AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0420820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0420820 MtrunA17_Chr3g0120731 98.349 727 12 0 1 727 1 727 0.0 1468
Msa0420820 MtrunA17_Chr1g0160041 62.734 695 253 5 35 727 5 695 0.0 902
Msa0420820 MtrunA17_Chr3g0124631 58.512 699 282 3 33 727 3 697 0.0 854
Msa0420820 MtrunA17_Chr1g0205711 33.798 645 380 13 89 727 82 685 1.06e-111 353
Msa0420820 MtrunA17_Chr5g0396691 32.822 652 394 13 83 726 39 654 6.14e-101 324
Msa0420820 MtrunA17_Chr5g0396711 32.209 652 398 12 83 726 39 654 4.22e-99 319
Msa0420820 MtrunA17_Chr4g0034181 32.343 606 372 14 132 726 73 651 2.86e-96 312
Msa0420820 MtrunA17_Chr8g0388081 31.509 603 383 11 132 726 13 593 1.18e-94 306
Msa0420820 MtrunA17_Chr1g0162621 31.921 661 394 17 79 726 36 653 5.57e-94 306
Msa0420820 MtrunA17_Chr1g0194371 30.960 646 395 14 93 726 47 653 1.71e-88 291
Msa0420820 MtrunA17_Chr7g0270221 31.280 633 354 15 89 714 43 601 6.24e-85 281
Msa0420820 MtrunA17_Chr3g0121931 24.961 645 395 20 138 726 108 719 7.45e-40 157
Msa0420820 MtrunA17_Chr3g0121951 25.387 646 388 25 138 726 106 714 6.08e-37 148
Msa0420820 MtrunA17_Chr8g0377991 24.455 642 404 17 138 726 110 723 1.03e-36 147
Msa0420820 MtrunA17_Chr4g0039791 27.795 331 171 12 286 609 208 477 8.03e-19 90.9
Msa0420820 MtrunA17_Chr5g0409791 26.705 352 179 14 272 611 202 486 1.01e-17 87.4
Msa0420820 MtrunA17_Chr5g0395431 24.082 490 274 20 138 611 98 505 6.77e-17 84.7
Msa0420820 MtrunA17_Chr4g0000461 26.747 501 269 21 135 620 51 468 4.96e-16 82.0
Msa0420820 MtrunA17_Chr6g0471921 24.000 475 282 13 138 609 33 431 2.24e-14 76.6
Msa0420820 MtrunA17_Chr4g0072561 24.897 486 276 19 135 609 57 464 2.72e-14 76.3
Msa0420820 MtrunA17_Chr2g0334131 30.120 166 102 6 452 611 44 201 1.37e-11 65.9
Msa0420820 MtrunA17_Chr1g0180541 28.022 182 109 8 441 611 296 466 7.92e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0420820 AT2G04350.2 72.566 678 186 0 50 727 43 720 0.0 1043
Msa0420820 AT2G04350.1 72.566 678 186 0 50 727 43 720 0.0 1043
Msa0420820 AT1G77590.1 63.965 691 243 1 37 727 7 691 0.0 949
Msa0420820 AT1G77590.2 66.909 550 176 1 178 727 2 545 0.0 796
Msa0420820 AT5G27600.1 35.047 642 376 9 89 727 85 688 4.57e-124 386
Msa0420820 AT3G05970.1 34.477 641 379 10 89 726 85 687 7.69e-116 365
Msa0420820 AT4G23850.1 32.159 653 397 14 83 726 40 655 3.04e-103 331
Msa0420820 AT4G11030.1 31.651 654 399 14 83 726 40 655 7.07e-100 322
Msa0420820 AT1G64400.1 31.832 644 391 14 93 726 50 655 8.86e-98 316
Msa0420820 AT1G49430.1 30.699 658 403 14 80 727 44 658 4.42e-97 315
Msa0420820 AT2G47240.1 31.490 651 392 15 89 726 43 652 1.35e-93 305
Msa0420820 AT2G47240.2 31.490 651 392 15 89 726 43 652 1.35e-93 305
Msa0420820 AT2G47240.3 31.490 651 392 15 89 726 43 652 1.35e-93 305
Msa0420820 AT2G47240.4 31.767 617 379 14 124 726 5 593 9.27e-92 298
Msa0420820 AT1G49430.2 29.880 502 299 14 80 571 44 502 6.39e-62 216
Msa0420820 AT4G14070.1 24.181 641 394 19 138 727 128 727 2.08e-37 150
Msa0420820 AT3G23790.1 23.557 641 407 17 138 726 112 721 7.47e-37 148
Msa0420820 AT4G19010.1 26.702 382 207 12 280 651 203 521 1.35e-21 100
Msa0420820 AT1G20500.1 25.000 352 193 13 279 625 195 480 3.14e-18 89.4
Msa0420820 AT1G20510.2 26.113 337 178 12 280 609 188 460 1.48e-15 80.5
Msa0420820 AT1G20510.1 26.113 337 178 12 280 609 188 460 1.77e-15 80.5
Msa0420820 AT1G77240.1 43.956 91 46 2 534 624 390 475 5.87e-12 69.3
Msa0420820 AT1G75960.1 33.333 198 91 8 449 624 296 474 1.31e-11 68.2
Msa0420820 AT4G05160.1 30.220 182 104 9 452 625 308 474 1.70e-11 67.8
Msa0420820 AT5G16370.1 35.542 166 80 6 475 624 320 474 1.90e-11 67.8
Msa0420820 AT5G16340.1 43.956 91 45 2 534 624 390 474 1.91e-11 67.8
Msa0420820 AT1G20560.2 45.055 91 44 2 534 624 316 400 2.88e-11 67.0
Msa0420820 AT1G20480.1 32.919 161 97 6 452 609 329 481 2.97e-11 67.0
Msa0420820 AT1G20560.1 45.055 91 44 2 534 624 394 478 3.25e-11 67.0
Msa0420820 AT1G66120.1 50.000 76 32 2 534 609 393 462 4.18e-11 66.6

Find 197 sgRNAs with CRISPR-Local

Find 478 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAGATCATCATTGAATT+TGG 0.119258 3_2:+69586718 None:intergenic
CATACACATAATAGATTTCT+TGG 0.222635 3_2:-69592437 Msa0420820:CDS
CGCCGACTGGCTGCTGTAAA+AGG 0.237719 3_2:-69590512 Msa0420820:CDS
CTTGGAACAAGGAAACTAAT+AGG 0.243114 3_2:-69592419 Msa0420820:CDS
TCTGCCTTGTTGCTACATTA+AGG 0.248003 3_2:-69588766 Msa0420820:intron
GTGTGTGTTTAGCTAAAATT+TGG 0.250840 3_2:+69593189 None:intergenic
TTGAATATCTGTGAAACATT+TGG 0.252203 3_2:-69592698 Msa0420820:CDS
GACAACTGCAACAGCATTCT+TGG 0.265044 3_2:+69591669 None:intergenic
TGTATTCGATACCAGTTTCT+TGG 0.268410 3_2:+69587849 None:intergenic
TGTACTTAGGTGGAGGAAAA+AGG 0.286929 3_2:-69590572 Msa0420820:intron
TTTAGCTAAAATTTGGGTTT+TGG 0.295776 3_2:+69593196 None:intergenic
GCTCCCATTGGGCAAGGATA+TGG 0.313519 3_2:-69588861 Msa0420820:CDS
TTAATTTATCTCCCTCAATA+TGG 0.329279 3_2:-69586623 Msa0420820:three_prime_UTR
GCCAACAGCTTAATCTTTGC+AGG 0.333841 3_2:+69586809 None:intergenic
AAGAAGACCGGATGCAAAAT+TGG 0.336190 3_2:+69592298 None:intergenic
ATCAATGACATATGTATTCA+TGG 0.336551 3_2:+69586440 None:intergenic
TGGTTGTATAGCTTGTTTCT+TGG 0.354600 3_2:-69588474 Msa0420820:intron
GCAGTAACTAATCCAGATTC+AGG 0.362669 3_2:+69586773 None:intergenic
AGGAAGCTGGCTAGGAGCTT+GGG 0.363799 3_2:-69590492 Msa0420820:CDS
TAAAACAGTAACATCTCCTT+TGG 0.371065 3_2:+69590938 None:intergenic
GAAAAGTGGGCCCAAGAAAC+TGG 0.381728 3_2:-69587860 Msa0420820:CDS
AACCTCCGATTTATGCTTTG+TGG 0.383577 3_2:-69590407 Msa0420820:CDS
ACGTCCTTGCTACCTAGATT+TGG 0.387427 3_2:+69591169 None:intergenic
TGCAATCTGGAAAAGATTCT+TGG 0.387460 3_2:+69590541 None:intergenic
TGAATATCTGTGAAACATTT+GGG 0.391428 3_2:-69592697 Msa0420820:CDS
GATCCATGGACACCTGAATC+TGG 0.393722 3_2:-69586785 Msa0420820:CDS
CTATACTTCAGGGTTGCTTC+CGG 0.398189 3_2:-69592101 Msa0420820:intron
AGAACCTCAGTGACAGCTTC+AGG 0.401094 3_2:+69587800 None:intergenic
TTGGAACAAGGAAACTAATA+GGG 0.401463 3_2:-69592418 Msa0420820:CDS
CTGAGTTGGTTGAAGTTCCT+TGG 0.401688 3_2:-69592508 Msa0420820:CDS
CATGGAGAATATATCTCTCT+TGG 0.401977 3_2:-69588104 Msa0420820:CDS
TGTTGTGAATCTCCGGATAA+AGG 0.402833 3_2:+69590377 None:intergenic
AGGTAAAGTACGTGGTGTTC+CGG 0.403960 3_2:-69592579 Msa0420820:CDS
GTATTCGATACCAGTTTCTT+GGG 0.404205 3_2:+69587850 None:intergenic
CACAGATCAGAGTAGATACT+TGG 0.405018 3_2:+69591884 None:intergenic
AACCATGAGGAACTACCGTT+TGG 0.405080 3_2:+69592728 None:intergenic
CGTAAAGCTGCTGAATAAAC+TGG 0.407665 3_2:-69591860 Msa0420820:CDS
GGTTGTATAGCTTGTTTCTT+GGG 0.407689 3_2:-69588473 Msa0420820:intron
TAGCTGGTACCGCTGTCAAA+AGG 0.409142 3_2:+69590907 None:intergenic
CTTGCTGCAGGTGTTGCAAT+TGG 0.416381 3_2:-69591014 Msa0420820:CDS
TAGCTTGTTTCTTGGGAAGA+AGG 0.416496 3_2:-69588466 Msa0420820:CDS
TTTGTGTTTGCTATAGTCAT+AGG 0.417727 3_2:-69592650 Msa0420820:CDS
TCAGGTTTGTTACAGAGATC+AGG 0.420112 3_2:+69587818 None:intergenic
GGTGGAAGTTAGTGGTGAAT+CGG 0.423699 3_2:-69592558 Msa0420820:CDS
TTGAAAGATCATGGAGAACT+TGG 0.426060 3_2:-69592674 Msa0420820:CDS
GTCAATGTACTATCTGTTGC+AGG 0.426113 3_2:-69586665 Msa0420820:three_prime_UTR
ATGACTGTGGTTCCAAATCT+AGG 0.430718 3_2:-69591181 Msa0420820:CDS
TCTTCCTATCGATGATTTCG+AGG 0.432227 3_2:+69588147 None:intergenic
GGTTTGACCGAAACATTTGC+TGG 0.435507 3_2:-69588840 Msa0420820:CDS
ATATTAGCTAACCTTGGAAA+TGG 0.436276 3_2:+69587772 None:intergenic
TAAAACTGATGAAGCGTTCA+AGG 0.438215 3_2:-69588353 Msa0420820:intron
TGAGTGGTTCATTGCCCTCC+AGG 0.439261 3_2:-69592222 Msa0420820:intron
