTCGAGCAAGATCATTAG+CGG | - | chr8_3:6375069-6375088 | None:intergenic | 45.0% | |
GCAGCAACCAGAAATACATG+AGG | - | chr8_3:6375671-6375690 | None:intergenic | 45.0% | |
GTCATCTATGCTAGGATTGC+TGG | + | chr8_3:6375800-6375819 | Msa1272610:CDS | 45.0% | |
CTAGGATTGCTGGCAGAATA+TGG | + | chr8_3:6375810-6375829 | Msa1272610:CDS | 45.0% | |
TGCTGGCAGAATATGGTTTG+TGG | + | chr8_3:6375817-6375836 | Msa1272610:CDS | 45.0% | |
AGACAGGGTCCGAGAAAATA+AGG | + | chr8_3:6376210-6376229 | Msa1272610:intron | 45.0% | |
AACCATGCTGTTGAAAGTCC+GGG | + | chr8_3:6376830-6376849 | Msa1272610:CDS | 45.0% | |
GGAAACCCTTGACAACCATA+AGG | - | chr8_3:6377217-6377236 | None:intergenic | 45.0% | |
GACCTATCTTCCTTCCAACA+TGG | + | chr8_3:6377756-6377775 | Msa1272610:CDS | 45.0% | |
ATTGGCATGCAAGAGAGAAC+TGG | + | chr8_3:6377792-6377811 | Msa1272610:CDS | 45.0% | |
!! | ACTGCTTCCTCTGTTTCTGA+GGG | + | chr8_3:6377876-6377895 | Msa1272610:CDS | 45.0% |
CAAATCTTTCTAGATGGCCC+TGG | + | chr8_3:6377952-6377971 | Msa1272610:intron | 45.0% | |
AATTCCTGGGTTTGTGTCAG+TGG | + | chr8_3:6378146-6378165 | Msa1272610:intron | 45.0% | |
ATTCCTGGGTTTGTGTCAGT+GGG | + | chr8_3:6378147-6378166 | Msa1272610:intron | 45.0% | |
ACTAGGCAGTACATTGAAGG+TGG | + | chr8_3:6378190-6378209 | Msa1272610:intron | 45.0% | |
TCGGCTGTAACTACATACTC+TGG | - | chr8_3:6378349-6378368 | None:intergenic | 45.0% | |
! | TGTAACAGTATGGCTGACTC+CGG | + | chr8_3:6378800-6378819 | Msa1272610:intron | 45.0% |
TGACTCCGGTTACCAATATG+TGG | + | chr8_3:6378814-6378833 | Msa1272610:intron | 45.0% | |
ATATCCTAGCTAGTGGGATG+AGG | + | chr8_3:6378883-6378902 | Msa1272610:intron | 45.0% | |
! | GTGGGATGAGGCTCTTTTAT+AGG | + | chr8_3:6378895-6378914 | Msa1272610:intron | 45.0% |
GTGTGTGTGGGGTTTAGATA+TGG | - | chr8_3:6379263-6379282 | None:intergenic | 45.0% | |
!! | TGAGAGAGTATCGAAGTCGA+AGG | - | chr8_3:6379535-6379554 | None:intergenic | 45.0% |
! | GATAAGTGGTACTGAAGCTG+CGG | + | chr8_3:6380591-6380610 | Msa1272610:CDS | 45.0% |
AATTGTGACGAGAGACCACA+TGG | - | chr8_3:6380897-6380916 | None:intergenic | 45.0% | |
TTTGTGCTAACATGCTCGGA+TGG | + | chr8_3:6380915-6380934 | Msa1272610:CDS | 45.0% | |
!!! | AAAATTTGTTTTGGGGGGGG+GGG | - | chr8_3:6381238-6381257 | None:intergenic | 45.0% |
TCTCGCGTTCTGCAAAGAAA+CGG | - | chr8_3:6381461-6381480 | None:intergenic | 45.0% | |
!! | TAATATTAATAACAAATATA+GGG | - | chr8_3:6377583-6377602 | None:intergenic | 5.0% |
!! | ATAATATTAATAACAAATAT+AGG | - | chr8_3:6377584-6377603 | None:intergenic | 5.0% |
!!! | AAAAATTCTTTTTTTTTTAA+TGG | + | chr8_3:6378256-6378275 | Msa1272610:intron | 5.0% |
AGAGAAACACACGGAGAAGG+AGG | - | chr8_3:6373285-6373304 | None:intergenic | 50.0% | |
AGAGCCCGGATTCAAATAGG+CGG | + | chr8_3:6373705-6373724 | Msa1272610:intron | 50.0% | |
! | GACATGGAATGGCTTGCACA+AGG | - | chr8_3:6374262-6374281 | None:intergenic | 50.0% |
TCTGTTAAAAGCCCTTCGCG+CGG | + | chr8_3:6374283-6374302 | Msa1272610:CDS | 50.0% | |
CAATCTGTTCACGAAGGGAG+AGG | - | chr8_3:6374762-6374781 | None:intergenic | 50.0% | |
CCGCTAATGATCTTGCTCGA+AGG | + | chr8_3:6375066-6375085 | Msa1272610:intron | 50.0% | |
TAGGTCATTGCCTGCAAGCA+AGG | - | chr8_3:6375320-6375339 | None:intergenic | 50.0% | |
!! | GAAGAGGCATTCATAACGCG+AGG | - | chr8_3:6375843-6375862 | None:intergenic | 50.0% |
CATCCCGAAATGCATGAAGC+AGG | - | chr8_3:6376565-6376584 | None:intergenic | 50.0% | |
