AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0381080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0381080 MtrunA17_Chr3g0134751 97.005 868 19 3 1 867 1 862 0.0 1721
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0381080 AT1G27752.1 51.492 905 369 14 1 867 1 873 0.0 724
Msa0381080 AT1G27752.2 49.034 673 295 10 212 867 15 656 7.14e-173 516

Find 258 sgRNAs with CRISPR-Local

Find 586 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCCTCTCCCTCTGTTATT+TGG 0.136498 3_1:-83063652 None:intergenic
TTAGCATTGGCTCTGGCCTC+TGG 0.143548 3_1:+83064356 Msa0381080:three_prime_UTR
TCAACAGCTTTCTGCAATTT+AGG 0.158835 3_1:+83056988 Msa0381080:CDS
CAACTAAACATTAAAGTTAA+AGG 0.170211 3_1:-83064215 None:intergenic
GACTTTCATGTGTTCTGTTT+TGG 0.172138 3_1:+83063978 Msa0381080:three_prime_UTR
GGTAACCAATTCCATGTTTC+TGG 0.178074 3_1:+83063505 Msa0381080:CDS
CTATGCTCCCAGATTAAAAT+TGG 0.206599 3_1:+83064276 Msa0381080:three_prime_UTR
CAGGCCTGATCCAAGTATTT+TGG 0.209716 3_1:+83063069 Msa0381080:CDS
GAAGAAATGTTTCCTTCTTA+TGG 0.219000 3_1:-83062217 None:intergenic
ATTCTTTGAATGACCTCTTC+TGG 0.235306 3_1:-83062770 None:intergenic
GAACAACTTAAATATATATC+TGG 0.239896 3_1:+83062557 Msa0381080:CDS
TGAAACTAGCCAGAGTTATA+TGG 0.244718 3_1:-83063799 None:intergenic
AAAACGCCTCTAATACAAAA+TGG 0.245784 3_1:+83063278 Msa0381080:CDS
AGAATGAGATTGGTAAAGTT+TGG 0.246664 3_1:+83062020 Msa0381080:CDS
GTACAGGTCTTATTTGCTTC+TGG 0.257207 3_1:+83060750 Msa0381080:intron
GACATGGTGTATTGCTCTTC+TGG 0.258029 3_1:+83063877 Msa0381080:three_prime_UTR
TAGCATTGGCTCTGGCCTCT+GGG 0.277520 3_1:+83064357 Msa0381080:three_prime_UTR
TTTAAAAGGGTAATTATCTA+AGG 0.284972 3_1:-83064520 None:intergenic
GAAGCTGTCGCTGCTGGTTT+TGG 0.286863 3_1:+83056403 Msa0381080:CDS
CTTCATCTGTCTGCATGGTT+TGG 0.298863 3_1:-83062646 None:intergenic
TTTCCTTCTTATGGATTTCC+TGG 0.302068 3_1:-83062208 None:intergenic
AGACAATTACAACAACAATA+AGG 0.304335 3_1:+83056201 Msa0381080:CDS
AGAGGTAGAGGAAGGGGAGG+AGG 0.310111 3_1:+83063673 Msa0381080:CDS
TACAGTATCATTAAGTTTCC+AGG 0.314193 3_1:+83062190 Msa0381080:CDS
ACAGAGATCTTTGCAGAATA+TGG 0.326279 3_1:-83062617 None:intergenic
TTCATACCGGAATCCAGTTT+TGG 0.327117 3_1:+83064144 Msa0381080:three_prime_UTR
CTACCCTACTTAGTGGAATA+AGG 0.328288 3_1:+83064474 Msa0381080:three_prime_UTR
TTAGGGAAGTTGACAAGGTT+GGG 0.332272 3_1:-83056267 None:intergenic
TCGGGGAAATCAAGGGAAAC+AGG 0.333370 3_1:+83063238 Msa0381080:CDS
CAACAAACTGGTTCTGGTTC+TGG 0.333487 3_1:+83056301 Msa0381080:CDS
TGGCTTGGTCCTTCCTGTAA+TGG 0.336786 3_1:-83063705 None:intergenic
TCCAGAGAAATGCTTCTTCA+TGG 0.337644 3_1:-83063725 None:intergenic
AGAGGGAGTGGCGGTGGCAG+GGG 0.340036 3_1:+83063538 Msa0381080:CDS
AGAGGGAGAGGTAGAGGAAG+GGG 0.352690 3_1:+83063667 Msa0381080:CDS
CAAAACTAGATAACCAAAAC+TGG 0.356578 3_1:-83064157 None:intergenic
TCAAATACAAAAGTTTCTAA+TGG 0.357068 3_1:+83062971 Msa0381080:CDS
GTTACCACCTCCTCCCTTGT+AGG 0.357080 3_1:-83063488 None:intergenic
TTCGTCAGGTAGGGTTCAAC+CGG 0.357397 3_1:+83056339 Msa0381080:CDS
CTGTTCCAGAAACATGGAAT+TGG 0.362186 3_1:-83063510 None:intergenic
AAGAAATACCTCATCTCAAC+AGG 0.364953 3_1:-83061651 None:intergenic
CTGGAAGAGGGATGCTATCT+AGG 0.368744 3_1:-83062085 None:intergenic
GAATGAGATTGGTAAAGTTT+GGG 0.371262 3_1:+83062021 Msa0381080:CDS
GGAGAGGGAGTGGCGGTGGC+AGG 0.373843 3_1:+83063536 Msa0381080:CDS
TTGACTGGTAAAGTCTACTA+TGG 0.375504 3_1:+83063945 Msa0381080:three_prime_UTR
GGTCTAAGCGTAGCAGAATC+TGG 0.375638 3_1:+83063172 Msa0381080:CDS
CTTTGAAGGAGACTATTAAC+AGG 0.377429 3_1:+83062591 Msa0381080:CDS
AAACAACAACAAACTGGTTC+TGG 0.379109 3_1:+83056295 Msa0381080:CDS
AGAGGGAGAGGGAGAGGTAG+AGG 0.379505 3_1:+83063661 Msa0381080:CDS
TATTCCCTGATTACGGTAAA+GGG 0.381006 3_1:+83062711 Msa0381080:CDS
CCCGCTAACAGCAGTGGACT+TGG 0.382935 3_1:-83062864 None:intergenic
GAAGATGTTAAGAATGAGAT+TGG 0.384834 3_1:+83062010 Msa0381080:CDS
GAAGGGAGAGGGAGTGGCGG+TGG 0.388652 3_1:+83063532 Msa0381080:CDS
GACAATTACAACAACAATAA+GGG 0.388889 3_1:+83056202 Msa0381080:CDS
AGATGCTGAGCTTCCTTGCC+AGG 0.390370 3_1:+83061892 Msa0381080:CDS
GGGAGAGGTAGAGGAAGGGG+AGG 0.392878 3_1:+83063670 Msa0381080:CDS
AGTTGAGAAGCATTTGTATA+CGG 0.393223 3_1:+83056079 Msa0381080:five_prime_UTR
AAGGCTCGGTTGTTGTTCAT+TGG 0.397684 3_1:+83064493 Msa0381080:three_prime_UTR
GGGGCTAGAGGGATTGTTGC+TGG 0.398706 3_1:+83057038 Msa0381080:CDS
ACGATGCAGTTCATCATTAG+AGG 0.402493 3_1:+83059703 Msa0381080:CDS
AAACGCCTCTAATACAAAAT+GGG 0.406638 3_1:+83063279 Msa0381080:CDS
TCATTATTGTCCAAAATACT+TGG 0.412008 3_1:-83063079 None:intergenic
GAGGTAGAAACAACCATTAC+AGG 0.412585 3_1:+83063692 Msa0381080:CDS
AGAATATCTGCTCTGATGAC+TGG 0.413031 3_1:-83062143 None:intergenic
AGGGACCTATTCCCTGATTA+CGG 0.415459 3_1:+83062704 Msa0381080:CDS
