Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0389390 | XP_003604663.1 | 82.671 | 277 | 15 | 2 | 1 | 244 | 1 | 277 | 1.91e-120 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0389390 | sp|O80450|TGT3B_ARATH | 47.809 | 251 | 94 | 3 | 30 | 243 | 33 | 283 | 2.22e-44 | 153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0389390 | G7JN34 | 82.671 | 277 | 15 | 2 | 1 | 244 | 1 | 277 | 9.14e-121 | 354 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007440 | Msa0389390 | 0.803171 | 3.958594e-49 | -8.615850e-47 |
| Msa0015480 | Msa0389390 | 0.806113 | 9.631252e-50 | -8.615850e-47 |
| Msa0031180 | Msa0389390 | 0.803144 | 4.010260e-49 | -8.615850e-47 |
| Msa0032470 | Msa0389390 | 0.801693 | 7.981145e-49 | -8.615850e-47 |
| Msa0042550 | Msa0389390 | 0.855154 | 7.630371e-62 | -8.615850e-47 |
| Msa0054260 | Msa0389390 | 0.814416 | 1.557631e-51 | -8.615850e-47 |
| Msa0056450 | Msa0389390 | 0.819159 | 1.344274e-52 | -8.615850e-47 |
| Msa0058600 | Msa0389390 | 0.823536 | 1.313979e-53 | -8.615850e-47 |
| Msa0065680 | Msa0389390 | -0.812850 | 3.444817e-51 | -8.615850e-47 |
| Msa0078480 | Msa0389390 | 0.804877 | 1.749666e-49 | -8.615850e-47 |
| Msa0078610 | Msa0389390 | 0.823065 | 1.692681e-53 | -8.615850e-47 |
| Msa0078640 | Msa0389390 | 0.812845 | 3.453151e-51 | -8.615850e-47 |
| Msa0092410 | Msa0389390 | 0.814826 | 1.264056e-51 | -8.615850e-47 |
| Msa0100090 | Msa0389390 | 0.829025 | 6.484100e-55 | -8.615850e-47 |
| Msa0103250 | Msa0389390 | 0.823797 | 1.141329e-53 | -8.615850e-47 |
| Msa0109590 | Msa0389390 | 0.836036 | 1.184092e-56 | -8.615850e-47 |
| Msa0124550 | Msa0389390 | 0.813950 | 1.974777e-51 | -8.615850e-47 |
| Msa0138020 | Msa0389390 | 0.834080 | 3.685210e-56 | -8.615850e-47 |
| Msa0140100 | Msa0389390 | 0.807912 | 4.008476e-50 | -8.615850e-47 |
| Msa0140500 | Msa0389390 | -0.808769 | 2.632167e-50 | -8.615850e-47 |
| Msa0141250 | Msa0389390 | 0.800004 | 1.766299e-48 | -8.615850e-47 |
| Msa0160960 | Msa0389390 | 0.804489 | 2.107819e-49 | -8.615850e-47 |
| Msa0178510 | Msa0389390 | 0.861899 | 7.417965e-64 | -8.615850e-47 |
| Msa0185510 | Msa0389390 | 0.800307 | 1.532750e-48 | -8.615850e-47 |
| Msa0187830 | Msa0389390 | 0.831669 | 1.464568e-55 | -8.615850e-47 |
| Msa0189040 | Msa0389390 | 0.802985 | 4.326130e-49 | -8.615850e-47 |
| Msa0190530 | Msa0389390 | 0.825746 | 3.963113e-54 | -8.615850e-47 |
| Msa0197660 | Msa0389390 | 0.815646 | 8.310844e-52 | -8.615850e-47 |
| Msa0201570 | Msa0389390 | 0.805312 | 1.418579e-49 | -8.615850e-47 |
| Msa0204840 | Msa0389390 | 0.808819 | 2.567719e-50 | -8.615850e-47 |
| Msa0205010 | Msa0389390 | 0.807336 | 5.313439e-50 | -8.615850e-47 |
| Msa0215590 | Msa0389390 | 0.808479 | 3.035490e-50 | -8.615850e-47 |
| Msa0217700 | Msa0389390 | 0.831703 | 1.436339e-55 | -8.615850e-47 |
| Msa0225220 | Msa0389390 | 0.805282 | 1.439157e-49 | -8.615850e-47 |
| Msa0231060 | Msa0389390 | 0.814391 | 1.578019e-51 | -8.615850e-47 |
| Msa0365780 | Msa0389390 | 0.800188 | 1.620039e-48 | -8.615850e-47 |
| Msa0369920 | Msa0389390 | 0.813699 | 2.242269e-51 | -8.615850e-47 |
| Msa0371950 | Msa0389390 | 0.818360 | 2.041133e-52 | -8.615850e-47 |
| Msa0381610 | Msa0389390 | -0.804977 | 1.666880e-49 | -8.615850e-47 |
| Msa0387370 | Msa0389390 | 0.811691 | 6.169763e-51 | -8.615850e-47 |
| Msa0389390 | Msa0393620 | 0.811667 | 6.241414e-51 | -8.615850e-47 |
| Msa0389390 | Msa0394470 | 0.820120 | 8.114087e-53 | -8.615850e-47 |
| Msa0389390 | Msa0398200 | 0.817311 | 3.521755e-52 | -8.615850e-47 |
| Msa0389390 | Msa0402180 | 0.805407 | 1.354794e-49 | -8.615850e-47 |
| Msa0389390 | Msa0410580 | 0.810651 | 1.036593e-50 | -8.615850e-47 |
| Msa0389390 | Msa0410860 | 0.801157 | 1.028099e-48 | -8.615850e-47 |
| Msa0389390 | Msa0414140 | 0.806514 | 7.926907e-50 | -8.615850e-47 |
| Msa0389390 | Msa0415420 | 0.800294 | 1.541615e-48 | -8.615850e-47 |
| Msa0389390 | Msa0415980 | 0.810282 | 1.245663e-50 | -8.615850e-47 |
| Msa0389390 | Msa0417330 | 0.841942 | 3.498469e-58 | -8.615850e-47 |
| Msa0389390 | Msa0432160 | 0.801738 | 7.813572e-49 | -8.615850e-47 |
| Msa0389390 | Msa0432670 | 0.801145 | 1.033849e-48 | -8.615850e-47 |
| Msa0389390 | Msa0437400 | 0.805135 | 1.544831e-49 | -8.615850e-47 |
| Msa0389390 | Msa0461790 | 0.801791 | 7.622438e-49 | -8.615850e-47 |
| Msa0389390 | Msa0464100 | 0.820443 | 6.842526e-53 | -8.615850e-47 |
| Msa0389390 | Msa0464120 | 0.807280 | 5.460116e-50 | -8.615850e-47 |
| Msa0389390 | Msa0468320 | 0.832199 | 1.083029e-55 | -8.615850e-47 |
| Msa0389390 | Msa0469940 | -0.809351 | 1.975063e-50 | -8.615850e-47 |
| Msa0389390 | Msa0476680 | 0.804323 | 2.283048e-49 | -8.615850e-47 |
| Msa0389390 | Msa0482180 | 0.819572 | 1.082704e-52 | -8.615850e-47 |
| Msa0389390 | Msa0483800 | 0.812747 | 3.629220e-51 | -8.615850e-47 |
| Msa0389390 | Msa0485490 | 0.837927 | 3.892437e-57 | -8.615850e-47 |
| Msa0389390 | Msa0506860 | 0.817787 | 2.751089e-52 | -8.615850e-47 |
| Msa0389390 | Msa0518380 | 0.830451 | 2.915908e-55 | -8.615850e-47 |
| Msa0389390 | Msa0518440 | 0.819553 | 1.093597e-52 | -8.615850e-47 |
| Msa0389390 | Msa0521010 | 0.805881 | 1.077618e-49 | -8.615850e-47 |
| Msa0389390 | Msa0521670 | 0.810969 | 8.847160e-51 | -8.615850e-47 |
| Msa0389390 | Msa0526070 | -0.807915 | 4.001930e-50 | -8.615850e-47 |
| Msa0389390 | Msa0532930 | 0.939896 | 5.871528e-100 | -8.615850e-47 |
| Msa0389390 | Msa0532960 | 0.803547 | 3.308704e-49 | -8.615850e-47 |
| Msa0389390 | Msa0532980 | 0.803600 | 3.226468e-49 | -8.615850e-47 |
