Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483800 | XP_013459409.1 | 97.660 | 1154 | 27 | 0 | 1 | 1154 | 1 | 1154 | 0.0 | 2338 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483800 | sp|Q9SX33|ALA9_ARATH | 73.137 | 1154 | 293 | 6 | 6 | 1148 | 13 | 1160 | 0.0 | 1774 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483800 | A0A072V5J0 | 97.660 | 1154 | 27 | 0 | 1 | 1154 | 1 | 1154 | 0.0 | 2338 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029240 | Msa0483800 | 0.824597 | 7.403486e-54 | -8.615850e-47 |
| Msa0042550 | Msa0483800 | 0.817439 | 3.295127e-52 | -8.615850e-47 |
| Msa0078610 | Msa0483800 | 0.809551 | 1.789171e-50 | -8.615850e-47 |
| Msa0092410 | Msa0483800 | 0.805338 | 1.400655e-49 | -8.615850e-47 |
| Msa0178510 | Msa0483800 | 0.802388 | 5.744421e-49 | -8.615850e-47 |
| Msa0187030 | Msa0483800 | 0.806002 | 1.016226e-49 | -8.615850e-47 |
| Msa0187830 | Msa0483800 | 0.803613 | 3.206749e-49 | -8.615850e-47 |
| Msa0190970 | Msa0483800 | 0.803009 | 4.276027e-49 | -8.615850e-47 |
| Msa0215590 | Msa0483800 | 0.811898 | 5.561615e-51 | -8.615850e-47 |
| Msa0217700 | Msa0483800 | 0.801743 | 7.796950e-49 | -8.615850e-47 |
| Msa0225220 | Msa0483800 | 0.808784 | 2.612210e-50 | -8.615850e-47 |
| Msa0227340 | Msa0483800 | 0.802015 | 6.856476e-49 | -8.615850e-47 |
| Msa0232720 | Msa0483800 | 0.802038 | 6.780694e-49 | -8.615850e-47 |
| Msa0381610 | Msa0483800 | -0.800360 | 1.495110e-48 | -8.615850e-47 |
| Msa0389390 | Msa0483800 | 0.812747 | 3.629220e-51 | -8.615850e-47 |
| Msa0393620 | Msa0483800 | 0.806603 | 7.592847e-50 | -8.615850e-47 |
| Msa0394140 | Msa0483800 | 0.804897 | 1.732950e-49 | -8.615850e-47 |
| Msa0402180 | Msa0483800 | 0.992306 | 1.667755e-192 | -8.615850e-47 |
| Msa0410580 | Msa0483800 | 0.812620 | 3.867516e-51 | -8.615850e-47 |
| Msa0443020 | Msa0483800 | 0.805019 | 1.633967e-49 | -8.615850e-47 |
| Msa0445280 | Msa0483800 | 0.815992 | 6.958047e-52 | -8.615850e-47 |
| Msa0264830 | Msa0483800 | 0.825948 | 3.547890e-54 | -8.615850e-47 |
| Msa0271550 | Msa0483800 | 0.801508 | 8.710079e-49 | -8.615850e-47 |
| Msa0296480 | Msa0483800 | 0.841699 | 4.056001e-58 | -8.615850e-47 |
| Msa0302870 | Msa0483800 | 0.813334 | 2.698379e-51 | -8.615850e-47 |
| Msa0308460 | Msa0483800 | 0.844181 | 8.861455e-59 | -8.615850e-47 |
| Msa0333650 | Msa0483800 | 0.812537 | 4.032677e-51 | -8.615850e-47 |
| Msa0334770 | Msa0483800 | 0.819161 | 1.343116e-52 | -8.615850e-47 |
| Msa0340340 | Msa0483800 | 0.826692 | 2.359051e-54 | -8.615850e-47 |
| Msa0340690 | Msa0483800 | 0.815823 | 7.586620e-52 | -8.615850e-47 |
| Msa0340710 | Msa0483800 | 0.824203 | 9.168688e-54 | -8.615850e-47 |
| Msa0348550 | Msa0483800 | 0.808421 | 3.123743e-50 | -8.615850e-47 |
| Msa0348620 | Msa0483800 | 0.805660 | 1.198952e-49 | -8.615850e-47 |
| Msa0363530 | Msa0483800 | 0.801690 | 7.993750e-49 | -8.615850e-47 |
| Msa0483800 | Msa0492710 | 0.812256 | 4.644787e-51 | -8.615850e-47 |
| Msa0483800 | Msa0506860 | 0.851534 | 8.335754e-61 | -8.615850e-47 |
| Msa0483800 | Msa0532930 | 0.824366 | 8.391166e-54 | -8.615850e-47 |
| Msa0483800 | Msa0559500 | 0.801057 | 1.077441e-48 | -8.615850e-47 |
| Msa0483800 | Msa0589390 | 0.803865 | 2.842971e-49 | -8.615850e-47 |
| Msa0483800 | Msa0613460 | 0.808607 | 2.850868e-50 | -8.615850e-47 |
| Msa0483800 | Msa0615010 | 0.817135 | 3.858766e-52 | -8.615850e-47 |
| Msa0483800 | Msa0624960 | 0.821437 | 4.040110e-53 | -8.615850e-47 |
| Msa0483800 | Msa0661320 | 0.807391 | 5.171328e-50 | -8.615850e-47 |
| Msa0483800 | Msa0667740 | 0.806092 | 9.729677e-50 | -8.615850e-47 |
| Msa0483800 | Msa0695870 | 0.806608 | 7.575175e-50 | -8.615850e-47 |
| Msa0483800 | Msa0708310 | 0.800727 | 1.258484e-48 | -8.615850e-47 |
| Msa0483800 | Msa0715410 | 0.816126 | 6.494917e-52 | -8.615850e-47 |
| Msa0483800 | Msa0749440 | 0.809168 | 2.161663e-50 | -8.615850e-47 |
| Msa0483800 | Msa0755050 | 0.800850 | 1.187884e-48 | -8.615850e-47 |
| Msa0483800 | Msa0795070 | 0.808250 | 3.396241e-50 | -8.615850e-47 |
| Msa0483800 | Msa0817460 | 0.806032 | 1.001539e-49 | -8.615850e-47 |
| Msa0483800 | Msa0825870 | 0.815544 | 8.754844e-52 | -8.615850e-47 |
| Msa0483800 | Msa0828240 | 0.809779 | 1.598306e-50 | -8.615850e-47 |
| Msa0483800 | Msa0828660 | 0.840987 | 6.242568e-58 | -8.615850e-47 |
| Msa0483800 | Msa0844110 | 0.806190 | 9.278901e-50 | -8.615850e-47 |
| Msa0483800 | Msa0860400 | 0.800830 | 1.198934e-48 | -8.615850e-47 |
| Msa0483800 | Msa0865330 | 0.819767 | 9.769739e-53 | -8.615850e-47 |
| Msa0483800 | Msa0868160 | 0.808362 | 3.214408e-50 | -8.615850e-47 |
| Msa0483800 | Msa0870060 | 0.813023 | 3.156258e-51 | -8.615850e-47 |
| Msa0483800 | Msa0902830 | 0.800285 | 1.548106e-48 | -8.615850e-47 |
| Msa0483800 | Msa0935770 | 0.823628 | 1.250246e-53 | -8.615850e-47 |
| Msa0483800 | Msa0936390 | 0.800280 | 1.551765e-48 | -8.615850e-47 |
| Msa0483800 | Msa1026940 | 0.806059 | 9.887062e-50 | -8.615850e-47 |
| Msa0483800 | Msa1029420 | 0.817934 | 2.548333e-52 | -8.615850e-47 |
| Msa0483800 | Msa1038080 | 0.821020 | 5.041169e-53 | -8.615850e-47 |
| Msa0483800 | Msa1052330 | 0.801074 | 1.069037e-48 | -8.615850e-47 |
| Msa0483800 | Msa1068280 | 0.826790 | 2.235439e-54 | -8.615850e-47 |
| Msa0483800 | Msa1109090 | 0.813804 | 2.125885e-51 | -8.615850e-47 |
| Msa0483800 | Msa1180500 | 0.804644 | 1.956340e-49 | -8.615850e-47 |
| Msa0483800 | Msa1185110 | 0.823144 | 1.622609e-53 | -8.615850e-47 |
| Msa0483800 | Msa1201200 | 0.802727 | 4.890166e-49 | -8.615850e-47 |
| Msa0483800 | Msa1272610 | 0.813682 | 2.261740e-51 | -8.615850e-47 |
| Msa0483800 | Msa1310440 | 0.834622 | 2.694628e-56 | -8.615850e-47 |
| Msa0483800 | Msa1312520 | 0.805172 | 1.517568e-49 | -8.615850e-47 |
| Msa0483800 | Msa1317130 | 0.802636 | 5.107871e-49 | -8.615850e-47 |
| Msa0483800 | Msa1344340 | 0.818413 | 1.986124e-52 | -8.615850e-47 |
| Msa0483800 | Msa1371940 | 0.809479 | 1.853815e-50 | -8.615850e-47 |
| Msa0483800 | Msa1372150 | 0.809419 | 1.910211e-50 | -8.615850e-47 |
| Msa0483800 | Msa1418280 | 0.807016 | 6.210155e-50 | -8.615850e-47 |
| Msa0483800 | Msa1435070 | 0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0483800 | Msa1445390 | -0.800777 | 1.229382e-48 | -8.615850e-47 |
| Msa0483800 | Msa1446780 | 0.823762 | 1.163414e-53 | -8.615850e-47 |
| Msa0483800 | Msa1457160 | 0.819254 | 1.278818e-52 | -8.615850e-47 |
| Msa0483800 | Msa1458510 | 0.818752 | 1.664047e-52 | -8.615850e-47 |
| Msa0483800 | Msa1461550 | 0.805830 | 1.104751e-49 | -8.615850e-47 |
| Msa0483800 | Msa1462360 | 0.820459 | 6.782010e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483800 | MtrunA17_Chr3g0091611 | 97.660 | 1154 | 27 | 0 | 1 | 1154 | 1 | 1154 | 0.0 | 2338 |
| Msa0483800 | MtrunA17_Chr8g0368691 | 77.133 | 1172 | 247 | 5 | 2 | 1154 | 5 | 1174 | 0.0 | 1880 |
| Msa0483800 | MtrunA17_Chr0c05g0492131 | 76.970 | 1155 | 257 | 7 | 5 | 1154 | 4 | 1154 | 0.0 | 1824 |
| Msa0483800 | MtrunA17_Chr4g0062251 | 67.446 | 1155 | 365 | 5 | 2 | 1148 | 5 | 1156 | 0.0 | 1635 |
| Msa0483800 | MtrunA17_Chr6g0450601 | 62.339 | 1163 | 418 | 7 | 4 | 1149 | 7 | 1166 | 0.0 | 1516 |
| Msa0483800 | MtrunA17_Chr2g0329991 | 55.076 | 1182 | 483 | 7 | 5 | 1152 | 10 | 1177 | 0.0 | 1341 |
| Msa0483800 | MtrunA17_Chr8g0342811 | 53.547 | 1184 | 499 | 7 | 5 | 1152 | 9 | 1177 | 0.0 | 1310 |
| Msa0483800 | MtrunA17_Chr8g0363911 | 46.050 | 1114 | 577 | 13 | 36 | 1141 | 44 | 1141 | 0.0 | 978 |
| Msa0483800 | MtrunA17_Chr5g0415271 | 45.357 | 1120 | 578 | 14 | 35 | 1141 | 23 | 1121 | 0.0 | 974 |
| Msa0483800 | MtrunA17_Chr7g0244991 | 37.284 | 1156 | 639 | 24 | 28 | 1134 | 135 | 1253 | 0.0 | 697 |
| Msa0483800 | MtrunA17_Chr3g0078371 | 36.568 | 1113 | 647 | 16 | 31 | 1134 | 116 | 1178 | 0.0 | 664 |
| Msa0483800 | MtrunA17_Chr8g0355251 | 36.937 | 1110 | 640 | 22 | 41 | 1134 | 78 | 1143 | 0.0 | 653 |
| Msa0483800 | MtrunA17_Chr2g0324791 | 31.839 | 1093 | 638 | 28 | 45 | 1124 | 8 | 1006 | 1.65e-166 | 522 |
| Msa0483800 | MtrunA17_Chr8g0346461 | 25.084 | 594 | 324 | 20 | 403 | 972 | 347 | 843 | 3.53e-22 | 103 |
| Msa0483800 | MtrunA17_Chr1g0173111 | 28.182 | 220 | 117 | 7 | 554 | 760 | 521 | 712 | 7.69e-14 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483800 | AT1G68710.2 | 73.137 | 1154 | 293 | 6 | 6 | 1148 | 13 | 1160 | 0.0 | 1774 |
| Msa0483800 | AT1G68710.1 | 73.137 | 1154 | 293 | 6 | 6 | 1148 | 13 | 1160 | 0.0 | 1774 |
| Msa0483800 | AT1G68710.3 | 71.525 | 1180 | 293 | 7 | 6 | 1148 | 13 | 1186 | 0.0 | 1761 |
| Msa0483800 | AT1G26130.2 | 71.032 | 1153 | 324 | 5 | 2 | 1148 | 9 | 1157 | 0.0 | 1723 |