TCTGTCTGCATGGTTTGGTT+CGG 0.416658 3_1:-83062641 None:intergenic
CAAGATGAAGCTGTCGCTGC+TGG 0.420506 3_1:+83056397 Msa0381080:CDS
GAAACTAGCCAGAGTTATAT+GGG 0.426798 3_1:-83063798 None:intergenic
CAAATACAAAAGTTTCTAAT+GGG 0.429323 3_1:+83062972 Msa0381080:CDS
GGCAGGGGAAAGAGAGAAGG+GGG 0.431243 3_1:+83063553 Msa0381080:CDS
AGTCATCAGAGCAGATATTC+TGG 0.434434 3_1:+83062145 Msa0381080:CDS
GGAAACATCTTTGTGGCAGC+TGG 0.434595 3_1:-83062104 None:intergenic
CTATTCCCTGATTACGGTAA+AGG 0.437817 3_1:+83062710 Msa0381080:CDS
CTTTACCGTAATCAGGGAAT+AGG 0.437909 3_1:-83062709 None:intergenic
TTTCTCCTCCTTGGGAAGCA+TGG 0.441829 3_1:+83063914 Msa0381080:three_prime_UTR
CAACAACTTTCTGAGATTCA+AGG 0.442201 3_1:-83056450 None:intergenic
AAATGCTTCTCAACTGACTT+AGG 0.443806 3_1:-83056071 None:intergenic
AGCAATAGCAATACTTCGTC+AGG 0.449539 3_1:+83056325 Msa0381080:CDS
GCTAATTCCGTCCATGCAAA+AGG 0.451122 3_1:+83061926 Msa0381080:CDS
CTTAGGGAAGTTGACAAGGT+TGG 0.451960 3_1:-83056268 None:intergenic
GGAGAGGGAGAGGTAGAGGA+AGG 0.452918 3_1:+83063665 Msa0381080:CDS
AGAAATGCTTCTTCATGGCT+TGG 0.453241 3_1:-83063720 None:intergenic
ATCTTTGTGGCAGCTGGAAG+AGG 0.454654 3_1:-83062098 None:intergenic
TTGTCCAAAATACTTGGATC+AGG 0.456872 3_1:-83063073 None:intergenic
ATCAGAGCTACCCTACTTAG+TGG 0.456936 3_1:+83064467 Msa0381080:intron
TCGAGCACCAGGATCTCTAT+TGG 0.458199 3_1:-83057209 None:intergenic
AGCCAGAGTTATATGGGTAT+TGG 0.459362 3_1:-83063792 None:intergenic
AGATAACCAAAACTGGATTC+CGG 0.460121 3_1:-83064150 None:intergenic
TGCAGAATTGACAAGATTGC+TGG 0.460148 3_1:+83058632 Msa0381080:CDS
GCCATGAAGAAGCATTTCTC+TGG 0.460962 3_1:+83063724 Msa0381080:CDS
AAATGATGCAATTGTGTCAA+TGG 0.462048 3_1:+83061581 Msa0381080:CDS
GCCTCTGGGGTCGAAGTCAT+AGG 0.462221 3_1:+83064371 Msa0381080:three_prime_UTR
AAAGAATTGATACATGGTCT+TGG 0.465801 3_1:+83063418 Msa0381080:CDS
AGATATATATAAAATAAAAC+AGG 0.466673 3_1:+83064239 Msa0381080:three_prime_UTR
GCAGGGGAAAGAGAGAAGGG+GGG 0.466831 3_1:+83063554 Msa0381080:CDS
GCTTTCTGCAATTTAGGAGC+AGG 0.469684 3_1:+83056994 Msa0381080:CDS
ATTAAAGTTAAAGGAAATGT+AGG 0.469688 3_1:-83064206 None:intergenic
AAGAAGGAAACATTTCTTCA+AGG 0.470689 3_1:+83062221 Msa0381080:CDS
CAATATATCAAGCAGGATTG+AGG 0.471607 3_1:+83062259 Msa0381080:CDS
GCCAAGTCCACTGCTGTTAG+CGG 0.473751 3_1:+83062863 Msa0381080:CDS
AGCGGGAAAGAGAAAGGAAA+AGG 0.473781 3_1:+83062920 Msa0381080:CDS
AATATATCAAGCAGGATTGA+GGG 0.474349 3_1:+83062260 Msa0381080:CDS
TTGATACATGGTCTTGGACG+TGG 0.478904 3_1:+83063424 Msa0381080:CDS
GAGAGGGAGTGGCGGTGGCA+GGG 0.479141 3_1:+83063537 Msa0381080:CDS
AATGCTAACCCTCCTTTGAA+TGG 0.480130 3_1:-83064341 None:intergenic
ATTGAGGGATTACAGCATAA+TGG 0.481131 3_1:+83062275 Msa0381080:CDS
AAGAGTTTAATGTCTTGTAA+AGG 0.482216 3_1:+83064117 Msa0381080:three_prime_UTR
CATTTCTTCAAGGTGTTGAA+AGG 0.482501 3_1:+83062231 Msa0381080:CDS
TTCCCTCACCGTGGGGCTAG+AGG 0.483084 3_1:+83057026 Msa0381080:CDS
AATTACAGCTACAAAGTGTC+TGG 0.483452 3_1:+83063343 Msa0381080:CDS
TTTCCAAGTGGAGCAGATGA+TGG 0.483469 3_1:-83063022 None:intergenic
CTAATACAAAATGGGGCTCT+AGG 0.483722 3_1:+83063287 Msa0381080:CDS
TCATAATGATCTGAAGTGCT+TGG 0.485164 3_1:+83062808 Msa0381080:CDS
CTAATTCCGTCCATGCAAAA+GGG 0.486927 3_1:+83061927 Msa0381080:CDS
GTGGCAGGGGAAAGAGAGAA+GGG 0.488538 3_1:+83063551 Msa0381080:CDS
ATGCTTTGCATGCTCAGCCT+TGG 0.488541 3_1:+83059618 Msa0381080:CDS
CAGAAAATGTCGAATCGTTA+CGG 0.489738 3_1:+83056166 Msa0381080:exon
GCATCAATGACCCTTCTGTC+AGG 0.490097 3_1:-83063000 None:intergenic
ATGTCGAATCGTTACGGTCA+AGG 0.491585 3_1:+83056172 Msa0381080:CDS
GGAACAGAAGGGAGAGGGAG+TGG 0.492302 3_1:+83063526 Msa0381080:CDS
GAATGACCTCTTCTGGATTG+TGG 0.492612 3_1:-83062763 None:intergenic
GAGAGGGAGAGGTAGAGGAA+GGG 0.495109 3_1:+83063666 Msa0381080:CDS
AATAACAGAGGGAGAGGGAG+AGG 0.496230 3_1:+83063655 Msa0381080:CDS
TCCCTCACCGTGGGGCTAGA+GGG 0.496525 3_1:+83057027 Msa0381080:CDS
GCTCGGTTGTTGTTCATTGG+AGG 0.496796 3_1:+83064496 Msa0381080:three_prime_UTR
GCACATATATCAAACAACTT+TGG 0.497604 3_1:-83058591 None:intergenic
CGAGCCTTATTCCACTAAGT+AGG 0.498790 3_1:-83064478 None:intergenic
ATGCCATCATCTGCTCCACT+TGG 0.499405 3_1:+83063019 Msa0381080:CDS
GCTGTTAGCGGGAAAGATAA+AGG 0.500884 3_1:+83062875 Msa0381080:CDS
AGCATCTTCATCTGTCTGCA+TGG 0.503904 3_1:-83062651 None:intergenic
TAACTTTAGATATGGGAATG+AGG 0.504342 3_1:+83061869 Msa0381080:intron
TGGCAGGGGAAAGAGAGAAG+GGG 0.504607 3_1:+83063552 Msa0381080:CDS
GTGTACTAATTGATGTTAGC+GGG 0.504771 3_1:+83062903 Msa0381080:CDS
TTCCATGTTTCTGGAACAGA+AGG 0.505044 3_1:+83063514 Msa0381080:CDS
GTCAGGTAGGGTTCAACCGG+GGG 0.505227 3_1:+83056342 Msa0381080:CDS
AGGTCTTCCAATAGAGATCC+TGG 0.508009 3_1:+83057202 Msa0381080:intron
GATGACTGGGTCTTCAACAT+TGG 0.511843 3_1:-83062129 None:intergenic