| Msa0389390 | Msa0541040 | 0.809878 | 1.522043e-50 | -8.615850e-47 |
| Msa0389390 | Msa0545700 | 0.801608 | 8.310280e-49 | -8.615850e-47 |
| Msa0389390 | Msa0558370 | 0.815117 | 1.089410e-51 | -8.615850e-47 |
| Msa0389390 | Msa0559500 | 0.808792 | 2.602033e-50 | -8.615850e-47 |
| Msa0389390 | Msa0567340 | 0.803696 | 3.082540e-49 | -8.615850e-47 |
| Msa0389390 | Msa0592180 | 0.810701 | 1.011533e-50 | -8.615850e-47 |
| Msa0389390 | Msa0597000 | 0.805824 | 1.107704e-49 | -8.615850e-47 |
| Msa0389390 | Msa0603370 | 0.807973 | 3.891433e-50 | -8.615850e-47 |
| Msa0389390 | Msa0610130 | 0.822858 | 1.891340e-53 | -8.615850e-47 |
| Msa0389390 | Msa0614920 | 0.815563 | 8.672582e-52 | -8.615850e-47 |
| Msa0389390 | Msa0615010 | 0.808784 | 2.612514e-50 | -8.615850e-47 |
| Msa0389390 | Msa0615220 | 0.806947 | 6.422077e-50 | -8.615850e-47 |
| Msa0389390 | Msa0622170 | -0.804727 | 1.880287e-49 | -8.615850e-47 |
| Msa0389390 | Msa0624960 | 0.971305 | 5.901120e-133 | -8.615850e-47 |
| Msa0389390 | Msa0626850 | 0.803521 | 3.350401e-49 | -8.615850e-47 |
| Msa0389390 | Msa0627350 | 0.800049 | 1.728960e-48 | -8.615850e-47 |
| Msa0389390 | Msa0638350 | 0.810877 | 9.264911e-51 | -8.615850e-47 |
| Msa0389390 | Msa0641730 | 0.819935 | 8.942190e-53 | -8.615850e-47 |
| Msa0389390 | Msa0642730 | 0.807626 | 4.611847e-50 | -8.615850e-47 |
| Msa0389390 | Msa0644400 | 0.821051 | 4.958849e-53 | -8.615850e-47 |
| Msa0389390 | Msa0653440 | 0.800158 | 1.643063e-48 | -8.615850e-47 |
| Msa0389390 | Msa0653660 | 0.814208 | 1.731963e-51 | -8.615850e-47 |
| Msa0389390 | Msa0661320 | 0.820483 | 6.696504e-53 | -8.615850e-47 |
| Msa0389390 | Msa0667740 | 0.875304 | 3.425300e-68 | -8.615850e-47 |
| Msa0389390 | Msa0678130 | 0.822654 | 2.109795e-53 | -8.615850e-47 |
| Msa0389390 | Msa0682090 | 0.808571 | 2.900507e-50 | -8.615850e-47 |
| Msa0389390 | Msa0682140 | 0.810490 | 1.123072e-50 | -8.615850e-47 |
| Msa0389390 | Msa0689780 | 0.838237 | 3.239469e-57 | -8.615850e-47 |
| Msa0389390 | Msa0695870 | 0.818943 | 1.505852e-52 | -8.615850e-47 |
| Msa0389390 | Msa0703780 | 0.801673 | 8.057522e-49 | -8.615850e-47 |
| Msa0389390 | Msa0703910 | 0.803997 | 2.668705e-49 | -8.615850e-47 |
| Msa0389390 | Msa0705190 | 0.806615 | 7.548882e-50 | -8.615850e-47 |
| Msa0389390 | Msa0706400 | 0.806472 | 8.092644e-50 | -8.615850e-47 |
| Msa0389390 | Msa0708310 | 0.803941 | 2.740828e-49 | -8.615850e-47 |
| Msa0389390 | Msa0711150 | 0.844439 | 7.556536e-59 | -8.615850e-47 |
| Msa0389390 | Msa0715410 | 0.866039 | 3.815253e-65 | -8.615850e-47 |
| Msa0389390 | Msa0721340 | 0.800060 | 1.720195e-48 | -8.615850e-47 |
| Msa0389390 | Msa0724480 | 0.800755 | 1.242069e-48 | -8.615850e-47 |
| Msa0389390 | Msa0741070 | 0.814310 | 1.644051e-51 | -8.615850e-47 |
| Msa0389390 | Msa0748070 | 0.804845 | 1.776215e-49 | -8.615850e-47 |
| Msa0389390 | Msa0749440 | 0.853184 | 2.825019e-61 | -8.615850e-47 |
| Msa0389390 | Msa0750850 | 0.819563 | 1.087359e-52 | -8.615850e-47 |
| Msa0389390 | Msa0751850 | 0.844384 | 7.819234e-59 | -8.615850e-47 |
| Msa0389390 | Msa0755050 | 0.803622 | 3.193084e-49 | -8.615850e-47 |
| Msa0389390 | Msa0763890 | 0.811582 | 6.515156e-51 | -8.615850e-47 |
| Msa0389390 | Msa0763920 | 0.825259 | 5.168288e-54 | -8.615850e-47 |
| Msa0389390 | Msa0797250 | 0.804040 | 2.614749e-49 | -8.615850e-47 |
| Msa0389390 | Msa0797770 | 0.821692 | 3.527458e-53 | -8.615850e-47 |
| Msa0389390 | Msa0805960 | 0.815362 | 9.611097e-52 | -8.615850e-47 |
| Msa0389390 | Msa0817460 | 0.829044 | 6.416777e-55 | -8.615850e-47 |
| Msa0389390 | Msa0828660 | 0.807871 | 4.090919e-50 | -8.615850e-47 |
| Msa0389390 | Msa0830230 | 0.829527 | 4.896195e-55 | -8.615850e-47 |
| Msa0389390 | Msa0831850 | 0.817600 | 3.032318e-52 | -8.615850e-47 |
| Msa0389390 | Msa0832090 | 0.807693 | 4.463218e-50 | -8.615850e-47 |
| Msa0389390 | Msa0835230 | 0.816499 | 5.359715e-52 | -8.615850e-47 |
| Msa0389390 | Msa0844110 | 0.827755 | 1.313212e-54 | -8.615850e-47 |
| Msa0389390 | Msa0844320 | 0.800314 | 1.527228e-48 | -8.615850e-47 |
| Msa0389390 | Msa0861470 | 0.819067 | 1.411061e-52 | -8.615850e-47 |
| Msa0389390 | Msa0861570 | 0.808433 | 3.105290e-50 | -8.615850e-47 |
| Msa0389390 | Msa0868160 | 0.819082 | 1.400039e-52 | -8.615850e-47 |
| Msa0389390 | Msa0870060 | 0.806134 | 9.533947e-50 | -8.615850e-47 |
| Msa0389390 | Msa0892570 | 0.801998 | 6.912036e-49 | -8.615850e-47 |
| Msa0389390 | Msa0894710 | 0.818024 | 2.432404e-52 | -8.615850e-47 |
| Msa0389390 | Msa0901320 | 0.806296 | 8.812799e-50 | -8.615850e-47 |
| Msa0389390 | Msa0902830 | 0.830208 | 3.341708e-55 | -8.615850e-47 |
| Msa0389390 | Msa0921420 | 0.808116 | 3.627719e-50 | -8.615850e-47 |
| Msa0389390 | Msa0935770 | 0.818977 | 1.479016e-52 | -8.615850e-47 |
| Msa0389390 | Msa0939110 | 0.810389 | 1.181011e-50 | -8.615850e-47 |
| Msa0389390 | Msa0939250 | 0.823521 | 1.324495e-53 | -8.615850e-47 |
| Msa0389390 | Msa0960390 | 0.805333 | 1.404566e-49 | -8.615850e-47 |
| Msa0389390 | Msa0960740 | 0.823914 | 1.071471e-53 | -8.615850e-47 |
| Msa0389390 | Msa0973600 | 0.804067 | 2.580689e-49 | -8.615850e-47 |
| Msa0389390 | Msa0992600 | 0.812103 | 5.017031e-51 | -8.615850e-47 |
| Msa0389390 | Msa1000150 | 0.806350 | 8.584218e-50 | -8.615850e-47 |
| Msa0389390 | Msa1011090 | 0.807549 | 4.786899e-50 | -8.615850e-47 |
| Msa0389390 | Msa1021510 | 0.804016 | 2.643875e-49 | -8.615850e-47 |
| Msa0389390 | Msa1024680 | 0.801157 | 1.028049e-48 | -8.615850e-47 |
