Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284220 | XP_013445314.1 | 97.635 | 296 | 7 | 0 | 1 | 296 | 1 | 296 | 0.0 | 605 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284220 | sp|Q9QWZ1|RAD1_MOUSE | 26.403 | 303 | 182 | 12 | 1 | 293 | 4 | 275 | 6.09e-23 | 98.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284220 | A0A072U0N1 | 97.635 | 296 | 7 | 0 | 1 | 296 | 1 | 296 | 0.0 | 605 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012040 | Msa1284220 | 0.817784 | 2.755633e-52 | -8.615850e-47 |
| Msa0040450 | Msa1284220 | 0.816965 | 4.212673e-52 | -8.615850e-47 |
| Msa0111310 | Msa1284220 | 0.819940 | 8.919926e-53 | -8.615850e-47 |
| Msa0119850 | Msa1284220 | 0.810369 | 1.192576e-50 | -8.615850e-47 |
| Msa0621490 | Msa1284220 | 0.801238 | 9.893430e-49 | -8.615850e-47 |
| Msa0638280 | Msa1284220 | 0.837355 | 5.458603e-57 | -8.615850e-47 |
| Msa0638320 | Msa1284220 | 0.831586 | 1.534785e-55 | -8.615850e-47 |
| Msa0657050 | Msa1284220 | 0.801710 | 7.919284e-49 | -8.615850e-47 |
| Msa0657970 | Msa1284220 | 0.803469 | 3.434620e-49 | -8.615850e-47 |
| Msa0672120 | Msa1284220 | 0.821897 | 3.161783e-53 | -8.615850e-47 |
| Msa0677270 | Msa1284220 | 0.834280 | 3.283768e-56 | -8.615850e-47 |
| Msa0795920 | Msa1284220 | 0.828311 | 9.647680e-55 | -8.615850e-47 |
| Msa0824680 | Msa1284220 | 0.810423 | 1.161234e-50 | -8.615850e-47 |
| Msa0143140 | Msa1284220 | -0.822317 | 2.527552e-53 | -8.615850e-47 |
| Msa0165220 | Msa1284220 | 0.801467 | 8.882522e-49 | -8.615850e-47 |
| Msa0225000 | Msa1284220 | 0.816746 | 4.717420e-52 | -8.615850e-47 |
| Msa0226890 | Msa1284220 | 0.803592 | 3.239650e-49 | -8.615850e-47 |
| Msa0230770 | Msa1284220 | 0.814619 | 1.404596e-51 | -8.615850e-47 |
| Msa1233500 | Msa1284220 | 0.818850 | 1.580342e-52 | -8.615850e-47 |
| Msa1233890 | Msa1284220 | 0.825235 | 5.235740e-54 | -8.615850e-47 |
| Msa1233910 | Msa1284220 | 0.824196 | 9.202158e-54 | -8.615850e-47 |
| Msa1247250 | Msa1284220 | 0.800195 | 1.615344e-48 | -8.615850e-47 |
| Msa1261470 | Msa1284220 | 0.803476 | 3.423927e-49 | -8.615850e-47 |
| Msa1264020 | Msa1284220 | 0.812260 | 4.637395e-51 | -8.615850e-47 |
| Msa1267060 | Msa1284220 | 0.802946 | 4.406937e-49 | -8.615850e-47 |
| Msa1279210 | Msa1284220 | 0.833542 | 5.022658e-56 | -8.615850e-47 |
| Msa1281180 | Msa1284220 | 0.829300 | 5.560617e-55 | -8.615850e-47 |
| Msa1283860 | Msa1284220 | 0.810371 | 1.191482e-50 | -8.615850e-47 |
| Msa1284220 | Msa1288420 | 0.802497 | 5.455131e-49 | -8.615850e-47 |
| Msa1284220 | Msa1297090 | 0.829930 | 3.907651e-55 | -8.615850e-47 |
| Msa1284220 | Msa1304180 | 0.801065 | 1.073609e-48 | -8.615850e-47 |
| Msa1284220 | Msa1328700 | 0.819990 | 8.685635e-53 | -8.615850e-47 |
| Msa1284220 | Msa1351620 | 0.819820 | 9.502242e-53 | -8.615850e-47 |
| Msa1284220 | Msa1357530 | 0.813766 | 2.168235e-51 | -8.615850e-47 |
| Msa1284220 | Msa1367080 | 0.806534 | 7.852506e-50 | -8.615850e-47 |
| Msa1284220 | Msa1371430 | 0.807623 | 4.618048e-50 | -8.615850e-47 |
| Msa1284220 | Msa1411070 | 0.811415 | 7.083060e-51 | -8.615850e-47 |
| Msa1284220 | Msa1415640 | 0.809559 | 1.782060e-50 | -8.615850e-47 |
| Msa1284220 | Msa1419800 | -0.805712 | 1.169112e-49 | -8.615850e-47 |
| Msa1284220 | Msa1426030 | 0.812589 | 3.930158e-51 | -8.615850e-47 |
| Msa1284220 | Msa1427760 | 0.806620 | 7.530090e-50 | -8.615850e-47 |
| Msa1284220 | Msa1427830 | 0.812802 | 3.530042e-51 | -8.615850e-47 |
| Msa1284220 | Msa1454120 | 0.819347 | 1.218227e-52 | -8.615850e-47 |
| Msa1284220 | Msa1458550 | 0.818285 | 2.123103e-52 | -8.615850e-47 |
| Msa0371570 | Msa1284220 | 0.801640 | 8.183772e-49 | -8.615850e-47 |
| Msa0373930 | Msa1284220 | 0.809167 | 2.163571e-50 | -8.615850e-47 |
| Msa0379640 | Msa1284220 | 0.802852 | 4.609482e-49 | -8.615850e-47 |
| Msa0398710 | Msa1284220 | 0.804994 | 1.653535e-49 | -8.615850e-47 |
| Msa0417040 | Msa1284220 | 0.807650 | 4.556566e-50 | -8.615850e-47 |
| Msa0432770 | Msa1284220 | 0.823341 | 1.459283e-53 | -8.615850e-47 |
| Msa0442850 | Msa1284220 | 0.802197 | 6.288606e-49 | -8.615850e-47 |
| Msa0457880 | Msa1284220 | 0.801433 | 9.025426e-49 | -8.615850e-47 |
| Msa0466390 | Msa1284220 | 0.801535 | 8.599402e-49 | -8.615850e-47 |
| Msa0992490 | Msa1284220 | -0.802876 | 4.555952e-49 | -8.615850e-47 |
| Msa1023400 | Msa1284220 | 0.801130 | 1.041029e-48 | -8.615850e-47 |
| Msa1037700 | Msa1284220 | -0.801750 | 7.772325e-49 | -8.615850e-47 |
| Msa1082500 | Msa1284220 | 0.824632 | 7.267142e-54 | -8.615850e-47 |
| Msa0265380 | Msa1284220 | 0.804501 | 2.095968e-49 | -8.615850e-47 |
| Msa0270270 | Msa1284220 | 0.815140 | 1.077000e-51 | -8.615850e-47 |
| Msa0279790 | Msa1284220 | 0.810832 | 9.475324e-51 | -8.615850e-47 |
| Msa0294960 | Msa1284220 | 0.802400 | 5.712865e-49 | -8.615850e-47 |
| Msa0333720 | Msa1284220 | -0.800885 | 1.168344e-48 | -8.615850e-47 |
| Msa0350990 | Msa1284220 | 0.811577 | 6.529544e-51 | -8.615850e-47 |
| Msa0351030 | Msa1284220 | 0.811206 | 7.863001e-51 | -8.615850e-47 |
| Msa0351100 | Msa1284220 | 0.800445 | 1.436216e-48 | -8.615850e-47 |
| Msa0358170 | Msa1284220 | 0.810995 | 8.736002e-51 | -8.615850e-47 |
| Msa1111630 | Msa1284220 | 0.809932 | 1.481536e-50 | -8.615850e-47 |