AAATTGGGCGTAGTTGACTA+AGG 0.512251 3_1:+83064292 Msa0381080:three_prime_UTR
GAATATCTGCTCTGATGACT+GGG 0.512641 3_1:-83062142 None:intergenic
TATTGAACATAATCAACATC+AGG 0.514043 3_1:+83063582 Msa0381080:CDS
GATGTTAGCGGGAAAGAGAA+AGG 0.515540 3_1:+83062914 Msa0381080:CDS
ACTGGGTCTTCAACATTGGC+AGG 0.519457 3_1:-83062125 None:intergenic
TCTTGGCGCGGTACAGAAGT+TGG 0.521142 3_1:+83063459 Msa0381080:CDS
GAAACAGGGACCGGAAACTC+TGG 0.522351 3_1:+83063253 Msa0381080:CDS
TCCCTTCTGTTCCAGAAACA+TGG 0.523000 3_1:-83063516 None:intergenic
TTCTCTTAGGGAAGTTGACA+AGG 0.525769 3_1:-83056272 None:intergenic
GGTGGCAGGGGAAAGAGAGA+AGG 0.525868 3_1:+83063550 Msa0381080:CDS
TTTCCAGGAAATCCATAAGA+AGG 0.527622 3_1:+83062205 Msa0381080:CDS
AAATCAAGGGAAACAGGGAC+CGG 0.528322 3_1:+83063244 Msa0381080:CDS
GGTCCAAATAACAGAGGGAG+AGG 0.528474 3_1:+83063649 Msa0381080:CDS
CCAAGTCCACTGCTGTTAGC+GGG 0.528738 3_1:+83062864 Msa0381080:CDS
AACAACTTAAATATATATCT+GGG 0.529820 3_1:+83062558 Msa0381080:CDS
GTATCAGCTGGTCGAGCACC+AGG 0.532811 3_1:-83057220 None:intergenic
GGAATTTCAATATATCAAGC+AGG 0.534239 3_1:+83062252 Msa0381080:CDS
GATTCCTACAAGGGAGGAGG+TGG 0.536721 3_1:+83063484 Msa0381080:CDS
AGCATGGCTCATACATTGAC+TGG 0.536740 3_1:+83063930 Msa0381080:three_prime_UTR
TATGCTCCCAGATTAAAATT+GGG 0.538998 3_1:+83064277 Msa0381080:three_prime_UTR
TCCCTCTAGCCCCACGGTGA+GGG 0.540839 3_1:-83057028 None:intergenic
ATTGGCAGGAAACATCTTTG+TGG 0.542013 3_1:-83062111 None:intergenic
GAAGTGGAGGGTAGAGATCA+AGG 0.542597 3_1:+83063628 Msa0381080:CDS
TTGTAAAGGTTACTTCATAC+CGG 0.543313 3_1:+83064131 Msa0381080:three_prime_UTR
CCACAGTACTATGTCAAAGA+TGG 0.543656 3_1:+83063316 Msa0381080:CDS
GGTATGATTTCCCTCACCGT+GGG 0.544651 3_1:+83057018 Msa0381080:CDS
AAGCATTTCTCTGGATTGAG+TGG 0.544793 3_1:+83063733 Msa0381080:CDS
ATCTTTCCCGCTAACAGCAG+TGG 0.545828 3_1:-83062870 None:intergenic
AGCGGGAAAGATAAAGGAAA+AGG 0.546036 3_1:+83062881 Msa0381080:CDS
TGATACATGGTCTTGGACGT+GGG 0.546273 3_1:+83063425 Msa0381080:CDS
GCAGCGACAGCTTCATCTTG+CGG 0.550531 3_1:-83056394 None:intergenic
ATCTGGGAGCATAGTTGAGT+CGG 0.550770 3_1:-83064267 None:intergenic
CGGGGAAATCAAGGGAAACA+GGG 0.551304 3_1:+83063239 Msa0381080:CDS
AGTCCTTGTTGATTGAGACT+TGG 0.551375 3_1:+83064018 Msa0381080:three_prime_UTR
GCGAATCATGCAACCTGGCA+AGG 0.551653 3_1:-83061905 None:intergenic
TTCTGCAATTTAGGAGCAGG+TGG 0.552113 3_1:+83056997 Msa0381080:CDS
TGGCGCAGAAGATGGTGGAT+TGG 0.552284 3_1:+83056423 Msa0381080:CDS
TAGGGAAGTTGACAAGGTTG+GGG 0.554340 3_1:-83056266 None:intergenic
AACAACTTTCTGAGATTCAA+GGG 0.557535 3_1:-83056449 None:intergenic
CGTCAGGTAGGGTTCAACCG+GGG 0.558173 3_1:+83056341 Msa0381080:CDS
CTGTTGATGCCATTCAAAGG+AGG 0.559391 3_1:+83064332 Msa0381080:three_prime_UTR
TAGTAAGAAATGTATGTTGA+TGG 0.559472 3_1:-83063768 None:intergenic
TCTCTTCCCCTGTTGAGATG+AGG 0.560513 3_1:+83061643 Msa0381080:CDS
AGGAGGGTTAGCATTGGCTC+TGG 0.560877 3_1:+83064349 Msa0381080:three_prime_UTR
GAGCCTTATTCCACTAAGTA+GGG 0.561107 3_1:-83064477 None:intergenic
TCGTCAGGTAGGGTTCAACC+GGG 0.564089 3_1:+83056340 Msa0381080:CDS
TGACTGTTGATGCCATTCAA+AGG 0.567703 3_1:+83064329 Msa0381080:three_prime_UTR
AGCCAATACCCATATAACTC+TGG 0.573207 3_1:+83063790 Msa0381080:three_prime_UTR
TAGCAATACTTCGTCAGGTA+GGG 0.573778 3_1:+83056330 Msa0381080:CDS
CTCCACTTGGAAAATTTGTG+AGG 0.575856 3_1:+83063032 Msa0381080:CDS
GCTGTTGAGAAACTCATGTA+GGG 0.577070 3_1:-83056973 None:intergenic
ATAGCAATACTTCGTCAGGT+AGG 0.577589 3_1:+83056329 Msa0381080:CDS
CTACTTAGTGGAATAAGGCT+CGG 0.581146 3_1:+83064479 Msa0381080:three_prime_UTR
AAAACCCTTTACCGTAATCA+GGG 0.581322 3_1:-83062715 None:intergenic
TCTGTACCGCGCCAAGAGGA+AGG 0.584919 3_1:-83063453 None:intergenic
TCTTTGTGGCAGCTGGAAGA+GGG 0.585342 3_1:-83062097 None:intergenic
ATCAAGGTCCAAATAACAGA+GGG 0.586072 3_1:+83063644 Msa0381080:CDS
CTTGGATACTTCATTAGAGA+CGG 0.588179 3_1:+83062826 Msa0381080:CDS
GGTGTACTAATTGATGTTAG+CGG 0.589017 3_1:+83062902 Msa0381080:CDS
ATCTGATGATGTTTCTGAAG+TGG 0.590047 3_1:+83063612 Msa0381080:CDS
ACAGAAGGGAGAGGGAGTGG+CGG 0.592048 3_1:+83063529 Msa0381080:CDS
ATCCCTCTAGCCCCACGGTG+AGG 0.593165 3_1:-83057029 None:intergenic
TTTGAACTGAGTGTATCAGC+TGG 0.593405 3_1:-83057232 None:intergenic
AACAGAACACATGAAAGTCT+CGG 0.595548 3_1:-83063974 None:intergenic
CGAATCGTTACGGTCAAGGT+AGG 0.597450 3_1:+83056176 Msa0381080:CDS
AACTTCTGTACCGCGCCAAG+AGG 0.599243 3_1:-83063457 None:intergenic
GCAGATTCCTACAAGGGAGG+AGG 0.599612 3_1:+83063481 Msa0381080:CDS
TGAGGAAATCTAGAGCCGAC+AGG 0.601210 3_1:+83063050 Msa0381080:CDS
TGTTGATGCCATTCAAAGGA+GGG 0.601897 3_1:+83064333 Msa0381080:three_prime_UTR
ATGGGAAGAACCTGACAGAA+GGG 0.601920 3_1:+83062990 Msa0381080:CDS
TGAGATTGGTAAAGTTTGGG+TGG 0.606500 3_1:+83062024 Msa0381080:CDS