TGGCTGTCTTACTTTCTCCC+TGG | + | chr8_3:6376612-6376631 | Msa1272610:intron | 50.0% | |
AACCCGGACTTTCAACAGCA+TGG | - | chr8_3:6376835-6376854 | None:intergenic | 50.0% | |
TTTGTCGGATTTGCGGAACC+CGG | - | chr8_3:6376851-6376870 | None:intergenic | 50.0% | |
GTCTCGTCATGCTCATGTGA+AGG | - | chr8_3:6377858-6377877 | None:intergenic | 50.0% | |
!! | GACTGCTTCCTCTGTTTCTG+AGG | + | chr8_3:6377875-6377894 | Msa1272610:CDS | 50.0% |
ATCTGCGGTGATGCTATTCC+TGG | + | chr8_3:6377991-6378010 | Msa1272610:CDS | 50.0% | |
CAAAGAGAAGTTCGACGGAC+TGG | - | chr8_3:6378042-6378061 | None:intergenic | 50.0% | |
! | TGGGTTTGTGTCAGTGGGTT+CGG | + | chr8_3:6378152-6378171 | Msa1272610:intron | 50.0% |
GGCACTAGGCAGTACATTGA+AGG | + | chr8_3:6378187-6378206 | Msa1272610:CDS | 50.0% | |
TGACGGCCTTTATCGTCCAT+TGG | - | chr8_3:6378406-6378425 | None:intergenic | 50.0% | |
AATGGACGATAAAGGCCGTC+AGG | + | chr8_3:6378405-6378424 | Msa1272610:CDS | 50.0% | |
ACATGGTGTGTGTGTGTGTG+GGG | - | chr8_3:6379274-6379293 | None:intergenic | 50.0% | |
CACATGGTGTGTGTGTGTGT+GGG | - | chr8_3:6379275-6379294 | None:intergenic | 50.0% | |
TCACATGGTGTGTGTGTGTG+TGG | - | chr8_3:6379276-6379295 | None:intergenic | 50.0% | |
!! | GAGAGTATCGAAGTCGAAGG+AGG | - | chr8_3:6379532-6379551 | None:intergenic | 50.0% |
AGCTCCCAAAGAGATCGCAA+AGG | + | chr8_3:6380129-6380148 | Msa1272610:intron | 50.0% | |
CACGCCTTTGCGATCTCTTT+GGG | - | chr8_3:6380136-6380155 | None:intergenic | 50.0% | |
TCACGCCTTTGCGATCTCTT+TGG | - | chr8_3:6380137-6380156 | None:intergenic | 50.0% | |
TGCATCTGGAGAGGAATGCT+TGG | - | chr8_3:6380226-6380245 | None:intergenic | 50.0% | |
!! | TCACTATTCTGGGGTGCATC+TGG | - | chr8_3:6380240-6380259 | None:intergenic | 50.0% |
!!! | AAATTTGTTTTGGGGGGGGG+GGG | - | chr8_3:6381237-6381256 | None:intergenic | 50.0% |
TCGCGTTCTGCAAAGAAACG+GGG | - | chr8_3:6381459-6381478 | None:intergenic | 50.0% | |
CTCGCGTTCTGCAAAGAAAC+GGG | - | chr8_3:6381460-6381479 | None:intergenic | 50.0% | |
! | CTTACTCTGGAAGAGTCGCA+TGG | - | chr8_3:6381498-6381517 | None:intergenic | 50.0% |
CATGCGACTCTTCCAGAGTA+AGG | + | chr8_3:6381496-6381515 | Msa1272610:CDS | 50.0% | |
TCATCCACGTGAACTTGCGG+AGG | - | chr8_3:6373631-6373650 | None:intergenic | 55.0% | |
GTCACTCATTGTGGGACGGA+GGG | - | chr8_3:6373790-6373809 | None:intergenic | 55.0% | |
CGAGGTCACTCATTGTGGGA+CGG | - | chr8_3:6373794-6373813 | None:intergenic | 55.0% | |
CTGTTAAAAGCCCTTCGCGC+GGG | + | chr8_3:6374284-6374303 | Msa1272610:CDS | 55.0% | |
! | CTTGATGCTGCTTGTGCTGC+AGG | + | chr8_3:6374466-6374485 | Msa1272610:intron | 55.0% |
CGCTCAGGACCTAGACACTA+TGG | + | chr8_3:6374548-6374567 | Msa1272610:CDS | 55.0% | |
!! | CCTGCAAGCAAGGCACTGTA+TGG | - | chr8_3:6375310-6375329 | None:intergenic | 55.0% |
CCATACAGTGCCTTGCTTGC+AGG | + | chr8_3:6375307-6375326 | Msa1272610:intron | 55.0% | |
ATAGAGCCGCGGGCAAATAG+CGG | + | chr8_3:6375590-6375609 | Msa1272610:intron | 55.0% | |
! | TGCGGCAGTCTCAGAAGTGT+TGG | - | chr8_3:6376395-6376414 | None:intergenic | 55.0% |
CCTGCCCTGATCCAATGGTT+AGG | - | chr8_3:6377560-6377579 | None:intergenic | 55.0% | |
CCTAACCATTGGATCAGGGC+AGG | + | chr8_3:6377557-6377576 | Msa1272610:intron | 55.0% | |
TCTCTGCGCAAGTTCTTCCG+TGG | - | chr8_3:6377738-6377757 | None:intergenic | 55.0% | |
GAACCCACTGACACAAACCC+AGG | - | chr8_3:6378153-6378172 | None:intergenic | 55.0% | |
AGAGCCTCATCCCACTAGCT+AGG | - | chr8_3:6378890-6378909 | None:intergenic | 55.0% | |
