AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0805420


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0805420 MtrunA17_Chr5g0413351 97.256 328 9 0 1 328 1 328 0.0 657
Msa0805420 MtrunA17_Chr8g0368491 62.651 332 118 2 1 328 16 345 9.20e-151 427
Msa0805420 MtrunA17_Chr8g0368481 60.909 330 121 3 4 328 34 360 6.49e-145 413
Msa0805420 MtrunA17_Chr4g0058951 50.298 336 158 4 1 328 16 350 1.69e-116 340
Msa0805420 MtrunA17_Chr3g0117481 51.906 341 147 4 1 328 16 352 2.83e-113 332
Msa0805420 MtrunA17_Chr7g0228251 50.311 322 148 5 4 325 8 317 1.43e-108 319
Msa0805420 MtrunA17_Chr1g0194161 40.498 321 175 5 12 320 5 321 5.14e-74 231
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0805420 AT1G70505.3 59.077 325 127 4 1 321 1 323 6.56e-134 384
Msa0805420 AT1G70505.4 59.077 325 127 4 1 321 27 349 8.33e-134 385
Msa0805420 AT1G10660.2 56.308 325 126 5 1 318 1 316 2.49e-120 349
Msa0805420 AT1G10660.1 56.308 325 126 5 1 318 1 316 2.49e-120 349
Msa0805420 AT1G10660.3 56.308 325 126 5 1 318 1 316 2.49e-120 349
Msa0805420 AT1G10660.4 56.308 325 126 5 1 318 1 316 2.49e-120 349
Msa0805420 AT5G62960.1 47.432 331 161 3 2 328 26 347 2.22e-108 320
Msa0805420 AT5G62960.2 46.075 293 145 3 2 290 26 309 5.78e-92 276
Msa0805420 AT1G70505.2 53.441 247 109 4 1 243 1 245 1.09e-83 254
Msa0805420 AT1G70505.1 53.414 249 110 4 1 245 27 273 2.24e-82 254
Msa0805420 AT3G27770.1 41.066 319 166 7 7 317 11 315 2.85e-81 249
Msa0805420 AT3G27770.2 43.678 261 130 6 65 317 21 272 1.46e-69 218
Msa0805420 AT2G47115.1 39.863 291 144 4 43 323 28 297 8.02e-59 191

Find 82 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATACTAATACCTTGAGTTAT+TGG 0.142821 5_3:-22063671 Msa0805420:CDS
TATTATTCAAATATTATTTC+AGG 0.227394 5_3:-22062474 Msa0805420:intron
TTAAAGGAATTCATCCTAAT+TGG 0.227419 5_3:-22063476 Msa0805420:CDS
TGCTCACTGACCTTGTATTC+TGG 0.268288 5_3:-22060838 Msa0805420:CDS
CCTTGAGTTATTGGTTGAAT+TGG 0.289568 5_3:-22063662 Msa0805420:CDS
TAATTTCAACATGAATTAAC+AGG 0.326573 5_3:-22063738 Msa0805420:five_prime_UTR
AATATCCAGACGGAAGTCTT+TGG 0.329675 5_3:+22060790 None:intergenic
GAGACAGAGAGAAGATGCTT+TGG 0.343236 5_3:+22064357 None:intergenic
GCATGGAATACATGTGTTAA+AGG 0.347362 5_3:-22063492 Msa0805420:CDS
ATAATGCACATTCCATGTTA+TGG 0.360858 5_3:-22059117 Msa0805420:CDS
TTCGAAACTCCAACAACTAT+TGG 0.360922 5_3:+22058970 None:intergenic
CTGTAAGCAAGCAACCAATT+AGG 0.371298 5_3:+22063462 None:intergenic
CATCACCATATGCACCCTTA+TGG 0.375914 5_3:-22059625 Msa0805420:intron
GTTAAAGCAACTTCTATAGA+AGG 0.385635 5_3:+22062649 None:intergenic
CAGGATTCTCAAGCCAAACT+TGG 0.399849 5_3:-22063719 Msa0805420:five_prime_UTR
TTAAATATGTAGACTTGTGC+AGG 0.402756 5_3:-22060869 Msa0805420:intron
TAGAACTTAGAAGCCAAGTT+TGG 0.406459 5_3:+22063706 None:intergenic
CTGGTTCTTGTCAGTTTCTA+CGG 0.409172 5_3:-22059041 Msa0805420:CDS
TTTGGTCACTATTTACTTTG+CGG 0.416580 5_3:-22062912 Msa0805420:intron
TCCATGCCGTTGTTTCGCTT+TGG 0.416933 5_3:-22059755 Msa0805420:intron
TATGTGGCTCCAACTCTTGA+TGG 0.421734 5_3:-22062581 Msa0805420:CDS
TAAGAGTTCGTATGCCAATC+AGG 0.423869 5_3:-22062534 Msa0805420:CDS
AGACAGAGAGAAGATGCTTT+GGG 0.434369 5_3:+22064358 None:intergenic
AGCATTAGTCATTCTGTGTA+AGG 0.441761 5_3:-22059002 Msa0805420:three_prime_UTR
AGTGAAATTAAGATTTAAGA+AGG 0.443913 5_3:+22064318 None:intergenic
GAACAGATGGACATTTACTT+TGG 0.448713 5_3:-22062930 Msa0805420:intron
CTTTAACCACAAGGAATTTG+AGG 0.453242 5_3:-22062633 Msa0805420:CDS
AGAGAATGAGTATATCAGTA+TGG 0.453565 5_3:+22058771 None:intergenic
ACTGCTAATATAGTTGTTGA+TGG 0.456333 5_3:-22063405 Msa0805420:CDS
ACATACCATAAGGGTGCATA+TGG 0.457897 5_3:+22059620 None:intergenic
GACAAATCAAGGAAAGGATA+AGG 0.477562 5_3:+22059647 None:intergenic
GTTAACGCTGTGCTCCTCCT+TGG 0.480961 5_3:-22059955 Msa0805420:CDS
TGGTTGTCGAGATTGTTCTC+TGG 0.487176 5_3:-22059060 Msa0805420:CDS
TTTAACCACAAGGAATTTGA+GGG 0.490528 5_3:-22062632 Msa0805420:CDS
TCGATTGAGAGATTCCTGAT+TGG 0.495840 5_3:+22062520 None:intergenic
TCGAAATACAGCTGGTGTGT+GGG 0.497509 5_3:-22062501 Msa0805420:CDS
GGAAGAAGGGCGACGAGAAA+CGG 0.502040 5_3:-22063538 Msa0805420:CDS
AAGTCTTTGGATGTCATAAA+CGG 0.506515 5_3:+22060803 None:intergenic
CATATGGTGATGACAAATCA+AGG 0.512911 5_3:+22059636 None:intergenic
GACATCCAAAGACTTCCGTC+TGG 0.516324 5_3:-22060795 Msa0805420:CDS
GTAGGGAAAATTTATTACAA+AGG 0.518574 5_3:+22058888 None:intergenic
ATGTGGCTCCAACTCTTGAT+GGG 0.523828 5_3:-22062580 Msa0805420:CDS