| Msa0389390 | Msa1026940 | 0.812627 | 3.854950e-51 | -8.615850e-47 |
| Msa0389390 | Msa1028590 | 0.823823 | 1.125721e-53 | -8.615850e-47 |
| Msa0389390 | Msa1034500 | 0.818529 | 1.869088e-52 | -8.615850e-47 |
| Msa0389390 | Msa1036610 | 0.800167 | 1.636292e-48 | -8.615850e-47 |
| Msa0389390 | Msa1039710 | -0.814181 | 1.755788e-51 | -8.615850e-47 |
| Msa0389390 | Msa1052330 | 0.813393 | 2.618000e-51 | -8.615850e-47 |
| Msa0389390 | Msa1063400 | 0.806208 | 9.198011e-50 | -8.615850e-47 |
| Msa0389390 | Msa1063420 | 0.821019 | 5.043255e-53 | -8.615850e-47 |
| Msa0389390 | Msa1064250 | 0.809811 | 1.573162e-50 | -8.615850e-47 |
| Msa0389390 | Msa1071320 | 0.809591 | 1.754545e-50 | -8.615850e-47 |
| Msa0389390 | Msa1076960 | 0.824998 | 5.954842e-54 | -8.615850e-47 |
| Msa0389390 | Msa1080960 | 0.802393 | 5.731346e-49 | -8.615850e-47 |
| Msa0389390 | Msa1105500 | 0.809363 | 1.963150e-50 | -8.615850e-47 |
| Msa0389390 | Msa1111870 | 0.819784 | 9.685150e-53 | -8.615850e-47 |
| Msa0389390 | Msa1113010 | 0.805924 | 1.055234e-49 | -8.615850e-47 |
| Msa0389390 | Msa1115280 | 0.825457 | 4.639021e-54 | -8.615850e-47 |
| Msa0389390 | Msa1122860 | 0.815177 | 1.056510e-51 | -8.615850e-47 |
| Msa0389390 | Msa1144720 | -0.811663 | 6.254188e-51 | -8.615850e-47 |
| Msa0389390 | Msa1148980 | 0.808931 | 2.429608e-50 | -8.615850e-47 |
| Msa0389390 | Msa1177780 | 0.820068 | 8.336474e-53 | -8.615850e-47 |
| Msa0389390 | Msa1180500 | 0.800617 | 1.325116e-48 | -8.615850e-47 |
| Msa0389390 | Msa1185110 | 0.819940 | 8.920849e-53 | -8.615850e-47 |
| Msa0389390 | Msa1200250 | 0.823022 | 1.731817e-53 | -8.615850e-47 |
| Msa0389390 | Msa1204630 | 0.800401 | 1.466734e-48 | -8.615850e-47 |
| Msa0389390 | Msa1207310 | 0.811109 | 8.249586e-51 | -8.615850e-47 |
| Msa0389390 | Msa1210910 | 0.805026 | 1.628017e-49 | -8.615850e-47 |
| Msa0389390 | Msa1243870 | 0.815789 | 7.723072e-52 | -8.615850e-47 |
| Msa0389390 | Msa1246360 | 0.803918 | 2.770826e-49 | -8.615850e-47 |
| Msa0389390 | Msa1257800 | -0.820949 | 5.234561e-53 | -8.615850e-47 |
| Msa0389390 | Msa1262750 | 0.808604 | 2.854296e-50 | -8.615850e-47 |
| Msa0389390 | Msa1265280 | 0.805659 | 1.199668e-49 | -8.615850e-47 |
| Msa0389390 | Msa1270660 | 0.831913 | 1.274777e-55 | -8.615850e-47 |
| Msa0389390 | Msa1270730 | 0.821455 | 4.001448e-53 | -8.615850e-47 |
| Msa0389390 | Msa1272610 | 0.803845 | 2.869975e-49 | -8.615850e-47 |
| Msa0389390 | Msa1276340 | 0.821911 | 3.138193e-53 | -8.615850e-47 |
| Msa0389390 | Msa1279480 | 0.800393 | 1.472038e-48 | -8.615850e-47 |
| Msa0389390 | Msa1284900 | 0.801549 | 8.545498e-49 | -8.615850e-47 |
| Msa0389390 | Msa1305350 | 0.821029 | 5.016437e-53 | -8.615850e-47 |
| Msa0389390 | Msa1307550 | 0.808209 | 3.465471e-50 | -8.615850e-47 |
| Msa0389390 | Msa1308870 | 0.800047 | 1.731187e-48 | -8.615850e-47 |
| Msa0389390 | Msa1310440 | 0.815433 | 9.267869e-52 | -8.615850e-47 |
| Msa0389390 | Msa1312520 | 0.807417 | 5.105780e-50 | -8.615850e-47 |
| Msa0389390 | Msa1331080 | 0.802333 | 5.896752e-49 | -8.615850e-47 |
| Msa0389390 | Msa1332050 | 0.824086 | 9.765384e-54 | -8.615850e-47 |
| Msa0389390 | Msa1335230 | 0.805297 | 1.428989e-49 | -8.615850e-47 |
| Msa0389390 | Msa1337480 | 0.803913 | 2.778053e-49 | -8.615850e-47 |
| Msa0389390 | Msa1338400 | 0.814836 | 1.257924e-51 | -8.615850e-47 |
| Msa0389390 | Msa1343250 | 0.800745 | 1.247604e-48 | -8.615850e-47 |
| Msa0389390 | Msa1346840 | 0.803786 | 2.951426e-49 | -8.615850e-47 |
| Msa0389390 | Msa1355890 | 0.816806 | 4.573831e-52 | -8.615850e-47 |
| Msa0389390 | Msa1371940 | 0.850318 | 1.834448e-60 | -8.615850e-47 |
| Msa0389390 | Msa1372150 | 0.862887 | 3.684359e-64 | -8.615850e-47 |
| Msa0389390 | Msa1380220 | 0.829057 | 6.369095e-55 | -8.615850e-47 |
| Msa0389390 | Msa1382790 | 0.838911 | 2.169905e-57 | -8.615850e-47 |
| Msa0389390 | Msa1383100 | 0.816475 | 5.425021e-52 | -8.615850e-47 |
| Msa0389390 | Msa1389880 | 0.802254 | 6.122389e-49 | -8.615850e-47 |
| Msa0389390 | Msa1390690 | 0.810284 | 1.244426e-50 | -8.615850e-47 |
| Msa0389390 | Msa1390700 | 0.814133 | 1.799332e-51 | -8.615850e-47 |
| Msa0389390 | Msa1392900 | 0.805181 | 1.510858e-49 | -8.615850e-47 |
| Msa0389390 | Msa1392910 | 0.805694 | 1.179470e-49 | -8.615850e-47 |
| Msa0389390 | Msa1394310 | 0.834814 | 2.410917e-56 | -8.615850e-47 |
| Msa0389390 | Msa1394380 | 0.804077 | 2.568597e-49 | -8.615850e-47 |
| Msa0389390 | Msa1401460 | 0.820546 | 6.478563e-53 | -8.615850e-47 |
| Msa0389390 | Msa1418280 | 0.809059 | 2.281877e-50 | -8.615850e-47 |
| Msa0389390 | Msa1420270 | 0.846045 | 2.779216e-59 | -8.615850e-47 |
| Msa0389390 | Msa1424630 | 0.808075 | 3.701564e-50 | -8.615850e-47 |
| Msa0389390 | Msa1430550 | 0.808098 | 3.659816e-50 | -8.615850e-47 |
| Msa0389390 | Msa1433350 | 0.800471 | 1.418847e-48 | -8.615850e-47 |
| Msa0389390 | Msa1435400 | 0.800934 | 1.141654e-48 | -8.615850e-47 |
| Msa0389390 | Msa1440940 | 0.800402 | 1.465799e-48 | -8.615850e-47 |
| Msa0389390 | Msa1444260 | 0.819086 | 1.397048e-52 | -8.615850e-47 |
| Msa0389390 | Msa1445390 | -0.808065 | 3.718891e-50 | -8.615850e-47 |
| Msa0389390 | Msa1448560 | 0.822679 | 2.082618e-53 | -8.615850e-47 |
| Msa0389390 | Msa1449340 | -0.801289 | 9.658260e-49 | -8.615850e-47 |
| Msa0389390 | Msa1457160 | 0.840768 | 7.127606e-58 | -8.615850e-47 |
| Msa0389390 | Msa1458340 | 0.807810 | 4.212986e-50 | -8.615850e-47 |
| Msa0389390 | Msa1462360 | 0.838668 | 2.508594e-57 | -8.615850e-47 |
| Msa0239800 | Msa0389390 | 0.816487 | 5.392359e-52 | -8.615850e-47 |