CATCCAAGTCTCAATCAACA+AGG 0.609027 3_1:-83064021 None:intergenic
CTCAGTTCAAAAGATCATGA+AGG 0.609132 3_1:+83057244 Msa0381080:CDS
GTTTCTGGAACAGAAGGGAG+AGG 0.609356 3_1:+83063520 Msa0381080:CDS
CCCAAGGAGGAGAAAACTGT+CGG 0.609438 3_1:-83063906 None:intergenic
AATGGGAAGAACCTGACAGA+AGG 0.610316 3_1:+83062989 Msa0381080:CDS
AGCTGTTGAGAAACTCATGT+AGG 0.610389 3_1:-83056974 None:intergenic
GATACATGGTCTTGGACGTG+GGG 0.612696 3_1:+83063426 Msa0381080:CDS
CATCGTCACTTAAATAGCAA+AGG 0.615864 3_1:-83062058 None:intergenic
ATTCAAAGGAGGGTTAGCAT+TGG 0.615871 3_1:+83064343 Msa0381080:three_prime_UTR
TCTTTCGTATAAGATAATGT+TGG 0.617780 3_1:-83064098 None:intergenic
TGACACAGTCTCTAATATTG+TGG 0.622918 3_1:+83061980 Msa0381080:CDS
AGCATTGGCTCTGGCCTCTG+GGG 0.623149 3_1:+83064358 Msa0381080:three_prime_UTR
GCTCAGAAAGAATTGATACA+TGG 0.624461 3_1:+83063412 Msa0381080:CDS
GGGCAACCTTCCTCTTGGCG+CGG 0.625389 3_1:+83063447 Msa0381080:CDS
GAAGTTGGCAGATTCCTACA+AGG 0.625676 3_1:+83063474 Msa0381080:CDS
TGGAGTAGAAGAAAGTGAAG+TGG 0.626481 3_1:+83063192 Msa0381080:CDS
TGTATGAGCCATGCTTCCCA+AGG 0.626489 3_1:-83063922 None:intergenic
CAACAATCCCTCTAGCCCCA+CGG 0.627910 3_1:-83057034 None:intergenic
TTCAGGGTGGATATTCGTTG+AGG 0.631460 3_1:+83062532 Msa0381080:intron
TTTCTGGAACAGAAGGGAGA+GGG 0.633064 3_1:+83063521 Msa0381080:CDS
TTAGGAACGAATTTCATCTG+TGG 0.633485 3_1:-83056235 None:intergenic
AATACTTGGATCAGGCCTGT+CGG 0.634432 3_1:-83063065 None:intergenic
GTGGACTTGGCTTGTAACTG+TGG 0.636167 3_1:-83062851 None:intergenic
AATTAGCGAATCATGCAACC+TGG 0.636551 3_1:-83061910 None:intergenic
GTCCAAATAACAGAGGGAGA+GGG 0.637429 3_1:+83063650 Msa0381080:CDS
ATATATAAAATAAAACAGGT+TGG 0.638331 3_1:+83064243 Msa0381080:three_prime_UTR
GCTAAATTATCATGTAACCA+AGG 0.640792 3_1:-83059635 None:intergenic
TGGTATGATTTCCCTCACCG+TGG 0.642009 3_1:+83057017 Msa0381080:CDS
TGATGATGTTTCTGAAGTGG+AGG 0.644476 3_1:+83063615 Msa0381080:CDS
TCAACAGTCAAAATGAGTTG+AGG 0.646683 3_1:-83064316 None:intergenic
GATCAAGGTCCAAATAACAG+AGG 0.648323 3_1:+83063643 Msa0381080:CDS
TCAGGTAGGGTTCAACCGGG+GGG 0.651485 3_1:+83056343 Msa0381080:CDS
CTATGACCACAATCCAGAAG+AGG 0.655302 3_1:+83062757 Msa0381080:CDS
AACGCCTCTAATACAAAATG+GGG 0.658920 3_1:+83063280 Msa0381080:CDS
CCATCTTTGACATAGTACTG+TGG 0.659242 3_1:-83063316 None:intergenic
TAATTCCGTCCATGCAAAAG+GGG 0.660109 3_1:+83061928 Msa0381080:CDS
TTTGAAGGAGACTATTAACA+GGG 0.660401 3_1:+83062592 Msa0381080:CDS
ATGAGCCATGCTTCCCAAGG+AGG 0.666773 3_1:-83063919 None:intergenic
ATCAATCAGACGTATAGACA+TGG 0.675680 3_1:+83063861 Msa0381080:three_prime_UTR
TCCTATGACTTCGACCCCAG+AGG 0.677119 3_1:-83064372 None:intergenic
GTATGATTTCCCTCACCGTG+GGG 0.678147 3_1:+83057019 Msa0381080:CDS
AGAAATACCTCATCTCAACA+GGG 0.678853 3_1:-83061650 None:intergenic
TAGAAACAACCATTACAGGA+AGG 0.681684 3_1:+83063696 Msa0381080:CDS
AAGTTGGCAGATTCCTACAA+GGG 0.684550 3_1:+83063475 Msa0381080:CDS
TTGGCAGATTCCTACAAGGG+AGG 0.685644 3_1:+83063478 Msa0381080:CDS
TATACTAATTGATTCTACGT+CGG 0.693386 3_1:+83062943 Msa0381080:CDS
GATGATGTTTCTGAAGTGGA+GGG 0.699043 3_1:+83063616 Msa0381080:CDS
GAAATACCTCATCTCAACAG+GGG 0.699731 3_1:-83061649 None:intergenic
ATACATGGTCTTGGACGTGG+GGG 0.701593 3_1:+83063427 Msa0381080:CDS
TCCATGTTTCTGGAACAGAA+GGG 0.702506 3_1:+83063515 Msa0381080:CDS
ACAATATCATGAAAACACGA+CGG 0.757457 3_1:-83057088 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTCTCAAATTATTAT+CGG + chr3_1:83056633-83056652 Msa0381080:intron 10.0%
!! AATAAGAAAATTAAGTAATA+GGG - chr3_1:83057529-83057548 None:intergenic 10.0%
!! AAATAAGAAAATTAAGTAAT+AGG - chr3_1:83057530-83057549 None:intergenic 10.0%
!! AAAAGAAAATAAGAAATATA+AGG - chr3_1:83058048-83058067 None:intergenic 10.0%
!!! TTTTTTCATTAACATAAAAT+GGG + chr3_1:83059035-83059054 Msa0381080:intron 10.0%
!!! TTTGATTTCAATATTTTTTT+TGG + chr3_1:83059351-83059370 Msa0381080:intron 10.0%
!! GAATAATAAAATAGAAATAA+TGG + chr3_1:83060040-83060059 Msa0381080:intron 10.0%
!!! AAATTCATAATTTTCATTTT+GGG + chr3_1:83060722-83060741 Msa0381080:intron 10.0%
!! AGATATATATAAAATAAAAC+AGG + chr3_1:83064239-83064258 Msa0381080:three_prime_UTR 10.0%
!! AAAACTCATAGTAATATAAA+TGG - chr3_1:83058131-83058150 None:intergenic 15.0%
!! AATATTCTTAAAAATGTGTT+TGG + chr3_1:83058376-83058395 Msa0381080:intron 15.0%
!! ATATTCTTAAAAATGTGTTT+GGG + chr3_1:83058377-83058396 Msa0381080:intron 15.0%
!!! AAAATCCTTTATTTTGTTTT+TGG + chr3_1:83058722-83058741 Msa0381080:intron 15.0%
!! AAGAATTATTTAGAAACTAA+AGG + chr3_1:83058777-83058796 Msa0381080:intron 15.0%
!! TATATTGTACCAAATATATT+TGG - chr3_1:83059002-83059021 None:intergenic 15.0%
!!! CATTTTATGTTAATGAAAAA+AGG - chr3_1:83059036-83059055 None:intergenic 15.0%
!!! CTTTTTTCATTAACATAAAA+TGG + chr3_1:83059034-83059053 Msa0381080:intron 15.0%