GAAATGAGAGGGTGGAAGAA+GGG 0.524860 5_3:-22063551 Msa0805420:CDS
TTGTTGGAGTTTCGAAACCT+TGG 0.526050 5_3:-22058963 Msa0805420:three_prime_UTR
AAATAACAAGCCAGAATACA+AGG 0.530867 5_3:+22060828 None:intergenic
AGAAATGAGAGGGTGGAAGA+AGG 0.535700 5_3:-22063552 Msa0805420:CDS
TTCAATTTGCAGTTCACCGT+TGG 0.536989 5_3:-22059988 Msa0805420:intron
AAATATGCAAATCGAAACAC+TGG 0.545569 5_3:+22059819 None:intergenic
ATCGAAATACAGCTGGTGTG+TGG 0.547035 5_3:-22062502 Msa0805420:CDS
AGCTTGTTAATGTTAAGTGA+AGG 0.558355 5_3:-22058836 Msa0805420:three_prime_UTR
GCATTAGTCATTCTGTGTAA+GGG 0.560859 5_3:-22059001 Msa0805420:three_prime_UTR
TCTCTCAATCGAAATACAGC+TGG 0.561952 5_3:-22062509 Msa0805420:CDS
GAAGGGCGACGAGAAACGGT+TGG 0.569856 5_3:-22063534 Msa0805420:CDS
TCAGAAATCCCATCAAGAGT+TGG 0.569985 5_3:+22062572 None:intergenic
CATTAGTCATTCTGTGTAAG+GGG 0.570552 5_3:-22059000 Msa0805420:three_prime_UTR
AATATAGTTGTTGATGGAGG+TGG 0.572071 5_3:-22063399 Msa0805420:CDS
TGCTATATGAAGATGAAGCA+TGG 0.572936 5_3:-22063509 Msa0805420:CDS
ATGAGTATATCAGTATGGAC+AGG 0.574521 5_3:+22058776 None:intergenic
CGTTTCCCTCAAATTCCTTG+TGG 0.579761 5_3:+22062627 None:intergenic
AATTTAAGAACATACCATAA+GGG 0.580153 5_3:+22059611 None:intergenic
CCAATTCAACCAATAACTCA+AGG 0.587774 5_3:+22063662 None:intergenic
TACGAACTCTTAGATAAGAC+AGG 0.588267 5_3:+22062545 None:intergenic
GGTATTAGTATCTTGTGTCA+TGG 0.591072 5_3:+22063683 None:intergenic
CGAAATACAGCTGGTGTGTG+GGG 0.596310 5_3:-22062500 Msa0805420:CDS
GGTGATGACAAATCAAGGAA+AGG 0.602090 5_3:+22059641 None:intergenic
TAGTGAAGTTGAAGCACTTG+TGG 0.603098 5_3:-22059080 Msa0805420:CDS
TACAGAACGAGGCACTTATG+TGG 0.604278 5_3:-22062597 Msa0805420:CDS
TCAGTAAATCAAGAAATGAG+AGG 0.605968 5_3:-22063563 Msa0805420:CDS
CAGTAAATCAAGAAATGAGA+GGG 0.619640 5_3:-22063562 Msa0805420:CDS
AATGCAAAGAAGCCATAACA+TGG 0.621242 5_3:+22059105 None:intergenic
TAGAAGTTGCTTTAACCACA+AGG 0.639755 5_3:-22062642 Msa0805420:CDS
TAAATCAAGAAATGAGAGGG+TGG 0.641595 5_3:-22063559 Msa0805420:CDS
ACCAAAGCGAAACAACGGCA+TGG 0.646417 5_3:+22059754 None:intergenic
AGTATATCAGTATGGACAGG+AGG 0.646590 5_3:+22058779 None:intergenic
ACACAGAATGACTAATGCTG+TGG 0.647354 5_3:+22059006 None:intergenic
CGAAACATCATTGAACTGCA+TGG 0.659943 5_3:-22059932 Msa0805420:intron
AGTTCAATGATGTTTCGCCA+AGG 0.672652 5_3:+22059938 None:intergenic
TCAATGATGTTTCGCCAAGG+AGG 0.685866 5_3:+22059941 None:intergenic
GCTAATATAGTTGTTGATGG+AGG 0.698631 5_3:-22063402 Msa0805420:CDS
GTTAACAGAGTGCATACCAA+CGG 0.699109 5_3:+22059972 None:intergenic
TTGTACTTACAATATCCAGA+CGG 0.715608 5_3:+22060780 None:intergenic
AACGCATTAGATACAGAACG+AGG 0.781639 5_3:-22062608 Msa0805420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTCTTTTATTAACTA+TGG - chr5_3:22059550-22059569 Msa0805420:intron 10.0%
!!! ATATTTCTTTTATTAACTAT+GGG - chr5_3:22059551-22059570 Msa0805420:intron 10.0%
!! TATTATTCAAATATTATTTC+AGG - chr5_3:22060698-22060717 Msa0805420:intron 10.0%
!!! TCTAATTTTATAAAAAAATG+TGG + chr5_3:22061649-22061668 None:intergenic 10.0%
!!! AAATTTAAAGTATATAATTG+AGG + chr5_3:22063300-22063319 None:intergenic 10.0%
!!! ATATATTTTTTTTTAGACAT+TGG - chr5_3:22064232-22064251 Msa0805420:intron 10.0%
!! TAAAGAGAATTTAATTCAAA+GGG + chr5_3:22059131-22059150 None:intergenic 15.0%
!! ATAAAGAGAATTTAATTCAA+AGG + chr5_3:22059132-22059151 None:intergenic 15.0%
!! TGAATTAAATTCTCTTTATT+TGG - chr5_3:22059133-22059152 Msa0805420:CDS 15.0%
!!! ATTACTCTTATTGATTTTAT+TGG - chr5_3:22060724-22060743 Msa0805420:intron 15.0%
!!! TTTCTTCTTTTCTTTAATTT+GGG + chr5_3:22060958-22060977 None:intergenic 15.0%
!!! ATTTCTTCTTTTCTTTAATT+TGG + chr5_3:22060959-22060978 None:intergenic 15.0%
!!! AATTGTTTTATTGATTGAAA+AGG - chr5_3:22060976-22060995 Msa0805420:intron 15.0%
!!! AATTTTCAATTAGAACTTAA+AGG + chr5_3:22061084-22061103 None:intergenic 15.0%
!! TATATAATATAACACCTTAA+AGG - chr5_3:22061369-22061388 Msa0805420:intron 15.0%
!!! AAGCATATTATTTTTAAATC+TGG - chr5_3:22062066-22062085 Msa0805420:intron 15.0%
!!! AGCATATTATTTTTAAATCT+GGG - chr5_3:22062067-22062086 Msa0805420:intron 15.0%
!!! AATTTTATTGTGTTATTAAC+TGG - chr5_3:22062239-22062258 Msa0805420:intron 15.0%
!! AAATATATGTCAAATATTAG+AGG + chr5_3:22063635-22063654 None:intergenic 15.0%
!! ATATTTGACATATATTTCAA+CGG - chr5_3:22063638-22063657 Msa0805420:CDS 15.0%
!!! TCATTTTTAAAAAATCTAAC+TGG + chr5_3:22063866-22063885 None:intergenic 15.0%
!! TCTAAAAAAAAATATATCCA+AGG + chr5_3:22064229-22064248 None:intergenic 15.0%