| Msa1132890 | Msa1284220 | 0.806718 | 7.179720e-50 | -8.615850e-47 |
| Msa1194920 | Msa1284220 | 0.818963 | 1.489783e-52 | -8.615850e-47 |
| Msa1199560 | Msa1284220 | 0.816269 | 6.033908e-52 | -8.615850e-47 |
| Msa1203250 | Msa1284220 | 0.811060 | 8.455041e-51 | -8.615850e-47 |
| Msa1204980 | Msa1284220 | -0.804524 | 2.073276e-49 | -8.615850e-47 |
| Msa1205010 | Msa1284220 | -0.809438 | 1.892193e-50 | -8.615850e-47 |
| Msa1222970 | Msa1284220 | 0.809022 | 2.323779e-50 | -8.615850e-47 |
| Msa0484780 | Msa1284220 | 0.804883 | 1.744015e-49 | -8.615850e-47 |
| Msa0500360 | Msa1284220 | 0.825392 | 4.805540e-54 | -8.615850e-47 |
| Msa0501460 | Msa1284220 | 0.800865 | 1.179118e-48 | -8.615850e-47 |
| Msa0517330 | Msa1284220 | 0.805287 | 1.435653e-49 | -8.615850e-47 |
| Msa0540070 | Msa1284220 | 0.809715 | 1.649863e-50 | -8.615850e-47 |
| Msa0580420 | Msa1284220 | 0.807782 | 4.271577e-50 | -8.615850e-47 |
| Msa0593650 | Msa1284220 | 0.800039 | 1.737309e-48 | -8.615850e-47 |
| Msa0845590 | Msa1284220 | -0.816026 | 6.837752e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284220 | MtrunA17_Chr8g0356441 | 97.635 | 296 | 7 | 0 | 1 | 296 | 1 | 296 | 0.0 | 605 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284220 | AT4G17760.1 | 69.966 | 293 | 87 | 1 | 4 | 296 | 9 | 300 | 6.01e-162 | 452 |
| Msa1284220 | AT4G17760.2 | 68.280 | 186 | 58 | 1 | 111 | 296 | 1 | 185 | 4.37e-93 | 274 |
Find 93 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACCATTCTTCTCAGTTT+TGG | 0.234742 | 8_3:-26291018 | None:intergenic |
| TTCAAATAATTTCAAGTAAC+TGG | 0.235391 | 8_3:+26286793 | Msa1284220:five_prime_UTR |
| GTTATTATTAGGTAGAATTA+AGG | 0.239418 | 8_3:+26290954 | Msa1284220:three_prime_UTR |
| GTACATACTCAGGATGAAAT+TGG | 0.247406 | 8_3:+26291097 | Msa1284220:three_prime_UTR |
| CCCTTTGACCTTTACTGTTC+AGG | 0.268886 | 8_3:+26289531 | Msa1284220:CDS |
| CTAAATGAATTGTTATTATT+AGG | 0.270480 | 8_3:+26290943 | Msa1284220:exon |
| TGAGAGGTAGGTTTGGAAAT+TGG | 0.274187 | 8_3:-26290836 | None:intergenic |
| TAGTTCCATGCAACGGTATC+AGG | 0.279409 | 8_3:-26289484 | None:intergenic |
| TGCAATGACACTTAATTATC+TGG | 0.329000 | 8_3:-26291152 | None:intergenic |
| GCTATGTAAGGAAAATTATA+AGG | 0.352972 | 8_3:-26290987 | None:intergenic |
| TCTGATCTCTGCACAAATAC+TGG | 0.365082 | 8_3:-26289452 | None:intergenic |
| AGTGTCATTGCACGGGAAAT+AGG | 0.367111 | 8_3:+26291163 | Msa1284220:three_prime_UTR |
| TTGAGGAGAAGCTGCATATC+AGG | 0.368769 | 8_3:-26287281 | None:intergenic |
| GATCTGGCTCCATAGTTATC+TGG | 0.370914 | 8_3:-26290383 | None:intergenic |
| GCAGAGGGACGACCTCGTTT+TGG | 0.389300 | 8_3:+26287173 | Msa1284220:CDS |
| TTGGTTTGAAAAGCTATGTA+AGG | 0.397877 | 8_3:-26290999 | None:intergenic |
| CATCCATTTCTGACATGGTC+AGG | 0.409585 | 8_3:-26286854 | None:intergenic |
| TCCAGTTCGCATAGAACGTC+TGG | 0.414965 | 8_3:-26286885 | None:intergenic |
| CATCCTGACCATGTCAGAAA+TGG | 0.418409 | 8_3:+26286851 | Msa1284220:exon |
| GATTAAAACGATGCCGTGTT+CGG | 0.419468 | 8_3:-26286982 | None:intergenic |
| ATCAAGCATCCAGATAACTA+TGG | 0.424375 | 8_3:+26290374 | Msa1284220:CDS |
| ATTTAGTCTTCACTTTCCTC+AGG | 0.432864 | 8_3:-26290926 | None:intergenic |
| TTTCCATCGAACGGCGGTTA+AGG | 0.447252 | 8_3:-26286931 | None:intergenic |
| GCCTTAGTCTGCAGCACTAA+AGG | 0.450575 | 8_3:+26290323 | Msa1284220:intron |
| GTTATTCAGATTCAGTATCC+TGG | 0.465773 | 8_3:+26287257 | Msa1284220:CDS |
| TACATACTCAGGATGAAATT+GGG | 0.477291 | 8_3:+26291098 | Msa1284220:three_prime_UTR |
| TTCTTCATCCATTTCTGACA+TGG | 0.480238 | 8_3:-26286859 | None:intergenic |
| CTTCAGATCTGTAGATTCGC+TGG | 0.480426 | 8_3:+26289426 | Msa1284220:intron |
| AGATCAAGCAAGTTAAGCAT+TGG | 0.483178 | 8_3:+26290779 | Msa1284220:CDS |
| AATCTATGACGGCGTCTTGG+TGG | 0.483711 | 8_3:-26286956 | None:intergenic |
| ATAAGGGTGAGAGGTAGGTT+TGG | 0.483989 | 8_3:-26290843 | None:intergenic |
| CACCCTTATGTCGATTCTGC+CGG | 0.484742 | 8_3:+26290857 | Msa1284220:CDS |
| CAAACCAAAACTGAGAAGAA+TGG | 0.487296 | 8_3:+26291014 | Msa1284220:three_prime_UTR |
| TGGCAAACACACGAGGTGTA+TGG | 0.490723 | 8_3:-26291132 | None:intergenic |
| GATCAAGCAAGTTAAGCATT+GGG | 0.491010 | 8_3:+26290780 | Msa1284220:CDS |
| AACGTAACAGAAGGAGGATC+TGG | 0.492844 | 8_3:-26290399 | None:intergenic |
| ATAAATCTATGACGGCGTCT+TGG | 0.497839 | 8_3:-26286959 | None:intergenic |
| AATGTTAAAAGTGCAGCATC+TGG | 0.503568 | 8_3:+26290811 | Msa1284220:CDS |
| CCTGAACAGTAAAGGTCAAA+GGG | 0.505595 | 8_3:-26289531 | None:intergenic |
| CTGAAATGCTACCAAGAGTT+CGG | 0.505766 | 8_3:-26290570 | None:intergenic |
| ATTGAGGATCTTGAATGGCC+TGG | 0.506692 | 8_3:+26290351 | Msa1284220:CDS |
| TGAAGGACATGGGGACCTGC+AGG | 0.506864 | 8_3:+26290428 | Msa1284220:CDS |
| TAGCCGGCAGAATCGACATA+AGG | 0.508799 | 8_3:-26290860 | None:intergenic |
| TAGCATTTCAGTGTGATCAC+CGG | 0.508883 | 8_3:+26290582 | Msa1284220:CDS |
| ACCAGACGTTCTATGCGAAC+TGG | 0.510099 | 8_3:+26286884 | Msa1284220:CDS |
| TCGACCAGGTTGTTGATAGC+CGG | 0.513509 | 8_3:-26290876 | None:intergenic |
| AACTAATGAATTAACATGCA+TGG | 0.513552 | 8_3:-26291294 | None:intergenic |
| GTTATCTGGATGCTTGATCC+AGG | 0.519897 | 8_3:-26290369 | None:intergenic |
| ATGGCATACCTGAACAGTAA+AGG | 0.520495 | 8_3:-26289539 | None:intergenic |