| Msa0483800 | AT1G26130.4 | 71.032 | 1153 | 324 | 5 | 2 | 1148 | 9 | 1157 | 0.0 | 1723 |
| Msa0483800 | AT1G26130.3 | 71.032 | 1153 | 324 | 5 | 2 | 1148 | 9 | 1157 | 0.0 | 1723 |
| Msa0483800 | AT1G26130.1 | 71.032 | 1153 | 323 | 6 | 2 | 1148 | 9 | 1156 | 0.0 | 1719 |
| Msa0483800 | AT3G25610.1 | 70.645 | 1148 | 327 | 8 | 6 | 1147 | 11 | 1154 | 0.0 | 1714 |
| Msa0483800 | AT1G13210.1 | 69.757 | 1154 | 338 | 7 | 2 | 1147 | 5 | 1155 | 0.0 | 1679 |
| Msa0483800 | AT3G27870.1 | 63.423 | 1151 | 397 | 8 | 2 | 1138 | 5 | 1145 | 0.0 | 1554 |
| Msa0483800 | AT3G27870.2 | 64.859 | 996 | 326 | 8 | 2 | 983 | 5 | 990 | 0.0 | 1360 |
| Msa0483800 | AT3G27870.3 | 64.033 | 962 | 324 | 6 | 191 | 1138 | 1 | 954 | 0.0 | 1325 |
| Msa0483800 | AT3G13900.1 | 54.206 | 1177 | 483 | 8 | 9 | 1145 | 13 | 1173 | 0.0 | 1321 |
| Msa0483800 | AT1G17500.2 | 54.795 | 1168 | 493 | 7 | 5 | 1152 | 9 | 1161 | 0.0 | 1319 |
| Msa0483800 | AT1G17500.1 | 54.795 | 1168 | 493 | 7 | 5 | 1152 | 9 | 1161 | 0.0 | 1319 |
| Msa0483800 | AT1G72700.1 | 53.774 | 1179 | 500 | 8 | 5 | 1152 | 9 | 1173 | 0.0 | 1309 |
| Msa0483800 | AT1G72700.3 | 53.774 | 1179 | 500 | 8 | 5 | 1152 | 9 | 1173 | 0.0 | 1309 |
| Msa0483800 | AT1G72700.2 | 53.774 | 1179 | 500 | 8 | 5 | 1152 | 9 | 1173 | 0.0 | 1309 |
| Msa0483800 | AT1G54280.2 | 53.486 | 1176 | 495 | 6 | 9 | 1145 | 13 | 1175 | 0.0 | 1303 |
| Msa0483800 | AT1G54280.3 | 53.486 | 1176 | 495 | 6 | 9 | 1145 | 13 | 1175 | 0.0 | 1303 |
| Msa0483800 | AT1G54280.1 | 53.486 | 1176 | 495 | 6 | 9 | 1145 | 13 | 1175 | 0.0 | 1303 |
| Msa0483800 | AT3G13900.2 | 56.080 | 954 | 361 | 9 | 9 | 920 | 13 | 950 | 0.0 | 1078 |
| Msa0483800 | AT3G13900.3 | 55.459 | 916 | 352 | 8 | 9 | 884 | 13 | 912 | 0.0 | 1018 |
| Msa0483800 | AT1G59820.1 | 45.013 | 1113 | 585 | 14 | 36 | 1141 | 36 | 1128 | 0.0 | 959 |
| Msa0483800 | AT5G04930.1 | 36.592 | 1115 | 615 | 25 | 35 | 1124 | 67 | 1114 | 0.0 | 648 |
| Msa0483800 | AT5G44240.2 | 32.472 | 1084 | 623 | 30 | 55 | 1124 | 18 | 1006 | 9.31e-166 | 520 |
| Msa0483800 | AT5G44240.1 | 32.472 | 1084 | 623 | 30 | 55 | 1124 | 50 | 1038 | 4.95e-165 | 520 |
| Msa0483800 | AT4G00900.2 | 24.831 | 592 | 325 | 18 | 403 | 972 | 346 | 839 | 8.85e-22 | 102 |
| Msa0483800 | AT4G00900.1 | 24.831 | 592 | 325 | 18 | 403 | 972 | 346 | 839 | 8.85e-22 | 102 |
| Msa0483800 | AT1G07670.2 | 25.386 | 583 | 310 | 23 | 403 | 966 | 361 | 837 | 1.02e-18 | 92.8 |
| Msa0483800 | AT1G07670.1 | 25.386 | 583 | 310 | 23 | 403 | 966 | 361 | 837 | 1.02e-18 | 92.8 |
| Msa0483800 | AT3G18700.1 | 54.667 | 75 | 29 | 3 | 936 | 1007 | 5 | 77 | 2.42e-13 | 70.1 |
| Msa0483800 | AT1G07810.1 | 26.629 | 353 | 192 | 14 | 403 | 736 | 361 | 665 | 5.69e-11 | 67.8 |
Find 242 sgRNAs with CRISPR-Local
Find 419 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTAATGCTTGAATTTC+AGG | 0.092546 | 3_4:+559613 | None:intergenic |
| TCAAAACTAATTTATTTATT+TGG | 0.107111 | 3_4:+556501 | None:intergenic |
| TTCAAACTCCCTTCCATTAA+TGG | 0.130822 | 3_4:+560205 | None:intergenic |
| AAGATTATCTACTTCTTATT+TGG | 0.153322 | 3_4:-561428 | Msa0483800:CDS |
| ATGGAGTTGGATCCGGTTTC+TGG | 0.155446 | 3_4:-560645 | Msa0483800:CDS |
| CGCTTCCTGCCATTGCCCTT+GGG | 0.198332 | 3_4:-558077 | Msa0483800:CDS |
| GTCTAAGGTGGGGTAGGTTT+TGG | 0.206214 | 3_4:-563455 | Msa0483800:five_prime_UTR |
| TTTGGGGTTCTATTGCTATT+TGG | 0.221327 | 3_4:-556962 | Msa0483800:CDS |
| TATTTATTCGTGTTTGCTTA+TGG | 0.221522 | 3_4:-556939 | Msa0483800:CDS |
| GGTACAACATGTTGCCATTT+GGG | 0.235702 | 3_4:-556979 | Msa0483800:CDS |
| CAGAAAGGATTGTGTCAATT+TGG | 0.237613 | 3_4:+561075 | None:intergenic |
| TTTATTGGATCTATTCTCTT+TGG | 0.253050 | 3_4:-561386 | Msa0483800:CDS |
| TTGCTCCATCGGCTTCCTTT+TGG | 0.253515 | 3_4:-556863 | Msa0483800:CDS |
| TTTGAAAGGCTTGCCATTAA+TGG | 0.262915 | 3_4:-560218 | Msa0483800:CDS |
| CACAAGCTAGAATTAAGATA+TGG | 0.263078 | 3_4:-559831 | Msa0483800:CDS |
| AAATATTGAAAAGAAATAAA+AGG | 0.263398 | 3_4:+563621 | None:intergenic |
| TTGGAAGACAAGGGTATTCT+AGG | 0.272681 | 3_4:-563250 | Msa0483800:CDS |
| ACTCAAGTAACAAAATTTAT+AGG | 0.273019 | 3_4:+563547 | None:intergenic |
| TTCATCAAATGTTCGGTTGC+TGG | 0.279773 | 3_4:-561017 | Msa0483800:CDS |
| TACATGGACATTGGTGTTAC+AGG | 0.280817 | 3_4:-558597 | Msa0483800:CDS |
| AGTCATTGTTTGAGCAGTTT+AGG | 0.281595 | 3_4:-563121 | Msa0483800:CDS |
| GAATTCGGCGCCACCTAAAT+AGG | 0.284721 | 3_4:+557192 | None:intergenic |
| AACTGGAATCAATTGATATC+AGG | 0.289431 | 3_4:-560938 | Msa0483800:CDS |
| AATTGCACAATTCCGGTATC+TGG | 0.297086 | 3_4:-558635 | Msa0483800:CDS |
| TGCTACTTTCACTTTGATTC+CGG | 0.308090 | 3_4:-563867 | Msa0483800:five_prime_UTR |
| TTCGGAGCAGTCATCTTTAC+TGG | 0.309047 | 3_4:-561524 | Msa0483800:CDS |
| CCATGTATACTTGTGTCGTT+TGG | 0.311621 | 3_4:-557046 | Msa0483800:CDS |
| TCGCTTCCTGCCATTGCCCT+TGG | 0.312300 | 3_4:-558078 | Msa0483800:CDS |
| AATTTCTATTTCCTTGTTGC+TGG | 0.314481 | 3_4:-563089 | Msa0483800:CDS |
| GATTAATGAATATGCTTTGA+AGG | 0.316781 | 3_4:+561174 | None:intergenic |
| AAAGAATAATGAACGGAAAC+TGG | 0.319383 | 3_4:-560866 | Msa0483800:CDS |
| GGACATTCTGTACACCTTCT+TGG | 0.324279 | 3_4:+557213 | None:intergenic |
| GCAGAAGAAGAAAATTATTA+TGG | 0.331068 | 3_4:+557139 | None:intergenic |
| GGTACAATGGATGAGGTATA+AGG | 0.331412 | 3_4:-556748 | Msa0483800:CDS |
| GTAGAAGACAAGCTCCAAAA+TGG | 0.334486 | 3_4:-559972 | Msa0483800:CDS |
| GTACAAATAACACAACAATT+TGG | 0.334815 | 3_4:-563829 | Msa0483800:five_prime_UTR |
| CTTGTATTTCTCAATAGAAT+TGG | 0.336216 | 3_4:-561204 | Msa0483800:CDS |
| CCTGTTTCCTCGTCCACTTC+CGG | 0.343161 | 3_4:+560774 | None:intergenic |
| CGTAATACAGACTTCATATT+CGG | 0.344767 | 3_4:-561542 | Msa0483800:CDS |
| AAAGAGTACAAATTTGCATT+TGG | 0.346977 | 3_4:+561641 | None:intergenic |
| TTTGAAGCTAAAACAAGGTT+TGG | 0.350750 | 3_4:-561732 | Msa0483800:CDS |
| GTGTACAGAATGTCCTATTT+AGG | 0.351914 | 3_4:-557205 | Msa0483800:CDS |
| GAAGAAGTTGTATAGCATTA+AGG | 0.356254 | 3_4:+561238 | None:intergenic |
| ACAATCCTTTCTGATAAAAC+TGG | 0.357068 | 3_4:-561065 | Msa0483800:CDS |
| CGTTCTCGTCAAAGGCTTGA+AGG | 0.358215 | 3_4:+557102 | None:intergenic |
| TCGGTTGCTGGGGTAGCTTA+TGG | 0.358460 | 3_4:-561005 | Msa0483800:CDS |
| CAACAAGATAGATTTGAATC+AGG | 0.359396 | 3_4:-563209 | Msa0483800:CDS |
| GAATGCTCTCTCTTAAACTT+TGG | 0.359897 | 3_4:+563278 | None:intergenic |
| CTTCCTTTAGCTGTTATAGT+TGG | 0.363690 | 3_4:-563017 | Msa0483800:CDS |
| GCAGACTGCATCTTCGTAAC+TGG | 0.363861 | 3_4:+561790 | None:intergenic |
| TCACAAAAGTTAGTAGTTGT+TGG | 0.368870 | 3_4:+556649 | None:intergenic |
| TGACAGCAGCTTTGAAATCA+TGG | 0.368958 | 3_4:+561675 | None:intergenic |
| TGGTACAACATGTTGCCATT+TGG | 0.369553 | 3_4:-556980 | Msa0483800:CDS |
| ATATTGCAATTGCACAATTC+CGG | 0.375437 | 3_4:-558642 | Msa0483800:CDS |
| CTTTGATTCCGGCAATTTGT+AGG | 0.379016 | 3_4:-563856 | Msa0483800:five_prime_UTR |
| ATAGCACTAACAGCAGTATA+AGG | 0.380016 | 3_4:+563041 | None:intergenic |
| TTCTAAGTTGGATGCTCAAC+GGG | 0.380465 | 3_4:-557172 | Msa0483800:CDS |
| TTCTACAAGAATATTACATT+TGG | 0.389391 | 3_4:-558195 | Msa0483800:CDS |
| TTCTTCTGCACTAAAGCAAT+AGG | 0.389424 | 3_4:-557125 | Msa0483800:CDS |
| CGCTGAGACTCTTGCTCCAT+CGG | 0.392380 | 3_4:-556874 | Msa0483800:CDS |
| ATAAAATTAAAACCTTTGAT+TGG | 0.392819 | 3_4:+560894 | None:intergenic |
| TGAGCATCCAACTTAGAATT+CGG | 0.402885 | 3_4:+557177 | None:intergenic |
| CATACCAGAGCCTTCTGCTT+TGG | 0.404281 | 3_4:+559221 | None:intergenic |
| TTCATTCAAGTTTGAAGTAC+GGG | 0.405582 | 3_4:+561106 | None:intergenic |
| ATCACAAATGCTGCTTCATC+AGG | 0.408000 | 3_4:+560726 | None:intergenic |
| AACTTTGACTTGCAACTCAA+TGG | 0.412940 | 3_4:-561042 | Msa0483800:CDS |
| CAAAGGTTTCTAGTTGAGAA+TGG | 0.413700 | 3_4:-556589 | Msa0483800:three_prime_UTR |
| TCAACCTCATTGCCAGAAAC+CGG | 0.415131 | 3_4:+560633 | None:intergenic |
| CCGGAAGTGGACGAGGAAAC+AGG | 0.415407 | 3_4:-560774 | Msa0483800:CDS |
| TATGACAAACAGACAATAAA+CGG | 0.417642 | 3_4:+560805 | None:intergenic |
| AAAGAGAATAGATCCAATAA+AGG | 0.418393 | 3_4:+561388 | None:intergenic |
| TCATCAAATGTTCGGTTGCT+GGG | 0.418614 | 3_4:-561016 | Msa0483800:CDS |
| AATATTATACCCAATGTTGA+TGG | 0.420341 | 3_4:+559780 | None:intergenic |
| AAGAAAATGGTGGAATCATC+TGG | 0.425560 | 3_4:+561308 | None:intergenic |
| ATCAATGATGGAGTTGGATC+CGG | 0.426178 | 3_4:-560652 | Msa0483800:CDS |
| TTTCACTCTATTCTTATATG+AGG | 0.431318 | 3_4:-558172 | Msa0483800:CDS |
| ACAAGCTAGAATTAAGATAT+GGG | 0.433537 | 3_4:-559830 | Msa0483800:CDS |
| AAACTGCTTTCTGCATCTAA+AGG | 0.437114 | 3_4:-559374 | Msa0483800:CDS |