!!! TTTTCTATAAAAAATGAGTA+GGG + chr5_3:22064304-22064323 None:intergenic 15.0%
!!! TTTTTCTATAAAAAATGAGT+AGG + chr5_3:22064305-22064324 None:intergenic 15.0%
!! AGTGAAATTAAGATTTAAGA+AGG + chr5_3:22058857-22058876 None:intergenic 20.0%
!!! ACAGAATTTTGCAAAAATTA+AGG + chr5_3:22059033-22059052 None:intergenic 20.0%
!!! TGCTTAATCAATTGATAATT+TGG - chr5_3:22059101-22059120 Msa0805420:CDS 20.0%
!!! GCTTAATCAATTGATAATTT+GGG - chr5_3:22059102-22059121 Msa0805420:CDS 20.0%
!!! CTTAATCAATTGATAATTTG+GGG - chr5_3:22059103-22059122 Msa0805420:CDS 20.0%
!! TTGATAAATATAGGCATATT+TGG + chr5_3:22059394-22059413 None:intergenic 20.0%
!!! ATACTTGGTTTGATAAATAT+AGG + chr5_3:22059403-22059422 None:intergenic 20.0%
!! ATTAATAAGTTGCTAATACT+TGG + chr5_3:22059418-22059437 None:intergenic 20.0%
!! TAATTTCAACATGAATTAAC+AGG - chr5_3:22059434-22059453 Msa0805420:intron 20.0%
!!! AATTTCTTTTTTTGTGCTTT+TGG - chr5_3:22059736-22059755 Msa0805420:intron 20.0%
!!! ATTTCTTTTTTTGTGCTTTT+GGG - chr5_3:22059737-22059756 Msa0805420:intron 20.0%
!! ATGATATCAATTTCAAAATG+CGG - chr5_3:22059949-22059968 Msa0805420:CDS 20.0%
!! TAACCAATGAAATTGTTTAT+TGG + chr5_3:22060112-22060131 None:intergenic 20.0%
!! CAGCATATTTATAACAAAAA+GGG + chr5_3:22060198-22060217 None:intergenic 20.0%
!! TCAGCATATTTATAACAAAA+AGG + chr5_3:22060199-22060218 None:intergenic 20.0%
!!! TTCAAGTATAACTTTTGTTT+AGG - chr5_3:22060829-22060848 Msa0805420:CDS 20.0%
!!! ATTAGTTTTGTGAAAGAAAT+TGG - chr5_3:22060885-22060904 Msa0805420:intron 20.0%
!! AAATTGGATATAATTGAAGA+TGG - chr5_3:22060901-22060920 Msa0805420:intron 20.0%
!! CTAACAAAAGATATTTAGAT+TGG - chr5_3:22061234-22061253 Msa0805420:intron 20.0%
!! TTAGATTGGAGAAAAAAAAA+TGG - chr5_3:22061248-22061267 Msa0805420:intron 20.0%
!! TAGATTGGAGAAAAAAAAAT+GGG - chr5_3:22061249-22061268 Msa0805420:intron 20.0%
!! AATAGTATTTGATCAAATCA+TGG - chr5_3:22061687-22061706 Msa0805420:intron 20.0%
!! TATGTGCATACATTTAATTA+GGG + chr5_3:22062577-22062596 None:intergenic 20.0%
!!! TGATTTTGTGAAATTGATTA+TGG - chr5_3:22062662-22062681 Msa0805420:CDS 20.0%
!!! AGAATTGATTTTAACATGTT+TGG + chr5_3:22062831-22062850 None:intergenic 20.0%
!! CATTAATTACAAATTTCATG+CGG + chr5_3:22063005-22063024 None:intergenic 20.0%
!!! TCATTAACTTTTCATCATTA+AGG + chr5_3:22063048-22063067 None:intergenic 20.0%
!! AATTTAAGAACATACCATAA+GGG + chr5_3:22063564-22063583 None:intergenic 20.0%
!!! TATATTATCTATTGCTGATT+CGG - chr5_3:22063796-22063815 Msa0805420:intron 20.0%
! TTGATGAATATGAAAAACAG+AGG + chr5_3:22058903-22058922 None:intergenic 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr5_3:22059176-22059195 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr5_3:22059177-22059196 None:intergenic 25.0%
! AAATATAGGCATATTTGGAT+TGG + chr5_3:22059389-22059408 None:intergenic 25.0%
! ATACTAATACCTTGAGTTAT+TGG - chr5_3:22059501-22059520 Msa0805420:intron 25.0%
! TTAAAGGAATTCATCCTAAT+TGG - chr5_3:22059696-22059715 Msa0805420:intron 25.0%
! AAGACAGCAATATATTATAC+AGG + chr5_3:22059838-22059857 None:intergenic 25.0%
!!! TTGCGTTTTTTTCATCTTTT+TGG - chr5_3:22060323-22060342 Msa0805420:intron 25.0%
!!! TGCGTTTTTTTCATCTTTTT+GGG - chr5_3:22060324-22060343 Msa0805420:intron 25.0%
! AAAGGAGATATGTTATAGAA+AGG - chr5_3:22060994-22061013 Msa0805420:intron 25.0%
! TCAATTAGAACTTAAAGGTT+TGG + chr5_3:22061079-22061098 None:intergenic 25.0%
!! AATATCTTTTGTTAGAAACC+TGG + chr5_3:22061229-22061248 None:intergenic 25.0%
!! TTTTACTCTGTTTGAAAGAA+TGG - chr5_3:22061341-22061360 Msa0805420:intron 25.0%
! TTTACTCTGTTTGAAAGAAT+GGG - chr5_3:22061342-22061361 Msa0805420:intron 25.0%
! AATTACTTGTATACTCTCAT+TGG - chr5_3:22061544-22061563 Msa0805420:intron 25.0%
! AAAAAGAAATTCAACAAAGC+TGG + chr5_3:22061577-22061596 None:intergenic 25.0%
! GGTCTTTATTACAAACAAAA+GGG + chr5_3:22061628-22061647 None:intergenic 25.0%
! TGGTCTTTATTACAAACAAA+AGG + chr5_3:22061629-22061648 None:intergenic 25.0%
!!! AATAACGGGTTGTTAAAATT+AGG + chr5_3:22061766-22061785 None:intergenic 25.0%
! TCTTTGCCAAGAAATTTAAT+TGG - chr5_3:22061964-22061983 Msa0805420:intron 25.0%
! TTCTGACCAATTAAATTTCT+TGG + chr5_3:22061973-22061992 None:intergenic 25.0%
! TGTTATTAACTGGTTAAACT+TGG - chr5_3:22062249-22062268 Msa0805420:intron 25.0%
! GTTATTAACTGGTTAAACTT+GGG - chr5_3:22062250-22062269 Msa0805420:intron 25.0%
!!! TACTGATTAGATAAAGCTTT+TGG - chr5_3:22062471-22062490 Msa0805420:intron 25.0%
!! ACTGATTAGATAAAGCTTTT+GGG - chr5_3:22062472-22062491 Msa0805420:intron 25.0%