| Msa0241140 | Msa0389390 | 0.839532 | 1.497958e-57 | -8.615850e-47 |
| Msa0244140 | Msa0389390 | 0.821959 | 3.059562e-53 | -8.615850e-47 |
| Msa0244190 | Msa0389390 | 0.825766 | 3.918402e-54 | -8.615850e-47 |
| Msa0247170 | Msa0389390 | 0.801029 | 1.091612e-48 | -8.615850e-47 |
| Msa0257500 | Msa0389390 | 0.814317 | 1.638369e-51 | -8.615850e-47 |
| Msa0259210 | Msa0389390 | 0.811187 | 7.934856e-51 | -8.615850e-47 |
| Msa0259220 | Msa0389390 | 0.815781 | 7.752576e-52 | -8.615850e-47 |
| Msa0269560 | Msa0389390 | 0.814979 | 1.169406e-51 | -8.615850e-47 |
| Msa0271550 | Msa0389390 | 0.811616 | 6.405137e-51 | -8.615850e-47 |
| Msa0277820 | Msa0389390 | 0.802696 | 4.962870e-49 | -8.615850e-47 |
| Msa0282720 | Msa0389390 | 0.814482 | 1.506521e-51 | -8.615850e-47 |
| Msa0292170 | Msa0389390 | 0.811188 | 7.931793e-51 | -8.615850e-47 |
| Msa0296820 | Msa0389390 | 0.814377 | 1.589195e-51 | -8.615850e-47 |
| Msa0307310 | Msa0389390 | 0.810614 | 1.055971e-50 | -8.615850e-47 |
| Msa0308460 | Msa0389390 | 0.833886 | 4.122663e-56 | -8.615850e-47 |
| Msa0317510 | Msa0389390 | 0.815100 | 1.099272e-51 | -8.615850e-47 |
| Msa0319290 | Msa0389390 | 0.803616 | 3.201398e-49 | -8.615850e-47 |
| Msa0322680 | Msa0389390 | 0.818441 | 1.957405e-52 | -8.615850e-47 |
| Msa0333650 | Msa0389390 | 0.814161 | 1.774104e-51 | -8.615850e-47 |
| Msa0336310 | Msa0389390 | 0.818499 | 1.898501e-52 | -8.615850e-47 |
| Msa0336320 | Msa0389390 | 0.810314 | 1.226060e-50 | -8.615850e-47 |
| Msa0340690 | Msa0389390 | 0.818898 | 1.541513e-52 | -8.615850e-47 |
| Msa0340710 | Msa0389390 | 0.824438 | 8.071361e-54 | -8.615850e-47 |
| Msa0342010 | Msa0389390 | 0.811349 | 7.319409e-51 | -8.615850e-47 |
| Msa0344690 | Msa0389390 | -0.804271 | 2.340376e-49 | -8.615850e-47 |
| Msa0347750 | Msa0389390 | 0.826810 | 2.211123e-54 | -8.615850e-47 |
| Msa0357220 | Msa0389390 | 0.800241 | 1.580424e-48 | -8.615850e-47 |
| Msa0357830 | Msa0389390 | 0.811519 | 6.721902e-51 | -8.615850e-47 |
| Msa0357840 | Msa0389390 | 0.804468 | 2.129035e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0389390 | MtrunA17_Chr4g0006261 | 82.671 | 277 | 15 | 2 | 1 | 244 | 1 | 277 | 1.76e-124 | 354 |
| Msa0389390 | MtrunA17_Chr7g0242591 | 64.567 | 254 | 58 | 3 | 22 | 243 | 35 | 288 | 1.55e-79 | 241 |
| Msa0389390 | MtrunA17_Chr5g0409071 | 40.000 | 255 | 104 | 6 | 37 | 243 | 44 | 297 | 1.38e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0389390 | AT2G38250.1 | 47.809 | 251 | 94 | 3 | 30 | 243 | 33 | 283 | 2.26e-45 | 153 |
| Msa0389390 | AT5G01380.1 | 45.833 | 264 | 89 | 5 | 34 | 243 | 47 | 310 | 2.37e-44 | 152 |
Find 45 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGAAATTTGAAGGAAATTT+TGG | 0.071813 | 3_1:+94160830 | Msa0389390:CDS |
| CCAAAATTTCCTTCAAATTT+CGG | 0.218329 | 3_1:-94160830 | None:intergenic |
| GTTTGAAGTTCATTGTAAAA+TGG | 0.240816 | 3_1:-94160609 | None:intergenic |
| GTTGTTGTTGATGTTGTCTT+TGG | 0.290505 | 3_1:-94159143 | None:intergenic |
| AAACTTTCATGGAGACTAAA+AGG | 0.293357 | 3_1:+94159280 | Msa0389390:CDS |
| TGAAAGGAGGTTGAGGGAGA+TGG | 0.392114 | 3_1:+94160920 | Msa0389390:CDS |
| AGAGAATGAGAGGTTATTGA+TGG | 0.399948 | 3_1:+94160968 | Msa0389390:CDS |
| ACGTTGTTGATGTTTCTGAT+AGG | 0.411226 | 3_1:+94159196 | Msa0389390:CDS |
| GGAGCTTGATCAAACTTTCA+TGG | 0.426540 | 3_1:+94159269 | Msa0389390:CDS |
| GAGAGAATGAAAGGAGGTTG+AGG | 0.427005 | 3_1:+94160913 | Msa0389390:CDS |
| AAGTTTCTTCCGAAATTTGA+AGG | 0.436281 | 3_1:+94160821 | Msa0389390:CDS |
| AGAGAATGAAAGGAGGTTGA+GGG | 0.438616 | 3_1:+94160914 | Msa0389390:CDS |
| AAGTGAAGCAGTGTCTCAAA+AGG | 0.452908 | 3_1:+94160743 | Msa0389390:CDS |
| TGGAACACAGATGGAGAGAA+AGG | 0.464080 | 3_1:+94160988 | Msa0389390:CDS |
| GGAGTATAAGAGAAGAAGCT+AGG | 0.465680 | 3_1:+94161021 | Msa0389390:CDS |
| CAAGGATGCAGAGAATGTTA+TGG | 0.477691 | 3_1:+94160643 | Msa0389390:CDS |
| GGAGGTTGAGGGAGATGGAG+TGG | 0.477709 | 3_1:+94160925 | Msa0389390:CDS |
| CTTCATCGTCATCGGTTGAA+AGG | 0.490067 | 3_1:-94160704 | None:intergenic |
| AAGAAGCTAGGGCTGAGAAG+AGG | 0.496506 | 3_1:+94161033 | Msa0389390:CDS |
| AGAAGCTAGGGCTGAGAAGA+GGG | 0.509525 | 3_1:+94161034 | Msa0389390:CDS |
| TAAAAGGAACAAACAATTGT+GGG | 0.514530 | 3_1:+94159296 | Msa0389390:CDS |
| GCAAATTGAAGCACAATGGA+TGG | 0.527054 | 3_1:+94160875 | Msa0389390:CDS |
| GAGTATAAGAGAAGAAGCTA+GGG | 0.529590 | 3_1:+94161022 | Msa0389390:CDS |
| GATGGAGTGGAGACAACAAA+TGG | 0.535582 | 3_1:+94160938 | Msa0389390:CDS |
| TTATGGACTGAAGCTGAAGA+AGG | 0.549188 | 3_1:+94160660 | Msa0389390:CDS |
| GGAGAGAAAGGGAAGAACAA+AGG | 0.557998 | 3_1:+94161000 | Msa0389390:CDS |
| TGGAAGTGTTAGAGAATGAG+AGG | 0.559302 | 3_1:+94160958 | Msa0389390:CDS |
| GGTTATTGATGGAACACAGA+TGG | 0.563742 | 3_1:+94160979 | Msa0389390:CDS |
| TTGAAGCAAGAGAGAATGAA+AGG | 0.568271 | 3_1:+94160904 | Msa0389390:CDS |
| AGTGAAGCAGTGTCTCAAAA+GGG | 0.570275 | 3_1:+94160744 | Msa0389390:CDS |
| ACCATCGTCTTCATCGTCAT+CGG | 0.570363 | 3_1:-94160712 | None:intergenic |
| GGAACACAGATGGAGAGAAA+GGG | 0.577018 | 3_1:+94160989 | Msa0389390:CDS |
| AAGCAAGAGAGAATGAAAGG+AGG | 0.580861 | 3_1:+94160907 | Msa0389390:CDS |
| TGAAGAAGGATCGAAGAAGA+AGG | 0.591569 | 3_1:+94160674 | Msa0389390:CDS |
| AATTGCAAATTGAAGCACAA+TGG | 0.602440 | 3_1:+94160871 | Msa0389390:CDS |
| GTAAAAGGGATGTGAAACAA+TGG | 0.603810 | 3_1:+94160560 | Msa0389390:intron |
| TTTCTGATAGGTTTCCTCAG+TGG | 0.605665 | 3_1:+94159208 | Msa0389390:CDS |
| CTAAAAGGAACAAACAATTG+TGG | 0.626693 | 3_1:+94159295 | Msa0389390:CDS |