TGTGGCGGAGCTCCTTTATC+CGG 0.439364 3_2:-69590389 Msa0420820:CDS
AGCTTGGGGAGTGGAGAAGT+TGG 0.441224 3_2:-69590477 Msa0420820:CDS
TTTGATGAAGTTGAGAAACT+TGG 0.442021 3_2:-69591724 Msa0420820:CDS
ACATTTGGGTTGAAAGATCA+TGG 0.443508 3_2:-69592683 Msa0420820:CDS
CCCATTCATATTCTCCTAAG+TGG 0.447435 3_2:+69592351 None:intergenic
AAGGAAGCTGGCTAGGAGCT+TGG 0.448056 3_2:-69590493 Msa0420820:CDS
CGAGGAGAGGTTGTAGTTGG+CGG 0.449936 3_2:-69588412 Msa0420820:CDS
TGATTATGTGGATAGTATAA+TGG 0.453234 3_2:-69587945 Msa0420820:CDS
CTCCGCCACAAAGCATAAAT+CGG 0.459003 3_2:+69590402 None:intergenic
TCCACTTAGGAGAATATGAA+TGG 0.461774 3_2:-69592352 Msa0420820:CDS
TACAAGTGGCAGTACAGGTC+TGG 0.462802 3_2:-69591641 Msa0420820:CDS
GGCAGCCCCAGCAAATGTTT+CGG 0.464761 3_2:+69588833 None:intergenic
TGTTGCTTCACGTCAGTCTC+TGG 0.465954 3_2:-69587882 Msa0420820:CDS
CACGTCAGTCTCTGGAAAAG+TGG 0.472438 3_2:-69587874 Msa0420820:CDS
GCAGGTGTTGCAATTGGTTA+CGG 0.484959 3_2:-69591008 Msa0420820:CDS
ATGTATACAAGTGGCAGTAC+AGG 0.486721 3_2:-69591646 Msa0420820:CDS
ATGATTTCGAGGCACCCATC+AGG 0.487435 3_2:+69588158 None:intergenic
GGCGGTTTCAGTGTGACAGC+TGG 0.489074 3_2:-69588394 Msa0420820:CDS
GCATCCGGTCTTCTTAAGCT+AGG 0.492666 3_2:-69592290 Msa0420820:CDS
GCAACACAGTAACTGTGAAA+GGG 0.493243 3_2:+69587911 None:intergenic
GTCGGCGCTTGTATGCAATC+TGG 0.495009 3_2:+69590528 None:intergenic
TGTGTGTTTAGCTAAAATTT+GGG 0.495224 3_2:+69593190 None:intergenic
GCATTCTTGGAAGGTAAGCT+TGG 0.498121 3_2:+69591682 None:intergenic
TCCTGCAAAGATTAAGCTGT+TGG 0.498688 3_2:-69586810 Msa0420820:CDS
GCTGTAAAAGGAAGCTGGCT+AGG 0.499568 3_2:-69590500 Msa0420820:CDS
ATGTCGACAGGGCTCCCATT+GGG 0.499579 3_2:-69588872 Msa0420820:intron
AAACCATATCCTTGCCCAAT+GGG 0.499985 3_2:+69588858 None:intergenic
ACAACCTCTCCTCGTGGCAT+TGG 0.501085 3_2:+69588421 None:intergenic
CAGTCTGTTATGCTTGCTGC+AGG 0.501923 3_2:-69591026 Msa0420820:CDS
TTGTTACATCTAGTGATGGC+AGG 0.504006 3_2:-69592388 Msa0420820:CDS
TTGATGAAGTTGAGAAACTT+GGG 0.504260 3_2:-69591723 Msa0420820:CDS
GTCACTATTTATGCTTCTCT+AGG 0.504496 3_2:-69592063 Msa0420820:CDS
GAATATGAATGGGAAACCTA+TGG 0.506008 3_2:-69592341 Msa0420820:CDS
AGCTGGTACCGCTGTCAAAA+GGG 0.508384 3_2:+69590908 None:intergenic
CAATTCATCAATATCTGTGT+GGG 0.511071 3_2:-69590356 Msa0420820:CDS
CGAATACGATCAATAATAGC+TGG 0.511436 3_2:+69590891 None:intergenic
AGGTAGCAAGGACGTGTACT+TGG 0.514433 3_2:-69591161 Msa0420820:CDS
CAACATGACTATCTATATCA+TGG 0.516739 3_2:+69592267 None:intergenic
GAAGGTAAGCTTGGTTCGAC+GGG 0.517194 3_2:+69591691 None:intergenic
GTGGAAGTTAGTGGTGAATC+GGG 0.522733 3_2:-69592557 Msa0420820:CDS
TGCAAAGATTAAGCTGTTGG+CGG 0.525033 3_2:-69586807 Msa0420820:CDS
TTAAGCTGTTGGCGGATCCA+TGG 0.527399 3_2:-69586799 Msa0420820:CDS
CTTGACTTTATTAGACGTAT+CGG 0.530482 3_2:+69590968 None:intergenic
GAGGCGGATGACTACAGTGT+GGG 0.530639 3_2:-69588804 Msa0420820:CDS
GATGAATTGTTGTGAATCTC+CGG 0.530741 3_2:+69590370 None:intergenic
GACTACAGTGTGGGGCGTGT+TGG 0.533189 3_2:-69588795 Msa0420820:CDS
AAAATCCGTACTGTACTTGG+AGG 0.533192 3_2:-69590431 Msa0420820:CDS
GGGGAGTGGAGAAGTTGGTG+TGG 0.534428 3_2:-69590472 Msa0420820:CDS
AGCAACACAGTAACTGTGAA+AGG 0.535609 3_2:+69587910 None:intergenic
TAATGCTCGATATTCTGAGT+TGG 0.537351 3_2:-69592522 Msa0420820:CDS
TTGGTTGAAGTTCCTTGGAA+AGG 0.537578 3_2:-69592503 Msa0420820:CDS
AATCCAGATTCAGGTGTCCA+TGG 0.538410 3_2:+69586782 None:intergenic
GGAAGGTAAGCTTGGTTCGA+CGG 0.539050 3_2:+69591690 None:intergenic
CGAAATCATCGATAGGAAGA+AGG 0.539942 3_2:-69588144 Msa0420820:CDS
CCACGAGGAGAGGTTGTAGT+TGG 0.540876 3_2:-69588415 Msa0420820:CDS
ATTATTGATCGTATTCGAGA+TGG 0.542337 3_2:-69590885 Msa0420820:CDS
TTATAGTCATTCTACATGAC+TGG 0.544701 3_2:-69586493 Msa0420820:three_prime_UTR
GACGTATCGGTCAAAGTCAT+AGG 0.544905 3_2:+69590981 None:intergenic
GTTTGACCGAAACATTTGCT+GGG 0.545833 3_2:-69588839 Msa0420820:CDS
TTGTTTCTTGGGAAGAAGGA+GGG 0.547902 3_2:-69588462 Msa0420820:CDS
ACGTCTAATAAAGTCAAGAA+AGG 0.548183 3_2:-69590963 Msa0420820:CDS
CTTTGAAGACGATAGCAAAG+AGG 0.550034 3_2:-69591794 Msa0420820:CDS
AAGTGCATCAACCATATTGA+GGG 0.552965 3_2:+69586612 None:intergenic
GGTGTTCCGGTGGAAGTTAG+TGG 0.553138 3_2:-69592566 Msa0420820:CDS
GATTGCATACAAGCGCCGAC+TGG 0.553171 3_2:-69590525 Msa0420820:CDS
CTGGCTAGGAGCTTGGGGAG+TGG 0.554245 3_2:-69590486 Msa0420820:CDS
TGGCTGCTGTAAAAGGAAGC+TGG 0.554247 3_2:-69590505 Msa0420820:CDS
ATGGTTGGAGCTCCTTTCCA+AGG 0.557226 3_2:+69592491 None:intergenic
CCACTTAGGAGAATATGAAT+GGG 0.559347 3_2:-69592351 Msa0420820:CDS
CACAACATGGTTGATCCAAA+CGG 0.559941 3_2:-69592743 Msa0420820:exon
TTGGTACAGGTTGATGAGAA+AGG 0.560445 3_2:-69588221 Msa0420820:intron
ATTGGGCGATTCCATCCTGA+TGG 0.563240 3_2:-69588173 Msa0420820:CDS
ATCCAAACGGTAGTTCCTCA+TGG 0.563796 3_2:-69592730 Msa0420820:CDS
TATGTCGACAGGGCTCCCAT+TGG 0.564910 3_2:-69588873 Msa0420820:intron
GTAGTCATCCGCCTCAGAGA+AGG 0.565707 3_2:+69588812 None:intergenic
CTTGTTTCTTGGGAAGAAGG+AGG 0.568851 3_2:-69588463 Msa0420820:CDS
GGTTCTGCAGTCCATTTCCA+AGG 0.570740 3_2:-69587783 Msa0420820:intron
TAGGGTGTCATGATTACTCA+CGG 0.571010 3_2:-69591232 Msa0420820:CDS
AGTCATAACAGCTGCTGTGG+TGG 0.572176 3_2:+69591198 None:intergenic
CTCCGATTTATGCTTTGTGG+CGG 0.574946 3_2:-69590404 Msa0420820:CDS
GGAAGCTGGCTAGGAGCTTG+GGG 0.577646 3_2:-69590491 Msa0420820:CDS
ATGGCCTAGCTTAAGAAGAC+CGG 0.578394 3_2:+69592286 None:intergenic
TATTTATGCTTCTCTAGGTG+AGG 0.579878 3_2:-69592058 Msa0420820:CDS
TTGCTTCCGGCAGAATATAA+CGG 0.583359 3_2:-69592088 Msa0420820:CDS
ATGTAGCAACAAGGCAGAGG+TGG 0.583582 3_2:+69588771 None:intergenic
CAAACCAATGCCACGAGGAG+AGG 0.584218 3_2:-69588425 Msa0420820:CDS
GAGTTTGTTACATCTAGTGA+TGG 0.586545 3_2:-69592392 Msa0420820:CDS
TGCTGGGGCTGCCTTCTCTG+AGG 0.586857 3_2:-69588823 Msa0420820:CDS
CACAGTCATAACAGCTGCTG+TGG 0.588386 3_2:+69591195 None:intergenic
ACGTCAGTCTCTGGAAAAGT+GGG 0.590984 3_2:-69587873 Msa0420820:CDS
TGACGACCGTTATATTCTGC+CGG 0.592201 3_2:+69592082 None:intergenic
TCAAATAAATGAGCCATGGT+TGG 0.593828 3_2:+69592476 None:intergenic
TTGGAAAGGAGCTCCAACCA+TGG 0.595344 3_2:-69592489 Msa0420820:CDS
GGGAGTGGAGAAGTTGGTGT+GGG 0.596221 3_2:-69590471 Msa0420820:CDS
ACTCGCGTCATGTGATTATG+TGG 0.596669 3_2:-69587957 Msa0420820:CDS
AAATTTGAGAAAGTCCACTT+AGG 0.596901 3_2:-69592365 Msa0420820:CDS
GACAGGGCTCCCATTGGGCA+AGG 0.597465 3_2:-69588867 Msa0420820:intron
AGAAGGAGGGTATCTATCAT+CGG 0.597927 3_2:-69588449 Msa0420820:CDS
TGGGGCTGCCTTCTCTGAGG+CGG 0.598886 3_2:-69588820 Msa0420820:CDS
CAAACCATATCCTTGCCCAA+TGG 0.600751 3_2:+69588857 None:intergenic
TCTGTTATAATTATTACGCG+TGG 0.603475 3_2:+69593292 None:intergenic
AACAAGGAAACTAATAGGGA+AGG 0.605953 3_2:-69592414 Msa0420820:CDS
TTAATGTAGCAACAAGGCAG+AGG 0.606353 3_2:+69588768 None:intergenic
GTAAATCAAATTTACCTGGA+GGG 0.607805 3_2:+69592208 None:intergenic
TAAAGTACGTGGTGTTCCGG+TGG 0.609917 3_2:-69592576 Msa0420820:CDS
GAAGTGCATCAACCATATTG+AGG 0.609942 3_2:+69586611 None:intergenic
ATAATAGATTTCTTGGAACA+AGG 0.610981 3_2:-69592430 Msa0420820:CDS
AAAGTCAAGAAAGGAACCAA+AGG 0.611607 3_2:-69590954 Msa0420820:CDS
TGGCAGTACAGGTCTGGCAA+AGG 0.612047 3_2:-69591635 Msa0420820:intron
TTGGGCGATTCCATCCTGAT+GGG 0.613633 3_2:-69588172 Msa0420820:CDS
AGAATATATCTCTCTTGGAA+AGG 0.614954 3_2:-69588099 Msa0420820:intron
CAACACAGTAACTGTGAAAG+GGG 0.618338 3_2:+69587912 None:intergenic
GATTCACCACTAACTTCCAC+CGG 0.619049 3_2:+69592560 None:intergenic
TTTCGAGGCACCCATCAGGA+TGG 0.619514 3_2:+69588162 None:intergenic
TTGATGAGAAAGGTGTGCGC+TGG 0.619594 3_2:-69588211 Msa0420820:CDS