! CATACATTTAATTAGGGATT+AGG + chr5_3:22062571-22062590 None:intergenic 25.0%
! CTATGTGCATACATTTAATT+AGG + chr5_3:22062578-22062597 None:intergenic 25.0%
!! AATGTATGCACATAGTTTTT+AGG - chr5_3:22062583-22062602 Msa0805420:CDS 25.0%
!! ATGTATGCACATAGTTTTTA+GGG - chr5_3:22062584-22062603 Msa0805420:CDS 25.0%
! TTAGTAGTTTCATTCTTGTT+TGG - chr5_3:22062621-22062640 Msa0805420:CDS 25.0%
! AAACATACATGAAAACTGTT+TGG - chr5_3:22062894-22062913 Msa0805420:intron 25.0%
! CGCATGAAATTTGTAATTAA+TGG - chr5_3:22063003-22063022 Msa0805420:intron 25.0%
!!! TTCAGTTCTAAAAGAAATGT+CGG - chr5_3:22063116-22063135 Msa0805420:intron 25.0%
!! GATTTGCATATTTTATCTTG+TGG - chr5_3:22063363-22063382 Msa0805420:intron 25.0%
! AAAAGCAATAGAAAGAAGAT+GGG + chr5_3:22063456-22063475 None:intergenic 25.0%
!! ATTTTCTAACCTTTTGTTAC+AGG - chr5_3:22063499-22063518 Msa0805420:CDS 25.0%
! GAATTTAAGAACATACCATA+AGG + chr5_3:22063565-22063584 None:intergenic 25.0%
!!! ATTTGAGTATTGATGACTAA+TGG + chr5_3:22063587-22063606 None:intergenic 25.0%
!!! GTAATTTTTTTCCTTTTGCA+TGG + chr5_3:22063613-22063632 None:intergenic 25.0%
! TGGTAGTACATATTATGTTA+TGG - chr5_3:22063700-22063719 Msa0805420:exon 25.0%
! TACATATTATGTTATGGTCT+AGG - chr5_3:22063706-22063725 Msa0805420:five_prime_UTR 25.0%
!!! ATATTATCTATTGCTGATTC+GGG - chr5_3:22063797-22063816 Msa0805420:intron 25.0%
!!! TGTTCGAATTTTTTGGTATA+TGG + chr5_3:22063915-22063934 None:intergenic 25.0%
! GTAGGGAAAATTTATTACAA+AGG + chr5_3:22064287-22064306 None:intergenic 25.0%
CCAAATTGCTTACTTAAGAT+GGG + chr5_3:22058955-22058974 None:intergenic 30.0%
CCATCTTAAGTAAGCAATTT+GGG - chr5_3:22058953-22058972 Msa0805420:three_prime_UTR 30.0%
! CTTTTATTAACTATGGGCTT+AGG - chr5_3:22059557-22059576 Msa0805420:intron 30.0%
!! GCTTAGGATCATTTTTGATA+TGG - chr5_3:22059573-22059592 Msa0805420:intron 30.0%
TCAGTAAATCAAGAAATGAG+AGG - chr5_3:22059609-22059628 Msa0805420:intron 30.0%
CAGTAAATCAAGAAATGAGA+GGG - chr5_3:22059610-22059629 Msa0805420:intron 30.0%
ACTGCTAATATAGTTGTTGA+TGG - chr5_3:22059767-22059786 Msa0805420:CDS 30.0%
AGTAAGTAACTAAACTTCCA+AGG - chr5_3:22059908-22059927 Msa0805420:intron 30.0%
GCATACAAATTTATGAACCT+TGG + chr5_3:22059928-22059947 None:intergenic 30.0%
TATCAATTTCAAAATGCGGA+CGG - chr5_3:22059953-22059972 Msa0805420:CDS 30.0%
CAATGAAATTGTTTATTGGC+TGG + chr5_3:22060108-22060127 None:intergenic 30.0%
CAGCCAATAAACAATTTCAT+TGG - chr5_3:22060106-22060125 Msa0805420:intron 30.0%
TTTGGTCACTATTTACTTTG+CGG - chr5_3:22060260-22060279 Msa0805420:intron 30.0%
!!! GCGTTTTTTTCATCTTTTTG+GGG - chr5_3:22060325-22060344 Msa0805420:intron 30.0%
!!! CGTTTTTTTCATCTTTTTGG+GGG - chr5_3:22060326-22060345 Msa0805420:intron 30.0%
!!! GTTTTTTTCATCTTTTTGGG+GGG - chr5_3:22060327-22060346 Msa0805420:intron 30.0%
TATGTTCATATACTCCATAG+AGG - chr5_3:22060395-22060414 Msa0805420:intron 30.0%
GCTGAAATTGAAATTAAGAG+TGG + chr5_3:22060488-22060507 None:intergenic 30.0%
GTTAAAGCAACTTCTATAGA+AGG + chr5_3:22060526-22060545 None:intergenic 30.0%
TTTAACCACAAGGAATTTGA+GGG - chr5_3:22060540-22060559 Msa0805420:intron 30.0%
! TATCAGCTTTTATCTCTTTC+AGG + chr5_3:22060931-22060950 None:intergenic 30.0%
TGAAAGAGATAAAAGCTGAT+AGG - chr5_3:22060930-22060949 Msa0805420:intron 30.0%
AAAAGTTTGTCTGTTTGAGA+TGG - chr5_3:22061314-22061333 Msa0805420:intron 30.0%
AAAGCTAGTTGAAACCTTTA+AGG + chr5_3:22061386-22061405 None:intergenic 30.0%
!!! AGGTTTCAACTAGCTTTTTA+AGG - chr5_3:22061389-22061408 Msa0805420:intron 30.0%
TCAGTGACTCAAACTTATTA+AGG - chr5_3:22061516-22061535 Msa0805420:intron 30.0%
CAGTGACTCAAACTTATTAA+GGG - chr5_3:22061517-22061536 Msa0805420:intron 30.0%
! AAAGGGAAAGTACAACTAAA+AGG + chr5_3:22061611-22061630 None:intergenic 30.0%
ACAGTGCTATAACGTTATTA+CGG + chr5_3:22061833-22061852 None:intergenic 30.0%
AGATATCGGAAGAAAAAAAG+TGG + chr5_3:22061877-22061896 None:intergenic 30.0%
GTGTTGTAAATCACAGATAT+CGG + chr5_3:22061891-22061910 None:intergenic 30.0%
TATCTGTGATTTACAACACT+TGG - chr5_3:22061892-22061911 Msa0805420:intron 30.0%
ATTCTGCTATATGCTTAGAT+TGG - chr5_3:22061925-22061944 Msa0805420:intron 30.0%
TTAAATATGTAGACTTGTGC+AGG - chr5_3:22062303-22062322 Msa0805420:intron 30.0%
AAATAACAAGCCAGAATACA+AGG + chr5_3:22062347-22062366 None:intergenic 30.0%
AAGTCTTTGGATGTCATAAA+CGG + chr5_3:22062372-22062391 None:intergenic 30.0%
TTGTACTTACAATATCCAGA+CGG + chr5_3:22062395-22062414 None:intergenic 30.0%