| TAACATTCTCTGCATCCTTG+CGG | 0.640458 | 3_1:-94160640 | None:intergenic |
| GTGGAGCATACAAGAGACGA+GGG | 0.645056 | 3_1:+94159227 | Msa0389390:CDS |
| AGTGGAGCATACAAGAGACG+AGG | 0.673401 | 3_1:+94159226 | Msa0389390:CDS |
| GCAAAGATAGGCAACGAAAG+CGG | 0.675281 | 3_1:+94160789 | Msa0389390:CDS |
| GGAGTTTCTGATGATTCGAG+CGG | 0.680605 | 3_1:+94159248 | Msa0389390:CDS |
| ACCGATGACGATGAAGACGA+TGG | 0.696270 | 3_1:+94160711 | Msa0389390:CDS |
| GTCTCTTGTATGCTCCACTG+AGG | 0.764902 | 3_1:-94159222 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTCATATATTTCATATT+TGG | + | chr3_1:94159425-94159444 | Msa0389390:intron | 10.0% |
| !! | ATTAATTAACAATAAGAAAA+GGG | - | chr3_1:94159628-94159647 | None:intergenic | 10.0% |
| !! | AGTAATTAATATAAATTCAT+AGG | - | chr3_1:94160094-94160113 | None:intergenic | 10.0% |
| !! | ATAAAATAGTTAAGATTAAT+TGG | + | chr3_1:94160224-94160243 | Msa0389390:intron | 10.0% |
| !! | TTATTCATATATTTCATATT+TGG | + | chr3_1:94159425-94159444 | Msa0389390:intron | 10.0% |
| !! | ATTAATTAACAATAAGAAAA+GGG | - | chr3_1:94159628-94159647 | None:intergenic | 10.0% |
| !! | AGTAATTAATATAAATTCAT+AGG | - | chr3_1:94160094-94160113 | None:intergenic | 10.0% |
| !! | ATAAAATAGTTAAGATTAAT+TGG | + | chr3_1:94160224-94160243 | Msa0389390:intron | 10.0% |
| !! | GATTAATTAACAATAAGAAA+AGG | - | chr3_1:94159629-94159648 | None:intergenic | 15.0% |
| !! | AAATTTCTTATCAAATAATC+AGG | + | chr3_1:94159748-94159767 | Msa0389390:intron | 15.0% |
| !! | AATTTCTTATCAAATAATCA+GGG | + | chr3_1:94159749-94159768 | Msa0389390:intron | 15.0% |
| !! | TAAATATTGCATTATATAAG+TGG | - | chr3_1:94160035-94160054 | None:intergenic | 15.0% |
| !!! | TAATCTTAACTATTTTATTG+AGG | - | chr3_1:94160222-94160241 | None:intergenic | 15.0% |
| !! | GTGATATAGAAAATTAATAT+CGG | + | chr3_1:94160324-94160343 | Msa0389390:intron | 15.0% |
| !!! | TTTATTTTTTGACATGTAAA+AGG | + | chr3_1:94160545-94160564 | Msa0389390:intron | 15.0% |
| !!! | TTATTTTTTGACATGTAAAA+GGG | + | chr3_1:94160546-94160565 | Msa0389390:intron | 15.0% |
| !! | GATTAATTAACAATAAGAAA+AGG | - | chr3_1:94159629-94159648 | None:intergenic | 15.0% |
| !! | AAATTTCTTATCAAATAATC+AGG | + | chr3_1:94159748-94159767 | Msa0389390:intron | 15.0% |
| !! | AATTTCTTATCAAATAATCA+GGG | + | chr3_1:94159749-94159768 | Msa0389390:intron | 15.0% |
| !! | TAAATATTGCATTATATAAG+TGG | - | chr3_1:94160035-94160054 | None:intergenic | 15.0% |
| !!! | TAATCTTAACTATTTTATTG+AGG | - | chr3_1:94160222-94160241 | None:intergenic | 15.0% |
| !! | GTGATATAGAAAATTAATAT+CGG | + | chr3_1:94160324-94160343 | Msa0389390:intron | 15.0% |
| !!! | TTTATTTTTTGACATGTAAA+AGG | + | chr3_1:94160545-94160564 | Msa0389390:intron | 15.0% |
| !!! | TTATTTTTTGACATGTAAAA+GGG | + | chr3_1:94160546-94160565 | Msa0389390:intron | 15.0% |
| !! | TTAGTCTACTAAATATCATA+AGG | + | chr3_1:94159695-94159714 | Msa0389390:intron | 20.0% |
| !! | TCACAAAATTATCAATAGAA+TGG | - | chr3_1:94160308-94160327 | None:intergenic | 20.0% |
| !! | AAGAAAATAATGATGAGTTT+AGG | - | chr3_1:94160406-94160425 | None:intergenic | 20.0% |
| !!! | ATTTTCTTCATCACAAAATT+TGG | + | chr3_1:94160418-94160437 | Msa0389390:intron | 20.0% |
| !! | TTAGTCTACTAAATATCATA+AGG | + | chr3_1:94159695-94159714 | Msa0389390:intron | 20.0% |
| !! | TCACAAAATTATCAATAGAA+TGG | - | chr3_1:94160308-94160327 | None:intergenic | 20.0% |
| !! | AAGAAAATAATGATGAGTTT+AGG | - | chr3_1:94160406-94160425 | None:intergenic | 20.0% |
| !!! | ATTTTCTTCATCACAAAATT+TGG | + | chr3_1:94160418-94160437 | Msa0389390:intron | 20.0% |
| ! | TAAAAGGAACAAACAATTGT+GGG | + | chr3_1:94159296-94159315 | Msa0389390:CDS | 25.0% |
| ! | ACTTTATGATACTTACAACA+TGG | + | chr3_1:94159941-94159960 | Msa0389390:intron | 25.0% |
| ! | CTTTATGATACTTACAACAT+GGG | + | chr3_1:94159942-94159961 | Msa0389390:intron | 25.0% |
| !! | AGTTAAGATTAATTGGTGTT+TGG | + | chr3_1:94160231-94160250 | Msa0389390:intron | 25.0% |
| ! | ATTAGTGTTAATGTAAGCAA+AGG | + | chr3_1:94160272-94160291 | Msa0389390:intron | 25.0% |
| !! | ATAGGTTTTTATATGTGCTA+AGG | + | chr3_1:94160514-94160533 | Msa0389390:intron | 25.0% |
| !! | TAGGTTTTTATATGTGCTAA+GGG | + | chr3_1:94160515-94160534 | Msa0389390:intron | 25.0% |
| !! | GTTTGAAGTTCATTGTAAAA+TGG | - | chr3_1:94160612-94160631 | None:intergenic | 25.0% |
| ! | AAGAAGAAAAAAGCAAAGAT+AGG | + | chr3_1:94160777-94160796 | Msa0389390:CDS | 25.0% |
| ! | CCAAAATTTCCTTCAAATTT+CGG | - | chr3_1:94160833-94160852 | None:intergenic | 25.0% |
| ! | TAAAAGGAACAAACAATTGT+GGG | + | chr3_1:94159296-94159315 | Msa0389390:CDS | 25.0% |
| ! | ACTTTATGATACTTACAACA+TGG | + | chr3_1:94159941-94159960 | Msa0389390:intron | 25.0% |
| ! | CTTTATGATACTTACAACAT+GGG | + | chr3_1:94159942-94159961 | Msa0389390:intron | 25.0% |
| !! | AGTTAAGATTAATTGGTGTT+TGG | + | chr3_1:94160231-94160250 | Msa0389390:intron | 25.0% |
| ! | ATTAGTGTTAATGTAAGCAA+AGG | + | chr3_1:94160272-94160291 | Msa0389390:intron | 25.0% |
| !! | ATAGGTTTTTATATGTGCTA+AGG | + | chr3_1:94160514-94160533 | Msa0389390:intron | 25.0% |
| !! | TAGGTTTTTATATGTGCTAA+GGG | + | chr3_1:94160515-94160534 | Msa0389390:intron | 25.0% |
| !! | GTTTGAAGTTCATTGTAAAA+TGG | - | chr3_1:94160612-94160631 | None:intergenic | 25.0% |
| ! | AAGAAGAAAAAAGCAAAGAT+AGG | + | chr3_1:94160777-94160796 | Msa0389390:CDS | 25.0% |
| ! | CCAAAATTTCCTTCAAATTT+CGG | - | chr3_1:94160833-94160852 | None:intergenic | 25.0% |
| AAACTTTCATGGAGACTAAA+AGG | + | chr3_1:94159280-94159299 | Msa0389390:CDS | 30.0% | |