| AGCCGGCAGAATCGACATAA+GGG | 0.521551 | 8_3:-26290859 | None:intergenic |
| AAGTGGTTGTCTTCAAGCAA+AGG | 0.524384 | 8_3:+26287013 | Msa1284220:CDS |
| GATAATTAAGTGTCATTGCA+CGG | 0.526146 | 8_3:+26291155 | Msa1284220:three_prime_UTR |
| AGCACTAAAGGAAGCTATTG+AGG | 0.528126 | 8_3:+26290335 | Msa1284220:CDS |
| ACCTGAACAGTAAAGGTCAA+AGG | 0.531404 | 8_3:-26289532 | None:intergenic |
| TTGGTGGCGTTTCCATCGAA+CGG | 0.531867 | 8_3:-26286940 | None:intergenic |
| ACGTTGCGAGCTGAAGGACA+TGG | 0.533667 | 8_3:+26290417 | Msa1284220:CDS |
| ACGCCTTAACCGCCGTTCGA+TGG | 0.534279 | 8_3:+26286928 | Msa1284220:CDS |
| TCTGTTACGTTGCGAGCTGA+AGG | 0.535332 | 8_3:+26290411 | Msa1284220:CDS |
| GTCAAAGGGTTAGTCCCAGC+AGG | 0.538849 | 8_3:-26289517 | None:intergenic |
| TTGTGCGAATTCCGAACTCT+TGG | 0.553644 | 8_3:+26290559 | Msa1284220:CDS |
| ATAATTAAGTGTCATTGCAC+GGG | 0.562610 | 8_3:+26291156 | Msa1284220:three_prime_UTR |
| TGCGAACTGGAAAACGTACA+AGG | 0.564049 | 8_3:+26286897 | Msa1284220:CDS |
| AGCATTTCAGTGTGATCACC+GGG | 0.564504 | 8_3:+26290583 | Msa1284220:CDS |
| AAGTTAAGCATTGGGAGAAG+TGG | 0.580030 | 8_3:+26290788 | Msa1284220:CDS |
| AAGCTATTGAGGATCTTGAA+TGG | 0.582081 | 8_3:+26290346 | Msa1284220:CDS |
| ATTAATACTTGAAAGAAGCC+CGG | 0.583729 | 8_3:-26290601 | None:intergenic |
| TCGACATAAGGGTGAGAGGT+AGG | 0.585971 | 8_3:-26290848 | None:intergenic |
| TGAATTCTTTGTGAAACCTG+AGG | 0.592342 | 8_3:+26290910 | Msa1284220:CDS |
| CGTTGCGAGCTGAAGGACAT+GGG | 0.595246 | 8_3:+26290418 | Msa1284220:CDS |
| AAAATTGTAGTTCCATGCAA+CGG | 0.602010 | 8_3:-26289491 | None:intergenic |
| TCAATATGAGCTATTCGACC+AGG | 0.602194 | 8_3:-26290890 | None:intergenic |
| AGAAGCTGCATATCAGGACC+AGG | 0.605824 | 8_3:-26287275 | None:intergenic |
| GGATTCCTGATACCGTTGCA+TGG | 0.607368 | 8_3:+26289479 | Msa1284220:CDS |
| ATAAGACAAAGTACATACTC+AGG | 0.607730 | 8_3:+26291087 | Msa1284220:three_prime_UTR |
| CGATATGATTACAATGCAGA+GGG | 0.614216 | 8_3:+26287158 | Msa1284220:CDS |
| TCTACTTCATGTCAATGTAG+TGG | 0.617891 | 8_3:-26291222 | None:intergenic |
| GCTCGCAACGTAACAGAAGG+AGG | 0.623848 | 8_3:-26290405 | None:intergenic |
| TCAGCTCGCAACGTAACAGA+AGG | 0.626160 | 8_3:-26290408 | None:intergenic |
| TCGATATGATTACAATGCAG+AGG | 0.627505 | 8_3:+26287157 | Msa1284220:CDS |
| GATTGTAGAGAACGAACAGA+GGG | 0.634508 | 8_3:+26286825 | Msa1284220:five_prime_UTR |
| AGAATCGACATAAGGGTGAG+AGG | 0.646036 | 8_3:-26290852 | None:intergenic |
| GTCATAGATTTATCCGAACA+CGG | 0.660479 | 8_3:+26286969 | Msa1284220:CDS |
| TATTAGAAGTTGATGCTCTG+AGG | 0.660938 | 8_3:-26290730 | None:intergenic |
| AGATTGTAGAGAACGAACAG+AGG | 0.665090 | 8_3:+26286824 | Msa1284220:five_prime_UTR |
| TGAATAACACCAGAATGACC+CGG | 0.677975 | 8_3:-26287242 | None:intergenic |
| GTGGCGTTTCCATCGAACGG+CGG | 0.678873 | 8_3:-26286937 | None:intergenic |
| TCTGCCGGCTATCAACAACC+TGG | 0.681187 | 8_3:+26290872 | Msa1284220:CDS |
| GTGTTCGGATAAATCTATGA+CGG | 0.681623 | 8_3:-26286967 | None:intergenic |
| AATTATCTGGCAAACACACG+AGG | 0.684814 | 8_3:-26291139 | None:intergenic |
| GTTGCGAGCTGAAGGACATG+GGG | 0.701488 | 8_3:+26290419 | Msa1284220:CDS |
| CCTAAACTTACACCAAAACG+AGG | 0.709031 | 8_3:-26287185 | None:intergenic |
| TTTGTGCAGAGATCAGAACA+AGG | 0.733824 | 8_3:+26289458 | Msa1284220:CDS |
| TTAAATGATGTATTTCACTG+TGG | 0.782563 | 8_3:+26291194 | Msa1284220:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTGAAGAAGAAAAT+GGG | - | chr8_3:26287068-26287087 | None:intergenic | 15.0% |
| !! | AATAAAATTGAAGAAGAAAA+TGG | - | chr8_3:26287069-26287088 | None:intergenic | 15.0% |
| !!! | TATATTTTGTGTATTTGAAT+GGG | - | chr8_3:26287337-26287356 | None:intergenic | 15.0% |
| !!! | TATAACTTTTACTAAAATCA+CGG | - | chr8_3:26287415-26287434 | None:intergenic | 15.0% |
| !! | ACTGTTAAATTAAAATTGTA+AGG | - | chr8_3:26288003-26288022 | None:intergenic | 15.0% |
| !! | ACCAAAATGAAATAAAATAT+TGG | + | chr8_3:26288228-26288247 | Msa1284220:intron | 15.0% |
| !! | ATAAAACAAATATGATATAG+AGG | - | chr8_3:26288543-26288562 | None:intergenic | 15.0% |
| !!! | CTAAATGAATTGTTATTATT+AGG | + | chr8_3:26290943-26290962 | Msa1284220:exon | 15.0% |
| !!! | TTCAAATAATTTCAAGTAAC+TGG | + | chr8_3:26286793-26286812 | Msa1284220:five_prime_UTR | 20.0% |
| !!! | CTATATTTTGTGTATTTGAA+TGG | - | chr8_3:26287338-26287357 | None:intergenic | 20.0% |
| !!! | TACATTTTTATATTACAACG+CGG | + | chr8_3:26287362-26287381 | Msa1284220:intron | 20.0% |
| !!! | GCCAATATTTTATTTCATTT+TGG | - | chr8_3:26288232-26288251 | None:intergenic | 20.0% |
| !! | AATGAAATAAAATATTGGCA+AGG | + | chr8_3:26288233-26288252 | Msa1284220:intron | 20.0% |
| !!! | GTATATTGTTTTTACTCTTT+GGG | - | chr8_3:26288615-26288634 | None:intergenic | 20.0% |
| !!! | AGTATATTGTTTTTACTCTT+TGG | - | chr8_3:26288616-26288635 | None:intergenic | 20.0% |
| !!! | AGCTATAAATGACAATTTTA+TGG | - | chr8_3:26288829-26288848 | None:intergenic | 20.0% |
| !! | TCAAATTAATGGTCATTTAT+TGG | + | chr8_3:26289326-26289345 | Msa1284220:intron | 20.0% |
| !!! | TAAATCCAAAATTTTGTAGA+AGG | - | chr8_3:26289663-26289682 | None:intergenic | 20.0% |
| !! | TGAACATCTATAAATTCATA+AGG | + | chr8_3:26290222-26290241 | Msa1284220:intron | 20.0% |
| !!! | AACCATTGAATCATTTTAAT+TGG | + | chr8_3:26290263-26290282 | Msa1284220:intron | 20.0% |