AGGGTGTCATGATTACTCAC+GGG 0.627268 3_2:-69591231 Msa0420820:CDS
ACTGCAACAGCATTCTTGGA+AGG 0.628272 3_2:+69591673 None:intergenic
GGTACCGCTGTCAAAAGGGT+AGG 0.628642 3_2:+69590912 None:intergenic
ACAATTCATCAATATCTGTG+TGG 0.629139 3_2:-69590357 Msa0420820:CDS
GGTTCCAAATCTAGGTAGCA+AGG 0.630921 3_2:-69591173 Msa0420820:CDS
GGTTGCCTCCAAGTACAGTA+CGG 0.636644 3_2:+69590426 None:intergenic
GCGAGCAAAGACCTCTCCAT+AGG 0.636648 3_2:+69592325 None:intergenic
TAGCATTTCATCGTAACCAA+AGG 0.639266 3_2:-69593148 Msa0420820:intron
CGCCACAAAGCATAAATCGG+AGG 0.647486 3_2:+69590405 None:intergenic
ACAGATCAGAGTAGATACTT+GGG 0.647919 3_2:+69591885 None:intergenic
TTTCTGATACTCGGGCTGAG+TGG 0.652876 3_2:-69592238 Msa0420820:CDS
GGTGCCTCGAAATCATCGAT+AGG 0.654902 3_2:-69588151 Msa0420820:CDS
AGGCGGATGACTACAGTGTG+GGG 0.656429 3_2:-69588803 Msa0420820:CDS
TGAGGCGGATGACTACAGTG+TGG 0.657026 3_2:-69588805 Msa0420820:CDS
TGAATGGGAAACCTATGGAG+AGG 0.663469 3_2:-69592336 Msa0420820:CDS
CACAGCAGCTGTTATGACTG+TGG 0.670051 3_2:-69591194 Msa0420820:CDS
GCAGTTGTCATGTATACAAG+TGG 0.673749 3_2:-69591655 Msa0420820:CDS
TTGCTCAAATAAATGAGCCA+TGG 0.675815 3_2:+69592472 None:intergenic
TTAATGACATGTAAAACACA+CGG 0.677156 3_2:-69586583 Msa0420820:three_prime_UTR
GATATTGTCAAACTTCAACA+TGG 0.679599 3_2:-69588122 Msa0420820:CDS
AAGAAGAAAGGTAAAGTACG+TGG 0.680735 3_2:-69592587 Msa0420820:CDS
AATTCATCAATATCTGTGTG+GGG 0.681937 3_2:-69590355 Msa0420820:intron
TCTGATTCACTCACTGAACG+AGG 0.682120 3_2:-69592031 Msa0420820:intron
ACAGATAGTACATTGACATG+AGG 0.688976 3_2:+69586671 None:intergenic
CATACCTTAATGTAGCAACA+AGG 0.689852 3_2:+69588762 None:intergenic
TTTGACCGAAACATTTGCTG+GGG 0.709790 3_2:-69588838 Msa0420820:CDS
TTAGCTAAACACACACACGT+TGG 0.717126 3_2:-69593182 Msa0420820:five_prime_UTR
CAAACCTGAAGCTGTCACTG+AGG 0.724759 3_2:-69587804 Msa0420820:CDS
CCAACTACAACCTCTCCTCG+TGG 0.726095 3_2:+69588415 None:intergenic
TCGGACAAACCAATGCCACG+AGG 0.775769 3_2:-69588430 Msa0420820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTCTATATAGATTTTT+AGG - chr3_2:69588343-69588362 Msa0420820:intron 10.0%
!! AGAATTGAATTAAAAACAAA+AGG + chr3_2:69586648-69586667 None:intergenic 15.0%
!! AAAAATATCCTTGAAATTAT+TGG - chr3_2:69589826-69589845 Msa0420820:intron 15.0%
!!! ATGATTTAGAATTTTGATTT+TGG + chr3_2:69590490-69590509 None:intergenic 15.0%
!! ATCTATAAATAAGTATAAGT+TGG + chr3_2:69591052-69591071 None:intergenic 15.0%
!!! GAATTTGATTGTTATTAATT+TGG - chr3_2:69591247-69591266 Msa0420820:intron 15.0%
!!! GAAGAAAAATTAAACATTTT+CGG + chr3_2:69592122-69592141 None:intergenic 15.0%
!!! TTTTCTATTATGTTTTAACA+AGG - chr3_2:69592815-69592834 Msa0420820:intron 15.0%
!!! TATTTTACTTTGTTAATTTC+AGG - chr3_2:69592882-69592901 Msa0420820:intron 15.0%
!! TCAAAATTGAAAACAAGAAA+AGG + chr3_2:69586720-69586739 None:intergenic 20.0%
!!! GTTTTCAATTTTGATTGAAT+TGG - chr3_2:69586726-69586745 Msa0420820:CDS 20.0%
!!! AAAAAGAGAATATTTTGACT+AGG + chr3_2:69586753-69586772 None:intergenic 20.0%
!! AAAGTTAAATTGAAACCAAA+GGG + chr3_2:69586890-69586909 None:intergenic 20.0%
!! AAAAGTTAAATTGAAACCAA+AGG + chr3_2:69586891-69586910 None:intergenic 20.0%
!!! ATTCTATATAGATTTTTAGG+TGG - chr3_2:69588346-69588365 Msa0420820:intron 20.0%
!! TAACAACTTATCAAATCAAA+GGG + chr3_2:69588481-69588500 None:intergenic 20.0%
!! TTAACAACTTATCAAATCAA+AGG + chr3_2:69588482-69588501 None:intergenic 20.0%
!!! TTAACTTTTTGTTATCGTTT+AGG - chr3_2:69588498-69588517 Msa0420820:intron 20.0%
!!! TAACTTTTTGTTATCGTTTA+GGG - chr3_2:69588499-69588518 Msa0420820:intron 20.0%
!! ATTTGACAATTAAGACTTAA+AGG + chr3_2:69588668-69588687 None:intergenic 20.0%
!!! ATGATTAGTTTAAGACATTA+GGG + chr3_2:69589096-69589115 None:intergenic 20.0%
!!! AATGATTAGTTTAAGACATT+AGG + chr3_2:69589097-69589116 None:intergenic 20.0%
!! TAATGTCTTAAACTAATCAT+TGG - chr3_2:69589096-69589115 Msa0420820:intron 20.0%
!!! ACGGATTTTTTTAAAGATAA+TGG + chr3_2:69589307-69589326 None:intergenic 20.0%
!!! ATTTTATACCATGCATTATT+TGG - chr3_2:69589428-69589447 Msa0420820:intron 20.0%
!!! TTGCTTATACTTTTTTTCTT+CGG - chr3_2:69589525-69589544 Msa0420820:intron 20.0%
!! TACCACTATTATTAATATCA+TGG - chr3_2:69589616-69589635 Msa0420820:intron 20.0%
!! CTAAAAGATTTCCAAAATAA+TGG - chr3_2:69590232-69590251 Msa0420820:intron 20.0%
!!! TTTCTTTGATTCCATTATTT+TGG + chr3_2:69590246-69590265 None:intergenic 20.0%
!!! ATTTGAAATTCAAATTAGCA+AGG - chr3_2:69590294-69590313 Msa0420820:intron 20.0%
!! GGTATATTCATGAATTAATA+AGG - chr3_2:69590339-69590358 Msa0420820:intron 20.0%
!!! TGTTGATTTTTTCTGAAAAT+CGG + chr3_2:69590718-69590737 None:intergenic 20.0%
!! ATTCATTCTTTAACTATTAC+TGG - chr3_2:69590760-69590779 Msa0420820:intron 20.0%
!!! AATTATTATAGTTTTCATGC+TGG - chr3_2:69591100-69591119 Msa0420820:intron 20.0%
!! TGCAAATGAAGAAAATTAAA+AGG + chr3_2:69591459-69591478 None:intergenic 20.0%
!!! AGTCTTTCATTTTAATGTAA+TGG - chr3_2:69591755-69591774 Msa0420820:CDS 20.0%
!!! TCTTAAACTTTTAGTAGAAT+TGG - chr3_2:69592274-69592293 Msa0420820:CDS 20.0%
!!! TCAGGTTTATTTTTAGTTTA+AGG - chr3_2:69592371-69592390 Msa0420820:CDS 20.0%
!!! CAGGTTTATTTTTAGTTTAA+GGG - chr3_2:69592372-69592391 Msa0420820:CDS 20.0%
!!! AATAGAAAAAGCTCATTTTA+CGG + chr3_2:69592804-69592823 None:intergenic 20.0%
!!! TTTAGCTAAAATTTGGGTTT+TGG + chr3_2:69586556-69586575 None:intergenic 25.0%
! TGTGTGTTTAGCTAAAATTT+GGG + chr3_2:69586562-69586581 None:intergenic 25.0%
! AAAGAGCAAAGAGAATTAAT+TGG + chr3_2:69586782-69586801 None:intergenic 25.0%
! TCTGAGTGGTTATATTATAA+AGG + chr3_2:69586807-69586826 None:intergenic 25.0%
!!! CTTATTTTCACTTTTGATTC+AGG - chr3_2:69586932-69586951 Msa0420820:intron 25.0%
!!! ATTCAAATTTTTCAACCATG+AGG + chr3_2:69587037-69587056 None:intergenic 25.0%
! TTGAATATCTGTGAAACATT+TGG - chr3_2:69587051-69587070 Msa0420820:intron 25.0%
! TGAATATCTGTGAAACATTT+GGG - chr3_2:69587052-69587071 Msa0420820:intron 25.0%
!!! TTGTTTTCGGTTTTTTTCTT+AGG - chr3_2:69587138-69587157 Msa0420820:intron 25.0%
!! TTTTTCTTAGGAAAGAAGAA+AGG - chr3_2:69587150-69587169 Msa0420820:intron 25.0%
! CATACACATAATAGATTTCT+TGG - chr3_2:69587312-69587331 Msa0420820:intron 25.0%
! ATAATAGATTTCTTGGAACA+AGG - chr3_2:69587319-69587338 Msa0420820:intron 25.0%
! TGTAGTAACTAAAAATAGTG+TGG - chr3_2:69587806-69587825 Msa0420820:CDS 25.0%
! AAAACTAATAACCATGACAT+TGG + chr3_2:69588246-69588265 None:intergenic 25.0%
! ATGCACATAATGACTTAATA+TGG + chr3_2:69588389-69588408 None:intergenic 25.0%
! GTCTTAATTGTCAAATTAGT+TGG - chr3_2:69588672-69588691 Msa0420820:intron 25.0%
! TTACTATCATAATGCATTGA+TGG - chr3_2:69588975-69588994 Msa0420820:intron 25.0%
!!! TGATTAGTTTAAGACATTAG+GGG + chr3_2:69589095-69589114 None:intergenic 25.0%
! CACCATGATATTAATAATAG+TGG + chr3_2:69589621-69589640 None:intergenic 25.0%
! TAATATCATGGTGATATTAG+TGG - chr3_2:69589628-69589647 Msa0420820:intron 25.0%
! TCAATTCTATCAAAATGTAC+CGG - chr3_2:69589694-69589713 Msa0420820:intron 25.0%
! AATATCCTTGAAATTATTGG+AGG - chr3_2:69589829-69589848 Msa0420820:intron 25.0%
! ATATCCTTGAAATTATTGGA+GGG - chr3_2:69589830-69589849 Msa0420820:intron 25.0%
! TTAAATTTCAATACGAGATG+AGG + chr3_2:69589990-69590009 None:intergenic 25.0%
! ATATTTAATTCTAGACGACA+TGG - chr3_2:69590013-69590032 Msa0420820:intron 25.0%
! TGAAAAATTTGCCTAAATTG+TGG - chr3_2:69590093-69590112 Msa0420820:intron 25.0%
!!! TTTTGATTTTGGCAGAATTT+TGG + chr3_2:69590479-69590498 None:intergenic 25.0%
! AACGTAAATTTCCATAGAAA+TGG + chr3_2:69590675-69590694 None:intergenic 25.0%
! AAAAATCAACAATACTCACT+TGG - chr3_2:69590727-69590746 Msa0420820:intron 25.0%