TGTGATTTCTTCATTTGGTT+GGG - chr5_3:22062433-22062452 Msa0805420:intron 30.0%
! CTGATTAGATAAAGCTTTTG+GGG - chr5_3:22062473-22062492 Msa0805420:intron 30.0%
AGAATCAACAGAAAAAGAAG+AGG - chr5_3:22062536-22062555 Msa0805420:CDS 30.0%
!!! TTCATTCTTGTTTGGTTTTG+CGG - chr5_3:22062629-22062648 Msa0805420:CDS 30.0%
TGATTATGGCTAAAAGTGAT+TGG - chr5_3:22062676-22062695 Msa0805420:intron 30.0%
GCCTAAAAATCAAATTGTAG+AGG - chr5_3:22062758-22062777 Msa0805420:intron 30.0%
!! GCCTCTACAATTTGATTTTT+AGG + chr5_3:22062762-22062781 None:intergenic 30.0%
AAGTTAATGAAGATGCAGAA+AGG - chr5_3:22063058-22063077 Msa0805420:intron 30.0%
TGAGGAGAAATATAAGCAAA+AGG + chr5_3:22063282-22063301 None:intergenic 30.0%
AAATATGCAAATCGAAACAC+TGG + chr5_3:22063356-22063375 None:intergenic 30.0%
! TGCATATTTTATCTTGTGGA+CGG - chr5_3:22063367-22063386 Msa0805420:intron 30.0%
!! CTACATTTGTGATTTTTCAG+TGG - chr5_3:22063390-22063409 Msa0805420:CDS 30.0%
GAAAAGCAATAGAAAGAAGA+TGG + chr5_3:22063457-22063476 None:intergenic 30.0%
!! TCTTTCTATTGCTTTTCAGT+TGG - chr5_3:22063460-22063479 Msa0805420:CDS 30.0%
!!! CACATTGAAACTTTTTTGAC+TGG - chr5_3:22063680-22063699 Msa0805420:CDS 30.0%
TATGTTTGGATCAGTGATAT+AGG - chr5_3:22063820-22063839 Msa0805420:intron 30.0%
ATGTTTGGATCAGTGATATA+GGG - chr5_3:22063821-22063840 Msa0805420:intron 30.0%
!!! TCGAATTTTTTGGTATATGG+TGG + chr5_3:22063912-22063931 None:intergenic 30.0%
TTGAACTGATACAAGTTTGT+TGG - chr5_3:22063997-22064016 Msa0805420:intron 30.0%
ATAATGCACATTCCATGTTA+TGG - chr5_3:22064055-22064074 Msa0805420:intron 30.0%
!! AGCTTGTTAATGTTAAGTGA+AGG - chr5_3:22064336-22064355 Msa0805420:five_prime_UTR 30.0%
AGAGAATGAGTATATCAGTA+TGG + chr5_3:22064404-22064423 None:intergenic 30.0%
CCCATCTTAAGTAAGCAATT+TGG - chr5_3:22058952-22058971 Msa0805420:three_prime_UTR 35.0%
CCCAAATTGCTTACTTAAGA+TGG + chr5_3:22058956-22058975 None:intergenic 35.0%
AAGCAACTTCACAAAACACA+TGG + chr5_3:22059086-22059105 None:intergenic 35.0%
TAGAACTTAGAAGCCAAGTT+TGG + chr5_3:22059469-22059488 None:intergenic 35.0%
GGTATTAGTATCTTGTGTCA+TGG + chr5_3:22059492-22059511 None:intergenic 35.0%
CCAATTCAACCAATAACTCA+AGG + chr5_3:22059513-22059532 None:intergenic 35.0%
! CCTTGAGTTATTGGTTGAAT+TGG - chr5_3:22059510-22059529 Msa0805420:intron 35.0%
TAAATCAAGAAATGAGAGGG+TGG - chr5_3:22059613-22059632 Msa0805420:intron 35.0%
TGCTATATGAAGATGAAGCA+TGG - chr5_3:22059663-22059682 Msa0805420:intron 35.0%
GCATGGAATACATGTGTTAA+AGG - chr5_3:22059680-22059699 Msa0805420:intron 35.0%
! GCTAATATAGTTGTTGATGG+AGG - chr5_3:22059770-22059789 Msa0805420:CDS 35.0%
! AATATAGTTGTTGATGGAGG+TGG - chr5_3:22059773-22059792 Msa0805420:CDS 35.0%
GCTATAGTACTTTAGTGTAG+CGG + chr5_3:22059991-22060010 None:intergenic 35.0%
GCTATTATTTCATGGCATTG+TGG + chr5_3:22060015-22060034 None:intergenic 35.0%
! TGTCGTGTGCTATTATTTCA+TGG + chr5_3:22060023-22060042 None:intergenic 35.0%
CATTCTCAATTACGTGTTTG+TGG + chr5_3:22060049-22060068 None:intergenic 35.0%
CAAACACGTAATTGAGAATG+TGG - chr5_3:22060049-22060068 Msa0805420:intron 35.0%
! TGTTTATTGGCTGGAAAACA+CGG + chr5_3:22060099-22060118 None:intergenic 35.0%
!!! GCTGATTCCCTTTCTTTTTT+TGG - chr5_3:22060214-22060233 Msa0805420:intron 35.0%
TCAGGAGCCAAAAAAAGAAA+GGG + chr5_3:22060224-22060243 None:intergenic 35.0%
TTCAGGAGCCAAAAAAAGAA+AGG + chr5_3:22060225-22060244 None:intergenic 35.0%
AAGTAAATGTCCATCTGTTC+AGG + chr5_3:22060242-22060261 None:intergenic 35.0%
GAACAGATGGACATTTACTT+TGG - chr5_3:22060242-22060261 Msa0805420:intron 35.0%
AGAGAGTTAGAGAAGTGAAA+TGG + chr5_3:22060288-22060307 None:intergenic 35.0%
GAAAAACAAAGTCGATGAAC+AGG + chr5_3:22060432-22060451 None:intergenic 35.0%
! TAGAAGTTGCTTTAACCACA+AGG - chr5_3:22060530-22060549 Msa0805420:intron 35.0%
CTTTAACCACAAGGAATTTG+AGG - chr5_3:22060539-22060558 Msa0805420:intron 35.0%
TACGAACTCTTAGATAAGAC+AGG + chr5_3:22060630-22060649 None:intergenic 35.0%
TGTTGACAAAGACTCAAAGT+TGG + chr5_3:22060795-22060814 None:intergenic 35.0%
AAGTGTGCTAAATAAGGAGT+CGG + chr5_3:22061188-22061207 None:intergenic 35.0%
! TCCTTATTTAGCACACTTGT+TGG - chr5_3:22061190-22061209 Msa0805420:intron 35.0%
! CCTTATTTAGCACACTTGTT+GGG - chr5_3:22061191-22061210 Msa0805420:intron 35.0%
GTGTCAGAATTTATCATCGA+TGG - chr5_3:22061411-22061430 Msa0805420:intron 35.0%
GGATCTAGTTGTTACAATAC+TGG - chr5_3:22061432-22061451 Msa0805420:intron 35.0%
GCATATTGCAGAACAATAAC+GGG + chr5_3:22061780-22061799 None:intergenic 35.0%