| CTCATAAAAGGTTACTAGAT+TGG | 0.437606 | 3_4:-558905 | Msa0483800:intron |
| TAGAAGACAAGCTCCAAAAT+GGG | 0.438213 | 3_4:-559971 | Msa0483800:CDS |
| AGAAGAGTTATATGTCATAA+AGG | 0.439780 | 3_4:-561917 | Msa0483800:CDS |
| AAGAGAGAGCATTCACAGAT+TGG | 0.439786 | 3_4:-563269 | Msa0483800:CDS |
| ATTATGCTGATAATTCTGTT+AGG | 0.442793 | 3_4:-563178 | Msa0483800:CDS |
| CATTGGTAGTAGGTCGGAAC+TGG | 0.447064 | 3_4:-560955 | Msa0483800:CDS |
| CATGTATACTTGTGTCGTTT+GGG | 0.447842 | 3_4:-557045 | Msa0483800:CDS |
| AACTGCTTTCTGCATCTAAA+GGG | 0.455917 | 3_4:-559373 | Msa0483800:CDS |
| CATGCAGTGTCATGTTTGAA+AGG | 0.455976 | 3_4:-560232 | Msa0483800:intron |
| TAATATGTACTATGAAGAAC+TGG | 0.459205 | 3_4:-561144 | Msa0483800:CDS |
| AATGGAGTTCATCAAATGTT+CGG | 0.463379 | 3_4:-561024 | Msa0483800:CDS |
| CTCTCCTCCCTAGGCCGTCA+TGG | 0.464414 | 3_4:-558671 | Msa0483800:intron |
| GCAGTTGTTGAAAAGCTTGA+AGG | 0.465063 | 3_4:+556909 | None:intergenic |
| TGTTATAGTTGGTGCAACTA+TGG | 0.466414 | 3_4:-563006 | Msa0483800:CDS |
| AGAAGCTGCTGAGGAGAAAG+TGG | 0.468812 | 3_4:+561584 | None:intergenic |
| TCAGAACAGTTTATCAATGA+TGG | 0.468858 | 3_4:-560664 | Msa0483800:CDS |
| GAGAGGAATCTAATCCTTCT+CGG | 0.469754 | 3_4:-560005 | Msa0483800:CDS |
| ACACCTTCTTGGTACAAGAT+AGG | 0.470513 | 3_4:+557224 | None:intergenic |
| AAAGGTTTCTAGTTGAGAAT+GGG | 0.471062 | 3_4:-556588 | Msa0483800:three_prime_UTR |
| AGTAACTTCTTCATTAAATG+AGG | 0.471404 | 3_4:-561708 | Msa0483800:CDS |
| ATTAGTTCTGCAGGATATTG+AGG | 0.471702 | 3_4:-561948 | Msa0483800:intron |
| GAAAGCAGTAATAGGTCGGC+AGG | 0.473145 | 3_4:+561815 | None:intergenic |
| GAGGTGTATGCATCATTCTC+TGG | 0.475622 | 3_4:-558153 | Msa0483800:CDS |
| AACTGGACGAAAGCAGTAAT+AGG | 0.476044 | 3_4:+561807 | None:intergenic |
| TCATACTGCCATGCCGGAAG+TGG | 0.477207 | 3_4:-560787 | Msa0483800:CDS |
| CTTCATTCAAGTTTGAAGTA+CGG | 0.477834 | 3_4:+561105 | None:intergenic |
| CTACGTTGAAACGATGAACT+TGG | 0.481235 | 3_4:-561768 | Msa0483800:CDS |
| TGCTCTGTAAAGGCGCTGAC+AGG | 0.482856 | 3_4:-560341 | Msa0483800:intron |
| GTACAATGGATGAGGTATAA+GGG | 0.483970 | 3_4:-556747 | Msa0483800:CDS |
| GAAGTAATCTTTCCAGATAC+CGG | 0.489297 | 3_4:+558623 | None:intergenic |
| TGGAGACTGCCATCAACATT+GGG | 0.499022 | 3_4:-559789 | Msa0483800:intron |
| AATATTGAAAAGAAATAAAA+GGG | 0.501003 | 3_4:+563622 | None:intergenic |
| ATGGAGACTGCCATCAACAT+TGG | 0.501775 | 3_4:-559790 | Msa0483800:CDS |
| TGTTTCCTATGCATCATGAA+AGG | 0.506304 | 3_4:-556770 | Msa0483800:CDS |
| TGCCATGCCGGAAGTGGACG+AGG | 0.510510 | 3_4:-560781 | Msa0483800:CDS |
| ATCGCCAAAGCAGAAGGCTC+TGG | 0.513485 | 3_4:-559225 | Msa0483800:intron |
| GGTGGCGCCGAATTCTAAGT+TGG | 0.514230 | 3_4:-557184 | Msa0483800:CDS |
| TTCCTCGTCCACTTCCGGCA+TGG | 0.515006 | 3_4:+560779 | None:intergenic |
| GAGCTTGTCTTCTACAGCAG+TGG | 0.515492 | 3_4:+559980 | None:intergenic |
| CTATGAAGAACTGGACAAAC+CGG | 0.515910 | 3_4:-561135 | Msa0483800:CDS |
| GCTTCCTGCCATTGCCCTTG+GGG | 0.517141 | 3_4:-558076 | Msa0483800:CDS |
| GTTTCCTATGCATCATGAAA+GGG | 0.517453 | 3_4:-556769 | Msa0483800:CDS |
| CATTGTTTGAGCAGTTTAGG+AGG | 0.518268 | 3_4:-563118 | Msa0483800:CDS |
| GTTACTAGATTGGTCAAAGA+AGG | 0.518896 | 3_4:-558895 | Msa0483800:CDS |
| TATTGAGAAATACAAGGAGA+TGG | 0.520310 | 3_4:+561211 | None:intergenic |
| GCACCAACTATAACAGCTAA+AGG | 0.520410 | 3_4:+563014 | None:intergenic |
| GCTGGGGTAGCTTATGGCCG+TGG | 0.520696 | 3_4:-560999 | Msa0483800:CDS |
| CAGTTTATCAATGATGGAGT+TGG | 0.523883 | 3_4:-560658 | Msa0483800:CDS |
| GAGCAAAATCGAGATGAAGA+TGG | 0.524645 | 3_4:-561453 | Msa0483800:CDS |
| AACTAATGATATCTAGAAGA+AGG | 0.526497 | 3_4:+563723 | None:intergenic |
| CAAGAAGCTGATGTAGGTGT+TGG | 0.531998 | 3_4:-558817 | Msa0483800:CDS |
| TGCAATATCACTAGCCATGA+CGG | 0.534715 | 3_4:+558657 | None:intergenic |
| TCTCGGAGAAGAAGCTGCTG+AGG | 0.535606 | 3_4:+561575 | None:intergenic |
| ACAACATTAGCCATCGGTGA+TGG | 0.535671 | 3_4:-558862 | Msa0483800:CDS |
| GTCACTTGTTTATGCTCTAG+AGG | 0.536426 | 3_4:-559312 | Msa0483800:CDS |
| GAAGGATGGAGGAGACAAGA+TGG | 0.538054 | 3_4:-559593 | Msa0483800:CDS |
| CCAAACGACACAAGTATACA+TGG | 0.538726 | 3_4:+557046 | None:intergenic |
| CAGTGGTGTTGAAGGAATGC+AGG | 0.539214 | 3_4:-558791 | Msa0483800:intron |
| AGTACCTAGCAGATACATCT+TGG | 0.539728 | 3_4:+558046 | None:intergenic |
| TTTCCTATCTTGTACCAAGA+AGG | 0.539909 | 3_4:-557227 | Msa0483800:CDS |
| ACAACGGAATTATGAAAAGA+TGG | 0.539970 | 3_4:-561340 | Msa0483800:CDS |
| TTTGAAGTACGGGCAAGAGC+CGG | 0.543120 | 3_4:+561116 | None:intergenic |
| CTTCAAGCCTTTGACGAGAA+CGG | 0.543588 | 3_4:-557101 | Msa0483800:CDS |
| GTCAAAGACCCCAAGGGCAA+TGG | 0.544360 | 3_4:+558068 | None:intergenic |
| AATAGCAATAGAACCCCAAA+TGG | 0.546308 | 3_4:+556965 | None:intergenic |
| AAAGGCTTGCCATTAATGGA+AGG | 0.548014 | 3_4:-560214 | Msa0483800:CDS |
| TGTACCCTTTCATGATGCAT+AGG | 0.548249 | 3_4:+556765 | None:intergenic |
| TTTGAATGATCTTACCATTG+TGG | 0.549643 | 3_4:+558567 | None:intergenic |
| AATCAATGATTCATGATCCA+TGG | 0.550551 | 3_4:+560049 | None:intergenic |
| GTACAACATGTTGCCATTTG+GGG | 0.550990 | 3_4:-556978 | Msa0483800:CDS |
| GTTATATGTCATAAAGGTGG+TGG | 0.551348 | 3_4:-561911 | Msa0483800:CDS |
| GTTGGAATCAGTGGTGTTGA+AGG | 0.551752 | 3_4:-558799 | Msa0483800:CDS |
| TACTTCTTGTACATGGACAT+TGG | 0.552282 | 3_4:-558606 | Msa0483800:CDS |
| TTCTTCATCAAGTTCACGAT+AGG | 0.552409 | 3_4:+560121 | None:intergenic |
| GGATCATGAATCATTGATTG+AGG | 0.552625 | 3_4:-560045 | Msa0483800:CDS |
| ACAGAGGTTGAGCAAGCCAT+TGG | 0.552734 | 3_4:-560972 | Msa0483800:CDS |
| AAATAATGTGAGAATCCAAA+AGG | 0.553021 | 3_4:+556848 | None:intergenic |
| TTTCTGGCAATGAGGTTGAA+AGG | 0.557011 | 3_4:-560629 | Msa0483800:intron |
| TGGAAGACAAGGGTATTCTA+GGG | 0.557902 | 3_4:-563249 | Msa0483800:CDS |
| AACTGCTCAAACAATGACTT+AGG | 0.558931 | 3_4:+563125 | None:intergenic |
| ACTGGAATCAATTGATATCA+GGG | 0.559607 | 3_4:-560937 | Msa0483800:CDS |
| GAAAGATTACTTCTTGTACA+TGG | 0.560318 | 3_4:-558613 | Msa0483800:CDS |
| TTTAGGATCAAAGAAAATGG+TGG | 0.560736 | 3_4:+561298 | None:intergenic |
| GACAGCCTGCATACAATGAC+TGG | 0.560825 | 3_4:-558131 | Msa0483800:CDS |
| TCGCTCATCGCCAAAGCAGA+AGG | 0.562440 | 3_4:-559231 | Msa0483800:CDS |
| TCTTGTCGCTTGCTTCGACA+AGG | 0.562978 | 3_4:-559667 | Msa0483800:CDS |
| ATCGTGGAGCACGAAAAGTA+TGG | 0.564066 | 3_4:+556804 | None:intergenic |
| ATTGAGAAATACAAGGAGAT+GGG | 0.564117 | 3_4:+561212 | None:intergenic |
| AAGACCCCAAGGGCAATGGC+AGG | 0.565148 | 3_4:+558072 | None:intergenic |
| AAATATAGTGAAGATAAAGA+AGG | 0.572990 | 3_4:-561849 | Msa0483800:CDS |
| CAGTTCCGACCTACTACCAA+TGG | 0.573787 | 3_4:+560956 | None:intergenic |
| AGATTGGTCAAAGAAGGAAC+TGG | 0.574066 | 3_4:-558889 | Msa0483800:CDS |
| ATTCTAAGTTGGATGCTCAA+CGG | 0.574175 | 3_4:-557173 | Msa0483800:CDS |
| CATTCACAGATTGGAAGACA+AGG | 0.574518 | 3_4:-563260 | Msa0483800:CDS |
| GTGATAGTTAAAGATGAAGA+CGG | 0.574581 | 3_4:-560375 | Msa0483800:CDS |
| TTGAGCAAGCCATTGGTAGT+AGG | 0.576117 | 3_4:-560965 | Msa0483800:CDS |
| ATGAAAGGGTACAATGGATG+AGG | 0.576394 | 3_4:-556755 | Msa0483800:CDS |
| CAATTCTATTGAGAAATACA+AGG | 0.576444 | 3_4:+561205 | None:intergenic |
| CTACAGCAGTGGCACCGAGA+AGG | 0.578850 | 3_4:+559991 | None:intergenic |
| AAATATCAGAAAAGATTGAG+AGG | 0.579299 | 3_4:-560022 | Msa0483800:CDS |
| TGATAGTTAAAGATGAAGAC+GGG | 0.581808 | 3_4:-560374 | Msa0483800:CDS |
| ATTCAAGCATTAGAGAAGGA+TGG | 0.585019 | 3_4:-559607 | Msa0483800:CDS |
| GCATTTGCTCTGATAATCGA+TGG | 0.585989 | 3_4:-559338 | Msa0483800:CDS |
| GTGTATCTTCAGATATCTGA+AGG | 0.586350 | 3_4:-559401 | Msa0483800:CDS |
| CGTGCTCCACGATTAAAATG+TGG | 0.587780 | 3_4:-556794 | Msa0483800:CDS |
| ATGCTTCAAGAAGCTGATGT+AGG | 0.588681 | 3_4:-558823 | Msa0483800:CDS |
| ACCGCTGGAAAAGACATACT+AGG | 0.589669 | 3_4:-557074 | Msa0483800:CDS |
| GTGATTGCTGCAAGAGAAGT+GGG | 0.590048 | 3_4:-560708 | Msa0483800:CDS |
| ACTAAACGTGACTTGAACAA+CGG | 0.595592 | 3_4:-561356 | Msa0483800:CDS |
| TTGGGTTGTAAACCTACAGA+TGG | 0.595777 | 3_4:-557027 | Msa0483800:CDS |
| GATCGAAAAGAACCAATCAA+AGG | 0.596365 | 3_4:-560906 | Msa0483800:CDS |
| GTGAGTGAATATGCTGATGC+AGG | 0.598689 | 3_4:-560164 | Msa0483800:CDS |
| AGTTGGTGCAACTATGGTGA+AGG | 0.600945 | 3_4:-563000 | Msa0483800:CDS |
| TGAAATTCAAGCATTAGAGA+AGG | 0.601663 | 3_4:-559611 | Msa0483800:CDS |
| ATTGTTTGAGCAGTTTAGGA+GGG | 0.602269 | 3_4:-563117 | Msa0483800:CDS |
| CATCAAATGTTCGGTTGCTG+GGG | 0.604157 | 3_4:-561015 | Msa0483800:CDS |
| ATCTGCTAGGTACTGCGTCA+AGG | 0.606063 | 3_4:-558037 | Msa0483800:intron |
| ATAGATGAAAGAATAATGAA+CGG | 0.608033 | 3_4:-560873 | Msa0483800:CDS |