! GTTAAAGAATGAATCTCAAA+TGG + chr3_2:69590754-69590773 None:intergenic 25.0%
! CAAAGAATTATAACTCTAGT+CGG + chr3_2:69590848-69590867 None:intergenic 25.0%
! TTGTATTTATTTATGTCGAC+AGG - chr3_2:69590865-69590884 Msa0420820:intron 25.0%
! TGTATTTATTTATGTCGACA+GGG - chr3_2:69590866-69590885 Msa0420820:intron 25.0%
!! TTGTTATTAATTTGGTTCGT+TGG - chr3_2:69591255-69591274 Msa0420820:intron 25.0%
!! AGATTCACAGTAAAATTTTC+AGG - chr3_2:69591722-69591741 Msa0420820:CDS 25.0%
!! GATTCACAGTAAAATTTTCA+GGG - chr3_2:69591723-69591742 Msa0420820:CDS 25.0%
!!! TTTCATTTTAATGTAATGGC+AGG - chr3_2:69591759-69591778 Msa0420820:CDS 25.0%
! TGATTATGTGGATAGTATAA+TGG - chr3_2:69591804-69591823 Msa0420820:CDS 25.0%
! TTAGACTGCTTGAATATTTA+AGG - chr3_2:69592147-69592166 Msa0420820:intron 25.0%
!! AAGTTTGTTTAAGACTATGT+TGG - chr3_2:69592203-69592222 Msa0420820:intron 25.0%
! TTGGATTCAACAAAACATAA+AGG - chr3_2:69592222-69592241 Msa0420820:intron 25.0%
!! TAAAAGTTTAAGATGTTGGA+TGG + chr3_2:69592267-69592286 None:intergenic 25.0%
!! CTACTAAAAGTTTAAGATGT+TGG + chr3_2:69592271-69592290 None:intergenic 25.0%
!!! TTAATATCACAGATTTTGGT+TGG + chr3_2:69592550-69592569 None:intergenic 25.0%
!! CCATTTAATATCACAGATTT+TGG + chr3_2:69592554-69592573 None:intergenic 25.0%
! CCAAAATCTGTGATATTAAA+TGG - chr3_2:69592551-69592570 Msa0420820:CDS 25.0%
! AAAAAATTACAAACTCATCC+CGG - chr3_2:69592686-69592705 Msa0420820:CDS 25.0%
!! ATAGAAAAAGCTCATTTTAC+GGG + chr3_2:69592803-69592822 None:intergenic 25.0%
! CAAGTTTAATAACCCTTATA+TGG - chr3_2:69592850-69592869 Msa0420820:intron 25.0%
! TTAATTTATCTCCCTCAATA+TGG - chr3_2:69593126-69593145 Msa0420820:intron 25.0%
!! GTTTTACATGTCATTAAAAG+TGG + chr3_2:69593163-69593182 None:intergenic 25.0%
! TTAATGACATGTAAAACACA+CGG - chr3_2:69593166-69593185 Msa0420820:five_prime_UTR 25.0%
TCTGTTATAATTATTACGCG+TGG + chr3_2:69586460-69586479 None:intergenic 30.0%
GTGTGTGTTTAGCTAAAATT+TGG + chr3_2:69586563-69586582 None:intergenic 30.0%
CTAATCTATTATTCTCCCTT+TGG - chr3_2:69586872-69586891 Msa0420820:intron 30.0%
!!! TAGTTTTGTCAAACACAACA+TGG - chr3_2:69586993-69587012 Msa0420820:intron 30.0%
!! TTTGTGTTTGCTATAGTCAT+AGG - chr3_2:69587099-69587118 Msa0420820:intron 30.0%
AAAAAAACCGAAAACAAGAC+AGG + chr3_2:69587135-69587154 None:intergenic 30.0%
TTGGAACAAGGAAACTAATA+GGG - chr3_2:69587331-69587350 Msa0420820:intron 30.0%
AAATTTGAGAAAGTCCACTT+AGG - chr3_2:69587384-69587403 Msa0420820:intron 30.0%
CAACATGACTATCTATATCA+TGG + chr3_2:69587485-69587504 None:intergenic 30.0%
!!! TTGCGATTTTTTCTGATACT+CGG - chr3_2:69587502-69587521 Msa0420820:intron 30.0%
GTAAATCAAATTTACCTGGA+GGG + chr3_2:69587544-69587563 None:intergenic 30.0%
TTTGATGAAGTTGAGAAACT+TGG - chr3_2:69588025-69588044 Msa0420820:intron 30.0%
TTGATGAAGTTGAGAAACTT+GGG - chr3_2:69588026-69588045 Msa0420820:intron 30.0%
CCTTTAACAAAACTTGAAGA+AGG + chr3_2:69588146-69588165 None:intergenic 30.0%
!!! CCTTCTTCAAGTTTTGTTAA+AGG - chr3_2:69588143-69588162 Msa0420820:CDS 30.0%
! TGTTCATATTTGTGATTTGC+TGG - chr3_2:69588200-69588219 Msa0420820:CDS 30.0%
! AAATGTTTTGTCCAATGTCA+TGG - chr3_2:69588232-69588251 Msa0420820:intron 30.0%
AAGTTATACCAAGACAAAGT+CGG + chr3_2:69588325-69588344 None:intergenic 30.0%
AGTCATTATGTGCATATGAT+TGG - chr3_2:69588394-69588413 Msa0420820:CDS 30.0%
TCATAGCTATCAATGTCAAT+AGG + chr3_2:69588430-69588449 None:intergenic 30.0%
! TATTGACATTGATAGCTATG+AGG - chr3_2:69588429-69588448 Msa0420820:CDS 30.0%
!! GTAACATGTAATTGACTTGA+TGG + chr3_2:69588459-69588478 None:intergenic 30.0%
ATTTCAAAAACATGAGCAAG+GGG + chr3_2:69588622-69588641 None:intergenic 30.0%
CATTTCAAAAACATGAGCAA+GGG + chr3_2:69588623-69588642 None:intergenic 30.0%
CTTGACTTTATTAGACGTAT+CGG + chr3_2:69588784-69588803 None:intergenic 30.0%
ACGTCTAATAAAGTCAAGAA+AGG - chr3_2:69588786-69588805 Msa0420820:CDS 30.0%
TAAAACAGTAACATCTCCTT+TGG + chr3_2:69588814-69588833 None:intergenic 30.0%
ATTATTGATCGTATTCGAGA+TGG - chr3_2:69588864-69588883 Msa0420820:CDS 30.0%
TTGAAAAGTGGCTATCAAAT+TGG + chr3_2:69589028-69589047 None:intergenic 30.0%
AAAAAAATCCGTACTGTACT+TGG - chr3_2:69589315-69589334 Msa0420820:intron 30.0%
ACAATTCATCAATATCTGTG+TGG - chr3_2:69589392-69589411 Msa0420820:intron 30.0%
CAATTCATCAATATCTGTGT+GGG - chr3_2:69589393-69589412 Msa0420820:intron 30.0%
AATTCATCAATATCTGTGTG+GGG - chr3_2:69589394-69589413 Msa0420820:intron 30.0%
TATACCATGCATTATTTGGT+TGG - chr3_2:69589432-69589451 Msa0420820:intron 30.0%
! AAAAGTATAAGCAACTCAAG+AGG + chr3_2:69589519-69589538 None:intergenic 30.0%
! GTTTTTGTTCTGTAAAGAGA+GGG - chr3_2:69589547-69589566 Msa0420820:intron 30.0%
! TTTTTGTTCTGTAAAGAGAG+GGG - chr3_2:69589548-69589567 Msa0420820:intron 30.0%
ACAGACTATCAACAGTATTT+CGG - chr3_2:69589792-69589811 Msa0420820:intron 30.0%
TATCCTTGAAATTATTGGAG+GGG - chr3_2:69589831-69589850 Msa0420820:intron 30.0%
TGGTTAAATAACTGATTGTG+GGG + chr3_2:69590123-69590142 None:intergenic 30.0%
GTGGTTAAATAACTGATTGT+GGG + chr3_2:69590124-69590143 None:intergenic 30.0%
AGTGGTTAAATAACTGATTG+TGG + chr3_2:69590125-69590144 None:intergenic 30.0%
CTAAAATGTATGTCTCTTCA+TGG - chr3_2:69590271-69590290 Msa0420820:intron 30.0%
TGTCTTCTTTCATGATTGAA+TGG - chr3_2:69590317-69590336 Msa0420820:intron 30.0%
GTCTTCTTTCATGATTGAAT+GGG - chr3_2:69590318-69590337 Msa0420820:intron 30.0%
!! AAGTTATTTCTCTTACCATG+TGG - chr3_2:69590406-69590425 Msa0420820:CDS 30.0%
TATGAGAAAAGAGAAAAGAG+AGG + chr3_2:69590513-69590532 None:intergenic 30.0%
TATTTCCTATTCCACTAGAT+AGG - chr3_2:69590531-69590550 Msa0420820:CDS 30.0%
TTTATCCTATCTAGTGGAAT+AGG + chr3_2:69590539-69590558 None:intergenic 30.0%
TATTCCACTAGATAGGATAA+AGG - chr3_2:69590538-69590557 Msa0420820:CDS 30.0%
! TTTTCCTTTATCCTATCTAG+TGG + chr3_2:69590545-69590564 None:intergenic 30.0%
TGAGTCTTGAAAGTTGTTTA+AGG + chr3_2:69590574-69590593 None:intergenic 30.0%
TGGTGAGTAGTAAAACTTAT+TGG - chr3_2:69591120-69591139 Msa0420820:CDS 30.0%
CTATTTATGAGCCTCAAATA+GGG - chr3_2:69591220-69591239 Msa0420820:CDS 30.0%
TATTTATGAGCCTCAAATAG+GGG - chr3_2:69591221-69591240 Msa0420820:CDS 30.0%
TGATTAATAAGTAGCACATG+TGG - chr3_2:69591496-69591515 Msa0420820:intron 30.0%
GATATTGTCAAACTTCAACA+TGG - chr3_2:69591627-69591646 Msa0420820:intron 30.0%
AGAATATATCTCTCTTGGAA+AGG - chr3_2:69591650-69591669 Msa0420820:CDS 30.0%
ATATTAGCTAACCTTGGAAA+TGG + chr3_2:69591980-69591999 None:intergenic 30.0%
! ATAATCCATCGATTAAATCC+TGG + chr3_2:69592030-69592049 None:intergenic 30.0%
ATAAACCTGATTCAGAAGTA+TGG + chr3_2:69592361-69592380 None:intergenic 30.0%
TGCAAGATGTTCATGTTTAA+AGG - chr3_2:69592763-69592782 Msa0420820:five_prime_UTR 30.0%
GCAAGATGTTCATGTTTAAA+GGG - chr3_2:69592764-69592783 Msa0420820:five_prime_UTR 30.0%
AATAACCCTTATATGGTAGA+TGG - chr3_2:69592857-69592876 Msa0420820:intron 30.0%
ATAAGCCATCTACCATATAA+GGG + chr3_2:69592865-69592884 None:intergenic 30.0%
AATAAGCCATCTACCATATA+AGG + chr3_2:69592866-69592885 None:intergenic 30.0%
CTGAAGATCATCATTGAATT+TGG + chr3_2:69593034-69593053 None:intergenic 30.0%
CAAAAACATAGTCAGCATAA+TGG - chr3_2:69593194-69593213 Msa0420820:five_prime_UTR 30.0%
TTATAGTCATTCTACATGAC+TGG - chr3_2:69593256-69593275 Msa0420820:five_prime_UTR 30.0%
TAGCATTTCATCGTAACCAA+AGG - chr3_2:69586601-69586620 Msa0420820:three_prime_UTR 35.0%
GAGCAAAGAGAATTAATTGG+AGG + chr3_2:69586779-69586798 None:intergenic 35.0%
TGTATGTATCTGAATCTGAG+TGG + chr3_2:69586821-69586840 None:intergenic 35.0%
!! ACATTTGGGTTGAAAGATCA+TGG - chr3_2:69587066-69587085 Msa0420820:intron 35.0%