| CTAAAAGGAACAAACAATTG+TGG | + | chr3_1:94159295-94159314 | Msa0389390:CDS | 30.0% | |
| ! | AGTTATTTCCAACCATATGA+AGG | + | chr3_1:94159320-94159339 | Msa0389390:intron | 30.0% |
| TGTAAATCATGTATCCAACT+GGG | - | chr3_1:94159540-94159559 | None:intergenic | 30.0% | |
| ATGTAAATCATGTATCCAAC+TGG | - | chr3_1:94159541-94159560 | None:intergenic | 30.0% | |
| CTAATGTTTATCCATATGCT+TGG | - | chr3_1:94159679-94159698 | None:intergenic | 30.0% | |
| AAATATCATAAGGTGTGAAC+TGG | + | chr3_1:94159705-94159724 | Msa0389390:intron | 30.0% | |
| AATATCATAAGGTGTGAACT+GGG | + | chr3_1:94159706-94159725 | Msa0389390:intron | 30.0% | |
| !!! | TTTTCGTTGCATGGTTTTAT+AGG | + | chr3_1:94160496-94160515 | Msa0389390:intron | 30.0% |
| AAGTTTCTTCCGAAATTTGA+AGG | + | chr3_1:94160821-94160840 | Msa0389390:CDS | 30.0% | |
| ! | CCGAAATTTGAAGGAAATTT+TGG | + | chr3_1:94160830-94160849 | Msa0389390:CDS | 30.0% |
| AATTGCAAATTGAAGCACAA+TGG | + | chr3_1:94160871-94160890 | Msa0389390:CDS | 30.0% | |
| AAACTTTCATGGAGACTAAA+AGG | + | chr3_1:94159280-94159299 | Msa0389390:CDS | 30.0% | |
| CTAAAAGGAACAAACAATTG+TGG | + | chr3_1:94159295-94159314 | Msa0389390:CDS | 30.0% | |
| ! | AGTTATTTCCAACCATATGA+AGG | + | chr3_1:94159320-94159339 | Msa0389390:intron | 30.0% |
| TGTAAATCATGTATCCAACT+GGG | - | chr3_1:94159540-94159559 | None:intergenic | 30.0% | |
| ATGTAAATCATGTATCCAAC+TGG | - | chr3_1:94159541-94159560 | None:intergenic | 30.0% | |
| CTAATGTTTATCCATATGCT+TGG | - | chr3_1:94159679-94159698 | None:intergenic | 30.0% | |
| AAATATCATAAGGTGTGAAC+TGG | + | chr3_1:94159705-94159724 | Msa0389390:intron | 30.0% | |
| AATATCATAAGGTGTGAACT+GGG | + | chr3_1:94159706-94159725 | Msa0389390:intron | 30.0% | |
| !!! | TTTTCGTTGCATGGTTTTAT+AGG | + | chr3_1:94160496-94160515 | Msa0389390:intron | 30.0% |
| AAGTTTCTTCCGAAATTTGA+AGG | + | chr3_1:94160821-94160840 | Msa0389390:CDS | 30.0% | |
| ! | CCGAAATTTGAAGGAAATTT+TGG | + | chr3_1:94160830-94160849 | Msa0389390:CDS | 30.0% |
| AATTGCAAATTGAAGCACAA+TGG | + | chr3_1:94160871-94160890 | Msa0389390:CDS | 30.0% | |
| !!! | GTTGTCTTTGGTTTTTGTGA+TGG | - | chr3_1:94159134-94159153 | None:intergenic | 35.0% |
| ! | GTTGTTGTTGATGTTGTCTT+TGG | - | chr3_1:94159146-94159165 | None:intergenic | 35.0% |
| ! | ACGTTGTTGATGTTTCTGAT+AGG | + | chr3_1:94159196-94159215 | Msa0389390:CDS | 35.0% |
| TTCCAACCATATGAAGGAAA+AGG | + | chr3_1:94159326-94159345 | Msa0389390:intron | 35.0% | |
| TCCAACCATATGAAGGAAAA+GGG | + | chr3_1:94159327-94159346 | Msa0389390:intron | 35.0% | |
| AAACCTTGTTACTCGCTATA+AGG | + | chr3_1:94159389-94159408 | Msa0389390:intron | 35.0% | |
| ATACCTTATAGCGAGTAACA+AGG | - | chr3_1:94159395-94159414 | None:intergenic | 35.0% | |
| GTAAATCATGTATCCAACTG+GGG | - | chr3_1:94159539-94159558 | None:intergenic | 35.0% | |
| TCTTATCAAATAATCAGGGC+TGG | + | chr3_1:94159753-94159772 | Msa0389390:intron | 35.0% | |
| ATTCTAAGTCCAAAATCCGA+GGG | - | chr3_1:94159814-94159833 | None:intergenic | 35.0% | |
| TATTCTAAGTCCAAAATCCG+AGG | - | chr3_1:94159815-94159834 | None:intergenic | 35.0% | |
| ACTTTGTCATGAAGCAAAGA+TGG | + | chr3_1:94159908-94159927 | Msa0389390:intron | 35.0% | |
| CTAAAACACGCTACAATATG+AGG | - | chr3_1:94160130-94160149 | None:intergenic | 35.0% | |
| ! | CTCATATTGTAGCGTGTTTT+AGG | + | chr3_1:94160128-94160147 | Msa0389390:intron | 35.0% |
| TTTAGGCCTCAAAATGTGTT+AGG | + | chr3_1:94160145-94160164 | Msa0389390:intron | 35.0% | |
| ! | CTTCATCACAAAATTTGGTG+AGG | + | chr3_1:94160423-94160442 | Msa0389390:intron | 35.0% |
| ! | GAGTTAAGATTTTCGTTGCA+TGG | + | chr3_1:94160487-94160506 | Msa0389390:intron | 35.0% |
| ! | GTTTTTATATGTGCTAAGGG+TGG | + | chr3_1:94160518-94160537 | Msa0389390:intron | 35.0% |
| GTAAAAGGGATGTGAAACAA+TGG | + | chr3_1:94160560-94160579 | Msa0389390:intron | 35.0% | |
| ! | TTCAAACAATTTTCACCGCA+AGG | + | chr3_1:94160625-94160644 | Msa0389390:CDS | 35.0% |
| TTGAAGCAAGAGAGAATGAA+AGG | + | chr3_1:94160904-94160923 | Msa0389390:CDS | 35.0% | |
| AGAGAATGAGAGGTTATTGA+TGG | + | chr3_1:94160968-94160987 | Msa0389390:CDS | 35.0% | |
| GAGTATAAGAGAAGAAGCTA+GGG | + | chr3_1:94161022-94161041 | Msa0389390:CDS | 35.0% | |
| !!! | GTTGTCTTTGGTTTTTGTGA+TGG | - | chr3_1:94159134-94159153 | None:intergenic | 35.0% |
| ! | GTTGTTGTTGATGTTGTCTT+TGG | - | chr3_1:94159146-94159165 | None:intergenic | 35.0% |
| ! | ACGTTGTTGATGTTTCTGAT+AGG | + | chr3_1:94159196-94159215 | Msa0389390:CDS | 35.0% |
| TTCCAACCATATGAAGGAAA+AGG | + | chr3_1:94159326-94159345 | Msa0389390:intron | 35.0% | |
| TCCAACCATATGAAGGAAAA+GGG | + | chr3_1:94159327-94159346 | Msa0389390:intron | 35.0% | |
| AAACCTTGTTACTCGCTATA+AGG | + | chr3_1:94159389-94159408 | Msa0389390:intron | 35.0% | |
| ATACCTTATAGCGAGTAACA+AGG | - | chr3_1:94159395-94159414 | None:intergenic | 35.0% | |
| GTAAATCATGTATCCAACTG+GGG | - | chr3_1:94159539-94159558 | None:intergenic | 35.0% | |
| TCTTATCAAATAATCAGGGC+TGG | + | chr3_1:94159753-94159772 | Msa0389390:intron | 35.0% | |
| ATTCTAAGTCCAAAATCCGA+GGG | - | chr3_1:94159814-94159833 | None:intergenic | 35.0% | |
| TATTCTAAGTCCAAAATCCG+AGG | - | chr3_1:94159815-94159834 | None:intergenic | 35.0% | |
| ACTTTGTCATGAAGCAAAGA+TGG | + | chr3_1:94159908-94159927 | Msa0389390:intron | 35.0% | |
| CTAAAACACGCTACAATATG+AGG | - | chr3_1:94160130-94160149 | None:intergenic | 35.0% | |
| ! | CTCATATTGTAGCGTGTTTT+AGG | + | chr3_1:94160128-94160147 | Msa0389390:intron | 35.0% |
| TTTAGGCCTCAAAATGTGTT+AGG | + | chr3_1:94160145-94160164 | Msa0389390:intron | 35.0% | |