| !!! | ACCATTGAATCATTTTAATT+GGG | + | chr8_3:26290264-26290283 | Msa1284220:intron | 20.0% |
| !! | AATATAATGAATTCAAAGTG+CGG | - | chr8_3:26290502-26290521 | None:intergenic | 20.0% |
| !! | GTTATTATTAGGTAGAATTA+AGG | + | chr8_3:26290954-26290973 | Msa1284220:three_prime_UTR | 20.0% |
| ! | AAAGGTTTATCTCAAAAAAG+AGG | + | chr8_3:26287031-26287050 | Msa1284220:CDS | 25.0% |
| ! | AAGAAGAAAATGGGATTATT+TGG | - | chr8_3:26287059-26287078 | None:intergenic | 25.0% |
| ! | AAAGAAAGAACAATGAGAAT+TGG | - | chr8_3:26287092-26287111 | None:intergenic | 25.0% |
| ! | AAAAAGTTAGAACATACTTG+AGG | - | chr8_3:26287301-26287320 | None:intergenic | 25.0% |
| ! | CAAAATTATAGCGATGATTT+AGG | + | chr8_3:26287449-26287468 | Msa1284220:intron | 25.0% |
| ! | TAATCTACTTCTATAGCAAA+AGG | + | chr8_3:26287561-26287580 | Msa1284220:intron | 25.0% |
| ! | CTCAAATAAGTCAATCAAAA+CGG | + | chr8_3:26287680-26287699 | Msa1284220:intron | 25.0% |
| ! | TCAAATAAGTCAATCAAAAC+GGG | + | chr8_3:26287681-26287700 | Msa1284220:intron | 25.0% |
| ! | ATATAGATCCTTATTGGAAA+TGG | - | chr8_3:26288153-26288172 | None:intergenic | 25.0% |
| ! | TTCAACATATAGATCCTTAT+TGG | - | chr8_3:26288159-26288178 | None:intergenic | 25.0% |
| ! | AAGGATCTATATGTTGAATT+AGG | + | chr8_3:26288161-26288180 | Msa1284220:intron | 25.0% |
| !!! | ATGATTTGCTTTATTATCTG+AGG | + | chr8_3:26288564-26288583 | Msa1284220:intron | 25.0% |
| ! | TGGGCAAAATATTAATAGAA+GGG | - | chr8_3:26288707-26288726 | None:intergenic | 25.0% |
| ! | GAAAACTAATTAGATGTAGA+AGG | - | chr8_3:26289179-26289198 | None:intergenic | 25.0% |
| ! | TGAAATCCAATAGAATTTGT+CGG | + | chr8_3:26289248-26289267 | Msa1284220:intron | 25.0% |
| ! | TTAATGTGATAGTTCAATGA+TGG | + | chr8_3:26289680-26289699 | Msa1284220:intron | 25.0% |
| ! | TCATTCAACCATTATATTAC+TGG | + | chr8_3:26289749-26289768 | Msa1284220:intron | 25.0% |
| ! | ACTAGTAACCAGTAATATAA+TGG | - | chr8_3:26289760-26289779 | None:intergenic | 25.0% |
| !! | CAAACAACTTTTCATATAAG+TGG | + | chr8_3:26290145-26290164 | Msa1284220:intron | 25.0% |
| ! | TCCCAATTAAAATGATTCAA+TGG | - | chr8_3:26290268-26290287 | None:intergenic | 25.0% |
| !!! | TTTTCTTTGATAACACTACT+AGG | - | chr8_3:26290758-26290777 | None:intergenic | 25.0% |
| ! | GCTATGTAAGGAAAATTATA+AGG | - | chr8_3:26290990-26291009 | None:intergenic | 25.0% |
| ! | TTAAATGATGTATTTCACTG+TGG | + | chr8_3:26291194-26291213 | Msa1284220:three_prime_UTR | 25.0% |
| ! | AACTAATGAATTAACATGCA+TGG | - | chr8_3:26291297-26291316 | None:intergenic | 25.0% |
| !! | GTTTTAATCGTTGAAGAAAG+TGG | + | chr8_3:26286996-26287015 | Msa1284220:CDS | 30.0% |
| TAAGTCCATATATGGAATGA+CGG | - | chr8_3:26287487-26287506 | None:intergenic | 30.0% | |
| ATAAGCCATTTATCCAAACA+GGG | - | chr8_3:26287512-26287531 | None:intergenic | 30.0% | |
| AATAAGCCATTTATCCAAAC+AGG | - | chr8_3:26287513-26287532 | None:intergenic | 30.0% | |
| CACAGTTCCAAATATACTAA+GGG | - | chr8_3:26287707-26287726 | None:intergenic | 30.0% | |
| TGTCAAGTATAAAGTAGTTC+CGG | + | chr8_3:26287828-26287847 | Msa1284220:intron | 30.0% | |
| TGAACTGTCTGATTAAGTTT+AGG | + | chr8_3:26287953-26287972 | Msa1284220:intron | 30.0% | |
| TTGCCTATAGTAGATTGAAA+TGG | - | chr8_3:26288375-26288394 | None:intergenic | 30.0% | |
| !! | TTTACTCTTTGGGTTGATAT+AGG | - | chr8_3:26288605-26288624 | None:intergenic | 30.0% |
| TATTAATAGAAGGGTCTACA+AGG | - | chr8_3:26288698-26288717 | None:intergenic | 30.0% | |
| GTGGGCAAAATATTAATAGA+AGG | - | chr8_3:26288708-26288727 | None:intergenic | 30.0% | |
| CACTGCTTACTATATAAGAA+CGG | - | chr8_3:26288790-26288809 | None:intergenic | 30.0% | |
| TATAGTAAGCAGTGTATTGA+TGG | + | chr8_3:26288796-26288815 | Msa1284220:intron | 30.0% | |
| CTATCAGTGTTGTCAAATAT+TGG | - | chr8_3:26288944-26288963 | None:intergenic | 30.0% | |
| !! | ATTTTTCAACTACTCATGTG+TGG | - | chr8_3:26289007-26289026 | None:intergenic | 30.0% |
| CTTCATTGATAGGTATTTAG+AGG | - | chr8_3:26289053-26289072 | None:intergenic | 30.0% | |
| TTTCTTGATACTCGATATCA+GGG | - | chr8_3:26289080-26289099 | None:intergenic | 30.0% | |
| ATTTCTTGATACTCGATATC+AGG | - | chr8_3:26289081-26289100 | None:intergenic | 30.0% | |
| GAATTTGTGACTGTCATAAA+TGG | - | chr8_3:26289109-26289128 | None:intergenic | 30.0% | |
| AAAGTTCCGACAAATTCTAT+TGG | - | chr8_3:26289257-26289276 | None:intergenic | 30.0% | |
| TAAACAAAACTTCCACAGAA+TGG | + | chr8_3:26289300-26289319 | Msa1284220:intron | 30.0% | |
| ! | TTAATTTGACTACCATTCTG+TGG | - | chr8_3:26289315-26289334 | None:intergenic | 30.0% |
| CAGAATGGTAGTCAAATTAA+TGG | + | chr8_3:26289315-26289334 | Msa1284220:intron | 30.0% | |
| AAAATTGTAGTTCCATGCAA+CGG | - | chr8_3:26289494-26289513 | None:intergenic | 30.0% | |
| ! | TGCAACGGTAAAGAATTTTA+TGG | - | chr8_3:26289561-26289580 | None:intergenic | 30.0% |
| AATAATGACCTAGTATCCTT+TGG | + | chr8_3:26289586-26289605 | Msa1284220:intron | 30.0% | |
| ! | GATAGTTCAATGATGGAAAT+TGG | + | chr8_3:26289687-26289706 | Msa1284220:intron | 30.0% |
| GAAAAACCATTGCTTGTATA+CGG | + | chr8_3:26290011-26290030 | Msa1284220:intron | 30.0% | |
| ! | ATTTGAAATTTGAGCCAAAC+TGG | + | chr8_3:26290301-26290320 | Msa1284220:intron | 30.0% |
| ATTAATACTTGAAAGAAGCC+CGG | - | chr8_3:26290604-26290623 | None:intergenic | 30.0% | |