!! AATAATATCATAAATTCCAT+TGG - chr3_1:83059275-83059294 None:intergenic 15.0%
!! ATGGAATTTATGATATTATT+TGG + chr3_1:83059275-83059294 Msa0381080:intron 15.0%
!! ATAGTTAAATTATGGTATAA+AGG + chr3_1:83060684-83060703 Msa0381080:intron 15.0%
!!! CAAATTCATAATTTTCATTT+TGG + chr3_1:83060721-83060740 Msa0381080:intron 15.0%
!!! AATTCATAATTTTCATTTTG+GGG + chr3_1:83060723-83060742 Msa0381080:intron 15.0%
!! ATCTTTATAACTTTAGATAT+GGG + chr3_1:83061862-83061881 Msa0381080:intron 15.0%
!! AACAACTTAAATATATATCT+GGG + chr3_1:83062558-83062577 Msa0381080:CDS 15.0%
!!! TTTTAAAACAAATTTTATGC+AGG + chr3_1:83063831-83063850 Msa0381080:three_prime_UTR 15.0%
!! ATATATAAAATAAAACAGGT+TGG + chr3_1:83064243-83064262 Msa0381080:three_prime_UTR 15.0%
!!! TGAAGAATTTTAACAAACAT+TGG - chr3_1:83056820-83056839 None:intergenic 20.0%
!! AATGTAAGTTTCTAATAAGT+TGG + chr3_1:83057115-83057134 Msa0381080:intron 20.0%
!! TAAAAACCATACAAGATTAA+AGG - chr3_1:83057166-83057185 None:intergenic 20.0%
!!! GATAGAATAAACCTTTTTAT+GGG - chr3_1:83057896-83057915 None:intergenic 20.0%
!! CATAAAAAGGTTTATTCTAT+CGG + chr3_1:83057895-83057914 Msa0381080:intron 20.0%
!! GAAAAAATAATGTTGTTCAT+GGG - chr3_1:83057948-83057967 None:intergenic 20.0%
!! AGAAAAAATAATGTTGTTCA+TGG - chr3_1:83057949-83057968 None:intergenic 20.0%
!! AAATCTCATAGTAATGTAAA+TGG - chr3_1:83058181-83058200 None:intergenic 20.0%
!! TTACATTACTATGAGATTTA+TGG + chr3_1:83058182-83058201 Msa0381080:intron 20.0%
!!! TTTTATTGAATCTTAATCTC+TGG - chr3_1:83059061-83059080 None:intergenic 20.0%
!!! CTTTATTTGTATACAAAAAC+TGG + chr3_1:83059216-83059235 Msa0381080:intron 20.0%
!! AATAAATCTTTCTAATCACT+TGG - chr3_1:83059454-83059473 None:intergenic 20.0%
!! AAATGTGATATTTCCATAAT+TGG + chr3_1:83059749-83059768 Msa0381080:intron 20.0%
!! ATAATTTATATGTTCAGCTT+TGG + chr3_1:83059903-83059922 Msa0381080:intron 20.0%
!!! TTCTATTTTATTATTCTGCT+TGG - chr3_1:83060036-83060055 None:intergenic 20.0%
!! TGTAAATTCTAACAATAAAG+GGG - chr3_1:83060208-83060227 None:intergenic 20.0%
!! GTGTAAATTCTAACAATAAA+GGG - chr3_1:83060209-83060228 None:intergenic 20.0%
!! AGTGTAAATTCTAACAATAA+AGG - chr3_1:83060210-83060229 None:intergenic 20.0%
!! ACACTTTCAATAAAAGAATT+AGG + chr3_1:83060225-83060244 Msa0381080:intron 20.0%
!!! AGACCAAAAATTAAGATTTT+GGG - chr3_1:83060435-83060454 None:intergenic 20.0%
!!! AAGACCAAAAATTAAGATTT+TGG - chr3_1:83060436-83060455 None:intergenic 20.0%
!! TTAACATGTCAAATAATGTA+TGG - chr3_1:83060595-83060614 None:intergenic 20.0%
!! TTATGTGCATAGTTAAATTA+TGG + chr3_1:83060676-83060695 Msa0381080:intron 20.0%
!! GTATAAAGGAAAAATTTGTA+AGG + chr3_1:83060698-83060717 Msa0381080:intron 20.0%
!!! TTTTTAGTAAAGTAGCATTA+TGG - chr3_1:83060788-83060807 None:intergenic 20.0%
!! AGTAAATTTCTACAAAAGTA+TGG + chr3_1:83061716-83061735 Msa0381080:intron 20.0%
!! TAAATCTGTTAACATATGAA+AGG - chr3_1:83061762-83061781 None:intergenic 20.0%
!! GATCTTTATAACTTTAGATA+TGG + chr3_1:83061861-83061880 Msa0381080:intron 20.0%
!!! AATTTAAAGTATTAGTTGAG+TGG - chr3_1:83062462-83062481 None:intergenic 20.0%
!! GAACAACTTAAATATATATC+TGG + chr3_1:83062557-83062576 Msa0381080:CDS 20.0%
!!! ATTAGAAACTTTTGTATTTG+AGG - chr3_1:83062972-83062991 None:intergenic 20.0%
!! TCAAATACAAAAGTTTCTAA+TGG + chr3_1:83062971-83062990 Msa0381080:CDS 20.0%
!! CAAATACAAAAGTTTCTAAT+GGG + chr3_1:83062972-83062991 Msa0381080:CDS 20.0%
!! ATTAAAGTTAAAGGAAATGT+AGG - chr3_1:83064209-83064228 None:intergenic 20.0%
!! CAACTAAACATTAAAGTTAA+AGG - chr3_1:83064218-83064237 None:intergenic 20.0%
!! GAACTATAAACACAGTTTTT+GGG - chr3_1:83056114-83056133 None:intergenic 25.0%
!! AGAACTATAAACACAGTTTT+TGG - chr3_1:83056115-83056134 None:intergenic 25.0%
! AGACAATTACAACAACAATA+AGG + chr3_1:83056201-83056220 Msa0381080:CDS 25.0%
! GACAATTACAACAACAATAA+GGG + chr3_1:83056202-83056221 Msa0381080:CDS 25.0%
!!! TTGTTGTTGTTTTTCTCTTA+GGG - chr3_1:83056287-83056306 None:intergenic 25.0%
!!! TTTGTTGTTGTTTTTCTCTT+AGG - chr3_1:83056288-83056307 None:intergenic 25.0%
! TTGGAAATATTTGTTCACAT+TGG + chr3_1:83056865-83056884 Msa0381080:intron 25.0%
!! TGTTTTCCTTTAATCTTGTA+TGG + chr3_1:83057157-83057176 Msa0381080:intron 25.0%
!!! AATCTTGTATGGTTTTTAAG+TGG + chr3_1:83057168-83057187 Msa0381080:intron 25.0%
!! CGATAGAATAAACCTTTTTA+TGG - chr3_1:83057897-83057916 None:intergenic 25.0%
! TTGTGTAACTATGTTTAATC+TGG + chr3_1:83058072-83058091 Msa0381080:intron 25.0%
! AATACAATAAACTAGATCGA+TGG - chr3_1:83058221-83058240 None:intergenic 25.0%
! GTATTTGTGTATTTGCATTA+TGG + chr3_1:83058236-83058255 Msa0381080:intron 25.0%
! AATAATTCTTCTTAGAAGCT+AGG - chr3_1:83058767-83058786 None:intergenic 25.0%
!!! AAATGTTTTTGGGTCTATTA+TGG - chr3_1:83058914-83058933 None:intergenic 25.0%