| ! | CTTCATCACAAAATTTGGTG+AGG | + | chr3_1:94160423-94160442 | Msa0389390:intron | 35.0% |
| ! | GAGTTAAGATTTTCGTTGCA+TGG | + | chr3_1:94160487-94160506 | Msa0389390:intron | 35.0% |
| ! | GTTTTTATATGTGCTAAGGG+TGG | + | chr3_1:94160518-94160537 | Msa0389390:intron | 35.0% |
| GTAAAAGGGATGTGAAACAA+TGG | + | chr3_1:94160560-94160579 | Msa0389390:intron | 35.0% | |
| ! | TTCAAACAATTTTCACCGCA+AGG | + | chr3_1:94160625-94160644 | Msa0389390:CDS | 35.0% |
| TTGAAGCAAGAGAGAATGAA+AGG | + | chr3_1:94160904-94160923 | Msa0389390:CDS | 35.0% | |
| AGAGAATGAGAGGTTATTGA+TGG | + | chr3_1:94160968-94160987 | Msa0389390:CDS | 35.0% | |
| GAGTATAAGAGAAGAAGCTA+GGG | + | chr3_1:94161022-94161041 | Msa0389390:CDS | 35.0% | |
| TTTCTGATAGGTTTCCTCAG+TGG | + | chr3_1:94159208-94159227 | Msa0389390:CDS | 40.0% | |
| GGAGCTTGATCAAACTTTCA+TGG | + | chr3_1:94159269-94159288 | Msa0389390:CDS | 40.0% | |
| ! | ACCCTTTTCCTTCATATGGT+TGG | - | chr3_1:94159331-94159350 | None:intergenic | 40.0% |
| ! | GGTAACCCTTTTCCTTCATA+TGG | - | chr3_1:94159335-94159354 | None:intergenic | 40.0% |
| TACACTGTTCTGCACTTCTA+TGG | - | chr3_1:94159356-94159375 | None:intergenic | 40.0% | |
| TATGATCTAAGTTCCCCAGT+TGG | + | chr3_1:94159523-94159542 | Msa0389390:intron | 40.0% | |
| AAATTGTCACGCCAAGCATA+TGG | + | chr3_1:94159665-94159684 | Msa0389390:intron | 40.0% | |
| TGCAACATTATTTGCAGTGC+CGG | - | chr3_1:94160171-94160190 | None:intergenic | 40.0% | |
| TAACATTCTCTGCATCCTTG+CGG | - | chr3_1:94160643-94160662 | None:intergenic | 40.0% | |
| CAAGGATGCAGAGAATGTTA+TGG | + | chr3_1:94160643-94160662 | Msa0389390:CDS | 40.0% | |
| ! | TTATGGACTGAAGCTGAAGA+AGG | + | chr3_1:94160660-94160679 | Msa0389390:CDS | 40.0% |
| TGAAGAAGGATCGAAGAAGA+AGG | + | chr3_1:94160674-94160693 | Msa0389390:CDS | 40.0% | |
| AAGTGAAGCAGTGTCTCAAA+AGG | + | chr3_1:94160743-94160762 | Msa0389390:CDS | 40.0% | |
| AGTGAAGCAGTGTCTCAAAA+GGG | + | chr3_1:94160744-94160763 | Msa0389390:CDS | 40.0% | |
| GCAAATTGAAGCACAATGGA+TGG | + | chr3_1:94160875-94160894 | Msa0389390:CDS | 40.0% | |
| AAGCAAGAGAGAATGAAAGG+AGG | + | chr3_1:94160907-94160926 | Msa0389390:CDS | 40.0% | |
| AGAGAATGAAAGGAGGTTGA+GGG | + | chr3_1:94160914-94160933 | Msa0389390:CDS | 40.0% | |
| !! | TGGAAGTGTTAGAGAATGAG+AGG | + | chr3_1:94160958-94160977 | Msa0389390:CDS | 40.0% |
| GGTTATTGATGGAACACAGA+TGG | + | chr3_1:94160979-94160998 | Msa0389390:CDS | 40.0% | |
| GGAGTATAAGAGAAGAAGCT+AGG | + | chr3_1:94161021-94161040 | Msa0389390:CDS | 40.0% | |
| TTTCTGATAGGTTTCCTCAG+TGG | + | chr3_1:94159208-94159227 | Msa0389390:CDS | 40.0% | |
| GGAGCTTGATCAAACTTTCA+TGG | + | chr3_1:94159269-94159288 | Msa0389390:CDS | 40.0% | |
| ! | ACCCTTTTCCTTCATATGGT+TGG | - | chr3_1:94159331-94159350 | None:intergenic | 40.0% |
| ! | GGTAACCCTTTTCCTTCATA+TGG | - | chr3_1:94159335-94159354 | None:intergenic | 40.0% |
| TACACTGTTCTGCACTTCTA+TGG | - | chr3_1:94159356-94159375 | None:intergenic | 40.0% | |
| TATGATCTAAGTTCCCCAGT+TGG | + | chr3_1:94159523-94159542 | Msa0389390:intron | 40.0% | |
| AAATTGTCACGCCAAGCATA+TGG | + | chr3_1:94159665-94159684 | Msa0389390:intron | 40.0% | |
| TGCAACATTATTTGCAGTGC+CGG | - | chr3_1:94160171-94160190 | None:intergenic | 40.0% | |
| TAACATTCTCTGCATCCTTG+CGG | - | chr3_1:94160643-94160662 | None:intergenic | 40.0% | |
| CAAGGATGCAGAGAATGTTA+TGG | + | chr3_1:94160643-94160662 | Msa0389390:CDS | 40.0% | |
| ! | TTATGGACTGAAGCTGAAGA+AGG | + | chr3_1:94160660-94160679 | Msa0389390:CDS | 40.0% |
| TGAAGAAGGATCGAAGAAGA+AGG | + | chr3_1:94160674-94160693 | Msa0389390:CDS | 40.0% | |
| AAGTGAAGCAGTGTCTCAAA+AGG | + | chr3_1:94160743-94160762 | Msa0389390:CDS | 40.0% | |
| AGTGAAGCAGTGTCTCAAAA+GGG | + | chr3_1:94160744-94160763 | Msa0389390:CDS | 40.0% | |
| GCAAATTGAAGCACAATGGA+TGG | + | chr3_1:94160875-94160894 | Msa0389390:CDS | 40.0% | |
| AAGCAAGAGAGAATGAAAGG+AGG | + | chr3_1:94160907-94160926 | Msa0389390:CDS | 40.0% | |
| AGAGAATGAAAGGAGGTTGA+GGG | + | chr3_1:94160914-94160933 | Msa0389390:CDS | 40.0% | |
| !! | TGGAAGTGTTAGAGAATGAG+AGG | + | chr3_1:94160958-94160977 | Msa0389390:CDS | 40.0% |
| GGTTATTGATGGAACACAGA+TGG | + | chr3_1:94160979-94160998 | Msa0389390:CDS | 40.0% | |
| GGAGTATAAGAGAAGAAGCT+AGG | + | chr3_1:94161021-94161040 | Msa0389390:CDS | 40.0% | |
| GGAGTTTCTGATGATTCGAG+CGG | + | chr3_1:94159248-94159267 | Msa0389390:CDS | 45.0% | |
| CAGAACAGTGTAAGTGCAAG+TGG | + | chr3_1:94159364-94159383 | Msa0389390:intron | 45.0% | |
| !! | AAATAATCAGGGCTGGCCTA+AGG | + | chr3_1:94159760-94159779 | Msa0389390:intron | 45.0% |
| !! | AATAATCAGGGCTGGCCTAA+GGG | + | chr3_1:94159761-94159780 | Msa0389390:intron | 45.0% |
| ! | CTTCATCGTCATCGGTTGAA+AGG | - | chr3_1:94160707-94160726 | None:intergenic | 45.0% |
| ACCATCGTCTTCATCGTCAT+CGG | - | chr3_1:94160715-94160734 | None:intergenic | 45.0% | |
| GCAAAGATAGGCAACGAAAG+CGG | + | chr3_1:94160789-94160808 | Msa0389390:CDS | 45.0% | |
| GAGAGAATGAAAGGAGGTTG+AGG | + | chr3_1:94160913-94160932 | Msa0389390:CDS | 45.0% | |
| GATGGAGTGGAGACAACAAA+TGG | + | chr3_1:94160938-94160957 | Msa0389390:CDS | 45.0% | |
| TGGAACACAGATGGAGAGAA+AGG | + | chr3_1:94160988-94161007 | Msa0389390:CDS | 45.0% | |
| GGAACACAGATGGAGAGAAA+GGG | + | chr3_1:94160989-94161008 | Msa0389390:CDS | 45.0% | |
| GGAGAGAAAGGGAAGAACAA+AGG | + | chr3_1:94161000-94161019 | Msa0389390:CDS | 45.0% | |
| GGAGTTTCTGATGATTCGAG+CGG | + | chr3_1:94159248-94159267 | Msa0389390:CDS | 45.0% | |