TTGAAAGATCATGGAGAACT+TGG - chr3_2:69587075-69587094 Msa0420820:intron 35.0%
!!! CATTGTTCCTGTCTTGTTTT+CGG - chr3_2:69587125-69587144 Msa0420820:intron 35.0%
AAGAAGAAAGGTAAAGTACG+TGG - chr3_2:69587162-69587181 Msa0420820:intron 35.0%
TAATGCTCGATATTCTGAGT+TGG - chr3_2:69587227-69587246 Msa0420820:intron 35.0%
TCAAATAAATGAGCCATGGT+TGG + chr3_2:69587276-69587295 None:intergenic 35.0%
TTGCTCAAATAAATGAGCCA+TGG + chr3_2:69587280-69587299 None:intergenic 35.0%
CTTGGAACAAGGAAACTAAT+AGG - chr3_2:69587330-69587349 Msa0420820:intron 35.0%
AACAAGGAAACTAATAGGGA+AGG - chr3_2:69587335-69587354 Msa0420820:intron 35.0%
!! GAGTTTGTTACATCTAGTGA+TGG - chr3_2:69587357-69587376 Msa0420820:intron 35.0%
TCCACTTAGGAGAATATGAA+TGG - chr3_2:69587397-69587416 Msa0420820:intron 35.0%
CCACTTAGGAGAATATGAAT+GGG - chr3_2:69587398-69587417 Msa0420820:intron 35.0%
GAATATGAATGGGAAACCTA+TGG - chr3_2:69587408-69587427 Msa0420820:intron 35.0%
!!! TGCGATTTTTTCTGATACTC+GGG - chr3_2:69587503-69587522 Msa0420820:intron 35.0%
GGTAAATCAAATTTACCTGG+AGG + chr3_2:69587545-69587564 None:intergenic 35.0%
GCTGGTAAATCAAATTTACC+TGG + chr3_2:69587548-69587567 None:intergenic 35.0%
! TGAGTCATTCCATTAACTTG+AGG - chr3_2:69587578-69587597 Msa0420820:intron 35.0%
CGATATAAGCCTCAAGTTAA+TGG + chr3_2:69587590-69587609 None:intergenic 35.0%
!! TACTTGCTATGCTATACTTC+AGG - chr3_2:69587637-69587656 Msa0420820:intron 35.0%
!! ACTTGCTATGCTATACTTCA+GGG - chr3_2:69587638-69587657 Msa0420820:intron 35.0%
GTCACTATTTATGCTTCTCT+AGG - chr3_2:69587686-69587705 Msa0420820:intron 35.0%
TATTTATGCTTCTCTAGGTG+AGG - chr3_2:69587691-69587710 Msa0420820:intron 35.0%
ACAGATCAGAGTAGATACTT+GGG + chr3_2:69587867-69587886 None:intergenic 35.0%
TACGTTCTATAGTAAGCATC+AGG + chr3_2:69588277-69588296 None:intergenic 35.0%
CCATTTCAAAAACATGAGCA+AGG + chr3_2:69588624-69588643 None:intergenic 35.0%
!! CCTTGCTCATGTTTTTGAAA+TGG - chr3_2:69588621-69588640 Msa0420820:intron 35.0%
ATGCTGTCTCTAAATTACTC+TGG - chr3_2:69588695-69588714 Msa0420820:intron 35.0%
AAAGTCAAGAAAGGAACCAA+AGG - chr3_2:69588795-69588814 Msa0420820:CDS 35.0%
CGAATACGATCAATAATAGC+TGG + chr3_2:69588861-69588880 None:intergenic 35.0%
TCGAGATGGAGTTGTAAAAA+AGG - chr3_2:69588878-69588897 Msa0420820:intron 35.0%
!! TGATGGTCTTGTTAGATATC+TGG - chr3_2:69588992-69589011 Msa0420820:intron 35.0%
! GTCTTGTTAGATATCTGGAT+AGG - chr3_2:69588997-69589016 Msa0420820:intron 35.0%
AGCAATTCGTGATTGAAAAG+TGG + chr3_2:69589040-69589059 None:intergenic 35.0%
ACATTAGGGGAAAGTGAAAA+AGG + chr3_2:69589082-69589101 None:intergenic 35.0%
AGACAAAATAGGTAAGAGTC+AGG + chr3_2:69589138-69589157 None:intergenic 35.0%
AAGAGTCAGGAAGACAAAAT+AGG + chr3_2:69589125-69589144 None:intergenic 35.0%
CTCTTACCTGTATTGTACTT+AGG - chr3_2:69589164-69589183 Msa0420820:intron 35.0%
TTACCTGTATTGTACTTAGG+TGG - chr3_2:69589167-69589186 Msa0420820:intron 35.0%
TGCAATCTGGAAAAGATTCT+TGG + chr3_2:69589211-69589230 None:intergenic 35.0%
GATGAATTGTTGTGAATCTC+CGG + chr3_2:69589382-69589401 None:intergenic 35.0%
AGTTCCAACCAAATAATGCA+TGG + chr3_2:69589439-69589458 None:intergenic 35.0%
TGTGTGTATGCATATGTAGT+TGG - chr3_2:69589482-69589501 Msa0420820:intron 35.0%
! GGTTTTTGTTCTGTAAAGAG+AGG - chr3_2:69589546-69589565 Msa0420820:intron 35.0%
! TTTTGTTCTGTAAAGAGAGG+GGG - chr3_2:69589549-69589568 Msa0420820:intron 35.0%
CAGAAATTGATGAATAACGC+TGG + chr3_2:69589672-69589691 None:intergenic 35.0%
CAGCGTTATTCATCAATTTC+TGG - chr3_2:69589670-69589689 Msa0420820:intron 35.0%
AATTACAGGTCATAGCTCAA+AGG + chr3_2:69589730-69589749 None:intergenic 35.0%
!!! TATTTTGAGGTACTCAAACC+TGG + chr3_2:69589765-69589784 None:intergenic 35.0%
! GTCTGTTTGACTCTATTTTG+AGG + chr3_2:69589778-69589797 None:intergenic 35.0%
CAGACTATCAACAGTATTTC+GGG - chr3_2:69589793-69589812 Msa0420820:intron 35.0%
!!! ACATAGGCTTTTGAAATGGT+TGG + chr3_2:69589883-69589902 None:intergenic 35.0%
!! CACAACATAGGCTTTTGAAA+TGG + chr3_2:69589887-69589906 None:intergenic 35.0%
AATTTCAATACGAGATGAGG+TGG + chr3_2:69589987-69590006 None:intergenic 35.0%
ATTCTAGACGACATGGTATT+AGG - chr3_2:69590020-69590039 Msa0420820:intron 35.0%
TTCTAGACGACATGGTATTA+GGG - chr3_2:69590021-69590040 Msa0420820:intron 35.0%
GGTTAAATAACTGATTGTGG+GGG + chr3_2:69590122-69590141 None:intergenic 35.0%
TACAACACCTTTAGTGTGTT+GGG - chr3_2:69590167-69590186 Msa0420820:intron 35.0%
!!! TCTTTTAGAGTCATATCCCT+AGG + chr3_2:69590220-69590239 None:intergenic 35.0%
AACAACTTTCAAGACTCATG+AGG - chr3_2:69590576-69590595 Msa0420820:intron 35.0%
ACAACTTTCAAGACTCATGA+GGG - chr3_2:69590577-69590596 Msa0420820:intron 35.0%
CATACCTTAATGTAGCAACA+AGG + chr3_2:69590990-69591009 None:intergenic 35.0%
GCTATTTATGAGCCTCAAAT+AGG - chr3_2:69591219-69591238 Msa0420820:CDS 35.0%
ATTTATGAGCCTCAAATAGG+GGG - chr3_2:69591222-69591241 Msa0420820:CDS 35.0%
!! TGGTTGTATAGCTTGTTTCT+TGG - chr3_2:69591275-69591294 Msa0420820:intron 35.0%
!! GGTTGTATAGCTTGTTTCTT+GGG - chr3_2:69591276-69591295 Msa0420820:intron 35.0%
! TAAAACTGATGAAGCGTTCA+AGG - chr3_2:69591396-69591415 Msa0420820:intron 35.0%
!!! TGGTTTTATACTGGTGACAT+TGG - chr3_2:69591558-69591577 Msa0420820:intron 35.0%
!! GGTTTTATACTGGTGACATT+GGG - chr3_2:69591559-69591578 Msa0420820:intron 35.0%
CATGGAGAATATATCTCTCT+TGG - chr3_2:69591645-69591664 Msa0420820:CDS 35.0%
TTTAATGTAATGGCAGGTTG+AGG - chr3_2:69591765-69591784 Msa0420820:CDS 35.0%
GTATTCGATACCAGTTTCTT+GGG + chr3_2:69591902-69591921 None:intergenic 35.0%
TGTATTCGATACCAGTTTCT+TGG + chr3_2:69591903-69591922 None:intergenic 35.0%
! TTCCAAGGTTAGCTAATATG+TGG - chr3_2:69591981-69592000 Msa0420820:intron 35.0%
ATCCACATATTAGCTAACCT+TGG + chr3_2:69591986-69592005 None:intergenic 35.0%
TCGGCATCTTAATTTAAGTG+TGG + chr3_2:69592103-69592122 None:intergenic 35.0%
! AAGTTTAAGATGTTGGATGG+AGG + chr3_2:69592264-69592283 None:intergenic 35.0%
TGATCAATCTCTTGACCATT+AGG + chr3_2:69592329-69592348 None:intergenic 35.0%
! GAACAGAAAAGTATGTGTTG+TGG - chr3_2:69592595-69592614 Msa0420820:CDS 35.0%
GACCAATAGACTAGTAAGAA+AGG - chr3_2:69592731-69592750 Msa0420820:CDS 35.0%
! CACCTTTCTTACTAGTCTAT+TGG + chr3_2:69592736-69592755 None:intergenic 35.0%
CAATAGACTAGTAAGAAAGG+TGG - chr3_2:69592734-69592753 Msa0420820:CDS 35.0%
GATGTTCATGTTTAAAGGGA+TGG - chr3_2:69592768-69592787 Msa0420820:five_prime_UTR 35.0%
ACAGATAGTACATTGACATG+AGG + chr3_2:69593081-69593100 None:intergenic 35.0%
AAGTGCATCAACCATATTGA+GGG + chr3_2:69593140-69593159 None:intergenic 35.0%
TTAGCTAAACACACACACGT+TGG - chr3_2:69586567-69586586 Msa0420820:three_prime_UTR 40.0%
AACAAAAGGATTCTCTGTCG+TGG + chr3_2:69586634-69586653 None:intergenic 40.0%
CACAACATGGTTGATCCAAA+CGG - chr3_2:69587006-69587025 Msa0420820:intron 40.0%
TTGGTTGAAGTTCCTTGGAA+AGG - chr3_2:69587246-69587265 Msa0420820:intron 40.0%
TTGTTACATCTAGTGATGGC+AGG - chr3_2:69587361-69587380 Msa0420820:intron 40.0%
CCCATTCATATTCTCCTAAG+TGG + chr3_2:69587401-69587420 None:intergenic 40.0%
AAGAAGACCGGATGCAAAAT+TGG + chr3_2:69587454-69587473 None:intergenic 40.0%
ATGACTCAACGAAATGAAGC+TGG + chr3_2:69587566-69587585 None:intergenic 40.0%
TTGCTTCCGGCAGAATATAA+CGG - chr3_2:69587661-69587680 Msa0420820:intron 40.0%
CACAGATCAGAGTAGATACT+TGG + chr3_2:69587868-69587887 None:intergenic 40.0%
CGTAAAGCTGCTGAATAAAC+TGG - chr3_2:69587889-69587908 Msa0420820:CDS 40.0%
! CTTTGAAGACGATAGCAAAG+AGG - chr3_2:69587955-69587974 Msa0420820:CDS 40.0%
!!! GAGGAACATGCTTTTTCAGA+AGG - chr3_2:69587974-69587993 Msa0420820:intron 40.0%
GCAGTTGTCATGTATACAAG+TGG - chr3_2:69588094-69588113 Msa0420820:intron 40.0%