!! ATGTTGCTTCCAAATATATT+TGG + chr3_1:83058990-83059009 Msa0381080:intron 25.0%
!! TGTTAAAATCACCTTTTTCT+CGG + chr3_1:83059096-83059115 Msa0381080:intron 25.0%
! AAAGAAACAAAATAAAGCAG+CGG - chr3_1:83059326-83059345 None:intergenic 25.0%
! AAAAAGATCATGTTACTGTA+TGG + chr3_1:83059396-83059415 Msa0381080:intron 25.0%
! ATAAATAAGAAACGTAAGGA+AGG - chr3_1:83059579-83059598 None:intergenic 25.0%
! GTGAATAAATAAGAAACGTA+AGG - chr3_1:83059583-83059602 None:intergenic 25.0%
!! TCTTATTTATTCACTCTTTC+AGG + chr3_1:83059589-83059608 Msa0381080:intron 25.0%
!! ATTTACACTTTGGAAATTAC+TGG - chr3_1:83059733-83059752 None:intergenic 25.0%
! GAAATATCACATTTACACTT+TGG - chr3_1:83059743-83059762 None:intergenic 25.0%
!! AGAAAATGATTAGCCAATTA+TGG - chr3_1:83059765-83059784 None:intergenic 25.0%
! ACTTATGCATAATTACTTGA+TGG + chr3_1:83059954-83059973 Msa0381080:intron 25.0%
! CTTATGCATAATTACTTGAT+GGG + chr3_1:83059955-83059974 Msa0381080:intron 25.0%
!!! AAATGAAAGTATTGGTATGT+TGG - chr3_1:83059988-83060007 None:intergenic 25.0%
! TACCAATACTTTCATTTGTT+TGG + chr3_1:83059991-83060010 Msa0381080:intron 25.0%
! ACCAATACTTTCATTTGTTT+GGG + chr3_1:83059992-83060011 Msa0381080:intron 25.0%
!! ATGCCCAAAATCTTAATTTT+TGG + chr3_1:83060429-83060448 Msa0381080:intron 25.0%
! TTAGATGCTATGTTATTCAA+AGG - chr3_1:83060477-83060496 None:intergenic 25.0%
! TTTACTAAAAACTGATCTTC+TGG + chr3_1:83060797-83060816 Msa0381080:CDS 25.0%
! TAGTATGCTGCATAAATTAA+TGG - chr3_1:83060989-83061008 None:intergenic 25.0%
! TCAAAGAATTTCATGAATCA+AGG - chr3_1:83061504-83061523 None:intergenic 25.0%
!!! GTCATCTATTTTTGTGATAT+AGG + chr3_1:83061545-83061564 Msa0381080:intron 25.0%
!!! TATTTTTGTGATATAGGTGA+TGG + chr3_1:83061551-83061570 Msa0381080:intron 25.0%
! TATTTCTTACCATTGAAACT+TGG + chr3_1:83061666-83061685 Msa0381080:intron 25.0%
! ATTTCTTACCATTGAAACTT+GGG + chr3_1:83061667-83061686 Msa0381080:intron 25.0%
! GCTACACTTATTATGATTAT+TGG + chr3_1:83062351-83062370 Msa0381080:intron 25.0%
! TTTAAATTAAAGGTGGAATC+AGG + chr3_1:83062427-83062446 Msa0381080:intron 25.0%
! AGTCAAAAATCAGTCAAATT+AGG + chr3_1:83062684-83062703 Msa0381080:CDS 25.0%
! GTCAAAAATCAGTCAAATTA+GGG + chr3_1:83062685-83062704 Msa0381080:CDS 25.0%
!! GTCATTCAAAGAATTTTAGA+AGG + chr3_1:83062779-83062798 Msa0381080:CDS 25.0%
!! TATACTAATTGATTCTACGT+CGG + chr3_1:83062943-83062962 Msa0381080:CDS 25.0%
! TCATTATTGTCCAAAATACT+TGG - chr3_1:83063082-83063101 None:intergenic 25.0%
! TGACGAAATGAATGAAAAAT+CGG + chr3_1:83063219-83063238 Msa0381080:CDS 25.0%
! TATTGAACATAATCAACATC+AGG + chr3_1:83063582-83063601 Msa0381080:CDS 25.0%
! TAGTAAGAAATGTATGTTGA+TGG - chr3_1:83063771-83063790 None:intergenic 25.0%
! TCTTTCGTATAAGATAATGT+TGG - chr3_1:83064101-83064120 None:intergenic 25.0%
! AAGAGTTTAATGTCTTGTAA+AGG + chr3_1:83064117-83064136 Msa0381080:three_prime_UTR 25.0%
!! AGTTGAGAAGCATTTGTATA+CGG + chr3_1:83056079-83056098 Msa0381080:five_prime_UTR 30.0%
!!! ATAAACACAGTTTTTGGGAT+GGG - chr3_1:83056109-83056128 None:intergenic 30.0%
!! TATAAACACAGTTTTTGGGA+TGG - chr3_1:83056110-83056129 None:intergenic 30.0%
AGAGAAAAACAACAACAAAC+TGG + chr3_1:83056289-83056308 Msa0381080:CDS 30.0%
!! AACAACTTTCTGAGATTCAA+GGG - chr3_1:83056452-83056471 None:intergenic 30.0%
! AGTTGAAACCCAAAGATTTT+TGG + chr3_1:83056506-83056525 Msa0381080:CDS 30.0%
TAAAATTCTTCATCGATGCA+TGG + chr3_1:83056828-83056847 Msa0381080:intron 30.0%
!! TGTTGTTGTTGTTGTTTGTT+TGG + chr3_1:83056922-83056941 Msa0381080:intron 30.0%
TGTTTGGATTGTATTTGTAG+TGG + chr3_1:83056938-83056957 Msa0381080:intron 30.0%
!!! ATTGTTGCTGGTGTTATTTT+TGG + chr3_1:83057050-83057069 Msa0381080:CDS 30.0%
ACAATATCATGAAAACACGA+CGG - chr3_1:83057091-83057110 None:intergenic 30.0%
! TTTAAGTGGAATTTGTTTGC+AGG + chr3_1:83057182-83057201 Msa0381080:intron 30.0%
ACTGTCCACAAACTATAAAA+GGG - chr3_1:83057284-83057303 None:intergenic 30.0%
AAGTAATAGGGCAACTATAT+CGG - chr3_1:83057517-83057536 None:intergenic 30.0%
! ACCATCTAGAATATATGTTG+TGG + chr3_1:83057661-83057680 Msa0381080:intron 30.0%
TCCACAACATATATTCTAGA+TGG - chr3_1:83057665-83057684 None:intergenic 30.0%
TATATGTTGTGGATTTCGAA+TGG + chr3_1:83057672-83057691 Msa0381080:intron 30.0%
TTTCTGCAATGTTTATCTGA+TGG + chr3_1:83057821-83057840 Msa0381080:intron 30.0%
!!! ATCTGATGGATTTTTTTAGC+TGG + chr3_1:83057835-83057854 Msa0381080:intron 30.0%
ATAATGTTGTTCATGGGAAA+TGG - chr3_1:83057942-83057961 None:intergenic 30.0%
AGAGAACAATCATCTGAAAA+AGG - chr3_1:83057973-83057992 None:intergenic 30.0%
! ATTGCCTCATTTTGTATTCT+CGG + chr3_1:83058503-83058522 Msa0381080:intron 30.0%
GCACATATATCAAACAACTT+TGG - chr3_1:83058594-83058613 None:intergenic 30.0%
! TGCATTTTCATGACTGTATA+TGG - chr3_1:83058616-83058635 None:intergenic 30.0%
! GTGAGAACTTTTTACTATTG+TGG + chr3_1:83058654-83058673 Msa0381080:intron 30.0%