| CAGAACAGTGTAAGTGCAAG+TGG | + | chr3_1:94159364-94159383 | Msa0389390:intron | 45.0% | |
| !! | AAATAATCAGGGCTGGCCTA+AGG | + | chr3_1:94159760-94159779 | Msa0389390:intron | 45.0% |
| !! | AATAATCAGGGCTGGCCTAA+GGG | + | chr3_1:94159761-94159780 | Msa0389390:intron | 45.0% |
| ! | CTTCATCGTCATCGGTTGAA+AGG | - | chr3_1:94160707-94160726 | None:intergenic | 45.0% |
| ACCATCGTCTTCATCGTCAT+CGG | - | chr3_1:94160715-94160734 | None:intergenic | 45.0% | |
| GCAAAGATAGGCAACGAAAG+CGG | + | chr3_1:94160789-94160808 | Msa0389390:CDS | 45.0% | |
| GAGAGAATGAAAGGAGGTTG+AGG | + | chr3_1:94160913-94160932 | Msa0389390:CDS | 45.0% | |
| GATGGAGTGGAGACAACAAA+TGG | + | chr3_1:94160938-94160957 | Msa0389390:CDS | 45.0% | |
| TGGAACACAGATGGAGAGAA+AGG | + | chr3_1:94160988-94161007 | Msa0389390:CDS | 45.0% | |
| GGAACACAGATGGAGAGAAA+GGG | + | chr3_1:94160989-94161008 | Msa0389390:CDS | 45.0% | |
| GGAGAGAAAGGGAAGAACAA+AGG | + | chr3_1:94161000-94161019 | Msa0389390:CDS | 45.0% | |
| GTCTCTTGTATGCTCCACTG+AGG | - | chr3_1:94159225-94159244 | None:intergenic | 50.0% | |
| AGTGGAGCATACAAGAGACG+AGG | + | chr3_1:94159226-94159245 | Msa0389390:CDS | 50.0% | |
| GTGGAGCATACAAGAGACGA+GGG | + | chr3_1:94159227-94159246 | Msa0389390:CDS | 50.0% | |
| GCTTGGATTGCCTTACCCTT+AGG | - | chr3_1:94159779-94159798 | None:intergenic | 50.0% | |
| GGCCTCAAAATGTGTTAGGC+CGG | + | chr3_1:94160149-94160168 | Msa0389390:intron | 50.0% | |
| ! | TGCCGGCCTAACACATTTTG+AGG | - | chr3_1:94160154-94160173 | None:intergenic | 50.0% |
| ACCGATGACGATGAAGACGA+TGG | + | chr3_1:94160711-94160730 | Msa0389390:CDS | 50.0% | |
| TGAAAGGAGGTTGAGGGAGA+TGG | + | chr3_1:94160920-94160939 | Msa0389390:CDS | 50.0% | |
| AAGAAGCTAGGGCTGAGAAG+AGG | + | chr3_1:94161033-94161052 | Msa0389390:CDS | 50.0% | |
| AGAAGCTAGGGCTGAGAAGA+GGG | + | chr3_1:94161034-94161053 | Msa0389390:CDS | 50.0% | |
| GTCTCTTGTATGCTCCACTG+AGG | - | chr3_1:94159225-94159244 | None:intergenic | 50.0% | |
| AGTGGAGCATACAAGAGACG+AGG | + | chr3_1:94159226-94159245 | Msa0389390:CDS | 50.0% | |
| GTGGAGCATACAAGAGACGA+GGG | + | chr3_1:94159227-94159246 | Msa0389390:CDS | 50.0% | |
| GCTTGGATTGCCTTACCCTT+AGG | - | chr3_1:94159779-94159798 | None:intergenic | 50.0% | |
| GGCCTCAAAATGTGTTAGGC+CGG | + | chr3_1:94160149-94160168 | Msa0389390:intron | 50.0% | |
| ! | TGCCGGCCTAACACATTTTG+AGG | - | chr3_1:94160154-94160173 | None:intergenic | 50.0% |
| ACCGATGACGATGAAGACGA+TGG | + | chr3_1:94160711-94160730 | Msa0389390:CDS | 50.0% | |
| TGAAAGGAGGTTGAGGGAGA+TGG | + | chr3_1:94160920-94160939 | Msa0389390:CDS | 50.0% | |
| AAGAAGCTAGGGCTGAGAAG+AGG | + | chr3_1:94161033-94161052 | Msa0389390:CDS | 50.0% | |
| AGAAGCTAGGGCTGAGAAGA+GGG | + | chr3_1:94161034-94161053 | Msa0389390:CDS | 50.0% | |
| GCAATCCAAGCCCTCGCTTT+AGG | + | chr3_1:94159788-94159807 | Msa0389390:intron | 55.0% | |
| AATCCGAGGGCCTAAAGCGA+GGG | - | chr3_1:94159801-94159820 | None:intergenic | 55.0% | |
| AAATCCGAGGGCCTAAAGCG+AGG | - | chr3_1:94159802-94159821 | None:intergenic | 55.0% | |
| !! | CGCTTTAGGCCCTCGGATTT+TGG | + | chr3_1:94159802-94159821 | Msa0389390:intron | 55.0% |
| TTCCGCCAGTGCTGCACTTA+CGG | + | chr3_1:94160004-94160023 | Msa0389390:intron | 55.0% | |
| GCAATCCAAGCCCTCGCTTT+AGG | + | chr3_1:94159788-94159807 | Msa0389390:intron | 55.0% | |
| AATCCGAGGGCCTAAAGCGA+GGG | - | chr3_1:94159801-94159820 | None:intergenic | 55.0% | |
| AAATCCGAGGGCCTAAAGCG+AGG | - | chr3_1:94159802-94159821 | None:intergenic | 55.0% | |
| !! | CGCTTTAGGCCCTCGGATTT+TGG | + | chr3_1:94159802-94159821 | Msa0389390:intron | 55.0% |
| TTCCGCCAGTGCTGCACTTA+CGG | + | chr3_1:94160004-94160023 | Msa0389390:intron | 55.0% | |
| !! | TCAGGGCTGGCCTAAGGGTA+AGG | + | chr3_1:94159766-94159785 | Msa0389390:intron | 60.0% |
| ! | AAGCCCTCGCTTTAGGCCCT+CGG | + | chr3_1:94159795-94159814 | Msa0389390:intron | 60.0% |
| ! | AAGCGCCGTAAGTGCAGCAC+TGG | - | chr3_1:94160012-94160031 | None:intergenic | 60.0% |
| GGAGGTTGAGGGAGATGGAG+TGG | + | chr3_1:94160925-94160944 | Msa0389390:CDS | 60.0% | |
| !! | TCAGGGCTGGCCTAAGGGTA+AGG | + | chr3_1:94159766-94159785 | Msa0389390:intron | 60.0% |
| ! | AAGCCCTCGCTTTAGGCCCT+CGG | + | chr3_1:94159795-94159814 | Msa0389390:intron | 60.0% |
| ! | AAGCGCCGTAAGTGCAGCAC+TGG | - | chr3_1:94160012-94160031 | None:intergenic | 60.0% |
| GGAGGTTGAGGGAGATGGAG+TGG | + | chr3_1:94160925-94160944 | Msa0389390:CDS | 60.0% | |
| GAGGGCCTAAAGCGAGGGCT+TGG | - | chr3_1:94159796-94159815 | None:intergenic | 65.0% | |
| ! | CGCCGTAAGTGCAGCACTGG+CGG | - | chr3_1:94160009-94160028 | None:intergenic | 65.0% |
| GAGGGCCTAAAGCGAGGGCT+TGG | - | chr3_1:94159796-94159815 | None:intergenic | 65.0% | |
| ! | CGCCGTAAGTGCAGCACTGG+CGG | - | chr3_1:94160009-94160028 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 94159114 | 94161094 | 94159114 | ID=Msa0389390;Name=Msa0389390 |
| chr3_1 | mRNA | 94159114 | 94161094 | 94159114 | ID=Msa0389390-mRNA-1;Parent=Msa0389390;Name=Msa0389390-mRNA-1;_AED=0.07;_eAED=0.08;_QI=0|0|0|1|0|0|2|0|244 |
| chr3_1 | exon | 94159114 | 94159320 | 94159114 | ID=Msa0389390-mRNA-1:exon:26700;Parent=Msa0389390-mRNA-1 |
| chr3_1 | exon | 94160567 | 94161094 | 94160567 | ID=Msa0389390-mRNA-1:exon:26701;Parent=Msa0389390-mRNA-1 |
| chr3_1 | CDS | 94159114 | 94159320 | 94159114 | ID=Msa0389390-mRNA-1:cds;Parent=Msa0389390-mRNA-1 |
| chr3_1 | CDS | 94160567 | 94161094 | 94160567 | ID=Msa0389390-mRNA-1:cds;Parent=Msa0389390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