| AGAATCCAAAAGGAAGCCGA+TGG | 0.608817 | 3_4:+556858 | None:intergenic |
| AAGGCTTGCCATTAATGGAA+GGG | 0.610755 | 3_4:-560213 | Msa0483800:CDS |
| GCACAGCGAGCGCCATCTGT+AGG | 0.610848 | 3_4:+557015 | None:intergenic |
| GTCATTAGCTCCATCACCGA+TGG | 0.611715 | 3_4:+558852 | None:intergenic |
| TTGACCAAGATGTATCTGCT+AGG | 0.614128 | 3_4:-558050 | Msa0483800:CDS |
| TGCATCATGAAAGGGTACAA+TGG | 0.615628 | 3_4:-556761 | Msa0483800:CDS |
| AGAGTTATATGTCATAAAGG+TGG | 0.616344 | 3_4:-561914 | Msa0483800:CDS |
| TGTGATTGCTGCAAGAGAAG+TGG | 0.617623 | 3_4:-560709 | Msa0483800:CDS |
| CGGTGATGGAGCTAATGACG+TGG | 0.621362 | 3_4:-558848 | Msa0483800:CDS |
| GAGTGGAAGAATCTCAAGGT+AGG | 0.622591 | 3_4:-561872 | Msa0483800:CDS |
| ACAAATTTGAAGCTAAAACA+AGG | 0.623681 | 3_4:-561737 | Msa0483800:CDS |
| TACAGAATGTCCTATTTAGG+TGG | 0.628770 | 3_4:-557202 | Msa0483800:CDS |
| AGACAAGATGGCTATCATGA+AGG | 0.630297 | 3_4:-559581 | Msa0483800:intron |
| ATGTAAAGGAAGTATAACAA+AGG | 0.632841 | 3_4:-556606 | Msa0483800:three_prime_UTR |
| GGACGAAAGCAGTAATAGGT+CGG | 0.635029 | 3_4:+561811 | None:intergenic |
| TGTTTGTCATACTGCCATGC+CGG | 0.635666 | 3_4:-560793 | Msa0483800:CDS |
| GATTCTCACATTATTTGTCG+CGG | 0.636103 | 3_4:-556841 | Msa0483800:CDS |
| CGCTGTGCGATACTTCACCT+TGG | 0.640777 | 3_4:-557000 | Msa0483800:CDS |
| GATGTAGGTGTTGGAATCAG+TGG | 0.648525 | 3_4:-558808 | Msa0483800:CDS |
| GCAAGCCATTGGTAGTAGGT+CGG | 0.650019 | 3_4:-560961 | Msa0483800:CDS |
| AAGCTAAGATACCAGCAACA+AGG | 0.652050 | 3_4:+563078 | None:intergenic |
| TACGGAGTGGAAGAATCTCA+AGG | 0.656618 | 3_4:-561876 | Msa0483800:CDS |
| AGCGAAAATTACAGTCACCA+TGG | 0.656927 | 3_4:-560066 | Msa0483800:CDS |
| CATCTTGGTCAAAGACCCCA+AGG | 0.658958 | 3_4:+558061 | None:intergenic |
| CAAGCATTAGAGAAGGATGG+AGG | 0.659207 | 3_4:-559604 | Msa0483800:CDS |
| TCAAACTTGAATGAAGAACT+CGG | 0.661344 | 3_4:-561098 | Msa0483800:CDS |
| GGATCCGGTTTCTGGCAATG+AGG | 0.662297 | 3_4:-560637 | Msa0483800:CDS |
| GTTGAAACGATGAACTTGGA+TGG | 0.664384 | 3_4:-561764 | Msa0483800:CDS |
| GGTAAAACAACATTAGCCAT+CGG | 0.664569 | 3_4:-558868 | Msa0483800:CDS |
| CAGAGCAAATGCTTGCTGAG+AGG | 0.665647 | 3_4:+559349 | None:intergenic |
| AGAAGACAAGCTCCAAAATG+GGG | 0.671624 | 3_4:-559970 | Msa0483800:intron |
| CTTTACTGGTCACGACACGA+AGG | 0.680986 | 3_4:-561510 | Msa0483800:CDS |
| GGTGAAGAAAAGTAGAAACA+TGG | 0.686340 | 3_4:+563750 | None:intergenic |
| ATGGACATTGGTGTTACAGG+AGG | 0.686829 | 3_4:-558594 | Msa0483800:CDS |
| AAAGCAGTAATAGGTCGGCA+GGG | 0.688009 | 3_4:+561816 | None:intergenic |
| GGTGATGGAGCTAATGACGT+GGG | 0.688269 | 3_4:-558847 | Msa0483800:CDS |
| TAGGGAAGATAAAATCTCAG+TGG | 0.690156 | 3_4:-563395 | Msa0483800:five_prime_UTR |
| TGATATCTAGAAGAAGGACG+CGG | 0.694317 | 3_4:+563729 | None:intergenic |
| GGTGCAACTATGGTGAAGGA+AGG | 0.698242 | 3_4:-562996 | Msa0483800:CDS |
| AATGGCAACATGTTGTACCA+AGG | 0.698501 | 3_4:+556983 | None:intergenic |
| TTCTGTATAACATCTGCACG+AGG | 0.698773 | 3_4:+560834 | None:intergenic |
| GCTCAACCTCTGTGACACCA+CGG | 0.705887 | 3_4:+560982 | None:intergenic |
| ATTCACAGATTGGAAGACAA+GGG | 0.715792 | 3_4:-563259 | Msa0483800:CDS |
| TTACAGGAGGATGTCCACAA+TGG | 0.740764 | 3_4:-558581 | Msa0483800:intron |
| ATCTTGGTCAAAGACCCCAA+GGG | 0.742412 | 3_4:+558062 | None:intergenic |
| TTATGGCCGTGGTGTCACAG+AGG | 0.763255 | 3_4:-560988 | Msa0483800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTGAAAAGAAATAAAA+GGG | + | chr3_4:556665-556684 | None:intergenic | 10.0% |
| !! | AAATATTGAAAAGAAATAAA+AGG | + | chr3_4:556666-556685 | None:intergenic | 10.0% |
| !! | AAAAAATATTTGACAAAAAA+GGG | + | chr3_4:556916-556935 | None:intergenic | 10.0% |
| !!! | GATTTTTTTCAAATTATTAA+TGG | - | chr3_4:557835-557854 | Msa0483800:intron | 10.0% |
| !! | AATTAAAATAGTTTAAATGA+AGG | + | chr3_4:561181-561200 | None:intergenic | 10.0% |
| !! | ATTGAGTAAAAAATAAAAAT+TGG | + | chr3_4:561205-561224 | None:intergenic | 10.0% |
| !!! | AAACAAAACATTTTATAAAA+CGG | + | chr3_4:561585-561604 | None:intergenic | 10.0% |
| !!! | TAATATTTTGTTTATTCTTT+TGG | - | chr3_4:562051-562070 | Msa0483800:intron | 10.0% |
| !! | AAAATTAAACAAAAATATCA+TGG | + | chr3_4:563033-563052 | None:intergenic | 10.0% |
| !! | TCAAAACTAATTTATTTATT+TGG | + | chr3_4:563786-563805 | None:intergenic | 10.0% |
| !! | AAAAATATTTGACAAAAAAG+GGG | + | chr3_4:556915-556934 | None:intergenic | 15.0% |
| !! | CAAAAAATATTTGACAAAAA+AGG | + | chr3_4:556917-556936 | None:intergenic | 15.0% |
| !!! | CTTTTTTGTCAAATATTTTT+TGG | - | chr3_4:556915-556934 | Msa0483800:CDS | 15.0% |
| !! | ATAAAATTAAAACCTTTGAT+TGG | + | chr3_4:559393-559412 | None:intergenic | 15.0% |
| !!! | ATAAAATAAATTTTGATGCA+TGG | + | chr3_4:559778-559797 | None:intergenic | 15.0% |
| !! | TTTATTCATGTTAAATAATG+CGG | - | chr3_4:559793-559812 | Msa0483800:CDS | 15.0% |
| !! | TAGCAAAAAAAAATATAGTT+AGG | + | chr3_4:560407-560426 | None:intergenic | 15.0% |
| !!! | TAACTATATTTTTTTTTGCT+AGG | - | chr3_4:560406-560425 | Msa0483800:CDS | 15.0% |
| !! | AACAAAAATAAGGAAAAATA+AGG | + | chr3_4:561131-561150 | None:intergenic | 15.0% |
| !!! | TTATTTTTCCTTATTTTTGT+TGG | - | chr3_4:561130-561149 | Msa0483800:CDS | 15.0% |
| !! | TAAACTATAAATGATATAAC+TGG | - | chr3_4:561268-561287 | Msa0483800:CDS | 15.0% |
| !!! | GCTTTTTGAATAAATTTTAT+TGG | - | chr3_4:561351-561370 | Msa0483800:CDS | 15.0% |
| !! | AATAAAATGAAAACAACTTA+TGG | + | chr3_4:561862-561881 | None:intergenic | 15.0% |
| !!! | TATTATGAAGAAAACTTTTT+AGG | - | chr3_4:562751-562770 | Msa0483800:intron | 15.0% |
| !!! | ATTATGAAGAAAACTTTTTA+GGG | - | chr3_4:562752-562771 | Msa0483800:intron | 15.0% |
| !!! | ATAATTTTCATATTCCTTTC+AGG | - | chr3_4:556496-556515 | Msa0483800:three_prime_UTR | 20.0% |
| !!! | TAATTTTCATATTCCTTTCA+GGG | - | chr3_4:556497-556516 | Msa0483800:three_prime_UTR | 20.0% |
| !! | AATCTCAATAAAAATCCAAA+GGG | + | chr3_4:556715-556734 | None:intergenic | 20.0% |
| !! | AAATCTCAATAAAAATCCAA+AGG | + | chr3_4:556716-556735 | None:intergenic | 20.0% |
| !! | ACTCAAGTAACAAAATTTAT+AGG | + | chr3_4:556740-556759 | None:intergenic | 20.0% |
| !!! | AAATTTGTCTGATAGTTTTA+GGG | - | chr3_4:556871-556890 | Msa0483800:CDS | 20.0% |
| !! | ATACAAGAGTCATAAATATA+AGG | - | chr3_4:558152-558171 | Msa0483800:CDS | 20.0% |
| !! | GTAAATAGAGTAATTACATT+CGG | + | chr3_4:558221-558240 | None:intergenic | 20.0% |
| !! | AAATATAGTGAAGATAAAGA+AGG | - | chr3_4:558435-558454 | Msa0483800:intron | 20.0% |
| !! | AAGATTATCTACTTCTTATT+TGG | - | chr3_4:558856-558875 | Msa0483800:CDS | 20.0% |
| !!! | TTGTTTTTAATTGCCTTTAT+TGG | - | chr3_4:558883-558902 | Msa0483800:CDS | 20.0% |
| !! | ATAGATGAAAGAATAATGAA+CGG | - | chr3_4:559411-559430 | Msa0483800:CDS | 20.0% |
| !!! | AGTAACTAATTTCATTTTGT+AGG | - | chr3_4:559832-559851 | Msa0483800:CDS | 20.0% |
| !!! | TTTTAGAATTCAATAGTTCA+AGG | - | chr3_4:559874-559893 | Msa0483800:intron | 20.0% |
| !! | GAAGATTAATATTTATCAGT+TGG | - | chr3_4:560362-560381 | Msa0483800:CDS | 20.0% |
| !!! | TATGCATTTTCATTTTACAA+TGG | - | chr3_4:560537-560556 | Msa0483800:intron | 20.0% |
| !!! | CATGAAGGTAAATAAATTTT+AGG | - | chr3_4:560718-560737 | Msa0483800:CDS | 20.0% |
| !!! | AAATTTTTACTTGTGCTATT+TGG | + | chr3_4:560813-560832 | None:intergenic | 20.0% |
| !! | ATCTCAACATTCAATATATT+TGG | - | chr3_4:561744-561763 | Msa0483800:CDS | 20.0% |
| !! | TCTCAACATTCAATATATTT+GGG | - | chr3_4:561745-561764 | Msa0483800:CDS | 20.0% |
| !! | AAAGTCACAAATTTCATTTA+AGG | + | chr3_4:561926-561945 | None:intergenic | 20.0% |
| !! | TAAATATGTTTATCCAATCA+AGG | - | chr3_4:562008-562027 | Msa0483800:intron | 20.0% |
| !! | TTCTACAAGAATATTACATT+TGG | - | chr3_4:562089-562108 | Msa0483800:intron | 20.0% |
| !!! | TTATTTTTCCAAATTCTTAC+CGG | + | chr3_4:562375-562394 | None:intergenic | 20.0% |
| !! | TTAGAGAAAATGTAAATGTT+TGG | + | chr3_4:562914-562933 | None:intergenic | 20.0% |
| !!! | TTTGACATTTTAGAATGTAA+AGG | - | chr3_4:563664-563683 | Msa0483800:five_prime_UTR | 20.0% |
| ! | GTACAAATAACACAACAATT+TGG | - | chr3_4:556455-556474 | Msa0483800:three_prime_UTR | 25.0% |
| ! | AACTAATGATATCTAGAAGA+AGG | + | chr3_4:556564-556583 | None:intergenic | 25.0% |
| !! | CTTCTTTAAAAAATACCCTT+TGG | - | chr3_4:556697-556716 | Msa0483800:three_prime_UTR | 25.0% |
| !!! | ATTTTGTTACTTGAGTTCAA+AGG | - | chr3_4:556744-556763 | Msa0483800:CDS | 25.0% |
| !!! | TTTTGTTACTTGAGTTCAAA+GGG | - | chr3_4:556745-556764 | Msa0483800:CDS | 25.0% |
| !! | CAAATTTGTCTGATAGTTTT+AGG | - | chr3_4:556870-556889 | Msa0483800:CDS | 25.0% |