GGATGCCAAAAACAAAATAA+AGG - chr3_1:83058730-83058749 None:intergenic 30.0%
AGCTAGGTTTATTGAAACTA+AGG - chr3_1:83058751-83058770 None:intergenic 30.0%
! CTTCCAAAGGAAATGTTTTT+GGG - chr3_1:83058924-83058943 None:intergenic 30.0%
! TCTTCCAAAGGAAATGTTTT+TGG - chr3_1:83058925-83058944 None:intergenic 30.0%
TAAAAGATAGCTTCTTCCAA+AGG - chr3_1:83058937-83058956 None:intergenic 30.0%
! TTAATCTATCGACTATCATG+TGG + chr3_1:83058965-83058984 Msa0381080:intron 30.0%
! TAATCTATCGACTATCATGT+GGG + chr3_1:83058966-83058985 Msa0381080:intron 30.0%
GCTAAATTATCATGTAACCA+AGG - chr3_1:83059638-83059657 None:intergenic 30.0%
! TGCAGTAACATCTCATTTTA+TGG + chr3_1:83059658-83059677 Msa0381080:CDS 30.0%
! TGAGTTTTTGTACTGTCTTT+TGG + chr3_1:83059794-83059813 Msa0381080:intron 30.0%
! ACCCAAACAAATGAAAGTAT+TGG - chr3_1:83059996-83060015 None:intergenic 30.0%
AAGCAAGCAAATCAAAATTG+TGG - chr3_1:83060130-83060149 None:intergenic 30.0%
ATATTACTTCGCCAACATTT+GGG + chr3_1:83060314-83060333 Msa0381080:intron 30.0%
CTGACTGCTTCTTTATTATA+TGG + chr3_1:83060402-83060421 Msa0381080:intron 30.0%
ATGCACAGAAGAAAATTATC+AGG - chr3_1:83060515-83060534 None:intergenic 30.0%
TATGGACATGACAGAAAAAA+TGG - chr3_1:83060577-83060596 None:intergenic 30.0%
TGAACAACTCACTTTCAAAA+AGG - chr3_1:83060844-83060863 None:intergenic 30.0%
AATTAGAAGCTTCTCATATC+TGG - chr3_1:83060963-83060982 None:intergenic 30.0%
TATGCTGCATAAATTAATGG+TGG - chr3_1:83060986-83061005 None:intergenic 30.0%
TCAACAATTCATTTCCAAAC+TGG + chr3_1:83061100-83061119 Msa0381080:intron 30.0%
! TTCTTTCTTATTTAACGTCC+AGG - chr3_1:83061244-83061263 None:intergenic 30.0%
AAAGAATAGCCACGAATAAA+CGG + chr3_1:83061258-83061277 Msa0381080:intron 30.0%
AAATGATGCAATTGTGTCAA+TGG + chr3_1:83061581-83061600 Msa0381080:CDS 30.0%
CATAAAAACCCAAGTTTCAA+TGG - chr3_1:83061678-83061697 None:intergenic 30.0%
TAACTTTAGATATGGGAATG+AGG + chr3_1:83061869-83061888 Msa0381080:intron 30.0%
GAAGATGTTAAGAATGAGAT+TGG + chr3_1:83062010-83062029 Msa0381080:CDS 30.0%
AGAATGAGATTGGTAAAGTT+TGG + chr3_1:83062020-83062039 Msa0381080:CDS 30.0%
GAATGAGATTGGTAAAGTTT+GGG + chr3_1:83062021-83062040 Msa0381080:CDS 30.0%
TACAGTATCATTAAGTTTCC+AGG + chr3_1:83062190-83062209 Msa0381080:CDS 30.0%
GAAGAAATGTTTCCTTCTTA+TGG - chr3_1:83062220-83062239 None:intergenic 30.0%
AAGAAGGAAACATTTCTTCA+AGG + chr3_1:83062221-83062240 Msa0381080:CDS 30.0%
GGAATTTCAATATATCAAGC+AGG + chr3_1:83062252-83062271 Msa0381080:CDS 30.0%
AATATATCAAGCAGGATTGA+GGG + chr3_1:83062260-83062279 Msa0381080:CDS 30.0%
TATTGGCAAAAAACTTGATC+TGG + chr3_1:83062368-83062387 Msa0381080:intron 30.0%
ATCTGGTGAAATTCTTTAGA+GGG + chr3_1:83062385-83062404 Msa0381080:intron 30.0%
TGTTCCGCTGTTTAAATTAA+AGG + chr3_1:83062417-83062436 Msa0381080:intron 30.0%
! TCCACCTTTAATTTAAACAG+CGG - chr3_1:83062424-83062443 None:intergenic 30.0%
TTTGAAGGAGACTATTAACA+GGG + chr3_1:83062592-83062611 Msa0381080:CDS 30.0%
! TTACGGTAAAGGGTTTTTAT+CGG + chr3_1:83062721-83062740 Msa0381080:CDS 30.0%
GACGAAATGAATGAAAAATC+GGG + chr3_1:83063220-83063239 Msa0381080:CDS 30.0%
ACGAAATGAATGAAAAATCG+GGG + chr3_1:83063221-83063240 Msa0381080:CDS 30.0%
!!! ATTTTGTATTAGAGGCGTTT+TGG - chr3_1:83063279-83063298 None:intergenic 30.0%
AAAACGCCTCTAATACAAAA+TGG + chr3_1:83063278-83063297 Msa0381080:CDS 30.0%
AAACGCCTCTAATACAAAAT+GGG + chr3_1:83063279-83063298 Msa0381080:CDS 30.0%
AAAGAATTGATACATGGTCT+TGG + chr3_1:83063418-83063437 Msa0381080:CDS 30.0%
! TGGATTGAGTGGTTTTTAAT+AGG + chr3_1:83063744-83063763 Msa0381080:exon 30.0%
! ACTTTCATGTGTTCTGTTTT+GGG + chr3_1:83063979-83063998 Msa0381080:three_prime_UTR 30.0%
TTGTAAAGGTTACTTCATAC+CGG + chr3_1:83064131-83064150 Msa0381080:three_prime_UTR 30.0%
CAAAACTAGATAACCAAAAC+TGG - chr3_1:83064160-83064179 None:intergenic 30.0%
!!! CAGTTTTGGTTATCTAGTTT+TGG + chr3_1:83064158-83064177 Msa0381080:three_prime_UTR 30.0%
TATGCTCCCAGATTAAAATT+GGG + chr3_1:83064277-83064296 Msa0381080:three_prime_UTR 30.0%
! AAATGCTTCTCAACTGACTT+AGG - chr3_1:83056074-83056093 None:intergenic 35.0%
CAGAAAATGTCGAATCGTTA+CGG + chr3_1:83056166-83056185 Msa0381080:exon 35.0%
TTAGGAACGAATTTCATCTG+TGG - chr3_1:83056238-83056257 None:intergenic 35.0%
! AAACAACAACAAACTGGTTC+TGG + chr3_1:83056295-83056314 Msa0381080:CDS 35.0%
!! CAACAACTTTCTGAGATTCA+AGG - chr3_1:83056453-83056472 None:intergenic 35.0%
CCTTGTGACCAAAAATCTTT+GGG - chr3_1:83056517-83056536 None:intergenic 35.0%
ACCTTGTGACCAAAAATCTT+TGG - chr3_1:83056518-83056537 None:intergenic 35.0%
TCAACAGCTTTCTGCAATTT+AGG + chr3_1:83056988-83057007 Msa0381080:CDS 35.0%
CTCAGTTCAAAAGATCATGA+AGG + chr3_1:83057244-83057263 Msa0381080:CDS 35.0%
AGTTCAAAAGATCATGAAGG+TGG + chr3_1:83057247-83057266 Msa0381080:intron 35.0%