| ! | ATATGTCATTTCGTTGCTTA+TGG | + | chr8_3:26290683-26290702 | Msa1284220:intron | 30.0% |
| ! | TTGGTTTGAAAAGCTATGTA+AGG | - | chr8_3:26291002-26291021 | None:intergenic | 30.0% |
| ! | TATACCATTCTTCTCAGTTT+TGG | - | chr8_3:26291021-26291040 | None:intergenic | 30.0% |
| ATAAGACAAAGTACATACTC+AGG | + | chr8_3:26291087-26291106 | Msa1284220:three_prime_UTR | 30.0% | |
| TACATACTCAGGATGAAATT+GGG | + | chr8_3:26291098-26291117 | Msa1284220:three_prime_UTR | 30.0% | |
| TGCAATGACACTTAATTATC+TGG | - | chr8_3:26291155-26291174 | None:intergenic | 30.0% | |
| ! | GATAATTAAGTGTCATTGCA+CGG | + | chr8_3:26291155-26291174 | Msa1284220:three_prime_UTR | 30.0% |
| ! | ATAATTAAGTGTCATTGCAC+GGG | + | chr8_3:26291156-26291175 | Msa1284220:three_prime_UTR | 30.0% |
| TTCTTCATCCATTTCTGACA+TGG | - | chr8_3:26286862-26286881 | None:intergenic | 35.0% | |
| GTGTTCGGATAAATCTATGA+CGG | - | chr8_3:26286970-26286989 | None:intergenic | 35.0% | |
| GTCATAGATTTATCCGAACA+CGG | + | chr8_3:26286969-26286988 | Msa1284220:CDS | 35.0% | |
| TCGATATGATTACAATGCAG+AGG | + | chr8_3:26287157-26287176 | Msa1284220:CDS | 35.0% | |
| CGATATGATTACAATGCAGA+GGG | + | chr8_3:26287158-26287177 | Msa1284220:CDS | 35.0% | |
| ! | TGATTGTTTGAACGCGTTTT+CGG | + | chr8_3:26287217-26287236 | Msa1284220:CDS | 35.0% |
| GTTATTCAGATTCAGTATCC+TGG | + | chr8_3:26287257-26287276 | Msa1284220:CDS | 35.0% | |
| TTACTAAAATCACGGTGACA+CGG | - | chr8_3:26287407-26287426 | None:intergenic | 35.0% | |
| AATCACCGTCATTCCATATA+TGG | + | chr8_3:26287479-26287498 | Msa1284220:intron | 35.0% | |
| TTAAGCCCTGTTTGGATAAA+TGG | + | chr8_3:26287504-26287523 | Msa1284220:intron | 35.0% | |
| CCACAGTTCCAAATATACTA+AGG | - | chr8_3:26287708-26287727 | None:intergenic | 35.0% | |
| ! | CCTTAGTATATTTGGAACTG+TGG | + | chr8_3:26287705-26287724 | Msa1284220:intron | 35.0% |
| ATAGGTAACCAAGCAACTAA+CGG | - | chr8_3:26287782-26287801 | None:intergenic | 35.0% | |
| ! | AGTTGCTTGGTTACCTATTT+TGG | + | chr8_3:26287784-26287803 | Msa1284220:intron | 35.0% |
| ! | TGAGTGTTTGGAACCAAAAT+AGG | - | chr8_3:26287800-26287819 | None:intergenic | 35.0% |
| GACAGTTTATAGTGAGTGTT+TGG | - | chr8_3:26287812-26287831 | None:intergenic | 35.0% | |
| CAAGTTAGTGTAGCAACTTT+AGG | - | chr8_3:26287855-26287874 | None:intergenic | 35.0% | |
| ! | GTTTAGGCGATTTGAAATGT+TGG | + | chr8_3:26287969-26287988 | Msa1284220:intron | 35.0% |
| TGCGTACATGACATTCAATA+TGG | + | chr8_3:26288100-26288119 | Msa1284220:intron | 35.0% | |
| TGTGCTTTCCATTTCCAATA+AGG | + | chr8_3:26288142-26288161 | Msa1284220:intron | 35.0% | |
| GTACACATCTTTACACAAGA+TGG | + | chr8_3:26288301-26288320 | Msa1284220:intron | 35.0% | |
| ! | CTGCCATTTCAATCTACTAT+AGG | + | chr8_3:26288369-26288388 | Msa1284220:intron | 35.0% |
| ! | GTGTTTATAGGGAAGGTTTT+TGG | + | chr8_3:26288441-26288460 | Msa1284220:intron | 35.0% |
| TAATGTACGAGAAGTGAGAA+AGG | - | chr8_3:26288735-26288754 | None:intergenic | 35.0% | |
| TTTCTCACTTCTCGTACATT+AGG | + | chr8_3:26288734-26288753 | Msa1284220:intron | 35.0% | |
| !!! | AGATTTTTTGAGAACTGCCA+TGG | - | chr8_3:26288901-26288920 | None:intergenic | 35.0% |
| ! | AATTTGACTTAAACCGTGAC+AGG | - | chr8_3:26289142-26289161 | None:intergenic | 35.0% |
| AATCTACAGATCTGAAGATG+TGG | - | chr8_3:26289423-26289442 | None:intergenic | 35.0% | |
| ! | AACTACAATTTTGAACCTGC+TGG | + | chr8_3:26289502-26289521 | Msa1284220:CDS | 35.0% |
| ! | ACTACAATTTTGAACCTGCT+GGG | + | chr8_3:26289503-26289522 | Msa1284220:CDS | 35.0% |
| ! | AGGGTCCTTCTACAAAATTT+TGG | + | chr8_3:26289655-26289674 | Msa1284220:intron | 35.0% |
| GTGCTGTGCAGTAAAAAATT+TGG | + | chr8_3:26289849-26289868 | Msa1284220:intron | 35.0% | |
| CTGTGCAGTAAAAAATTTGG+AGG | + | chr8_3:26289852-26289871 | Msa1284220:intron | 35.0% | |
| AGTTAACCGTATACAAGCAA+TGG | - | chr8_3:26290020-26290039 | None:intergenic | 35.0% | |
| AATTACACCTAGAGCTAGTT+TGG | + | chr8_3:26290056-26290075 | Msa1284220:intron | 35.0% | |
| ! | AGTTTATCCAAACTAGCTCT+AGG | - | chr8_3:26290066-26290085 | None:intergenic | 35.0% |
| AAGCTATTGAGGATCTTGAA+TGG | + | chr8_3:26290346-26290365 | Msa1284220:CDS | 35.0% | |
| ATCAAGCATCCAGATAACTA+TGG | + | chr8_3:26290374-26290393 | Msa1284220:CDS | 35.0% | |
| TGTATTGCTTTCGACTCAAA+TGG | + | chr8_3:26290453-26290472 | Msa1284220:intron | 35.0% | |
| GTATTGCTTTCGACTCAAAT+GGG | + | chr8_3:26290454-26290473 | Msa1284220:intron | 35.0% | |
| CGAAATGACATATAAGTCGA+TGG | - | chr8_3:26290676-26290695 | None:intergenic | 35.0% | |
| TCGTTGCTTATGGTTATAAC+AGG | + | chr8_3:26290693-26290712 | Msa1284220:intron | 35.0% | |
| !! | TATTAGAAGTTGATGCTCTG+AGG | - | chr8_3:26290733-26290752 | None:intergenic | 35.0% |
| AGATCAAGCAAGTTAAGCAT+TGG | + | chr8_3:26290779-26290798 | Msa1284220:CDS | 35.0% | |
| GATCAAGCAAGTTAAGCATT+GGG | + | chr8_3:26290780-26290799 | Msa1284220:CDS | 35.0% | |
| ! | AATGTTAAAAGTGCAGCATC+TGG | + | chr8_3:26290811-26290830 | Msa1284220:CDS | 35.0% |
| TGAATTCTTTGTGAAACCTG+AGG | + | chr8_3:26290910-26290929 | Msa1284220:CDS | 35.0% | |
| ! | ATTTAGTCTTCACTTTCCTC+AGG | - | chr8_3:26290929-26290948 | None:intergenic | 35.0% |
| CAAACCAAAACTGAGAAGAA+TGG | + | chr8_3:26291014-26291033 | Msa1284220:three_prime_UTR | 35.0% | |