| !! | TAGATTTGAATCAGGTTTTA+AGG | - | chr3_4:557083-557102 | Msa0483800:CDS | 25.0% |
| ! | ATTATGCTGATAATTCTGTT+AGG | - | chr3_4:557106-557125 | Msa0483800:CDS | 25.0% |
| !! | GAAATGACATTTTAGATTCA+AGG | - | chr3_4:557409-557428 | Msa0483800:intron | 25.0% |
| ! | AACAAATGCTCAAATTTGTA+AGG | + | chr3_4:557502-557521 | None:intergenic | 25.0% |
| ! | ATACAATCAGAATATTCACA+TGG | + | chr3_4:557677-557696 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | + | chr3_4:557809-557828 | None:intergenic | 25.0% |
| ! | TCAGTTACAAAACAAACTTA+AGG | - | chr3_4:557966-557985 | Msa0483800:intron | 25.0% |
| !!! | TTACGTTATTTTTATGCAGA+AGG | - | chr3_4:558237-558256 | Msa0483800:intron | 25.0% |
| ! | GTTATATAATCTGAATCGTT+TGG | + | chr3_4:558276-558295 | None:intergenic | 25.0% |
| ! | AGAAGAGTTATATGTCATAA+AGG | - | chr3_4:558367-558386 | Msa0483800:intron | 25.0% |
| !! | ACAAATTTGAAGCTAAAACA+AGG | - | chr3_4:558547-558566 | Msa0483800:intron | 25.0% |
| ! | AGTAACTTCTTCATTAAATG+AGG | - | chr3_4:558576-558595 | Msa0483800:intron | 25.0% |
| !! | AAAGAGTACAAATTTGCATT+TGG | + | chr3_4:558646-558665 | None:intergenic | 25.0% |
| ! | AAAGAGAATAGATCCAATAA+AGG | + | chr3_4:558899-558918 | None:intergenic | 25.0% |
| ! | TTTATTGGATCTATTCTCTT+TGG | - | chr3_4:558898-558917 | Msa0483800:CDS | 25.0% |
| !!! | TCTTTTAGGATCAAAGAAAA+TGG | + | chr3_4:558992-559011 | None:intergenic | 25.0% |
| !!! | ATCTGTTTTTCATTTCTTGA+CGG | - | chr3_4:559023-559042 | Msa0483800:intron | 25.0% |
| ! | CAATTCTATTGAGAAATACA+AGG | + | chr3_4:559082-559101 | None:intergenic | 25.0% |
| ! | CTTGTATTTCTCAATAGAAT+TGG | - | chr3_4:559080-559099 | Msa0483800:intron | 25.0% |
| ! | GATTAATGAATATGCTTTGA+AGG | + | chr3_4:559113-559132 | None:intergenic | 25.0% |
| ! | TAATATGTACTATGAAGAAC+TGG | - | chr3_4:559140-559159 | Msa0483800:intron | 25.0% |
| ! | TATGACAAACAGACAATAAA+CGG | + | chr3_4:559482-559501 | None:intergenic | 25.0% |
| !!! | TGGGTTTTAAATTCTACAAA+AGG | - | chr3_4:559595-559614 | Msa0483800:CDS | 25.0% |
| ! | CTACAAGCAATAACTAAATT+AGG | + | chr3_4:559752-559771 | None:intergenic | 25.0% |
| ! | GTAAAACTTGAAAATATCGA+AGG | + | chr3_4:559991-560010 | None:intergenic | 25.0% |
| ! | AAATATCAGAAAAGATTGAG+AGG | - | chr3_4:560262-560281 | Msa0483800:intron | 25.0% |
| !!! | CGCATGTGAAATTATTTTTT+TGG | + | chr3_4:560343-560362 | None:intergenic | 25.0% |
| ! | ACAAGCTAGAATTAAGATAT+GGG | - | chr3_4:560454-560473 | Msa0483800:intron | 25.0% |
| ! | AATATTATACCCAATGTTGA+TGG | + | chr3_4:560507-560526 | None:intergenic | 25.0% |
| !! | TTTTTGACGATTCATGTTTT+AGG | - | chr3_4:560846-560865 | Msa0483800:CDS | 25.0% |
| ! | AAATGATATAACTGGCAAAA+CGG | - | chr3_4:561276-561295 | Msa0483800:CDS | 25.0% |
| !! | ACATTTTATAAAACGGTACA+CGG | + | chr3_4:561578-561597 | None:intergenic | 25.0% |
| ! | ACTTATTTGAATTTATCTGC+TGG | - | chr3_4:561781-561800 | Msa0483800:CDS | 25.0% |
| ! | CTTATTTGAATTTATCTGCT+GGG | - | chr3_4:561782-561801 | Msa0483800:CDS | 25.0% |
| ! | TTTCACTCTATTCTTATATG+AGG | - | chr3_4:562112-562131 | Msa0483800:intron | 25.0% |
| ! | ATAGATGACAACATATTAGA+TGG | + | chr3_4:562290-562309 | None:intergenic | 25.0% |
| !! | ATGAAGTATTAGTGCTATAT+AGG | - | chr3_4:562476-562495 | Msa0483800:intron | 25.0% |
| ! | TCTGTTATATAATAGCATTC+CGG | - | chr3_4:562544-562563 | Msa0483800:intron | 25.0% |
| ! | GAAAATGTAAATGTTTGGTA+GGG | + | chr3_4:562909-562928 | None:intergenic | 25.0% |
| ! | AGAAAATGTAAATGTTTGGT+AGG | + | chr3_4:562910-562929 | None:intergenic | 25.0% |
| ! | TGTATTCTACTTTATGTGTT+CGG | + | chr3_4:562966-562985 | None:intergenic | 25.0% |
| ! | GCAGAAGAAGAAAATTATTA+TGG | + | chr3_4:563148-563167 | None:intergenic | 25.0% |
| ! | TATTTATTCGTGTTTGCTTA+TGG | - | chr3_4:563345-563364 | Msa0483800:exon | 25.0% |
| ! | AAATAATGTGAGAATCCAAA+AGG | + | chr3_4:563439-563458 | None:intergenic | 25.0% |
| !! | ATGTAAAGGAAGTATAACAA+AGG | - | chr3_4:563678-563697 | Msa0483800:five_prime_UTR | 25.0% |
| ! | ATTTTGAATTTGACCCTGAA+AGG | + | chr3_4:556513-556532 | None:intergenic | 30.0% |
| AGCTTCAAGTGAAAAACAAA+AGG | + | chr3_4:556628-556647 | None:intergenic | 30.0% | |
| CAACAAGATAGATTTGAATC+AGG | - | chr3_4:557075-557094 | Msa0483800:CDS | 30.0% | |
| AATTTCTATTTCCTTGTTGC+TGG | - | chr3_4:557195-557214 | Msa0483800:CDS | 30.0% | |
| ! | ATCTAAGATCACTTTCTTAC+TGG | - | chr3_4:557530-557549 | Msa0483800:intron | 30.0% |
| TTGATAGAGAATGAACAAGT+TGG | - | chr3_4:557697-557716 | Msa0483800:intron | 30.0% | |
| TTTCTACATGTTGAGAAAGA+CGG | - | chr3_4:558062-558081 | Msa0483800:CDS | 30.0% | |
| ATGTCTAAGTTACATAAGAG+AGG | - | chr3_4:558120-558139 | Msa0483800:CDS | 30.0% | |
| AGAGTTATATGTCATAAAGG+TGG | - | chr3_4:558370-558389 | Msa0483800:intron | 30.0% | |
| ! | TGGTGGCAATTTTGAATATA+CGG | - | chr3_4:558390-558409 | Msa0483800:intron | 30.0% |
| ! | TTTGAAGCTAAAACAAGGTT+TGG | - | chr3_4:558552-558571 | Msa0483800:intron | 30.0% |
| ! | GCAAATTTGTACTCTTTTGT+CGG | - | chr3_4:558649-558668 | Msa0483800:CDS | 30.0% |
| ! | CAAATTTGTACTCTTTTGTC+GGG | - | chr3_4:558650-558669 | Msa0483800:CDS | 30.0% |
| !!! | TATTACGAAGTTTTGAGTCT+CGG | + | chr3_4:558729-558748 | None:intergenic | 30.0% |
| CGTAATACAGACTTCATATT+CGG | - | chr3_4:558742-558761 | Msa0483800:intron | 30.0% | |
| ACAACGGAATTATGAAAAGA+TGG | - | chr3_4:558944-558963 | Msa0483800:intron | 30.0% | |
| ! | TTTAGGATCAAAGAAAATGG+TGG | + | chr3_4:558989-559008 | None:intergenic | 30.0% |
| GAAGAAGTTGTATAGCATTA+AGG | + | chr3_4:559049-559068 | None:intergenic | 30.0% | |
| ATTGAGAAATACAAGGAGAT+GGG | + | chr3_4:559075-559094 | None:intergenic | 30.0% | |
| TATTGAGAAATACAAGGAGA+TGG | + | chr3_4:559076-559095 | None:intergenic | 30.0% | |
| ! | TTCATTCAAGTTTGAAGTAC+GGG | + | chr3_4:559181-559200 | None:intergenic | 30.0% |
| ! | CTTCATTCAAGTTTGAAGTA+CGG | + | chr3_4:559182-559201 | None:intergenic | 30.0% |
| TCAAACTTGAATGAAGAACT+CGG | - | chr3_4:559186-559205 | Msa0483800:intron | 30.0% | |
| ACAATCCTTTCTGATAAAAC+TGG | - | chr3_4:559219-559238 | Msa0483800:intron | 30.0% | |
| !! | AAGTTCCAGTTTTATCAGAA+AGG | + | chr3_4:559227-559246 | None:intergenic | 30.0% |
| AATGGAGTTCATCAAATGTT+CGG | - | chr3_4:559260-559279 | Msa0483800:CDS | 30.0% | |
| AACTGGAATCAATTGATATC+AGG | - | chr3_4:559346-559365 | Msa0483800:CDS | 30.0% | |
| ACTGGAATCAATTGATATCA+GGG | - | chr3_4:559347-559366 | Msa0483800:CDS | 30.0% | |
| AAAGAATAATGAACGGAAAC+TGG | - | chr3_4:559418-559437 | Msa0483800:CDS | 30.0% | |
| TCAGAACAGTTTATCAATGA+TGG | - | chr3_4:559620-559639 | Msa0483800:CDS | 30.0% | |
| TCATGTTAAATAATGCGGAA+AGG | - | chr3_4:559798-559817 | Msa0483800:CDS | 30.0% | |
| GTGATAGTTAAAGATGAAGA+CGG | - | chr3_4:559909-559928 | Msa0483800:intron | 30.0% | |
| TGATAGTTAAAGATGAAGAC+GGG | - | chr3_4:559910-559929 | Msa0483800:intron | 30.0% | |
| ! | AGAATTTTGTTGCTCTGTAA+AGG | - | chr3_4:559933-559952 | Msa0483800:intron | 30.0% |
| AGTCGATATGCTAAATGAAA+AGG | + | chr3_4:560013-560032 | None:intergenic | 30.0% | |
| TGCATGGAAATTATGATTCA+AGG | + | chr3_4:560038-560057 | None:intergenic | 30.0% | |
| GGAGTTTGAAGAAAAAACTT+TGG | - | chr3_4:560092-560111 | Msa0483800:CDS | 30.0% | |
| AATCAATGATTCATGATCCA+TGG | + | chr3_4:560238-560257 | None:intergenic | 30.0% | |
| !!! | TTTTTTTGGTTACCCCATTT+TGG | + | chr3_4:560329-560348 | None:intergenic | 30.0% |
| CACAAGCTAGAATTAAGATA+TGG | - | chr3_4:560453-560472 | Msa0483800:intron | 30.0% | |
| !! | ATTAAGATATGGGTTTTGAC+TGG | - | chr3_4:560464-560483 | Msa0483800:intron | 30.0% |
| !!! | TTAAGATATGGGTTTTGACT+GGG | - | chr3_4:560465-560484 | Msa0483800:intron | 30.0% |
| TTCTCTAATGCTTGAATTTC+AGG | + | chr3_4:560674-560693 | None:intergenic | 30.0% | |
| TGAAATTCAAGCATTAGAGA+AGG | - | chr3_4:560673-560692 | Msa0483800:CDS | 30.0% | |
| AACACTAATTGAAGCTACAT+AGG | + | chr3_4:560789-560808 | None:intergenic | 30.0% | |
| !! | ATTCATGTTTTAGGCATCAA+GGG | - | chr3_4:560855-560874 | Msa0483800:CDS | 30.0% |
| !!! | TTTCCTTATTTTTGTTGGTG+TGG | - | chr3_4:561135-561154 | Msa0483800:CDS | 30.0% |
| ! | GCTGCTTATGATTATTGTTT+TGG | - | chr3_4:561325-561344 | Msa0483800:CDS | 30.0% |
| TTATTGGTACCTCTCATAAA+AGG | - | chr3_4:561367-561386 | Msa0483800:CDS | 30.0% | |
| ! | ATCTAGTAACCTTTTATGAG+AGG | + | chr3_4:561379-561398 | None:intergenic | 30.0% |
| CTCATAAAAGGTTACTAGAT+TGG | - | chr3_4:561379-561398 | Msa0483800:CDS | 30.0% | |
| ATATTGCAATTGCACAATTC+CGG | - | chr3_4:561642-561661 | Msa0483800:CDS | 30.0% | |
| GAAAGATTACTTCTTGTACA+TGG | - | chr3_4:561671-561690 | Msa0483800:CDS | 30.0% | |