CGCATATTGCAGAACAATAA+CGG + chr5_3:22061781-22061800 None:intergenic 35.0%
TTACAACACTTGGCTGAAAA+AGG - chr5_3:22061902-22061921 Msa0805420:intron 35.0%
CTTCATTCAAATAGTTGACC+AGG + chr5_3:22062014-22062033 None:intergenic 35.0%
GTAACAGAGAGACTGAATAA+TGG + chr5_3:22062137-22062156 None:intergenic 35.0%
ATTAACTGGTTAAACTTGGG+AGG - chr5_3:22062253-22062272 Msa0805420:intron 35.0%
CAACCAAATGAAGAAATCAC+AGG + chr5_3:22062434-22062453 None:intergenic 35.0%
CTGTGATTTCTTCATTTGGT+TGG - chr5_3:22062432-22062451 Msa0805420:intron 35.0%
!! ACATAGTTTTTAGGGACTGT+TGG - chr5_3:22062592-22062611 Msa0805420:CDS 35.0%
GGATGTGAAGTAGTTATGTT+TGG - chr5_3:22062697-22062716 Msa0805420:intron 35.0%
!! TATGTTTGCTTCCACTTTTG+GGG + chr5_3:22062881-22062900 None:intergenic 35.0%
!! GTATGTTTGCTTCCACTTTT+GGG + chr5_3:22062882-22062901 None:intergenic 35.0%
! TGTATGTTTGCTTCCACTTT+TGG + chr5_3:22062883-22062902 None:intergenic 35.0%
CATACATGAAAACTGTTTGG+AGG - chr5_3:22062897-22062916 Msa0805420:intron 35.0%
AAGCACAAATGCTTTCATGT+TGG + chr5_3:22062956-22062975 None:intergenic 35.0%
! GTTTTACCAAAGCGAAACAA+CGG + chr5_3:22063426-22063445 None:intergenic 35.0%
! TTCTAACCTTTTGTTACAGG+TGG - chr5_3:22063502-22063521 Msa0805420:CDS 35.0%
GACAAATCAAGGAAAGGATA+AGG + chr5_3:22063528-22063547 None:intergenic 35.0%
! CATATGGTGATGACAAATCA+AGG + chr5_3:22063539-22063558 None:intergenic 35.0%
ACTCAAATACACCATGCAAA+AGG - chr5_3:22063599-22063618 Msa0805420:CDS 35.0%
TGATATAGGGTGGAATGAAA+TGG - chr5_3:22063834-22063853 Msa0805420:intron 35.0%
! TGGTATATGGTGGAATGAAA+TGG + chr5_3:22063902-22063921 None:intergenic 35.0%
!!! TAGGGTGTGTTCGAATTTTT+TGG + chr5_3:22063922-22063941 None:intergenic 35.0%
AAAAATTCGAACACACCCTA+AGG - chr5_3:22063922-22063941 Msa0805420:intron 35.0%
CATAACCAATTGTTGCCTTA+GGG + chr5_3:22063940-22063959 None:intergenic 35.0%
TCATAACCAATTGTTGCCTT+AGG + chr5_3:22063941-22063960 None:intergenic 35.0%
!! TTGTTGGACTTTTAGGTACT+TGG - chr5_3:22064024-22064043 Msa0805420:intron 35.0%
AATGCAAAGAAGCCATAACA+TGG + chr5_3:22064070-22064089 None:intergenic 35.0%
AGCATTAGTCATTCTGTGTA+AGG - chr5_3:22064170-22064189 Msa0805420:intron 35.0%
GCATTAGTCATTCTGTGTAA+GGG - chr5_3:22064171-22064190 Msa0805420:intron 35.0%
CATTAGTCATTCTGTGTAAG+GGG - chr5_3:22064172-22064191 Msa0805420:intron 35.0%
GGAAAAACACCAATAGTTGT+TGG - chr5_3:22064193-22064212 Msa0805420:intron 35.0%
TTCGAAACTCCAACAACTAT+TGG + chr5_3:22064205-22064224 None:intergenic 35.0%
GGAAAAAAATGTACGTAGCA+AGG - chr5_3:22064357-22064376 Msa0805420:five_prime_UTR 35.0%
ATGAGTATATCAGTATGGAC+AGG + chr5_3:22064399-22064418 None:intergenic 35.0%
AGACAGAGAGAAGATGCTTT+GGG + chr5_3:22058817-22058836 None:intergenic 40.0%
CAAACAGGGCTAATATAGCT+AGG + chr5_3:22059162-22059181 None:intergenic 40.0%
CTAGCTATATTAGCCCTGTT+TGG - chr5_3:22059160-22059179 Msa0805420:intron 40.0%
CTGTAAGCAAGCAACCAATT+AGG + chr5_3:22059713-22059732 None:intergenic 40.0%
!!! TTTTTTGGCTCCTGAACAGA+TGG - chr5_3:22060229-22060248 Msa0805420:intron 40.0%
!! TTTTCATCTTTTTGGGGGGT+AGG - chr5_3:22060331-22060350 Msa0805420:intron 40.0%
!! TTTCATCTTTTTGGGGGGTA+GGG - chr5_3:22060332-22060351 Msa0805420:intron 40.0%
AGGTTCATCAGTTTCCTCTA+TGG + chr5_3:22060412-22060431 None:intergenic 40.0%
AACGCATTAGATACAGAACG+AGG - chr5_3:22060564-22060583 Msa0805420:intron 40.0%
TCAGAAATCCCATCAAGAGT+TGG + chr5_3:22060603-22060622 None:intergenic 40.0%
TAAGAGTTCGTATGCCAATC+AGG - chr5_3:22060638-22060657 Msa0805420:intron 40.0%
TCGATTGAGAGATTCCTGAT+TGG + chr5_3:22060655-22060674 None:intergenic 40.0%
TCTCTCAATCGAAATACAGC+TGG - chr5_3:22060663-22060682 Msa0805420:intron 40.0%
AGTTGTGATCTAGGGATACA+AGG + chr5_3:22061026-22061045 None:intergenic 40.0%
! GATAGTTAGTCTCTTCTCTG+AGG + chr5_3:22061049-22061068 None:intergenic 40.0%
ATGCCCTCTTCGTATATTGA+CGG - chr5_3:22061125-22061144 Msa0805420:intron 40.0%
GAACCGTCAATATACGAAGA+GGG + chr5_3:22061131-22061150 None:intergenic 40.0%
AGAACCGTCAATATACGAAG+AGG + chr5_3:22061132-22061151 None:intergenic 40.0%
!! CTAATCTGGCAAGTTTGTTG+AGG + chr5_3:22061156-22061175 None:intergenic 40.0%
! GTCGGTTTCATTTGCTAATC+TGG + chr5_3:22061170-22061189 None:intergenic 40.0%
CCCAACAAGTGTGCTAAATA+AGG + chr5_3:22061194-22061213 None:intergenic 40.0%
! CTTGATGTTGCTGTTGCATT+AGG - chr5_3:22061460-22061479 Msa0805420:intron 40.0%
! TTGCTGTTGCATTAGGACAT+TGG - chr5_3:22061467-22061486 Msa0805420:intron 40.0%
TTAGGACATTGGTAGACATC+TGG - chr5_3:22061478-22061497 Msa0805420:intron 40.0%