| GTACATACTCAGGATGAAAT+TGG | + | chr8_3:26291097-26291116 | Msa1284220:three_prime_UTR | 35.0% | |
| TCTACTTCATGTCAATGTAG+TGG | - | chr8_3:26291225-26291244 | None:intergenic | 35.0% | |
| AGATTGTAGAGAACGAACAG+AGG | + | chr8_3:26286824-26286843 | Msa1284220:five_prime_UTR | 40.0% | |
| GATTGTAGAGAACGAACAGA+GGG | + | chr8_3:26286825-26286844 | Msa1284220:five_prime_UTR | 40.0% | |
| ATAAATCTATGACGGCGTCT+TGG | - | chr8_3:26286962-26286981 | None:intergenic | 40.0% | |
| GATTAAAACGATGCCGTGTT+CGG | - | chr8_3:26286985-26287004 | None:intergenic | 40.0% | |
| AAGTGGTTGTCTTCAAGCAA+AGG | + | chr8_3:26287013-26287032 | Msa1284220:CDS | 40.0% | |
| CCTAAACTTACACCAAAACG+AGG | - | chr8_3:26287188-26287207 | None:intergenic | 40.0% | |
| !! | CCTCGTTTTGGTGTAAGTTT+AGG | + | chr8_3:26287185-26287204 | Msa1284220:CDS | 40.0% |
| TGAATAACACCAGAATGACC+CGG | - | chr8_3:26287245-26287264 | None:intergenic | 40.0% | |
| TACTAAAATCACGGTGACAC+GGG | - | chr8_3:26287406-26287425 | None:intergenic | 40.0% | |
| ACAGGGCTTAAGTCCATATA+TGG | - | chr8_3:26287495-26287514 | None:intergenic | 40.0% | |
| ATATGGACTTAAGCCCTGTT+TGG | + | chr8_3:26287496-26287515 | Msa1284220:intron | 40.0% | |
| AAACGGGCCCTTAGTATATT+TGG | + | chr8_3:26287697-26287716 | Msa1284220:intron | 40.0% | |
| ! | TGATTTTGTGTCTCGAGACA+GGG | + | chr8_3:26287728-26287747 | Msa1284220:intron | 40.0% |
| !! | TAGTGTAGCAACTTTAGGAC+CGG | - | chr8_3:26287850-26287869 | None:intergenic | 40.0% |
| TGTCATGTACGCAACTTGTA+TGG | - | chr8_3:26288093-26288112 | None:intergenic | 40.0% | |
| TTAGGTAGTTGAGACTTGAC+AGG | + | chr8_3:26288179-26288198 | Msa1284220:intron | 40.0% | |
| TAGTTGAGACTTGACAGGTT+TGG | + | chr8_3:26288184-26288203 | Msa1284220:intron | 40.0% | |
| AATCCCCATGAATTTGTAGC+TGG | + | chr8_3:26288259-26288278 | Msa1284220:intron | 40.0% | |
| CATCCAGCTACAAATTCATG+GGG | - | chr8_3:26288265-26288284 | None:intergenic | 40.0% | |
| GCATCCAGCTACAAATTCAT+GGG | - | chr8_3:26288266-26288285 | None:intergenic | 40.0% | |
| TGCATCCAGCTACAAATTCA+TGG | - | chr8_3:26288267-26288286 | None:intergenic | 40.0% | |
| ! | GCGTTATCGATTGCAAATTG+CGG | + | chr8_3:26288334-26288353 | Msa1284220:intron | 40.0% |
| ATCGATTGCAAATTGCGGAA+TGG | + | chr8_3:26288339-26288358 | Msa1284220:intron | 40.0% | |
| TTGTGATGAGACATCCATCA+TGG | + | chr8_3:26288396-26288415 | Msa1284220:intron | 40.0% | |
| GCTGTAATGGCGTGTTTATA+GGG | + | chr8_3:26288430-26288449 | Msa1284220:intron | 40.0% | |
| TAATGGCGTGTTTATAGGGA+AGG | + | chr8_3:26288434-26288453 | Msa1284220:intron | 40.0% | |
| !! | AGGAGCTTTGGGACTAAATT+TGG | - | chr8_3:26288678-26288697 | None:intergenic | 40.0% |
| ! | AGAAGTGAGAAAGGAAGTGT+GGG | - | chr8_3:26288726-26288745 | None:intergenic | 40.0% |
| ! | AGTAAGCAGTGTATTGATGG+CGG | + | chr8_3:26288799-26288818 | Msa1284220:intron | 40.0% |
| ACATCTGCCATAAAACGTCA+CGG | + | chr8_3:26288852-26288871 | Msa1284220:intron | 40.0% | |
| TTGTCAAATATTGGCCATGG+CGG | - | chr8_3:26288935-26288954 | None:intergenic | 40.0% | |
| GTGTTGTCAAATATTGGCCA+TGG | - | chr8_3:26288938-26288957 | None:intergenic | 40.0% | |
| TCAGGGTGATCTTCATTGAT+AGG | - | chr8_3:26289063-26289082 | None:intergenic | 40.0% | |
| TCTGATCTCTGCACAAATAC+TGG | - | chr8_3:26289455-26289474 | None:intergenic | 40.0% | |
| TTTGTGCAGAGATCAGAACA+AGG | + | chr8_3:26289458-26289477 | Msa1284220:CDS | 40.0% | |
| CCTGAACAGTAAAGGTCAAA+GGG | - | chr8_3:26289534-26289553 | None:intergenic | 40.0% | |
| ACCTGAACAGTAAAGGTCAA+AGG | - | chr8_3:26289535-26289554 | None:intergenic | 40.0% | |
| ATGGCATACCTGAACAGTAA+AGG | - | chr8_3:26289542-26289561 | None:intergenic | 40.0% | |
| GGTCATTATTCAAGCTGCAA+CGG | - | chr8_3:26289576-26289595 | None:intergenic | 40.0% | |
| AACGACATCCAAAGGATACT+AGG | - | chr8_3:26289597-26289616 | None:intergenic | 40.0% | |
| TAGTATCCTTTGGATGTCGT+TGG | + | chr8_3:26289596-26289615 | Msa1284220:intron | 40.0% | |
| GAAAATCCAACGACATCCAA+AGG | - | chr8_3:26289605-26289624 | None:intergenic | 40.0% | |
| ! | AATTTTGTAGAAGGACCCTG+AGG | - | chr8_3:26289654-26289673 | None:intergenic | 40.0% |
| TTCTCCCATGTATCAATTGC+AGG | - | chr8_3:26289994-26290013 | None:intergenic | 40.0% | |
| AGCACTAAAGGAAGCTATTG+AGG | + | chr8_3:26290335-26290354 | Msa1284220:CDS | 40.0% | |
| !!! | GGGCACATGCTTGATTTTTT+TGG | + | chr8_3:26290474-26290493 | Msa1284220:intron | 40.0% |
| CTGAAATGCTACCAAGAGTT+CGG | - | chr8_3:26290573-26290592 | None:intergenic | 40.0% | |
| TAGCATTTCAGTGTGATCAC+CGG | + | chr8_3:26290582-26290601 | Msa1284220:CDS | 40.0% | |
| ATAAGTCGATGGCTGGTAAA+TGG | - | chr8_3:26290665-26290684 | None:intergenic | 40.0% | |
| ATGACATATAAGTCGATGGC+TGG | - | chr8_3:26290672-26290691 | None:intergenic | 40.0% | |
| !! | AAGTTAAGCATTGGGAGAAG+TGG | + | chr8_3:26290788-26290807 | Msa1284220:CDS | 40.0% |
| TGAGAGGTAGGTTTGGAAAT+TGG | - | chr8_3:26290839-26290858 | None:intergenic | 40.0% | |
| TCAATATGAGCTATTCGACC+AGG | - | chr8_3:26290893-26290912 | None:intergenic | 40.0% | |
| AATTATCTGGCAAACACACG+AGG | - | chr8_3:26291142-26291161 | None:intergenic | 40.0% | |
| CATCCTGACCATGTCAGAAA+TGG | + | chr8_3:26286851-26286870 | Msa1284220:exon | 45.0% | |
| CATCCATTTCTGACATGGTC+AGG | - | chr8_3:26286857-26286876 | None:intergenic | 45.0% | |