ATGTATACAAGTGGCAGTAC+AGG - chr3_2:69588103-69588122 Msa0420820:CDS 40.0%
! TAGGGTGTCATGATTACTCA+CGG - chr3_2:69588517-69588536 Msa0420820:intron 40.0%
ATGACTGTGGTTCCAAATCT+AGG - chr3_2:69588568-69588587 Msa0420820:intron 40.0%
!!! TGTTTTTGAAATGGCAGCAG+AGG - chr3_2:69588630-69588649 Msa0420820:intron 40.0%
! AAAACCTACCCTTTTGACAG+CGG - chr3_2:69588833-69588852 Msa0420820:CDS 40.0%
CGCAGATGAAAATGTTGATG+TGG + chr3_2:69588917-69588936 None:intergenic 40.0%
GTACAATACAGGTAAGAGTC+AGG + chr3_2:69589162-69589181 None:intergenic 40.0%
TGTACTTAGGTGGAGGAAAA+AGG - chr3_2:69589177-69589196 Msa0420820:intron 40.0%
GTACTTAGGTGGAGGAAAAA+GGG - chr3_2:69589178-69589197 Msa0420820:intron 40.0%
TACTTAGGTGGAGGAAAAAG+GGG - chr3_2:69589179-69589198 Msa0420820:intron 40.0%
AAAATCCGTACTGTACTTGG+AGG - chr3_2:69589318-69589337 Msa0420820:intron 40.0%
AACCTCCGATTTATGCTTTG+TGG - chr3_2:69589342-69589361 Msa0420820:intron 40.0%
TGTTGTGAATCTCCGGATAA+AGG + chr3_2:69589375-69589394 None:intergenic 40.0%
ACACCCCTCCAATAATTTCA+AGG + chr3_2:69589837-69589856 None:intergenic 40.0%
TTGAAATTATTGGAGGGGTG+TGG - chr3_2:69589836-69589855 Msa0420820:intron 40.0%
! TGAAATTATTGGAGGGGTGT+GGG - chr3_2:69589837-69589856 Msa0420820:intron 40.0%
CCATTCATGTAGCACAACAT+AGG + chr3_2:69589899-69589918 None:intergenic 40.0%
CCTATGTTGTGCTACATGAA+TGG - chr3_2:69589896-69589915 Msa0420820:intron 40.0%
TCTAGACGACATGGTATTAG+GGG - chr3_2:69590022-69590041 Msa0420820:intron 40.0%
!! ACACTAAAGGTGTTGTACCA+GGG + chr3_2:69590164-69590183 None:intergenic 40.0%
GTACAACACCTTTAGTGTGT+TGG - chr3_2:69590166-69590185 Msa0420820:intron 40.0%
! TTTAGAGTCATATCCCTAGG+CGG + chr3_2:69590217-69590236 None:intergenic 40.0%
TTCTCTTACCATGTGGTATG+TGG - chr3_2:69590413-69590432 Msa0420820:CDS 40.0%
CAACTTTCAAGACTCATGAG+GGG - chr3_2:69590578-69590597 Msa0420820:intron 40.0%
CTAGAAAGAGAAGGATGCAA+TGG + chr3_2:69590628-69590647 None:intergenic 40.0%
CATGAGAGACTAGAAAGAGA+AGG + chr3_2:69590637-69590656 None:intergenic 40.0%
AGACGCTCAAACCATTTCTA+TGG - chr3_2:69590661-69590680 Msa0420820:intron 40.0%
AACTCTAGTCGGACAAAAAG+AGG + chr3_2:69590837-69590856 None:intergenic 40.0%
AAACCATATCCTTGCCCAAT+GGG + chr3_2:69590894-69590913 None:intergenic 40.0%
GTTTGACCGAAACATTTGCT+GGG - chr3_2:69590910-69590929 Msa0420820:CDS 40.0%
! TTTGACCGAAACATTTGCTG+GGG - chr3_2:69590911-69590930 Msa0420820:CDS 40.0%
TTAATGTAGCAACAAGGCAG+AGG + chr3_2:69590984-69591003 None:intergenic 40.0%
! TCTGCCTTGTTGCTACATTA+AGG - chr3_2:69590983-69591002 Msa0420820:CDS 40.0%
GCTGTTATAGAACTTGCAGT+TGG - chr3_2:69591195-69591214 Msa0420820:CDS 40.0%
TTTATGAGCCTCAAATAGGG+GGG - chr3_2:69591223-69591242 Msa0420820:CDS 40.0%
!! TAGCTTGTTTCTTGGGAAGA+AGG - chr3_2:69591283-69591302 Msa0420820:intron 40.0%
! TTGTTTCTTGGGAAGAAGGA+GGG - chr3_2:69591287-69591306 Msa0420820:intron 40.0%
!! AGAAGGAGGGTATCTATCAT+CGG - chr3_2:69591300-69591319 Msa0420820:intron 40.0%
!! GCACATGTGGTTTTTCAACT+TGG - chr3_2:69591509-69591528 Msa0420820:intron 40.0%
!! GTGGTTTTTCAACTTGGTAC+AGG - chr3_2:69591515-69591534 Msa0420820:intron 40.0%
!! TTGGTACAGGTTGATGAGAA+AGG - chr3_2:69591528-69591547 Msa0420820:intron 40.0%
TCTTCCTATCGATGATTTCG+AGG + chr3_2:69591605-69591624 None:intergenic 40.0%
CGAAATCATCGATAGGAAGA+AGG - chr3_2:69591605-69591624 Msa0420820:intron 40.0%
!!! GTCGTGATTTTAGAACGACA+AGG + chr3_2:69591690-69591709 None:intergenic 40.0%
CAACACAGTAACTGTGAAAG+GGG + chr3_2:69591840-69591859 None:intergenic 40.0%
GCAACACAGTAACTGTGAAA+GGG + chr3_2:69591841-69591860 None:intergenic 40.0%
AGCAACACAGTAACTGTGAA+AGG + chr3_2:69591842-69591861 None:intergenic 40.0%
!! TCAGGTTTGTTACAGAGATC+AGG + chr3_2:69591934-69591953 None:intergenic 40.0%
GTGGATAGTTACTTGTTTGC+TGG - chr3_2:69592000-69592019 Msa0420820:intron 40.0%
GCTATCCAGGATTTAATCGA+TGG - chr3_2:69592022-69592041 Msa0420820:intron 40.0%
TCTTGACCATTAGGTCATTG+CGG + chr3_2:69592320-69592339 None:intergenic 40.0%
! CTGATTCAGAAGTATGGATG+CGG + chr3_2:69592355-69592374 None:intergenic 40.0%
!! CAAGAGCGCTTCAAATTTGA+GGG + chr3_2:69592414-69592433 None:intergenic 40.0%
! TTGAAGCGCTCTTGCATTAT+AGG - chr3_2:69592420-69592439 Msa0420820:CDS 40.0%
! TGAAGCGCTCTTGCATTATA+GGG - chr3_2:69592421-69592440 Msa0420820:CDS 40.0%
! TTGTGCACATGATTCGAGTT+GGG - chr3_2:69592447-69592466 Msa0420820:CDS 40.0%
TCCTGCAAAGATTAAGCTGT+TGG - chr3_2:69592939-69592958 Msa0420820:intron 40.0%
TGCAAAGATTAAGCTGTTGG+CGG - chr3_2:69592942-69592961 Msa0420820:intron 40.0%
GCAGTAACTAATCCAGATTC+AGG + chr3_2:69592979-69592998 None:intergenic 40.0%
GTCAATGTACTATCTGTTGC+AGG - chr3_2:69593084-69593103 Msa0420820:intron 40.0%
GAAGTGCATCAACCATATTG+AGG + chr3_2:69593141-69593160 None:intergenic 40.0%
CTGTCGTGGAACAATACCTT+TGG + chr3_2:69586620-69586639 None:intergenic 45.0%
ATCCAAACGGTAGTTCCTCA+TGG - chr3_2:69587019-69587038 Msa0420820:intron 45.0%
AACCATGAGGAACTACCGTT+TGG + chr3_2:69587024-69587043 None:intergenic 45.0%
AGGTAAAGTACGTGGTGTTC+CGG - chr3_2:69587170-69587189 Msa0420820:intron 45.0%
GATTCACCACTAACTTCCAC+CGG + chr3_2:69587192-69587211 None:intergenic 45.0%
GGTGGAAGTTAGTGGTGAAT+CGG - chr3_2:69587191-69587210 Msa0420820:intron 45.0%
GTGGAAGTTAGTGGTGAATC+GGG - chr3_2:69587192-69587211 Msa0420820:intron 45.0%
!! CTGAGTTGGTTGAAGTTCCT+TGG - chr3_2:69587241-69587260 Msa0420820:intron 45.0%
TGAATGGGAAACCTATGGAG+AGG - chr3_2:69587413-69587432 Msa0420820:intron 45.0%
ATGGCCTAGCTTAAGAAGAC+CGG + chr3_2:69587466-69587485 None:intergenic 45.0%
CTATACTTCAGGGTTGCTTC+CGG - chr3_2:69587648-69587667 Msa0420820:intron 45.0%
TGACGACCGTTATATTCTGC+CGG + chr3_2:69587670-69587689 None:intergenic 45.0%
TCTGATTCACTCACTGAACG+AGG - chr3_2:69587718-69587737 Msa0420820:intron 45.0%
GCATTCTTGGAAGGTAAGCT+TGG + chr3_2:69588070-69588089 None:intergenic 45.0%
ACTGCAACAGCATTCTTGGA+AGG + chr3_2:69588079-69588098 None:intergenic 45.0%
GACAACTGCAACAGCATTCT+TGG + chr3_2:69588083-69588102 None:intergenic 45.0%
! AGGGTGTCATGATTACTCAC+GGG - chr3_2:69588518-69588537 Msa0420820:intron 45.0%
GGTTCCAAATCTAGGTAGCA+AGG - chr3_2:69588576-69588595 Msa0420820:intron 45.0%
ACGTCCTTGCTACCTAGATT+TGG + chr3_2:69588583-69588602 None:intergenic 45.0%
! GCAGGTGTTGCAATTGGTTA+CGG - chr3_2:69588741-69588760 Msa0420820:intron 45.0%
! GACGTATCGGTCAAAGTCAT+AGG + chr3_2:69588771-69588790 None:intergenic 45.0%
CCTCCACCTAAGTACAATAC+AGG + chr3_2:69589173-69589192 None:intergenic 45.0%
CCTGTATTGTACTTAGGTGG+AGG - chr3_2:69589170-69589189 Msa0420820:intron 45.0%
ACTTAGGTGGAGGAAAAAGG+GGG - chr3_2:69589180-69589199 Msa0420820:intron 45.0%
! TTCCTTTTACAGCAGCCAGT+CGG + chr3_2:69589242-69589261 None:intergenic 45.0%
CTCCGATTTATGCTTTGTGG+CGG - chr3_2:69589345-69589364 Msa0420820:intron 45.0%
CTCCGCCACAAAGCATAAAT+CGG + chr3_2:69589350-69589369 None:intergenic 45.0%
! GAAATTATTGGAGGGGTGTG+GGG - chr3_2:69589838-69589857 Msa0420820:intron 45.0%
! CGACATGGTATTAGGGGTTT+TGG - chr3_2:69590028-69590047 Msa0420820:intron 45.0%
!! AGGGGTTTTGGTACCATGTT+CGG - chr3_2:69590040-69590059 Msa0420820:intron 45.0%
!! CACACTAAAGGTGTTGTACC+AGG + chr3_2:69590165-69590184 None:intergenic 45.0%
! ACCTTTAGTGTGTTGGGTTG+AGG - chr3_2:69590173-69590192 Msa0420820:intron 45.0%
!! CCTTTAGTGTGTTGGGTTGA+GGG - chr3_2:69590174-69590193 Msa0420820:intron 45.0%
!! CTTTAGTGTGTTGGGTTGAG+GGG - chr3_2:69590175-69590194 Msa0420820:intron 45.0%
TAGTCGGACAAAAAGAGGTG+TGG + chr3_2:69590832-69590851 None:intergenic 45.0%
CAAACCATATCCTTGCCCAA+TGG + chr3_2:69590895-69590914 None:intergenic 45.0%