| TTTGAATGATCTTACCATTG+TGG | + | chr3_4:561720-561739 | None:intergenic | 30.0% | |
| TTATTTCCAATAAACTCTCC+AGG | - | chr3_4:561877-561896 | Msa0483800:CDS | 30.0% | |
| TATTAGTGCTATATAGGCTT+AGG | - | chr3_4:562482-562501 | Msa0483800:intron | 30.0% | |
| !! | AAACAACCACATTTTAATCG+TGG | + | chr3_4:563499-563518 | None:intergenic | 30.0% |
| TCACAAAAGTTAGTAGTTGT+TGG | + | chr3_4:563638-563657 | None:intergenic | 30.0% | |
| !! | AAAGGTTTCTAGTTGAGAAT+GGG | - | chr3_4:563696-563715 | Msa0483800:five_prime_UTR | 30.0% |
| !! | TGCTACTTTCACTTTGATTC+CGG | - | chr3_4:556417-556436 | Msa0483800:three_prime_UTR | 35.0% |
| ! | GTACTTTTCCTACAAATTGC+CGG | + | chr3_4:556439-556458 | None:intergenic | 35.0% |
| GGTGAAGAAAAGTAGAAACA+TGG | + | chr3_4:556537-556556 | None:intergenic | 35.0% | |
| !! | AGTCAAGTGCTTTTTGTCTA+AGG | - | chr3_4:556814-556833 | Msa0483800:CDS | 35.0% |
| !! | AAGTGCTTTTTGTCTAAGGT+GGG | - | chr3_4:556818-556837 | Msa0483800:CDS | 35.0% |
| TAGGGAAGATAAAATCTCAG+TGG | - | chr3_4:556889-556908 | Msa0483800:CDS | 35.0% | |
| GAATGCTCTCTCTTAAACTT+TGG | + | chr3_4:557009-557028 | None:intergenic | 35.0% | |
| ATTCACAGATTGGAAGACAA+GGG | - | chr3_4:557025-557044 | Msa0483800:CDS | 35.0% | |
| AACTGCTCAAACAATGACTT+AGG | + | chr3_4:557162-557181 | None:intergenic | 35.0% | |
| AGTCATTGTTTGAGCAGTTT+AGG | - | chr3_4:557163-557182 | Msa0483800:CDS | 35.0% | |
| ATTGTTTGAGCAGTTTAGGA+GGG | - | chr3_4:557167-557186 | Msa0483800:CDS | 35.0% | |
| ATAGCACTAACAGCAGTATA+AGG | + | chr3_4:557246-557265 | None:intergenic | 35.0% | |
| CTTCCTTTAGCTGTTATAGT+TGG | - | chr3_4:557267-557286 | Msa0483800:intron | 35.0% | |
| ! | TGTTATAGTTGGTGCAACTA+TGG | - | chr3_4:557278-557297 | Msa0483800:intron | 35.0% |
| !!! | AAGGTGTTGAAGATTTTCGT+CGG | - | chr3_4:557307-557326 | Msa0483800:intron | 35.0% |
| ! | AGATTTTCGTCGGAAAAAAC+AGG | - | chr3_4:557317-557336 | Msa0483800:intron | 35.0% |
| ! | TTGCTTTGGATTCTGTTTCT+CGG | - | chr3_4:557470-557489 | Msa0483800:intron | 35.0% |
| ! | GTAATTATATGTGTCGGTGT+CGG | + | chr3_4:557803-557822 | None:intergenic | 35.0% |
| TAAGCTATGAAGCATGGATA+CGG | + | chr3_4:557902-557921 | None:intergenic | 35.0% | |
| GAGTAATAAGCTATGAAGCA+TGG | + | chr3_4:557908-557927 | None:intergenic | 35.0% | |
| !! | AACAAACTTAAGGCCTTGTT+TGG | - | chr3_4:557976-557995 | Msa0483800:intron | 35.0% |
| !! | ATTAGTTCTGCAGGATATTG+AGG | - | chr3_4:558336-558355 | Msa0483800:intron | 35.0% |
| GTTATATGTCATAAAGGTGG+TGG | - | chr3_4:558373-558392 | Msa0483800:intron | 35.0% | |
| ! | GCAATTTTGAATATACGGAG+TGG | - | chr3_4:558395-558414 | Msa0483800:intron | 35.0% |
| ACTAAACGTGACTTGAACAA+CGG | - | chr3_4:558928-558947 | Msa0483800:intron | 35.0% | |
| ! | AAGAAAATGGTGGAATCATC+TGG | + | chr3_4:558979-558998 | None:intergenic | 35.0% |
| GAAATGAAAAACAGATGCTG+CGG | + | chr3_4:559019-559038 | None:intergenic | 35.0% | |
| CAGAAAGGATTGTGTCAATT+TGG | + | chr3_4:559212-559231 | None:intergenic | 35.0% | |
| !! | AACTTTGACTTGCAACTCAA+TGG | - | chr3_4:559242-559261 | Msa0483800:CDS | 35.0% |
| GATCGAAAAGAACCAATCAA+AGG | - | chr3_4:559378-559397 | Msa0483800:CDS | 35.0% | |
| ! | CAGTTTATCAATGATGGAGT+TGG | - | chr3_4:559626-559645 | Msa0483800:CDS | 35.0% |
| TTGAAAATATCGAAGGCTAC+AGG | + | chr3_4:559984-560003 | None:intergenic | 35.0% | |
| TTTGAAAGGCTTGCCATTAA+TGG | - | chr3_4:560066-560085 | Msa0483800:CDS | 35.0% | |
| TTCAAACTCCCTTCCATTAA+TGG | + | chr3_4:560082-560101 | None:intergenic | 35.0% | |
| TTCTTCATCAAGTTCACGAT+AGG | + | chr3_4:560166-560185 | None:intergenic | 35.0% | |
| ! | GGATCATGAATCATTGATTG+AGG | - | chr3_4:560239-560258 | Msa0483800:intron | 35.0% |
| TAGAAGACAAGCTCCAAAAT+GGG | - | chr3_4:560313-560332 | Msa0483800:intron | 35.0% | |
| !!! | TAAGATATGGGTTTTGACTG+GGG | - | chr3_4:560466-560485 | Msa0483800:intron | 35.0% |
| ATTCAAGCATTAGAGAAGGA+TGG | - | chr3_4:560677-560696 | Msa0483800:CDS | 35.0% | |
| !! | GATTCATGTTTTAGGCATCA+AGG | - | chr3_4:560854-560873 | Msa0483800:CDS | 35.0% |
| GTGTATCTTCAGATATCTGA+AGG | - | chr3_4:560883-560902 | Msa0483800:CDS | 35.0% | |
| AAACTGCTTTCTGCATCTAA+AGG | - | chr3_4:560910-560929 | Msa0483800:CDS | 35.0% | |
| AACTGCTTTCTGCATCTAAA+GGG | - | chr3_4:560911-560930 | Msa0483800:CDS | 35.0% | |
| TAGAGGGAGAAACAAAGAAA+AGG | + | chr3_4:561095-561114 | None:intergenic | 35.0% | |
| AGGACAAATTGTCAAGTAGA+GGG | + | chr3_4:561111-561130 | None:intergenic | 35.0% | |
| AAGGACAAATTGTCAAGTAG+AGG | + | chr3_4:561112-561131 | None:intergenic | 35.0% | |
| AAGCCACACCAACAAAAATA+AGG | + | chr3_4:561141-561160 | None:intergenic | 35.0% | |
| GGTAAAACAACATTAGCCAT+CGG | - | chr3_4:561416-561435 | Msa0483800:CDS | 35.0% | |
| GAAGTAATCTTTCCAGATAC+CGG | + | chr3_4:561664-561683 | None:intergenic | 35.0% | |
| TACTTCTTGTACATGGACAT+TGG | - | chr3_4:561678-561697 | Msa0483800:CDS | 35.0% | |
| !! | GTTGTTTTCATAAGCTATCC+TGG | + | chr3_4:561898-561917 | None:intergenic | 35.0% |
| AAAAACCAGTCATTGTATGC+AGG | + | chr3_4:562161-562180 | None:intergenic | 35.0% | |
| ACACATGTGGTTACATTCAA+TGG | + | chr3_4:562412-562431 | None:intergenic | 35.0% | |
| AGTGTTCAATACAACACATG+TGG | + | chr3_4:562425-562444 | None:intergenic | 35.0% | |
| TGTGTTGTATTGAACACTGA+CGG | - | chr3_4:562427-562446 | Msa0483800:intron | 35.0% | |
| CTGTCTTCTCTTTCATAATC+CGG | + | chr3_4:562566-562585 | None:intergenic | 35.0% | |
| ! | TACTTTATGTGTTCGGCTTT+TGG | + | chr3_4:562959-562978 | None:intergenic | 35.0% |
| TTTCCTATCTTGTACCAAGA+AGG | - | chr3_4:563057-563076 | Msa0483800:CDS | 35.0% | |
| GTGTACAGAATGTCCTATTT+AGG | - | chr3_4:563079-563098 | Msa0483800:CDS | 35.0% | |
| TACAGAATGTCCTATTTAGG+TGG | - | chr3_4:563082-563101 | Msa0483800:CDS | 35.0% | |
| TGAGCATCCAACTTAGAATT+CGG | + | chr3_4:563110-563129 | None:intergenic | 35.0% | |
| ! | ATTCTAAGTTGGATGCTCAA+CGG | - | chr3_4:563111-563130 | Msa0483800:CDS | 35.0% |
| TTCTTCTGCACTAAAGCAAT+AGG | - | chr3_4:563159-563178 | Msa0483800:CDS | 35.0% | |
| !! | CATGTATACTTGTGTCGTTT+GGG | - | chr3_4:563239-563258 | Msa0483800:CDS | 35.0% |
| AATAGCAATAGAACCCCAAA+TGG | + | chr3_4:563322-563341 | None:intergenic | 35.0% | |
| ! | TTTGGGGTTCTATTGCTATT+TGG | - | chr3_4:563322-563341 | Msa0483800:CDS | 35.0% |
| GATTCTCACATTATTTGTCG+CGG | - | chr3_4:563443-563462 | Msa0483800:five_prime_UTR | 35.0% | |
| TGTTTCCTATGCATCATGAA+AGG | - | chr3_4:563514-563533 | Msa0483800:five_prime_UTR | 35.0% | |
| GTTTCCTATGCATCATGAAA+GGG | - | chr3_4:563515-563534 | Msa0483800:five_prime_UTR | 35.0% | |
| GTACAATGGATGAGGTATAA+GGG | - | chr3_4:563537-563556 | Msa0483800:five_prime_UTR | 35.0% | |
| !! | CAAAGGTTTCTAGTTGAGAA+TGG | - | chr3_4:563695-563714 | Msa0483800:five_prime_UTR | 35.0% |
| CTTTGATTCCGGCAATTTGT+AGG | - | chr3_4:556428-556447 | Msa0483800:three_prime_UTR | 40.0% | |
| TGATATCTAGAAGAAGGACG+CGG | + | chr3_4:556558-556577 | None:intergenic | 40.0% | |
| !! | CAAGTGCTTTTTGTCTAAGG+TGG | - | chr3_4:556817-556836 | Msa0483800:CDS | 40.0% |
| !! | AGTGCTTTTTGTCTAAGGTG+GGG | - | chr3_4:556819-556838 | Msa0483800:CDS | 40.0% |
| !!! | GGTAGGTTTTGGAGACTTTA+AGG | - | chr3_4:556840-556859 | Msa0483800:CDS | 40.0% |
| !! | AAGAGAGAGCATTCACAGAT+TGG | - | chr3_4:557015-557034 | Msa0483800:CDS | 40.0% |
| CATTCACAGATTGGAAGACA+AGG | - | chr3_4:557024-557043 | Msa0483800:CDS | 40.0% | |
| !! | TTGGAAGACAAGGGTATTCT+AGG | - | chr3_4:557034-557053 | Msa0483800:CDS | 40.0% |
| !! | TGGAAGACAAGGGTATTCTA+GGG | - | chr3_4:557035-557054 | Msa0483800:CDS | 40.0% |
| CATTGTTTGAGCAGTTTAGG+AGG | - | chr3_4:557166-557185 | Msa0483800:CDS | 40.0% | |
| AAGCTAAGATACCAGCAACA+AGG | + | chr3_4:557209-557228 | None:intergenic | 40.0% | |
| GCACCAACTATAACAGCTAA+AGG | + | chr3_4:557273-557292 | None:intergenic | 40.0% | |
| ! | CAAATGTATCAGCGTCGTTT+TGG | + | chr3_4:557453-557472 | None:intergenic | 40.0% |
| ! | GTTGGTTCCAAAATAACTGC+AGG | - | chr3_4:557715-557734 | Msa0483800:intron | 40.0% |
| GTTCCAAAATAACTGCAGGT+AGG | - | chr3_4:557719-557738 | Msa0483800:intron | 40.0% | |
| ! | CAACCTACCTGCAGTTATTT+TGG | + | chr3_4:557725-557744 | None:intergenic | 40.0% |
| CAAAATAACTGCAGGTAGGT+TGG | - | chr3_4:557723-557742 | Msa0483800:intron | 40.0% | |
| TTCTCTGATTAGACGTGTCT+CGG | - | chr3_4:557758-557777 | Msa0483800:intron | 40.0% | |
| GATCTAGCTATTAACGTAGC+TGG | + | chr3_4:558002-558021 | None:intergenic | 40.0% | |
| !! | AGCTAACTGATTAGTTCTGC+AGG | - | chr3_4:558327-558346 | Msa0483800:intron | 40.0% |
| AACTGGACGAAAGCAGTAAT+AGG | + | chr3_4:558480-558499 | None:intergenic | 40.0% | |