| TGCGAACTGGAAAACGTACA+AGG | + | chr8_3:26286897-26286916 | Msa1284220:CDS | 45.0% | |
| ! | TTTGAACGCGTTTTCGGTTC+CGG | + | chr8_3:26287223-26287242 | Msa1284220:CDS | 45.0% |
| TTGAGGAGAAGCTGCATATC+AGG | - | chr8_3:26287284-26287303 | None:intergenic | 45.0% | |
| ! | GTGATTTTGTGTCTCGAGAC+AGG | + | chr8_3:26287727-26287746 | Msa1284220:intron | 45.0% |
| ! | GATTTTGTGTCTCGAGACAG+GGG | + | chr8_3:26287729-26287748 | Msa1284220:intron | 45.0% |
| AGACAGGGGAAACTACAACT+TGG | + | chr8_3:26287743-26287762 | Msa1284220:intron | 45.0% | |
| CGAACTGGATTCACGATAGT+TGG | + | chr8_3:26287899-26287918 | Msa1284220:intron | 45.0% | |
| CATTCACGCAATCACTCACT+TGG | - | chr8_3:26288026-26288045 | None:intergenic | 45.0% | |
| GTGAGTGATTGCGTGAATGT+AGG | + | chr8_3:26288027-26288046 | Msa1284220:intron | 45.0% | |
| ATCCATCATGGCTGCACAAT+AGG | + | chr8_3:26288408-26288427 | Msa1284220:intron | 45.0% | |
| GGCTGTAATGGCGTGTTTAT+AGG | + | chr8_3:26288429-26288448 | Msa1284220:intron | 45.0% | |
| ! | GGATGGTGAAATATGGTGGA+AGG | - | chr8_3:26288467-26288486 | None:intergenic | 45.0% |
| ACTTGATGCAGTGTTGTCGA+TGG | - | chr8_3:26288491-26288510 | None:intergenic | 45.0% | |
| AAGGGTCTACAAGGAGCTTT+GGG | - | chr8_3:26288689-26288708 | None:intergenic | 45.0% | |
| GAGAAGTGAGAAAGGAAGTG+TGG | - | chr8_3:26288727-26288746 | None:intergenic | 45.0% | |
| ! | GTGACGTTTTATGGCAGATG+TGG | - | chr8_3:26288853-26288872 | None:intergenic | 45.0% |
| CACCACCATCCGTTACAAAT+TGG | + | chr8_3:26288875-26288894 | Msa1284220:intron | 45.0% | |
| ! | CATGGCCAATTTGTAACGGA+TGG | - | chr8_3:26288883-26288902 | None:intergenic | 45.0% |
| CATCCGTTACAAATTGGCCA+TGG | + | chr8_3:26288881-26288900 | Msa1284220:intron | 45.0% | |
| CTGCCATGGCCAATTTGTAA+CGG | - | chr8_3:26288887-26288906 | None:intergenic | 45.0% | |
| TTCCAACAGATTGCCTGTCA+CGG | + | chr8_3:26289126-26289145 | Msa1284220:intron | 45.0% | |
| CTACAGATCTGAAGATGTGG+AGG | - | chr8_3:26289420-26289439 | None:intergenic | 45.0% | |
| CTTCAGATCTGTAGATTCGC+TGG | + | chr8_3:26289426-26289445 | Msa1284220:intron | 45.0% | |
| TAGTTCCATGCAACGGTATC+AGG | - | chr8_3:26289487-26289506 | None:intergenic | 45.0% | |
| CCCTTTGACCTTTACTGTTC+AGG | + | chr8_3:26289531-26289550 | Msa1284220:CDS | 45.0% | |
| TCGCACCTGCAATTGATACA+TGG | + | chr8_3:26289986-26290005 | Msa1284220:intron | 45.0% | |
| CGCACCTGCAATTGATACAT+GGG | + | chr8_3:26289987-26290006 | Msa1284220:intron | 45.0% | |
| TCCTTTAGTGCTGCAGACTA+AGG | - | chr8_3:26290327-26290346 | None:intergenic | 45.0% | |
| ATTGAGGATCTTGAATGGCC+TGG | + | chr8_3:26290351-26290370 | Msa1284220:CDS | 45.0% | |
| GTTATCTGGATGCTTGATCC+AGG | - | chr8_3:26290372-26290391 | None:intergenic | 45.0% | |
| ! | GATCTGGCTCCATAGTTATC+TGG | - | chr8_3:26290386-26290405 | None:intergenic | 45.0% |
| AACGTAACAGAAGGAGGATC+TGG | - | chr8_3:26290402-26290421 | None:intergenic | 45.0% | |
| CGAAAGCAATACAAACCTGC+AGG | - | chr8_3:26290446-26290465 | None:intergenic | 45.0% | |
| TTGTGCGAATTCCGAACTCT+TGG | + | chr8_3:26290559-26290578 | Msa1284220:CDS | 45.0% | |
| AGCATTTCAGTGTGATCACC+GGG | + | chr8_3:26290583-26290602 | Msa1284220:CDS | 45.0% | |
| ATAAGGGTGAGAGGTAGGTT+TGG | - | chr8_3:26290846-26290865 | None:intergenic | 45.0% | |
| AGAATCGACATAAGGGTGAG+AGG | - | chr8_3:26290855-26290874 | None:intergenic | 45.0% | |
| ! | AGTGTCATTGCACGGGAAAT+AGG | + | chr8_3:26291163-26291182 | Msa1284220:three_prime_UTR | 45.0% |
| ACCAGACGTTCTATGCGAAC+TGG | + | chr8_3:26286884-26286903 | Msa1284220:CDS | 50.0% | |
| TCCAGTTCGCATAGAACGTC+TGG | - | chr8_3:26286888-26286907 | None:intergenic | 50.0% | |
| TTTCCATCGAACGGCGGTTA+AGG | - | chr8_3:26286934-26286953 | None:intergenic | 50.0% | |
| !! | TTGGTGGCGTTTCCATCGAA+CGG | - | chr8_3:26286943-26286962 | None:intergenic | 50.0% |
| AATCTATGACGGCGTCTTGG+TGG | - | chr8_3:26286959-26286978 | None:intergenic | 50.0% | |
| ! | TTGAACGCGTTTTCGGTTCC+GGG | + | chr8_3:26287224-26287243 | Msa1284220:CDS | 50.0% |
| ! | TTTTCGGTTCCGGGTCATTC+TGG | + | chr8_3:26287233-26287252 | Msa1284220:CDS | 50.0% |
| AGAAGCTGCATATCAGGACC+AGG | - | chr8_3:26287278-26287297 | None:intergenic | 50.0% | |
| GCAACTAACGGTGGATCAGA+AGG | - | chr8_3:26287770-26287789 | None:intergenic | 50.0% | |
| CTGATCCACCGTTAGTTGCT+TGG | + | chr8_3:26287771-26287790 | Msa1284220:intron | 50.0% | |
| GGTAACCAAGCAACTAACGG+TGG | - | chr8_3:26287779-26287798 | None:intergenic | 50.0% | |
| TAGCAGTTGTGCGTTCGAAC+TGG | + | chr8_3:26287884-26287903 | Msa1284220:intron | 50.0% | |
| AGCCTATTGTGCAGCCATGA+TGG | - | chr8_3:26288413-26288432 | None:intergenic | 50.0% | |
| GGCTGCACAATAGGCTGTAA+TGG | + | chr8_3:26288417-26288436 | Msa1284220:intron | 50.0% | |
| ! | TGGCGGATGGTGAAATATGG+TGG | - | chr8_3:26288471-26288490 | None:intergenic | 50.0% |
| !! | CGATGGCGGATGGTGAAATA+TGG | - | chr8_3:26288474-26288493 | None:intergenic | 50.0% |
| TGATGCAGTGTTGTCGATGG+CGG | - | chr8_3:26288488-26288507 | None:intergenic | 50.0% | |
| GAAGGGTCTACAAGGAGCTT+TGG | - | chr8_3:26288690-26288709 | None:intergenic | 50.0% | |
| !! | GGCCAATTTGTAACGGATGG+TGG | - | chr8_3:26288880-26288899 | None:intergenic | 50.0% |
| ! | ATATTGGCCATGGCGGAATG+TGG | - | chr8_3:26288928-26288947 | None:intergenic | 50.0% |