! AATGACCAGTAGTTTGCAGA+AGG - chr5_3:22062111-22062130 Msa0805420:intron 40.0%
AATATCCAGACGGAAGTCTT+TGG + chr5_3:22062385-22062404 None:intergenic 40.0%
AGTACAACTGATCTTATCCC+TGG - chr5_3:22062408-22062427 Msa0805420:intron 40.0%
AATGAAGAAATCACAGGCCA+GGG + chr5_3:22062428-22062447 None:intergenic 40.0%
AAATGAAGAAATCACAGGCC+AGG + chr5_3:22062429-22062448 None:intergenic 40.0%
TGGCCTGTGATTTCTTCATT+TGG - chr5_3:22062428-22062447 Msa0805420:intron 40.0%
!! TAAAGCTTTTGGGGACTGTT+CGG - chr5_3:22062482-22062501 Msa0805420:CDS 40.0%
TTTATTACCTCCCCCAAAAG+TGG - chr5_3:22062867-22062886 Msa0805420:intron 40.0%
!! ATGTTTGCTTCCACTTTTGG+GGG + chr5_3:22062880-22062899 None:intergenic 40.0%
GAAGATGCAGAAAGGTGAAT+AGG - chr5_3:22063066-22063085 Msa0805420:intron 40.0%
TTCAATTTGCAGTTCACCGT+TGG - chr5_3:22063184-22063203 Msa0805420:intron 40.0%
GTTAACAGAGTGCATACCAA+CGG + chr5_3:22063203-22063222 None:intergenic 40.0%
AGTTCAATGATGTTTCGCCA+AGG + chr5_3:22063237-22063256 None:intergenic 40.0%
CGAAACATCATTGAACTGCA+TGG - chr5_3:22063240-22063259 Msa0805420:intron 40.0%
ATAAGGCCACCTGTAACAAA+AGG + chr5_3:22063511-22063530 None:intergenic 40.0%
GGTGATGACAAATCAAGGAA+AGG + chr5_3:22063534-22063553 None:intergenic 40.0%
! ACATACCATAAGGGTGCATA+TGG + chr5_3:22063555-22063574 None:intergenic 40.0%
!! ATTGCTGATTCGGGTATGTT+TGG - chr5_3:22063806-22063825 Msa0805420:intron 40.0%
TTTGGATCAGTGATATAGGG+TGG - chr5_3:22063824-22063843 Msa0805420:intron 40.0%
!! CAAGTTTGTTGGCATCTTGT+TGG - chr5_3:22064008-22064027 Msa0805420:intron 40.0%
! TGGCATCTTGTTGGACTTTT+AGG - chr5_3:22064017-22064036 Msa0805420:intron 40.0%
!! ACTTTTAGGTACTTGGCTGT+TGG - chr5_3:22064031-22064050 Msa0805420:intron 40.0%
! TAGTGAAGTTGAAGCACTTG+TGG - chr5_3:22064092-22064111 Msa0805420:intron 40.0%
! CTGGTTCTTGTCAGTTTCTA+CGG - chr5_3:22064131-22064150 Msa0805420:intron 40.0%
ACACAGAATGACTAATGCTG+TGG + chr5_3:22064169-22064188 None:intergenic 40.0%
TTGTTGGAGTTTCGAAACCT+TGG - chr5_3:22064209-22064228 Msa0805420:intron 40.0%
AGTATATCAGTATGGACAGG+AGG + chr5_3:22064396-22064415 None:intergenic 40.0%
GAGACAGAGAGAAGATGCTT+TGG + chr5_3:22058818-22058837 None:intergenic 45.0%
CAGGATTCTCAAGCCAAACT+TGG - chr5_3:22059453-22059472 Msa0805420:intron 45.0%
AGAAATGAGAGGGTGGAAGA+AGG - chr5_3:22059620-22059639 Msa0805420:intron 45.0%
GAAATGAGAGGGTGGAAGAA+GGG - chr5_3:22059621-22059640 Msa0805420:intron 45.0%
GAGTGGAAGTCACTTAGAGA+AGG + chr5_3:22060471-22060490 None:intergenic 45.0%
CGTTTCCCTCAAATTCCTTG+TGG + chr5_3:22060548-22060567 None:intergenic 45.0%
! TACAGAACGAGGCACTTATG+TGG - chr5_3:22060575-22060594 Msa0805420:intron 45.0%
TATGTGGCTCCAACTCTTGA+TGG - chr5_3:22060591-22060610 Msa0805420:intron 45.0%
ATGTGGCTCCAACTCTTGAT+GGG - chr5_3:22060592-22060611 Msa0805420:intron 45.0%
ATCGAAATACAGCTGGTGTG+TGG - chr5_3:22060670-22060689 Msa0805420:intron 45.0%
TCGAAATACAGCTGGTGTGT+GGG - chr5_3:22060671-22060690 Msa0805420:intron 45.0%
! CTCTGAGGAGTTGTGATCTA+GGG + chr5_3:22061034-22061053 None:intergenic 45.0%
! TCTCTGAGGAGTTGTGATCT+AGG + chr5_3:22061035-22061054 None:intergenic 45.0%
GTCAATATACGAAGAGGGCA+TGG + chr5_3:22061126-22061145 None:intergenic 45.0%
! TTAGCACACTTGTTGGGCTT+AGG - chr5_3:22061197-22061216 Msa0805420:intron 45.0%
CCAGGACTTTCTGATCTAGA+AGG + chr5_3:22061996-22062015 None:intergenic 45.0%
CCTTCTAGATCAGAAAGTCC+TGG - chr5_3:22061993-22062012 Msa0805420:intron 45.0%
AATGGCCTTCTGCAAACTAC+TGG + chr5_3:22062119-22062138 None:intergenic 45.0%
TGCTCACTGACCTTGTATTC+TGG - chr5_3:22062334-22062353 Msa0805420:intron 45.0%
TAGTCAATGTCTAGCACAGG+CGG + chr5_3:22062982-22063001 None:intergenic 45.0%
TCAATGATGTTTCGCCAAGG+AGG + chr5_3:22063234-22063253 None:intergenic 45.0%
CATCACCATATGCACCCTTA+TGG - chr5_3:22063547-22063566 Msa0805420:CDS 45.0%
ACACACCCTAAGGCAACAAT+TGG - chr5_3:22063932-22063951 Msa0805420:intron 45.0%
TGGTTGTCGAGATTGTTCTC+TGG - chr5_3:22064112-22064131 Msa0805420:intron 45.0%
!! ATAAAATATTTATGAAATAA+AGG - chr5_3:22059279-22059298 Msa0805420:intron 5.0%
CGAAATACAGCTGGTGTGTG+GGG - chr5_3:22060672-22060691 Msa0805420:intron 50.0%
! TACGAAGAGGGCATGGTGAA+GGG + chr5_3:22061119-22061138 None:intergenic 50.0%
! ATACGAAGAGGGCATGGTGA+AGG + chr5_3:22061120-22061139 None:intergenic 50.0%
GACATCCAAAGACTTCCGTC+TGG - chr5_3:22062377-22062396 Msa0805420:intron 50.0%
!! TTTGCTTCCACTTTTGGGGG+AGG + chr5_3:22062877-22062896 None:intergenic 50.0%