| CTACGTTGAAACGATGAACT+TGG | - | chr3_4:558516-558535 | Msa0483800:intron | 40.0% | |
| GTTGAAACGATGAACTTGGA+TGG | - | chr3_4:558520-558539 | Msa0483800:intron | 40.0% | |
| !! | TGACAGCAGCTTTGAAATCA+TGG | + | chr3_4:558612-558631 | None:intergenic | 40.0% |
| ! | TTTTGCTCCTTTTCGAAGGA+GGG | + | chr3_4:558819-558838 | None:intergenic | 40.0% |
| ! | ATTTTGCTCCTTTTCGAAGG+AGG | + | chr3_4:558820-558839 | None:intergenic | 40.0% |
| ! | TCGATTTTGCTCCTTTTCGA+AGG | + | chr3_4:558823-558842 | None:intergenic | 40.0% |
| GAGCAAAATCGAGATGAAGA+TGG | - | chr3_4:558831-558850 | Msa0483800:CDS | 40.0% | |
| CTATGAAGAACTGGACAAAC+CGG | - | chr3_4:559149-559168 | Msa0483800:intron | 40.0% | |
| TTCATCAAATGTTCGGTTGC+TGG | - | chr3_4:559267-559286 | Msa0483800:CDS | 40.0% | |
| TCATCAAATGTTCGGTTGCT+GGG | - | chr3_4:559268-559287 | Msa0483800:CDS | 40.0% | |
| !! | GATTGGTTCTTTTCGATCAC+TGG | + | chr3_4:559376-559395 | None:intergenic | 40.0% |
| TTCTGTATAACATCTGCACG+AGG | + | chr3_4:559453-559472 | None:intergenic | 40.0% | |
| ! | ATCACAAATGCTGCTTCATC+AGG | + | chr3_4:559561-559580 | None:intergenic | 40.0% |
| ! | ATCAATGATGGAGTTGGATC+CGG | - | chr3_4:559632-559651 | Msa0483800:CDS | 40.0% |
| ! | TTTCTGGCAATGAGGTTGAA+AGG | - | chr3_4:559655-559674 | Msa0483800:CDS | 40.0% |
| ACGTAAACAGAGAAGAGAGT+TGG | + | chr3_4:559700-559719 | None:intergenic | 40.0% | |
| CTTTCAAACATGACACTGCA+TGG | + | chr3_4:560054-560073 | None:intergenic | 40.0% | |
| CATGCAGTGTCATGTTTGAA+AGG | - | chr3_4:560052-560071 | Msa0483800:CDS | 40.0% | |
| AAAGGCTTGCCATTAATGGA+AGG | - | chr3_4:560070-560089 | Msa0483800:CDS | 40.0% | |
| AAGGCTTGCCATTAATGGAA+GGG | - | chr3_4:560071-560090 | Msa0483800:CDS | 40.0% | |
| ! | GGTGACTGTAATTTTCGCTT+CGG | + | chr3_4:560217-560236 | None:intergenic | 40.0% |
| AGCGAAAATTACAGTCACCA+TGG | - | chr3_4:560218-560237 | Msa0483800:CDS | 40.0% | |
| GAGAGGAATCTAATCCTTCT+CGG | - | chr3_4:560279-560298 | Msa0483800:intron | 40.0% | |
| GTAGAAGACAAGCTCCAAAA+TGG | - | chr3_4:560312-560331 | Msa0483800:intron | 40.0% | |
| AGAAGACAAGCTCCAAAATG+GGG | - | chr3_4:560314-560333 | Msa0483800:intron | 40.0% | |
| ! | GCAAGCTTTTCAATACACTC+AGG | + | chr3_4:560434-560453 | None:intergenic | 40.0% |
| !!! | GGTTTTGACTGGGGATAAAA+TGG | - | chr3_4:560475-560494 | Msa0483800:intron | 40.0% |
| AGACAAGATGGCTATCATGA+AGG | - | chr3_4:560703-560722 | Msa0483800:CDS | 40.0% | |
| GCATTTGCTCTGATAATCGA+TGG | - | chr3_4:560946-560965 | Msa0483800:CDS | 40.0% | |
| GTCACTTGTTTATGCTCTAG+AGG | - | chr3_4:560972-560991 | Msa0483800:CDS | 40.0% | |
| AATCATAAGCAGCATGCACA+CGG | + | chr3_4:561318-561337 | None:intergenic | 40.0% | |
| ATGCTTCAAGAAGCTGATGT+AGG | - | chr3_4:561461-561480 | Msa0483800:CDS | 40.0% | |
| TGCAATATCACTAGCCATGA+CGG | + | chr3_4:561630-561649 | None:intergenic | 40.0% | |
| AATTGCACAATTCCGGTATC+TGG | - | chr3_4:561649-561668 | Msa0483800:CDS | 40.0% | |
| !! | TACATGGACATTGGTGTTAC+AGG | - | chr3_4:561687-561706 | Msa0483800:CDS | 40.0% |
| AGCTATCCTGGAGAGTTTAT+TGG | + | chr3_4:561886-561905 | None:intergenic | 40.0% | |
| ! | TTTTGTGACGTTGCCTTGAT+TGG | + | chr3_4:562024-562043 | None:intergenic | 40.0% |
| TTGACCAAGATGTATCTGCT+AGG | - | chr3_4:562234-562253 | Msa0483800:intron | 40.0% | |
| AGTACCTAGCAGATACATCT+TGG | + | chr3_4:562241-562260 | None:intergenic | 40.0% | |
| ACACCTTCTTGGTACAAGAT+AGG | + | chr3_4:563063-563082 | None:intergenic | 40.0% | |
| ! | TTCTAAGTTGGATGCTCAAC+GGG | - | chr3_4:563112-563131 | Msa0483800:CDS | 40.0% |
| ! | TCCTAGTATGTCTTTTCCAG+CGG | + | chr3_4:563214-563233 | None:intergenic | 40.0% |
| CCAAACGACACAAGTATACA+TGG | + | chr3_4:563241-563260 | None:intergenic | 40.0% | |
| ! | CCATGTATACTTGTGTCGTT+TGG | - | chr3_4:563238-563257 | Msa0483800:CDS | 40.0% |
| ! | TTGGGTTGTAAACCTACAGA+TGG | - | chr3_4:563257-563276 | Msa0483800:CDS | 40.0% |
| AATGGCAACATGTTGTACCA+AGG | + | chr3_4:563304-563323 | None:intergenic | 40.0% | |
| TGGTACAACATGTTGCCATT+TGG | - | chr3_4:563304-563323 | Msa0483800:CDS | 40.0% | |
| ! | GGTACAACATGTTGCCATTT+GGG | - | chr3_4:563305-563324 | Msa0483800:CDS | 40.0% |
| ! | GTACAACATGTTGCCATTTG+GGG | - | chr3_4:563306-563325 | Msa0483800:CDS | 40.0% |
| GCAGTTGTTGAAAAGCTTGA+AGG | + | chr3_4:563378-563397 | None:intergenic | 40.0% | |
| TGTACCCTTTCATGATGCAT+AGG | + | chr3_4:563522-563541 | None:intergenic | 40.0% | |
| ! | TGCATCATGAAAGGGTACAA+TGG | - | chr3_4:563523-563542 | Msa0483800:five_prime_UTR | 40.0% |
| ! | ATGAAAGGGTACAATGGATG+AGG | - | chr3_4:563529-563548 | Msa0483800:five_prime_UTR | 40.0% |
| GGTACAATGGATGAGGTATA+AGG | - | chr3_4:563536-563555 | Msa0483800:five_prime_UTR | 40.0% | |
| !! | CTTTTTGTCTAAGGTGGGGT+AGG | - | chr3_4:556823-556842 | Msa0483800:CDS | 45.0% |
| ! | AGTTGGTGCAACTATGGTGA+AGG | - | chr3_4:557284-557303 | Msa0483800:intron | 45.0% |
| !! | TATCAGCGTCGTTTTGGTGT+CGG | + | chr3_4:557447-557466 | None:intergenic | 45.0% |
| CGACGCTGATACATTTGCTT+TGG | - | chr3_4:557456-557475 | Msa0483800:intron | 45.0% | |
| ! | GCACAGTTCAGGTTTAGATC+AGG | + | chr3_4:557933-557952 | None:intergenic | 45.0% |
| TTAACGTAGCTGGCCAAACA+AGG | + | chr3_4:557992-558011 | None:intergenic | 45.0% | |
| TACGGAGTGGAAGAATCTCA+AGG | - | chr3_4:558408-558427 | Msa0483800:intron | 45.0% | |
| GAGTGGAAGAATCTCAAGGT+AGG | - | chr3_4:558412-558431 | Msa0483800:intron | 45.0% | |
| AAAGCAGTAATAGGTCGGCA+GGG | + | chr3_4:558471-558490 | None:intergenic | 45.0% | |
| GGACGAAAGCAGTAATAGGT+CGG | + | chr3_4:558476-558495 | None:intergenic | 45.0% | |
| !! | TCGGGAGCATGGATTTTGAA+GGG | - | chr3_4:558668-558687 | Msa0483800:intron | 45.0% |
| TTCGGAGCAGTCATCTTTAC+TGG | - | chr3_4:558760-558779 | Msa0483800:intron | 45.0% | |
| ! | TTTGCTCCTTTTCGAAGGAG+GGG | + | chr3_4:558818-558837 | None:intergenic | 45.0% |
| CATCAAATGTTCGGTTGCTG+GGG | - | chr3_4:559269-559288 | Msa0483800:CDS | 45.0% | |
| ! | TTGAGCAAGCCATTGGTAGT+AGG | - | chr3_4:559319-559338 | Msa0483800:CDS | 45.0% |
| TGTTTGTCATACTGCCATGC+CGG | - | chr3_4:559491-559510 | Msa0483800:intron | 45.0% | |
| TGTGATTGCTGCAAGAGAAG+TGG | - | chr3_4:559575-559594 | Msa0483800:intron | 45.0% | |
| GTGATTGCTGCAAGAGAAGT+GGG | - | chr3_4:559576-559595 | Msa0483800:intron | 45.0% | |
| TCAACCTCATTGCCAGAAAC+CGG | + | chr3_4:559654-559673 | None:intergenic | 45.0% | |
| GTGAGTGAATATGCTGATGC+AGG | - | chr3_4:560120-560139 | Msa0483800:CDS | 45.0% | |
| ATGGAGACTGCCATCAACAT+TGG | - | chr3_4:560494-560513 | Msa0483800:intron | 45.0% | |
| TGGAGACTGCCATCAACATT+GGG | - | chr3_4:560495-560514 | Msa0483800:intron | 45.0% | |
| CAAGCATTAGAGAAGGATGG+AGG | - | chr3_4:560680-560699 | Msa0483800:CDS | 45.0% | |
| ACAACATTAGCCATCGGTGA+TGG | - | chr3_4:561422-561441 | Msa0483800:CDS | 45.0% | |
| CAAGAAGCTGATGTAGGTGT+TGG | - | chr3_4:561467-561486 | Msa0483800:CDS | 45.0% | |
| !! | GATGTAGGTGTTGGAATCAG+TGG | - | chr3_4:561476-561495 | Msa0483800:CDS | 45.0% |
| ! | GTTGGAATCAGTGGTGTTGA+AGG | - | chr3_4:561485-561504 | Msa0483800:CDS | 45.0% |
| !! | ATGGACATTGGTGTTACAGG+AGG | - | chr3_4:561690-561709 | Msa0483800:CDS | 45.0% |
| TTACAGGAGGATGTCCACAA+TGG | - | chr3_4:561703-561722 | Msa0483800:CDS | 45.0% | |
| AAGCACTTGCGAGACAGTTT+AGG | - | chr3_4:561807-561826 | Msa0483800:CDS | 45.0% | |
| GAGGTGTATGCATCATTCTC+TGG | - | chr3_4:562131-562150 | Msa0483800:intron | 45.0% | |
| ATCTTGGTCAAAGACCCCAA+GGG | + | chr3_4:562225-562244 | None:intergenic | 45.0% | |
| CGACAACACCGGTAAGAATT+TGG | - | chr3_4:562364-562383 | Msa0483800:intron | 45.0% | |
| GTATTGAACACTGACGGTGT+CGG | - | chr3_4:562433-562452 | Msa0483800:intron | 45.0% | |
| GGACATTCTGTACACCTTCT+TGG | + | chr3_4:563074-563093 | None:intergenic | 45.0% | |
| CTTCAAGCCTTTGACGAGAA+CGG | - | chr3_4:563183-563202 | Msa0483800:CDS | 45.0% | |
| ! | GGTTTTTCCGTTCTCGTCAA+AGG | + | chr3_4:563193-563212 | None:intergenic | 45.0% |
| ACCGCTGGAAAAGACATACT+AGG | - | chr3_4:563210-563229 | Msa0483800:CDS | 45.0% | |
| AGAATCCAAAAGGAAGCCGA+TGG | + | chr3_4:563429-563448 | None:intergenic | 45.0% | |
| ATCGTGGAGCACGAAAAGTA+TGG | + | chr3_4:563483-563502 | None:intergenic | 45.0% | |
| CGTGCTCCACGATTAAAATG+TGG | - | chr3_4:563490-563509 | Msa0483800:five_prime_UTR | 45.0% | |
| !!! | ATTTTTTTTTTTTTTTTTTG+AGG | - | chr3_4:563585-563604 | Msa0483800:five_prime_UTR | 5.0% |
| !! | GTCTAAGGTGGGGTAGGTTT+TGG | - | chr3_4:556829-556848 | Msa0483800:CDS | 50.0% |
| GGTGCAACTATGGTGAAGGA+AGG | - | chr3_4:557288-557307 | Msa0483800:intron | 50.0% | |
| ! | GATTAGACGTGTCTCGGTGT+CGG | - | chr3_4:557764-557783 | Msa0483800:intron | 50.0% |