| AACCGTGACAGGCAATCTGT+TGG | - | chr8_3:26289131-26289150 | None:intergenic | 50.0% | |
| GGATTCCTGATACCGTTGCA+TGG | + | chr8_3:26289479-26289498 | Msa1284220:CDS | 50.0% | |
| TTTGTAGAAGGACCCTGAGG+TGG | - | chr8_3:26289651-26289670 | None:intergenic | 50.0% | |
| GCCTTAGTCTGCAGCACTAA+AGG | + | chr8_3:26290323-26290342 | Msa1284220:intron | 50.0% | |
| TCAGCTCGCAACGTAACAGA+AGG | - | chr8_3:26290411-26290430 | None:intergenic | 50.0% | |
| TCTGTTACGTTGCGAGCTGA+AGG | + | chr8_3:26290411-26290430 | Msa1284220:CDS | 50.0% | |
| TCGACATAAGGGTGAGAGGT+AGG | - | chr8_3:26290851-26290870 | None:intergenic | 50.0% | |
| !! | CACCCTTATGTCGATTCTGC+CGG | + | chr8_3:26290857-26290876 | Msa1284220:CDS | 50.0% |
| AGCCGGCAGAATCGACATAA+GGG | - | chr8_3:26290862-26290881 | None:intergenic | 50.0% | |
| TAGCCGGCAGAATCGACATA+AGG | - | chr8_3:26290863-26290882 | None:intergenic | 50.0% | |
| !! | TCGACCAGGTTGTTGATAGC+CGG | - | chr8_3:26290879-26290898 | None:intergenic | 50.0% |
| TGGCAAACACACGAGGTGTA+TGG | - | chr8_3:26291135-26291154 | None:intergenic | 50.0% | |
| !!! | GGTGGTGCCGTGACGTTTTA+TGG | - | chr8_3:26288862-26288881 | None:intergenic | 55.0% |
| !! | GTCAAAGGGTTAGTCCCAGC+AGG | - | chr8_3:26289520-26289539 | None:intergenic | 55.0% |
| GCTGCAGACTAAGGCCAGTT+TGG | - | chr8_3:26290318-26290337 | None:intergenic | 55.0% | |
| GCTCGCAACGTAACAGAAGG+AGG | - | chr8_3:26290408-26290427 | None:intergenic | 55.0% | |
| ACGTTGCGAGCTGAAGGACA+TGG | + | chr8_3:26290417-26290436 | Msa1284220:CDS | 55.0% | |
| CGTTGCGAGCTGAAGGACAT+GGG | + | chr8_3:26290418-26290437 | Msa1284220:CDS | 55.0% | |
| GTTGCGAGCTGAAGGACATG+GGG | + | chr8_3:26290419-26290438 | Msa1284220:CDS | 55.0% | |
| ! | TCTGCCGGCTATCAACAACC+TGG | + | chr8_3:26290872-26290891 | Msa1284220:CDS | 55.0% |
| ACGCCTTAACCGCCGTTCGA+TGG | + | chr8_3:26286928-26286947 | Msa1284220:CDS | 60.0% | |
| GTGGCGTTTCCATCGAACGG+CGG | - | chr8_3:26286940-26286959 | None:intergenic | 60.0% | |
| ! | GCAGAGGGACGACCTCGTTT+TGG | + | chr8_3:26287173-26287192 | Msa1284220:CDS | 60.0% |
| !! | GCAGTGTTGTCGATGGCGGA+TGG | - | chr8_3:26288484-26288503 | None:intergenic | 60.0% |
| TCTCCCACCACATTCCGCCA+TGG | + | chr8_3:26288918-26288937 | Msa1284220:intron | 60.0% | |
| ! | TGGCCATGGCGGAATGTGGT+GGG | - | chr8_3:26288924-26288943 | None:intergenic | 60.0% |
| ! | TTGGCCATGGCGGAATGTGG+TGG | - | chr8_3:26288925-26288944 | None:intergenic | 60.0% |
| TAGAAGGACCCTGAGGTGGC+GGG | - | chr8_3:26289647-26289666 | None:intergenic | 60.0% | |
| GTAGAAGGACCCTGAGGTGG+CGG | - | chr8_3:26289648-26289667 | None:intergenic | 60.0% | |
| TGAAGGACATGGGGACCTGC+AGG | + | chr8_3:26290428-26290447 | Msa1284220:CDS | 60.0% | |
| TACCAATCCCCCGCCACCTC+AGG | + | chr8_3:26289635-26289654 | Msa1284220:intron | 65.0% | |
| ACCAATCCCCCGCCACCTCA+GGG | + | chr8_3:26289636-26289655 | Msa1284220:intron | 65.0% | |
| AGAAGGACCCTGAGGTGGCG+GGG | - | chr8_3:26289646-26289665 | None:intergenic | 65.0% | |
| !! | ACCCTGAGGTGGCGGGGGAT+TGG | - | chr8_3:26289640-26289659 | None:intergenic | 70.0% |
| ! | GAAGGACCCTGAGGTGGCGG+GGG | - | chr8_3:26289645-26289664 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 26286775 | 26291320 | 26286775 | ID=Msa1284220;Name=Msa1284220 |
| chr8_3 | mRNA | 26286775 | 26291320 | 26286775 | ID=Msa1284220-mRNA-1;Parent=Msa1284220;Name=Msa1284220-mRNA-1;_AED=0.23;_eAED=0.23;_QI=86|1|1|1|0.83|0.71|7|351|296 |
| chr8_3 | exon | 26286775 | 26287052 | 26286775 | ID=Msa1284220-mRNA-1:exon:9146;Parent=Msa1284220-mRNA-1 |
| chr8_3 | exon | 26287149 | 26287303 | 26287149 | ID=Msa1284220-mRNA-1:exon:9147;Parent=Msa1284220-mRNA-1 |
| chr8_3 | exon | 26289432 | 26289552 | 26289432 | ID=Msa1284220-mRNA-1:exon:9148;Parent=Msa1284220-mRNA-1 |
| chr8_3 | exon | 26290330 | 26290449 | 26290330 | ID=Msa1284220-mRNA-1:exon:9149;Parent=Msa1284220-mRNA-1 |
| chr8_3 | exon | 26290545 | 26290615 | 26290545 | ID=Msa1284220-mRNA-1:exon:9150;Parent=Msa1284220-mRNA-1 |
| chr8_3 | exon | 26290715 | 26291243 | 26290715 | ID=Msa1284220-mRNA-1:exon:9151;Parent=Msa1284220-mRNA-1 |
| chr8_3 | exon | 26291267 | 26291320 | 26291267 | ID=Msa1284220-mRNA-1:exon:9152;Parent=Msa1284220-mRNA-1 |
| chr8_3 | five_prime_UTR | 26286775 | 26286860 | 26286775 | ID=Msa1284220-mRNA-1:five_prime_utr;Parent=Msa1284220-mRNA-1 |
| chr8_3 | CDS | 26286861 | 26287052 | 26286861 | ID=Msa1284220-mRNA-1:cds;Parent=Msa1284220-mRNA-1 |
| chr8_3 | CDS | 26287149 | 26287303 | 26287149 | ID=Msa1284220-mRNA-1:cds;Parent=Msa1284220-mRNA-1 |
| chr8_3 | CDS | 26289432 | 26289552 | 26289432 | ID=Msa1284220-mRNA-1:cds;Parent=Msa1284220-mRNA-1 |
| chr8_3 | CDS | 26290330 | 26290449 | 26290330 | ID=Msa1284220-mRNA-1:cds;Parent=Msa1284220-mRNA-1 |
| chr8_3 | CDS | 26290545 | 26290615 | 26290545 | ID=Msa1284220-mRNA-1:cds;Parent=Msa1284220-mRNA-1 |
| chr8_3 | CDS | 26290715 | 26290946 | 26290715 | ID=Msa1284220-mRNA-1:cds;Parent=Msa1284220-mRNA-1 |
| chr8_3 | three_prime_UTR | 26290947 | 26291243 | 26290947 | ID=Msa1284220-mRNA-1:three_prime_utr;Parent=Msa1284220-mRNA-1 |
| chr8_3 | three_prime_UTR | 26291267 | 26291320 | 26291267 | ID=Msa1284220-mRNA-1:three_prime_utr;Parent=Msa1284220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