GGTTTGACCGAAACATTTGC+TGG - chr3_2:69590909-69590928 Msa0420820:CDS 45.0%
TTATGAGCCTCAAATAGGGG+GGG - chr3_2:69591224-69591243 Msa0420820:CDS 45.0%
! CTTGTTTCTTGGGAAGAAGG+AGG - chr3_2:69591286-69591305 Msa0420820:intron 45.0%
ACTCGCGTCATGTGATTATG+TGG - chr3_2:69591792-69591811 Msa0420820:CDS 45.0%
! ACGTCAGTCTCTGGAAAAGT+GGG - chr3_2:69591876-69591895 Msa0420820:CDS 45.0%
! TACTTGTTTGCTGGCTATCC+AGG - chr3_2:69592009-69592028 Msa0420820:intron 45.0%
GGATGGAGGTTGTGTAATGA+TGG + chr3_2:69592250-69592269 None:intergenic 45.0%
CGCATCCATACTTCTGAATC+AGG - chr3_2:69592353-69592372 Msa0420820:CDS 45.0%
!! GCAAGAGCGCTTCAAATTTG+AGG + chr3_2:69592415-69592434 None:intergenic 45.0%
GTTGTGCACATGATTCGAGT+TGG - chr3_2:69592446-69592465 Msa0420820:CDS 45.0%
TGACCATGTGAGCTAATGAC+CGG + chr3_2:69592708-69592727 None:intergenic 45.0%
GCCAACAGCTTAATCTTTGC+AGG + chr3_2:69592943-69592962 None:intergenic 45.0%
AATCCAGATTCAGGTGTCCA+TGG + chr3_2:69592970-69592989 None:intergenic 45.0%
TAAAGTACGTGGTGTTCCGG+TGG - chr3_2:69587173-69587192 Msa0420820:intron 50.0%
ATGGTTGGAGCTCCTTTCCA+AGG + chr3_2:69587261-69587280 None:intergenic 50.0%
TTGGAAAGGAGCTCCAACCA+TGG - chr3_2:69587260-69587279 Msa0420820:intron 50.0%
! CGCGTGTCCAATTTTGCATC+CGG - chr3_2:69587444-69587463 Msa0420820:intron 50.0%
GCATCCGGTCTTCTTAAGCT+AGG - chr3_2:69587459-69587478 Msa0420820:intron 50.0%
TTTCTGATACTCGGGCTGAG+TGG - chr3_2:69587511-69587530 Msa0420820:intron 50.0%
! GAAGGTAAGCTTGGTTCGAC+GGG + chr3_2:69588061-69588080 None:intergenic 50.0%
! GGAAGGTAAGCTTGGTTCGA+CGG + chr3_2:69588062-69588081 None:intergenic 50.0%
TACAAGTGGCAGTACAGGTC+TGG - chr3_2:69588108-69588127 Msa0420820:CDS 50.0%
! GTCGAGAACCGACTTTGTCT+TGG - chr3_2:69588314-69588333 Msa0420820:intron 50.0%
AGTCATAACAGCTGCTGTGG+TGG + chr3_2:69588554-69588573 None:intergenic 50.0%
CACAGTCATAACAGCTGCTG+TGG + chr3_2:69588557-69588576 None:intergenic 50.0%
CACAGCAGCTGTTATGACTG+TGG - chr3_2:69588555-69588574 Msa0420820:intron 50.0%
AGGTAGCAAGGACGTGTACT+TGG - chr3_2:69588588-69588607 Msa0420820:intron 50.0%
CTGCAGCAAGCATAACAGAC+TGG + chr3_2:69588725-69588744 None:intergenic 50.0%
! CAGTCTGTTATGCTTGCTGC+AGG - chr3_2:69588723-69588742 Msa0420820:intron 50.0%
! CTTGCTGCAGGTGTTGCAAT+TGG - chr3_2:69588735-69588754 Msa0420820:intron 50.0%
AGCTGGTACCGCTGTCAAAA+GGG + chr3_2:69588844-69588863 None:intergenic 50.0%
TAGCTGGTACCGCTGTCAAA+AGG + chr3_2:69588845-69588864 None:intergenic 50.0%
TGGCTGCTGTAAAAGGAAGC+TGG - chr3_2:69589244-69589263 Msa0420820:intron 50.0%
GCTGTAAAAGGAAGCTGGCT+AGG - chr3_2:69589249-69589268 Msa0420820:intron 50.0%
GGTTGCCTCCAAGTACAGTA+CGG + chr3_2:69589326-69589345 None:intergenic 50.0%
CGCCACAAAGCATAAATCGG+AGG + chr3_2:69589347-69589366 None:intergenic 50.0%
! ATCAAAATGTACCGGCGCTC+TGG - chr3_2:69589702-69589721 Msa0420820:intron 50.0%
! TCAAAATGTACCGGCGCTCT+GGG - chr3_2:69589703-69589722 Msa0420820:intron 50.0%
GACCTGTAATTTCACACGCG+AGG - chr3_2:69589739-69589758 Msa0420820:intron 50.0%
! CTCTCCTGCAAGAGCTTTGT+GGG - chr3_2:69589937-69589956 Msa0420820:intron 50.0%
TCAACCCACAAAGCTCTTGC+AGG + chr3_2:69589944-69589963 None:intergenic 50.0%
! GAGCTTTGTGGGTTGAAGTG+TGG - chr3_2:69589948-69589967 Msa0420820:intron 50.0%
! TTGGTACCATGTTCGGTGAC+TGG - chr3_2:69590047-69590066 Msa0420820:intron 50.0%
TACTCACCAGTCACCGAACA+TGG + chr3_2:69590056-69590075 None:intergenic 50.0%
TGTGGGGGTTGCCACAATTT+AGG + chr3_2:69590107-69590126 None:intergenic 50.0%
GGCAATGAAGGCAGACTAAG+TGG + chr3_2:69590143-69590162 None:intergenic 50.0%
TTAGTCTGCCTTCATTGCCC+TGG - chr3_2:69590144-69590163 Msa0420820:intron 50.0%
GTGTTGTACCAGGGCAATGA+AGG + chr3_2:69590155-69590174 None:intergenic 50.0%
CCCTCAACCCAACACACTAA+AGG + chr3_2:69590177-69590196 None:intergenic 50.0%
! TTTTAGTCGCACACCGCCTA+GGG - chr3_2:69590201-69590220 Msa0420820:intron 50.0%
ATGTAGCAACAAGGCAGAGG+TGG + chr3_2:69590981-69591000 None:intergenic 50.0%
TATGAGCCTCAAATAGGGGG+GGG - chr3_2:69591225-69591244 Msa0420820:CDS 50.0%
CAAATTCCCCCCCCTATTTG+AGG + chr3_2:69591234-69591253 None:intergenic 50.0%
! TTGATGAGAAAGGTGTGCGC+TGG - chr3_2:69591538-69591557 Msa0420820:intron 50.0%
!!! GGTGTGCGCTGGTTTTATAC+TGG - chr3_2:69591549-69591568 Msa0420820:intron 50.0%
ATTGGGCGATTCCATCCTGA+TGG - chr3_2:69591576-69591595 Msa0420820:intron 50.0%
TTGGGCGATTCCATCCTGAT+GGG - chr3_2:69591577-69591596 Msa0420820:intron 50.0%
! ATGATTTCGAGGCACCCATC+AGG + chr3_2:69591594-69591613 None:intergenic 50.0%
GGTGCCTCGAAATCATCGAT+AGG - chr3_2:69591598-69591617 Msa0420820:intron 50.0%
! TGTTGCTTCACGTCAGTCTC+TGG - chr3_2:69591867-69591886 Msa0420820:CDS 50.0%
! CACGTCAGTCTCTGGAAAAG+TGG - chr3_2:69591875-69591894 Msa0420820:CDS 50.0%
GAAAAGTGGGCCCAAGAAAC+TGG - chr3_2:69591889-69591908 Msa0420820:CDS 50.0%
CAAACCTGAAGCTGTCACTG+AGG - chr3_2:69591945-69591964 Msa0420820:intron 50.0%
AGAACCTCAGTGACAGCTTC+AGG + chr3_2:69591952-69591971 None:intergenic 50.0%
GGTTCTGCAGTCCATTTCCA+AGG - chr3_2:69591966-69591985 Msa0420820:intron 50.0%
GCGGCTCAAGTAACATGTCA+AGG + chr3_2:69592301-69592320 None:intergenic 50.0%
CTTGAGCCGCAATGACCTAA+TGG - chr3_2:69592311-69592330 Msa0420820:CDS 50.0%
GAGCGCTTCAAATTTGAGGG+TGG + chr3_2:69592411-69592430 None:intergenic 50.0%
!! TGCACATGATTCGAGTTGGG+TGG - chr3_2:69592450-69592469 Msa0420820:CDS 50.0%
ATCCCGGTCATTAGCTCACA+TGG - chr3_2:69592702-69592721 Msa0420820:CDS 50.0%
GACCATGTGAGCTAATGACC+GGG + chr3_2:69592707-69592726 None:intergenic 50.0%
GGTCATTAGCTCACATGGTC+AGG - chr3_2:69592707-69592726 Msa0420820:CDS 50.0%
! TTAAGCTGTTGGCGGATCCA+TGG - chr3_2:69592950-69592969 Msa0420820:intron 50.0%
GATCCATGGACACCTGAATC+TGG - chr3_2:69592964-69592983 Msa0420820:intron 50.0%
GGTGTTCCGGTGGAAGTTAG+TGG - chr3_2:69587183-69587202 Msa0420820:intron 55.0%
GCGAGCAAAGACCTCTCCAT+AGG + chr3_2:69587427-69587446 None:intergenic 55.0%
TGAGTGGTTCATTGCCCTCC+AGG - chr3_2:69587527-69587546 Msa0420820:intron 55.0%
TGGCAGTACAGGTCTGGCAA+AGG - chr3_2:69588114-69588133 Msa0420820:CDS 55.0%
GGTACCGCTGTCAAAAGGGT+AGG + chr3_2:69588840-69588859 None:intergenic 55.0%
GTCGGCGCTTGTATGCAATC+TGG + chr3_2:69589224-69589243 None:intergenic 55.0%
!! GATTGCATACAAGCGCCGAC+TGG - chr3_2:69589224-69589243 Msa0420820:intron 55.0%
AAGGAAGCTGGCTAGGAGCT+TGG - chr3_2:69589256-69589275 Msa0420820:intron 55.0%
AGGAAGCTGGCTAGGAGCTT+GGG - chr3_2:69589257-69589276 Msa0420820:intron 55.0%
AGCTTGGGGAGTGGAGAAGT+TGG - chr3_2:69589272-69589291 Msa0420820:intron 55.0%
!! GGGAGTGGAGAAGTTGGTGT+GGG - chr3_2:69589278-69589297 Msa0420820:intron 55.0%
! TGTGGCGGAGCTCCTTTATC+CGG - chr3_2:69589360-69589379 Msa0420820:intron 55.0%
AAAGAGAGGGGGAGAGAGAG+AGG - chr3_2:69589560-69589579 Msa0420820:intron 55.0%
GGCCTCGCGTGTGAAATTAC+AGG + chr3_2:69589744-69589763 None:intergenic 55.0%
GTAATTTCACACGCGAGGCC+AGG - chr3_2:69589744-69589763 Msa0420820:intron 55.0%
CCACAAAGCTCTTGCAGGAG+AGG + chr3_2:69589939-69589958 None:intergenic 55.0%
CCTCTCCTGCAAGAGCTTTG+TGG - chr3_2:69589936-69589955 Msa0420820:intron 55.0%
!! TAGTGTGTTGGGTTGAGGGG+TGG - chr3_2:69590178-69590197 Msa0420820:intron 55.0%
!! GTTTTAGTCGCACACCGCCT+AGG - chr3_2:69590200-69590219 Msa0420820:intron 55.0%
TATGTCGACAGGGCTCCCAT+TGG - chr3_2:69590876-69590895 Msa0420820:CDS 55.0%
ATGTCGACAGGGCTCCCATT+GGG - chr3_2:69590877-69590896 Msa0420820:CDS 55.0%
GCTCCCATTGGGCAAGGATA+TGG - chr3_2:69590888-69590907 Msa0420820:CDS 55.0%
GGCAGCCCCAGCAAATGTTT+CGG + chr3_2:69590919-69590938 None:intergenic 55.0%