| GTTAGTGTCTGTGTCGTGTC+TGG | - | chr3_4:557867-557886 | Msa0483800:intron | 50.0% | |
| GAAAGCAGTAATAGGTCGGC+AGG | + | chr3_4:558472-558491 | None:intergenic | 50.0% | |
| GCAGACTGCATCTTCGTAAC+TGG | + | chr3_4:558497-558516 | None:intergenic | 50.0% | |
| ! | GTACTCTTTTGTCGGGAGCA+TGG | - | chr3_4:558657-558676 | Msa0483800:CDS | 50.0% |
| !! | GTCGGGAGCATGGATTTTGA+AGG | - | chr3_4:558667-558686 | Msa0483800:intron | 50.0% |
| AGAAGCTGCTGAGGAGAAAG+TGG | + | chr3_4:558703-558722 | None:intergenic | 50.0% | |
| CTTTACTGGTCACGACACGA+AGG | - | chr3_4:558774-558793 | Msa0483800:intron | 50.0% | |
| ! | TTGCTCCTTTTCGAAGGAGG+GGG | + | chr3_4:558817-558836 | None:intergenic | 50.0% |
| ! | TTTGAAGTACGGGCAAGAGC+CGG | + | chr3_4:559171-559190 | None:intergenic | 50.0% |
| ACAGAGGTTGAGCAAGCCAT+TGG | - | chr3_4:559312-559331 | Msa0483800:CDS | 50.0% | |
| ! | GCAAGCCATTGGTAGTAGGT+CGG | - | chr3_4:559323-559342 | Msa0483800:CDS | 50.0% |
| CAGTTCCGACCTACTACCAA+TGG | + | chr3_4:559331-559350 | None:intergenic | 50.0% | |
| ! | CATTGGTAGTAGGTCGGAAC+TGG | - | chr3_4:559329-559348 | Msa0483800:CDS | 50.0% |
| ATGGAGTTGGATCCGGTTTC+TGG | - | chr3_4:559639-559658 | Msa0483800:CDS | 50.0% | |
| GAGCTTGTCTTCTACAGCAG+TGG | + | chr3_4:560307-560326 | None:intergenic | 50.0% | |
| ! | TCTTGTCGCTTGCTTCGACA+AGG | - | chr3_4:560617-560636 | Msa0483800:intron | 50.0% |
| GAAGGATGGAGGAGACAAGA+TGG | - | chr3_4:560691-560710 | Msa0483800:CDS | 50.0% | |
| ! | CAGAGCAAATGCTTGCTGAG+AGG | + | chr3_4:560938-560957 | None:intergenic | 50.0% |
| CATACCAGAGCCTTCTGCTT+TGG | + | chr3_4:561066-561085 | None:intergenic | 50.0% | |
| GTCATTAGCTCCATCACCGA+TGG | + | chr3_4:561435-561454 | None:intergenic | 50.0% | |
| !! | GGTGATGGAGCTAATGACGT+GGG | - | chr3_4:561437-561456 | Msa0483800:CDS | 50.0% |
| ! | CAGTGGTGTTGAAGGAATGC+AGG | - | chr3_4:561493-561512 | Msa0483800:CDS | 50.0% |
| TTGTATCCTCTCTCCTCCCT+AGG | - | chr3_4:561604-561623 | Msa0483800:CDS | 50.0% | |
| GACAGCCTGCATACAATGAC+TGG | - | chr3_4:562153-562172 | Msa0483800:intron | 50.0% | |
| CATCTTGGTCAAAGACCCCA+AGG | + | chr3_4:562226-562245 | None:intergenic | 50.0% | |
| ! | ATCTGCTAGGTACTGCGTCA+AGG | - | chr3_4:562247-562266 | Msa0483800:intron | 50.0% |
| TGTCGTGTCAGTGTCGTGTT+TGG | + | chr3_4:562349-562368 | None:intergenic | 50.0% | |
| GAATTCGGCGCCACCTAAAT+AGG | + | chr3_4:563095-563114 | None:intergenic | 50.0% | |
| CGTTCTCGTCAAAGGCTTGA+AGG | + | chr3_4:563185-563204 | None:intergenic | 50.0% | |
| !!! | TTGCTCCATCGGCTTCCTTT+TGG | - | chr3_4:563421-563440 | Msa0483800:five_prime_UTR | 50.0% |
| !! | GTGCTGACTCAGCACAGTTC+AGG | + | chr3_4:557944-557963 | None:intergenic | 55.0% |
| TCTCGGAGAAGAAGCTGCTG+AGG | + | chr3_4:558712-558731 | None:intergenic | 55.0% | |
| ! | GATGCTGCGGCGACTCTTTT+AGG | + | chr3_4:559006-559025 | None:intergenic | 55.0% |
| TCGGTTGCTGGGGTAGCTTA+TGG | - | chr3_4:559279-559298 | Msa0483800:CDS | 55.0% | |
| !! | TTATGGCCGTGGTGTCACAG+AGG | - | chr3_4:559296-559315 | Msa0483800:CDS | 55.0% |
| GCTCAACCTCTGTGACACCA+CGG | + | chr3_4:559305-559324 | None:intergenic | 55.0% | |
| TCATACTGCCATGCCGGAAG+TGG | - | chr3_4:559497-559516 | Msa0483800:intron | 55.0% | |
| CCTGTTTCCTCGTCCACTTC+CGG | + | chr3_4:559513-559532 | None:intergenic | 55.0% | |
| !! | GGATCCGGTTTCTGGCAATG+AGG | - | chr3_4:559647-559666 | Msa0483800:CDS | 55.0% |
| !! | TGCTCTGTAAAGGCGCTGAC+AGG | - | chr3_4:559943-559962 | Msa0483800:intron | 55.0% |
| TCGCTCATCGCCAAAGCAGA+AGG | - | chr3_4:561053-561072 | Msa0483800:CDS | 55.0% | |
| ATCGCCAAAGCAGAAGGCTC+TGG | - | chr3_4:561059-561078 | Msa0483800:CDS | 55.0% | |
| !! | CGGTGATGGAGCTAATGACG+TGG | - | chr3_4:561436-561455 | Msa0483800:CDS | 55.0% |
| TCACTAGCCATGACGGCCTA+GGG | + | chr3_4:561623-561642 | None:intergenic | 55.0% | |
| ATCACTAGCCATGACGGCCT+AGG | + | chr3_4:561624-561643 | None:intergenic | 55.0% | |
| GTCAAAGACCCCAAGGGCAA+TGG | + | chr3_4:562219-562238 | None:intergenic | 55.0% | |
| CGACACTGACACGACAACAC+CGG | - | chr3_4:562353-562372 | Msa0483800:intron | 55.0% | |
| ! | GGTGGCGCCGAATTCTAAGT+TGG | - | chr3_4:563100-563119 | Msa0483800:CDS | 55.0% |
| GACGAGAACGGAAAAACCGC+TGG | - | chr3_4:563195-563214 | Msa0483800:CDS | 55.0% | |
| CGCTGTGCGATACTTCACCT+TGG | - | chr3_4:563284-563303 | Msa0483800:CDS | 55.0% | |
| CGCTGAGACTCTTGCTCCAT+CGG | - | chr3_4:563410-563429 | Msa0483800:five_prime_UTR | 55.0% | |
| ! | CTGCAGGTAGGTTGGACGCA+CGG | - | chr3_4:557731-557750 | Msa0483800:intron | 60.0% |
| ! | CCTTTTCGAAGGAGGGGGAG+TGG | + | chr3_4:558812-558831 | None:intergenic | 60.0% |
| CCACTCCCCCTCCTTCGAAA+AGG | - | chr3_4:558809-558828 | Msa0483800:CDS | 60.0% | |
| TTCCTCGTCCACTTCCGGCA+TGG | + | chr3_4:559508-559527 | None:intergenic | 60.0% | |
| CCGGAAGTGGACGAGGAAAC+AGG | - | chr3_4:559510-559529 | Msa0483800:intron | 60.0% | |
| ! | CTACAGCAGTGGCACCGAGA+AGG | + | chr3_4:560296-560315 | None:intergenic | 60.0% |
| TCGCTTCCTGCCATTGCCCT+TGG | - | chr3_4:562206-562225 | Msa0483800:intron | 60.0% | |
| CGCTTCCTGCCATTGCCCTT+GGG | - | chr3_4:562207-562226 | Msa0483800:intron | 60.0% | |
| GCTTCCTGCCATTGCCCTTG+GGG | - | chr3_4:562208-562227 | Msa0483800:intron | 60.0% | |
| AAGACCCCAAGGGCAATGGC+AGG | + | chr3_4:562215-562234 | None:intergenic | 60.0% | |
| GCTGGGGTAGCTTATGGCCG+TGG | - | chr3_4:559285-559304 | Msa0483800:CDS | 65.0% | |
| TGCCATGCCGGAAGTGGACG+AGG | - | chr3_4:559503-559522 | Msa0483800:intron | 65.0% | |
| TGACGGCCTAGGGAGGAGAG+AGG | + | chr3_4:561613-561632 | None:intergenic | 65.0% | |
| CTCTCCTCCCTAGGCCGTCA+TGG | - | chr3_4:561613-561632 | Msa0483800:CDS | 65.0% | |
| CTAGCCATGACGGCCTAGGG+AGG | + | chr3_4:561620-561639 | None:intergenic | 65.0% | |
| GCACAGCGAGCGCCATCTGT+AGG | + | chr3_4:563272-563291 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 556411 | 563895 | 556411 | ID=Msa0483800;Name=Msa0483800 |
| chr3_4 | mRNA | 556411 | 563895 | 556411 | ID=Msa0483800-mRNA-1;Parent=Msa0483800;Name=Msa0483800-mRNA-1;_AED=0.04;_eAED=0.04;_QI=538|1|1|1|1|1|11|311|1154 |
| chr3_4 | exon | 556411 | 557249 | 556411 | ID=Msa0483800-mRNA-1:exon:180;Parent=Msa0483800-mRNA-1 |
| chr3_4 | exon | 558038 | 558229 | 558038 | ID=Msa0483800-mRNA-1:exon:179;Parent=Msa0483800-mRNA-1 |
| chr3_4 | exon | 558582 | 558680 | 558582 | ID=Msa0483800-mRNA-1:exon:178;Parent=Msa0483800-mRNA-1 |
| chr3_4 | exon | 558792 | 558917 | 558792 | ID=Msa0483800-mRNA-1:exon:177;Parent=Msa0483800-mRNA-1 |
| chr3_4 | exon | 559226 | 559438 | 559226 | ID=Msa0483800-mRNA-1:exon:176;Parent=Msa0483800-mRNA-1 |
| chr3_4 | exon | 559582 | 559693 | 559582 | ID=Msa0483800-mRNA-1:exon:175;Parent=Msa0483800-mRNA-1 |
| chr3_4 | exon | 559790 | 559878 | 559790 | ID=Msa0483800-mRNA-1:exon:174;Parent=Msa0483800-mRNA-1 |
| chr3_4 | exon | 559971 | 560247 | 559971 | ID=Msa0483800-mRNA-1:exon:173;Parent=Msa0483800-mRNA-1 |
| chr3_4 | exon | 560342 | 560452 | 560342 | ID=Msa0483800-mRNA-1:exon:172;Parent=Msa0483800-mRNA-1 |
| chr3_4 | exon | 560630 | 561957 | 560630 | ID=Msa0483800-mRNA-1:exon:171;Parent=Msa0483800-mRNA-1 |
| chr3_4 | exon | 562968 | 563895 | 562968 | ID=Msa0483800-mRNA-1:exon:170;Parent=Msa0483800-mRNA-1 |
| chr3_4 | five_prime_UTR | 563358 | 563895 | 563358 | ID=Msa0483800-mRNA-1:five_prime_utr;Parent=Msa0483800-mRNA-1 |
| chr3_4 | CDS | 562968 | 563357 | 562968 | ID=Msa0483800-mRNA-1:cds;Parent=Msa0483800-mRNA-1 |
| chr3_4 | CDS | 560630 | 561957 | 560630 | ID=Msa0483800-mRNA-1:cds;Parent=Msa0483800-mRNA-1 |
| chr3_4 | CDS | 560342 | 560452 | 560342 | ID=Msa0483800-mRNA-1:cds;Parent=Msa0483800-mRNA-1 |
| chr3_4 | CDS | 559971 | 560247 | 559971 | ID=Msa0483800-mRNA-1:cds;Parent=Msa0483800-mRNA-1 |
| chr3_4 | CDS | 559790 | 559878 | 559790 | ID=Msa0483800-mRNA-1:cds;Parent=Msa0483800-mRNA-1 |
| chr3_4 | CDS | 559582 | 559693 | 559582 | ID=Msa0483800-mRNA-1:cds;Parent=Msa0483800-mRNA-1 |
| chr3_4 | CDS | 559226 | 559438 | 559226 | ID=Msa0483800-mRNA-1:cds;Parent=Msa0483800-mRNA-1 |
| chr3_4 | CDS | 558792 | 558917 | 558792 | ID=Msa0483800-mRNA-1:cds;Parent=Msa0483800-mRNA-1 |
| chr3_4 | CDS | 558582 | 558680 | 558582 | ID=Msa0483800-mRNA-1:cds;Parent=Msa0483800-mRNA-1 |
| chr3_4 | CDS | 558038 | 558229 | 558038 | ID=Msa0483800-mRNA-1:cds;Parent=Msa0483800-mRNA-1 |
| chr3_4 | CDS | 556722 | 557249 | 556722 | ID=Msa0483800-mRNA-1:cds;Parent=Msa0483800-mRNA-1 |
| chr3_4 | three_prime_UTR | 556411 | 556721 | 556411 | ID=Msa0483800-mRNA-1:three_prime_utr;Parent=Msa0483800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