AGTCAATGTCTAGCACAGGC+GGG + chr5_3:22062981-22063000 None:intergenic 50.0%
CGGTAGTCAATGTCTAGCAC+AGG + chr5_3:22062985-22063004 None:intergenic 50.0%
! TCCATGCCGTTGTTTCGCTT+TGG - chr5_3:22063417-22063436 Msa0805420:CDS 50.0%
ACCAAAGCGAAACAACGGCA+TGG + chr5_3:22063421-22063440 None:intergenic 50.0%
GGAAGAAGGGCGACGAGAAA+CGG - chr5_3:22059634-22059653 Msa0805420:CDS 55.0%
!! CATCTTTTTGGGGGGTAGGG+TGG - chr5_3:22060335-22060354 Msa0805420:intron 55.0%
TTGGGGGGTAGGGTGGAATT+TGG - chr5_3:22060342-22060361 Msa0805420:intron 55.0%
GTTGGGCTTAGGCACAAACC+AGG - chr5_3:22061208-22061227 Msa0805420:intron 55.0%
GTTAACGCTGTGCTCCTCCT+TGG - chr5_3:22063217-22063236 Msa0805420:intron 55.0%
GAAGGGCGACGAGAAACGGT+TGG - chr5_3:22059638-22059657 Msa0805420:CDS 60.0%
! GAAGAGGGCATGGTGAAGGG+AGG + chr5_3:22061116-22061135 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 22058767 22064427 22058767 ID=Msa0805420;Name=Msa0805420
chr5_3 mRNA 22058767 22064427 22058767 ID=Msa0805420-mRNA-1;Parent=Msa0805420;Name=Msa0805420-mRNA-1;_AED=0.09;_eAED=0.09;_QI=175|1|1|1|0.62|0.55|9|271|328
chr5_3 exon 22058767 22059155 22058767 ID=Msa0805420-mRNA-1:exon:8812;Parent=Msa0805420-mRNA-1
chr5_3 exon 22059626 22059673 22059626 ID=Msa0805420-mRNA-1:exon:8811;Parent=Msa0805420-mRNA-1
chr5_3 exon 22059756 22059847 22059756 ID=Msa0805420-mRNA-1:exon:8810;Parent=Msa0805420-mRNA-1
chr5_3 exon 22059933 22059998 22059933 ID=Msa0805420-mRNA-1:exon:8809;Parent=Msa0805420-mRNA-1
chr5_3 exon 22060790 22060879 22060790 ID=Msa0805420-mRNA-1:exon:8808;Parent=Msa0805420-mRNA-1
chr5_3 exon 22062475 22062687 22062475 ID=Msa0805420-mRNA-1:exon:8807;Parent=Msa0805420-mRNA-1
chr5_3 exon 22062913 22062946 22062913 ID=Msa0805420-mRNA-1:exon:8806;Parent=Msa0805420-mRNA-1
chr5_3 exon 22063378 22063760 22063378 ID=Msa0805420-mRNA-1:exon:8805;Parent=Msa0805420-mRNA-1
chr5_3 exon 22064310 22064427 22064310 ID=Msa0805420-mRNA-1:exon:8804;Parent=Msa0805420-mRNA-1
chr5_3 five_prime_UTR 22064310 22064427 22064310 ID=Msa0805420-mRNA-1:five_prime_utr;Parent=Msa0805420-mRNA-1
chr5_3 five_prime_UTR 22063704 22063760 22063704 ID=Msa0805420-mRNA-1:five_prime_utr;Parent=Msa0805420-mRNA-1
chr5_3 CDS 22063378 22063703 22063378 ID=Msa0805420-mRNA-1:cds;Parent=Msa0805420-mRNA-1
chr5_3 CDS 22062913 22062946 22062913 ID=Msa0805420-mRNA-1:cds;Parent=Msa0805420-mRNA-1
chr5_3 CDS 22062475 22062687 22062475 ID=Msa0805420-mRNA-1:cds;Parent=Msa0805420-mRNA-1
chr5_3 CDS 22060790 22060879 22060790 ID=Msa0805420-mRNA-1:cds;Parent=Msa0805420-mRNA-1
chr5_3 CDS 22059933 22059998 22059933 ID=Msa0805420-mRNA-1:cds;Parent=Msa0805420-mRNA-1
chr5_3 CDS 22059756 22059847 22059756 ID=Msa0805420-mRNA-1:cds;Parent=Msa0805420-mRNA-1
chr5_3 CDS 22059626 22059673 22059626 ID=Msa0805420-mRNA-1:cds;Parent=Msa0805420-mRNA-1
chr5_3 CDS 22059038 22059155 22059038 ID=Msa0805420-mRNA-1:cds;Parent=Msa0805420-mRNA-1
chr5_3 three_prime_UTR 22058767 22059037 22058767 ID=Msa0805420-mRNA-1:three_prime_utr;Parent=Msa0805420-mRNA-1
Gene Sequence

>Msa0805420

ATGACACAAGATACTAATACCTTGAGTTATTGGTTGAATTGGAGATTCTTCATATGTGCAATATTTCTTTTATTAACTATGGGCTTAGGATCATTTTTGATATGGAAGTATGAAGAATTCAGTAAATCAAGAAATGAGAGGGTGGAAGAAGGGCGACGAGAAACGGTTGGATTGCTATATGAAGATGAAGCATGGAATACATGTGTTAAAGGAATTCATCCTAATTGGTTGCTTGCTTACAGAATAATTTCTTTTTTTGTGCTTTTGGGTTTGCTCACTGCTAATATAGTTGTTGATGGAGGTGGCATTTTTTACTTCTACACTCAATGGACATTTACTTTGGTCACTATTTACTTTGCGCTTGCATCTTGTTTTTCCTTCTATAGAAGTTGCTTTAACCACAAGGAATTTGAGGGAAACGCATTAGATACAGAACGAGGCACTTATGTGGCTCCAACTCTTGATGGGATTTCTGATATACCTGTCTTATCTAAGAGTTCGTATGCCAATCAGGAATCTCTCAATCGAAATACAGCTGGTGTGTGGGGTTATATTATTCAAATATTATTTCAGACTTGTGCAGGTGCTGCAATGCTCACTGACCTTGTATTCTGGCTTGTTATTTATCCGTTTATGACATCCAAAGACTTCCGTCTGGATATTTTCACCGTTGGTATGCACTCTGTTAACGCTGTGCTCCTCCTTGGCGAAACATCATTGAACTGCATGAGCTTTCCAGTGTTTCGATTTGCATATTTTATCTTGTGGACGGCTACATTTGTGATTTTTCAGTGGATCGTCCATGCCGTTGTTTCGCTTTGGTGGCCTTATCCTTTCCTTGATTTGTCATCACCATATGCACCCTTATGGTACTTGGCTGTTGGTATAATGCACATTCCATGTTATGGCTTCTTTGCATTAATAGTGAAGTTGAAGCACTTGTGGTTGTCGAGATTGTTCTCTGGTTCTTGTCAGTTTCTACGGTGA

Protein sequence

>Msa0805420

MTQDTNTLSYWLNWRFFICAIFLLLTMGLGSFLIWKYEEFSKSRNERVEEGRRETVGLLYEDEAWNTCVKGIHPNWLLAYRIISFFVLLGLLTANIVVDGGGIFYFYTQWTFTLVTIYFALASCFSFYRSCFNHKEFEGNALDTERGTYVAPTLDGISDIPVLSKSSYANQESLNRNTAGVWGYIIQILFQTCAGAAMLTDLVFWLVIYPFMTSKDFRLDIFTVGMHSVNAVLLLGETSLNCMSFPVFRFAYFILWTATFVIFQWIVHAVVSLWWPYPFLDLSSPYAPLWYLAVGIMHIPCYGFFALIVKLKHLWLSRLFSGSCQFLR*