GTAGTCATCCGCCTCAGAGA+AGG + chr3_2:69590940-69590959 None:intergenic 55.0%
TGAGGCGGATGACTACAGTG+TGG - chr3_2:69590944-69590963 Msa0420820:CDS 55.0%
GAGGCGGATGACTACAGTGT+GGG - chr3_2:69590945-69590964 Msa0420820:CDS 55.0%
AGGCGGATGACTACAGTGTG+GGG - chr3_2:69590946-69590965 Msa0420820:CDS 55.0%
TCGGACAAACCAATGCCACG+AGG - chr3_2:69591319-69591338 Msa0420820:intron 55.0%
CAAACCAATGCCACGAGGAG+AGG - chr3_2:69591324-69591343 Msa0420820:intron 55.0%
ACAACCTCTCCTCGTGGCAT+TGG + chr3_2:69591331-69591350 None:intergenic 55.0%
CCAACTACAACCTCTCCTCG+TGG + chr3_2:69591337-69591356 None:intergenic 55.0%
CCACGAGGAGAGGTTGTAGT+TGG - chr3_2:69591334-69591353 Msa0420820:intron 55.0%
CGAGGAGAGGTTGTAGTTGG+CGG - chr3_2:69591337-69591356 Msa0420820:intron 55.0%
! TTTCGAGGCACCCATCAGGA+TGG + chr3_2:69591590-69591609 None:intergenic 55.0%
! CGCCGACTGGCTGCTGTAAA+AGG - chr3_2:69589237-69589256 Msa0420820:intron 60.0%
GGAAGCTGGCTAGGAGCTTG+GGG - chr3_2:69589258-69589277 Msa0420820:intron 60.0%
!! GGGGAGTGGAGAAGTTGGTG+TGG - chr3_2:69589277-69589296 Msa0420820:intron 60.0%
AGAGGGGGAGAGAGAGAGGA+CGG - chr3_2:69589564-69589583 Msa0420820:intron 60.0%
GACTACAGTGTGGGGCGTGT+TGG - chr3_2:69590954-69590973 Msa0420820:CDS 60.0%
GGCGGTTTCAGTGTGACAGC+TGG - chr3_2:69591355-69591374 Msa0420820:intron 60.0%
CTGGCTAGGAGCTTGGGGAG+TGG - chr3_2:69589263-69589282 Msa0420820:intron 65.0%
GCTCAAAGGACCCAGAGCGC+CGG + chr3_2:69589716-69589735 None:intergenic 65.0%
GACAGGGCTCCCATTGGGCA+AGG - chr3_2:69590882-69590901 Msa0420820:CDS 65.0%
TGCTGGGGCTGCCTTCTCTG+AGG - chr3_2:69590926-69590945 Msa0420820:CDS 65.0%
! TGGGGCTGCCTTCTCTGAGG+CGG - chr3_2:69590929-69590948 Msa0420820:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 69586442 69593329 69586442 ID=Msa0420820;Name=Msa0420820
chr3_2 mRNA 69586442 69593329 69586442 ID=Msa0420820-mRNA-1;Parent=Msa0420820;Name=Msa0420820-mRNA-1;_AED=0.04;_eAED=0.04;_QI=239|1|1|1|0.90|0.83|12|261|727
chr3_2 exon 69586442 69586867 69586442 ID=Msa0420820-mRNA-1:exon:16597;Parent=Msa0420820-mRNA-1
chr3_2 exon 69587784 69587990 69587784 ID=Msa0420820-mRNA-1:exon:16596;Parent=Msa0420820-mRNA-1
chr3_2 exon 69588100 69588234 69588100 ID=Msa0420820-mRNA-1:exon:16595;Parent=Msa0420820-mRNA-1
chr3_2 exon 69588354 69588485 69588354 ID=Msa0420820-mRNA-1:exon:16594;Parent=Msa0420820-mRNA-1
chr3_2 exon 69588767 69588884 69588767 ID=Msa0420820-mRNA-1:exon:16593;Parent=Msa0420820-mRNA-1
chr3_2 exon 69590356 69590585 69590356 ID=Msa0420820-mRNA-1:exon:16592;Parent=Msa0420820-mRNA-1
chr3_2 exon 69590872 69591045 69590872 ID=Msa0420820-mRNA-1:exon:16591;Parent=Msa0420820-mRNA-1
chr3_2 exon 69591120 69591251 69591120 ID=Msa0420820-mRNA-1:exon:16590;Parent=Msa0420820-mRNA-1
chr3_2 exon 69591636 69591908 69591636 ID=Msa0420820-mRNA-1:exon:16589;Parent=Msa0420820-mRNA-1
chr3_2 exon 69592032 69592112 69592032 ID=Msa0420820-mRNA-1:exon:16588;Parent=Msa0420820-mRNA-1
chr3_2 exon 69592223 69592817 69592223 ID=Msa0420820-mRNA-1:exon:16587;Parent=Msa0420820-mRNA-1
chr3_2 exon 69593149 69593329 69593149 ID=Msa0420820-mRNA-1:exon:16586;Parent=Msa0420820-mRNA-1
chr3_2 five_prime_UTR 69593149 69593329 69593149 ID=Msa0420820-mRNA-1:five_prime_utr;Parent=Msa0420820-mRNA-1
chr3_2 five_prime_UTR 69592760 69592817 69592760 ID=Msa0420820-mRNA-1:five_prime_utr;Parent=Msa0420820-mRNA-1
chr3_2 CDS 69592223 69592759 69592223 ID=Msa0420820-mRNA-1:cds;Parent=Msa0420820-mRNA-1
chr3_2 CDS 69592032 69592112 69592032 ID=Msa0420820-mRNA-1:cds;Parent=Msa0420820-mRNA-1
chr3_2 CDS 69591636 69591908 69591636 ID=Msa0420820-mRNA-1:cds;Parent=Msa0420820-mRNA-1
chr3_2 CDS 69591120 69591251 69591120 ID=Msa0420820-mRNA-1:cds;Parent=Msa0420820-mRNA-1
chr3_2 CDS 69590872 69591045 69590872 ID=Msa0420820-mRNA-1:cds;Parent=Msa0420820-mRNA-1
chr3_2 CDS 69590356 69590585 69590356 ID=Msa0420820-mRNA-1:cds;Parent=Msa0420820-mRNA-1
chr3_2 CDS 69588767 69588884 69588767 ID=Msa0420820-mRNA-1:cds;Parent=Msa0420820-mRNA-1
chr3_2 CDS 69588354 69588485 69588354 ID=Msa0420820-mRNA-1:cds;Parent=Msa0420820-mRNA-1
chr3_2 CDS 69588100 69588234 69588100 ID=Msa0420820-mRNA-1:cds;Parent=Msa0420820-mRNA-1
chr3_2 CDS 69587784 69587990 69587784 ID=Msa0420820-mRNA-1:cds;Parent=Msa0420820-mRNA-1
chr3_2 CDS 69586703 69586867 69586703 ID=Msa0420820-mRNA-1:cds;Parent=Msa0420820-mRNA-1
chr3_2 three_prime_UTR 69586442 69586702 69586442 ID=Msa0420820-mRNA-1:three_prime_utr;Parent=Msa0420820-mRNA-1
Gene Sequence

>Msa0420820

ATGGTTGATCCAAACGGTAGTTCCTCATGGTTGAAAAATTTGAATATCTGTGAAACATTTGGGTTGAAAGATCATGGAGAACTTGGATTTGTGTTTGCTATAGTCATAGGCATCATTGTTCCTGTCTTGTTTTCGGTTTTTTTCTTAGGAAAGAAGAAAGGTAAAGTACGTGGTGTTCCGGTGGAAGTTAGTGGTGAATCGGGTTATGCTGTTCGTAATGCTCGATATTCTGAGTTGGTTGAAGTTCCTTGGAAAGGAGCTCCAACCATGGCTCATTTATTTGAGCAATCATGTAAAAAGCATACACATAATAGATTTCTTGGAACAAGGAAACTAATAGGGAAGGAGTTTGTTACATCTAGTGATGGCAGGAAATTTGAGAAAGTCCACTTAGGAGAATATGAATGGGAAACCTATGGAGAGGTCTTTGCTCGCGTGTCCAATTTTGCATCCGGTCTTCTTAAGCTAGGCCATGATATAGATAGTCATGTTGCGATTTTTTCTGATACTCGGGCTGAGTGGTTCATTGCCCTCCAGGGTTGCTTCCGGCAGAATATAACGGTCGTCACTATTTATGCTTCTCTAGGTGAGGATGCTCTGATTCACTCACTGAACGAGACCCAAGTATCTACTCTGATCTGTGACGTAAAGCTGCTGAATAAACTGGACGCAATAAGATCAAAACTAACATCTTTGCAAAATATAATTTACTTTGAAGACGATAGCAAAGAGGAACATGCTTTTTCAGAAGGTTTGAGCAGCAACTGTACAATTGCATCTTTTGATGAAGTTGAGAAACTTGGGAAAGAAAGTCCCGTCGAACCAAGCTTACCTTCCAAGAATGCTGTTGCAGTTGTCATGTATACAAGTGGCAGTACAGGTCTGGCAAAGGGTGTCATGATTACTCACGGGAACATTGTAGCCACCACAGCAGCTGTTATGACTGTGGTTCCAAATCTAGGTAGCAAGGACGTGTACTTGGCGTACTTACCCCTTGCTCATGTTTTTGAAATGGCAGCAGAGTCTGTTATGCTTGCTGCAGGTGTTGCAATTGGTTACGGCAGTCCTATGACTTTGACCGATACGTCTAATAAAGTCAAGAAAGGAACCAAAGGAGATGTTACTGTTTTAAAACCTACCCTTTTGACAGCGGTACCAGCTATTATTGATCGTATTCGAGATGGAGTTGTAAAAAAGGTGGAGGAAAAAGGGGGACTTGCCAAGAATCTTTTCCAGATTGCATACAAGCGCCGACTGGCTGCTGTAAAAGGAAGCTGGCTAGGAGCTTGGGGAGTGGAGAAGTTGGTGTGGGATACCATTATCTTTAAAAAAATCCGTACTGTACTTGGAGGCAACCTCCGATTTATGCTTTGTGGCGGAGCTCCTTTATCCGGAGATTCACAACAATTCATCAATATCTGTGTGGGGGCTCCCATTGGGCAAGGATATGGTTTGACCGAAACATTTGCTGGGGCTGCCTTCTCTGAGGCGGATGACTACAGTGTGGGGCGTGTTGGTCCACCTCTGCCTTGTTGCTACATTAAGCTTGTTTCTTGGGAAGAAGGAGGGTATCTATCATCGGACAAACCAATGCCACGAGGAGAGGTTGTAGTTGGCGGTTTCAGTGTGACAGCTGGTTATTTTAAGAATCAAGATAAAACTGATGAAGCGTTCAAGGTTGATGAGAAAGGTGTGCGCTGGTTTTATACTGGTGACATTGGGCGATTCCATCCTGATGGGTGCCTCGAAATCATCGATAGGAAGAAGGATATTGTCAAACTTCAACATGGAGAATATATCTCTCTTGGAAAGGTTGAGGCAGCACTCGCGTCATGTGATTATGTGGATAGTATAATGGTGCATGCAGACCCCTTTCACAGTTACTGTGTTGCTCTAGCTGTTGCTTCACGTCAGTCTCTGGAAAAGTGGGCCCAAGAAACTGGTATCGAATACAAAGATTTTCCTGATCTCTGTAACAAACCTGAAGCTGTCACTGAGGTTCTGCAGTCCATTTCCAAGGCTGCAAAAGCTGCAAAGCTGCAAAAAACTGAAGTTCCTGCAAAGATTAAGCTGTTGGCGGATCCATGGACACCTGAATCTGGATTAGTTACTGCTGCTCTCAAGATAAAGAGAGAACAGCTGAAAGCCAAATTCAATGATGATCTTCAGAAGTTGTATGCATGA
Protein sequence

>Msa0420820

MVDPNGSSSWLKNLNICETFGLKDHGELGFVFAIVIGIIVPVLFSVFFLGKKKGKVRGVPVEVSGESGYAVRNARYSELVEVPWKGAPTMAHLFEQSCKKHTHNRFLGTRKLIGKEFVTSSDGRKFEKVHLGEYEWETYGEVFARVSNFASGLLKLGHDIDSHVAIFSDTRAEWFIALQGCFRQNITVVTIYASLGEDALIHSLNETQVSTLICDVKLLNKLDAIRSKLTSLQNIIYFEDDSKEEHAFSEGLSSNCTIASFDEVEKLGKESPVEPSLPSKNAVAVVMYTSGSTGLAKGVMITHGNIVATTAAVMTVVPNLGSKDVYLAYLPLAHVFEMAAESVMLAAGVAIGYGSPMTLTDTSNKVKKGTKGDVTVLKPTLLTAVPAIIDRIRDGVVKKVEEKGGLAKNLFQIAYKRRLAAVKGSWLGAWGVEKLVWDTIIFKKIRTVLGGNLRFMLCGGAPLSGDSQQFINICVGAPIGQGYGLTETFAGAAFSEADDYSVGRVGPPLPCCYIKLVSWEEGGYLSSDKPMPRGEVVVGGFSVTAGYFKNQDKTDEAFKVDEKGVRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALASCDYVDSIMVHADPFHSYCVALAVASRQSLEKWAQETGIEYKDFPDLCNKPEAVTEVLQSISKAAKAAKLQKTEVPAKIKLLADPWTPESGLVTAALKIKREQLKAKFNDDLQKLYA*