TTTGTCAGGGGGAGCTAGTG+AGG | + | chr8_3:6379146-6379165 | Msa1272610:intron | 55.0% | |
!! | ATTCTGGGGTGCATCTGGAG+AGG | - | chr8_3:6380235-6380254 | None:intergenic | 55.0% |
CTCTAAGCACAGTGAACGCC+CGG | + | chr8_3:6380949-6380968 | Msa1272610:CDS | 55.0% | |
GCACCGGAAACATAGGCAGT+TGG | + | chr8_3:6381127-6381146 | Msa1272610:intron | 55.0% | |
! | ACCAATTTGGGACCCCTTCC+CGG | + | chr8_3:6381171-6381190 | Msa1272610:intron | 55.0% |
CTAAAGCTCCCGCATACGCA+AGG | - | chr8_3:6381198-6381217 | None:intergenic | 55.0% | |
! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr8_3:6381203-6381222 | Msa1272610:intron | 55.0% |
!!! | AATTTGTTTTGGGGGGGGGG+GGG | - | chr8_3:6381236-6381255 | None:intergenic | 55.0% |
GACTCCTCCGCAAGTTCACG+TGG | + | chr8_3:6373624-6373643 | Msa1272610:intron | 60.0% | |
GGTCACTCATTGTGGGACGG+AGG | - | chr8_3:6373791-6373810 | None:intergenic | 60.0% | |
CGTTGTTAAGCCCGCGCGAA+GGG | - | chr8_3:6374297-6374316 | None:intergenic | 60.0% | |
TCGTTGTTAAGCCCGCGCGA+AGG | - | chr8_3:6374298-6374317 | None:intergenic | 60.0% | |
ACGAGCAAGGGGGCAAGAAG+AGG | + | chr8_3:6374732-6374751 | Msa1272610:CDS | 60.0% | |
TAGGGCCTGCCCTGATCCAA+TGG | - | chr8_3:6377565-6377584 | None:intergenic | 60.0% | |
CGGGCGTTCACTGTGCTTAG+AGG | - | chr8_3:6380951-6380970 | None:intergenic | 60.0% | |
TCCGGGAAGGGGTCCCAAAT+TGG | - | chr8_3:6381175-6381194 | None:intergenic | 60.0% | |
CATACGCAAGGTCCGGGAAG+GGG | - | chr8_3:6381186-6381205 | None:intergenic | 60.0% | |
GCATACGCAAGGTCCGGGAA+GGG | - | chr8_3:6381187-6381206 | None:intergenic | 60.0% | |
CTTCCCGGACCTTGCGTATG+CGG | + | chr8_3:6381186-6381205 | Msa1272610:intron | 60.0% | |
TTCCCGGACCTTGCGTATGC+GGG | + | chr8_3:6381187-6381206 | Msa1272610:intron | 60.0% | |
! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr8_3:6381204-6381223 | Msa1272610:intron | 60.0% |
!!! | ATTTGTTTTGGGGGGGGGGG+GGG | - | chr8_3:6381235-6381254 | None:intergenic | 60.0% |
CGGCTTCCGCTATTTGCCCG+CGG | - | chr8_3:6375599-6375618 | None:intergenic | 65.0% | |
CGCATACGCAAGGTCCGGGA+AGG | - | chr8_3:6381188-6381207 | None:intergenic | 65.0% | |
CTCCCGCATACGCAAGGTCC+GGG | - | chr8_3:6381192-6381211 | None:intergenic | 65.0% | |
GCTCCCGCATACGCAAGGTC+CGG | - | chr8_3:6381193-6381212 | None:intergenic | 65.0% | |
!!! | TTTGTTTTGGGGGGGGGGGG+GGG | - | chr8_3:6381234-6381253 | None:intergenic | 65.0% |
!!! | TTGTTTTGGGGGGGGGGGGG+GGG | - | chr8_3:6381233-6381252 | None:intergenic | 70.0% |
! | GGGGGGGGGGGGGGGCAGCC+CGG | - | chr8_3:6381225-6381244 | None:intergenic | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 6373182 | 6381649 | 6373182 | ID=Msa1272610;Name=Msa1272610 |
chr8_3 | mRNA | 6373182 | 6381649 | 6373182 | ID=Msa1272610-mRNA-1;Parent=Msa1272610;Name=Msa1272610-mRNA-1;_AED=0.21;_eAED=0.21;_QI=341|0.88|0.88|1|0.88|0.88|18|57|502 |
chr8_3 | exon | 6373182 | 6373368 | 6373182 | ID=Msa1272610-mRNA-1:exon:2291;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6374123 | 6374353 | 6374123 | ID=Msa1272610-mRNA-1:exon:2292;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6374488 | 6374569 | 6374488 | ID=Msa1272610-mRNA-1:exon:2293;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6374721 | 6374798 | 6374721 | ID=Msa1272610-mRNA-1:exon:2294;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6374877 | 6374936 | 6374877 | ID=Msa1272610-mRNA-1:exon:2295;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6375771 | 6375881 | 6375771 | ID=Msa1272610-mRNA-1:exon:2296;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6376342 | 6376383 | 6376342 | ID=Msa1272610-mRNA-1:exon:2297;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6376779 | 6376892 | 6376779 | ID=Msa1272610-mRNA-1:exon:2298;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6377006 | 6377107 | 6377006 | ID=Msa1272610-mRNA-1:exon:2299;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6377744 | 6377897 | 6377744 | ID=Msa1272610-mRNA-1:exon:2300;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6377965 | 6378071 | 6377965 | ID=Msa1272610-mRNA-1:exon:2301;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6378166 | 6378208 | 6378166 | ID=Msa1272610-mRNA-1:exon:2302;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6378335 | 6378426 | 6378335 | ID=Msa1272610-mRNA-1:exon:2303;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6379154 | 6379202 | 6379154 | ID=Msa1272610-mRNA-1:exon:2304;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6379584 | 6379654 | 6379584 | ID=Msa1272610-mRNA-1:exon:2305;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6380526 | 6380645 | 6380526 | ID=Msa1272610-mRNA-1:exon:2306;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6380885 | 6380970 | 6380885 | ID=Msa1272610-mRNA-1:exon:2307;Parent=Msa1272610-mRNA-1 |
chr8_3 | exon | 6381472 | 6381649 | 6381472 | ID=Msa1272610-mRNA-1:exon:2308;Parent=Msa1272610-mRNA-1 |
chr8_3 | five_prime_UTR | 6373182 | 6373368 | 6373182 | ID=Msa1272610-mRNA-1:five_prime_utr;Parent=Msa1272610-mRNA-1 |
chr8_3 | five_prime_UTR | 6374123 | 6374276 | 6374123 | ID=Msa1272610-mRNA-1:five_prime_utr;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6374277 | 6374353 | 6374277 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6374488 | 6374569 | 6374488 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6374721 | 6374798 | 6374721 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6374877 | 6374936 | 6374877 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6375771 | 6375881 | 6375771 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6376342 | 6376383 | 6376342 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6376779 | 6376892 | 6376779 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6377006 | 6377107 | 6377006 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6377744 | 6377897 | 6377744 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6377965 | 6378071 | 6377965 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6378166 | 6378208 | 6378166 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6378335 | 6378426 | 6378335 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6379154 | 6379202 | 6379154 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6379584 | 6379654 | 6379584 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6380526 | 6380645 | 6380526 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6380885 | 6380970 | 6380885 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | CDS | 6381472 | 6381592 | 6381472 | ID=Msa1272610-mRNA-1:cds;Parent=Msa1272610-mRNA-1 |
chr8_3 | three_prime_UTR | 6381593 | 6381649 | 6381593 | ID=Msa1272610-mRNA-1:three_prime_utr;Parent=Msa1272610-mRNA-1 |
Gene Sequence |
Protein sequence |