GTTCAAAAGATCATGAAGGT+GGG + chr3_1:83057248-83057267 Msa0381080:intron 35.0%
CACTGTCCACAAACTATAAA+AGG - chr3_1:83057285-83057304 None:intergenic 35.0%
AATCGCGTAAAAATCACGTA+TGG - chr3_1:83057329-83057348 None:intergenic 35.0%
TGAAAGTCAGGGTAAAGAAA+TGG + chr3_1:83057753-83057772 Msa0381080:intron 35.0%
TGATAACACTGCCCATAAAA+AGG + chr3_1:83057882-83057901 Msa0381080:intron 35.0%
! CAGATGATTGTTCTCTTTTC+TGG + chr3_1:83057977-83057996 Msa0381080:intron 35.0%
! CTATGTTTAATCTGGTGTCA+TGG + chr3_1:83058080-83058099 Msa0381080:intron 35.0%
ATCAGCTGTACTCTTTATAG+CGG + chr3_1:83058290-83058309 Msa0381080:intron 35.0%
CATGTGAGCAATGTTATTGA+TGG - chr3_1:83058346-83058365 None:intergenic 35.0%
ATAACATTGCTCACATGCAA+TGG + chr3_1:83058349-83058368 Msa0381080:intron 35.0%
AACACCGAGAATACAAAATG+AGG - chr3_1:83058510-83058529 None:intergenic 35.0%
! ATTGCATGTAGTTCTTTTGC+AGG + chr3_1:83058548-83058567 Msa0381080:intron 35.0%
TCCTACAAGCAACAGAAAAA+AGG + chr3_1:83058863-83058882 Msa0381080:intron 35.0%
!!! ACCTTTTTTCTGTTGCTTGT+AGG - chr3_1:83058867-83058886 None:intergenic 35.0%
ATTTCTGTTACTCCATTGAC+AGG + chr3_1:83058887-83058906 Msa0381080:intron 35.0%
AGACCCAAAAACATTTCCTT+TGG + chr3_1:83058918-83058937 Msa0381080:intron 35.0%
!! GAAAACAAGTACCGAGAAAA+AGG - chr3_1:83059110-83059129 None:intergenic 35.0%
CTTTCTTAGTCATTGTCCAA+TGG + chr3_1:83059256-83059275 Msa0381080:intron 35.0%
CACATTTGTATGTTTGTGAC+CGG + chr3_1:83060069-83060088 Msa0381080:intron 35.0%
AAAGGGAGGGAAATGAAAAT+AGG + chr3_1:83060274-83060293 Msa0381080:intron 35.0%
AGGGAAATGAAAATAGGAAC+TGG + chr3_1:83060280-83060299 Msa0381080:intron 35.0%
GGGAAATGAAAATAGGAACT+GGG + chr3_1:83060281-83060300 Msa0381080:intron 35.0%
GGAAATGAAAATAGGAACTG+GGG + chr3_1:83060282-83060301 Msa0381080:intron 35.0%
CATATTACTTCGCCAACATT+TGG + chr3_1:83060313-83060332 Msa0381080:intron 35.0%
TATTACTTCGCCAACATTTG+GGG + chr3_1:83060315-83060334 Msa0381080:intron 35.0%
CAGACACATTATTTGTCAAC+AGG - chr3_1:83060551-83060570 None:intergenic 35.0%
!!! TTCATTTTGGGGTTATGTAC+AGG + chr3_1:83060734-83060753 Msa0381080:intron 35.0%
ACTAAAAACTGATCTTCTGG+AGG + chr3_1:83060800-83060819 Msa0381080:CDS 35.0%
AGTGAGTTGTTCAATCTTCT+TGG + chr3_1:83060851-83060870 Msa0381080:intron 35.0%
GTGAGTTGTTCAATCTTCTT+GGG + chr3_1:83060852-83060871 Msa0381080:intron 35.0%
TGAGTTGTTCAATCTTCTTG+GGG + chr3_1:83060853-83060872 Msa0381080:intron 35.0%
TTGAGGTAACATTAAGGAGA+AGG - chr3_1:83061160-83061179 None:intergenic 35.0%
AGATGTAATGTAGTTAAGCC+TGG + chr3_1:83061223-83061242 Msa0381080:intron 35.0%
! AATCTGATGGTGTGGAAATA+GGG - chr3_1:83061335-83061354 None:intergenic 35.0%
TGTTGTCTATGACAATCTGA+TGG - chr3_1:83061348-83061367 None:intergenic 35.0%
TTTGAAGAAGAATTTCGCTG+TGG + chr3_1:83061399-83061418 Msa0381080:intron 35.0%
AGAAATACCTCATCTCAACA+GGG - chr3_1:83061653-83061672 None:intergenic 35.0%
AAGAAATACCTCATCTCAAC+AGG - chr3_1:83061654-83061673 None:intergenic 35.0%
TGGCTAAGCTGACAAAAAAT+TGG + chr3_1:83061736-83061755 Msa0381080:intron 35.0%
GTTTGCCAGCAAAAATGATA+TGG - chr3_1:83061956-83061975 None:intergenic 35.0%
TGACACAGTCTCTAATATTG+TGG + chr3_1:83061980-83061999 Msa0381080:CDS 35.0%
CATCGTCACTTAAATAGCAA+AGG - chr3_1:83062061-83062080 None:intergenic 35.0%
TTTCCAGGAAATCCATAAGA+AGG + chr3_1:83062205-83062224 Msa0381080:CDS 35.0%
TTTCCTTCTTATGGATTTCC+TGG - chr3_1:83062211-83062230 None:intergenic 35.0%
!! CATTTCTTCAAGGTGTTGAA+AGG + chr3_1:83062231-83062250 Msa0381080:CDS 35.0%
CAATATATCAAGCAGGATTG+AGG + chr3_1:83062259-83062278 Msa0381080:CDS 35.0%
ATTGAGGGATTACAGCATAA+TGG + chr3_1:83062275-83062294 Msa0381080:CDS 35.0%
GATCTGGTGAAATTCTTTAG+AGG + chr3_1:83062384-83062403 Msa0381080:intron 35.0%
TCCGCTGTTTAAATTAAAGG+TGG + chr3_1:83062420-83062439 Msa0381080:intron 35.0%
! TAATCTAGTTCCTCTGATTC+AGG + chr3_1:83062515-83062534 Msa0381080:intron 35.0%
! AATCTAGTTCCTCTGATTCA+GGG + chr3_1:83062516-83062535 Msa0381080:intron 35.0%
!!! TGGGATTTTGAGTTCTTTGA+AGG + chr3_1:83062577-83062596 Msa0381080:CDS 35.0%
! CTTTGAAGGAGACTATTAAC+AGG + chr3_1:83062591-83062610 Msa0381080:CDS 35.0%
ACAGAGATCTTTGCAGAATA+TGG - chr3_1:83062620-83062639 None:intergenic 35.0%
TATTCCCTGATTACGGTAAA+GGG + chr3_1:83062711-83062730 Msa0381080:CDS 35.0%
AAAACCCTTTACCGTAATCA+GGG - chr3_1:83062718-83062737 None:intergenic 35.0%
AAAAACCCTTTACCGTAATC+AGG - chr3_1:83062719-83062738 None:intergenic 35.0%
ATTCTTTGAATGACCTCTTC+TGG - chr3_1:83062773-83062792 None:intergenic 35.0%
! TCATAATGATCTGAAGTGCT+TGG + chr3_1:83062808-83062827 Msa0381080:CDS 35.0%
CTTGGATACTTCATTAGAGA+CGG + chr3_1:83062826-83062845 Msa0381080:CDS 35.0%
GGTGTACTAATTGATGTTAG+CGG + chr3_1:83062902-83062921 Msa0381080:CDS 35.0%
GTGTACTAATTGATGTTAGC+GGG + chr3_1:83062903-83062922 Msa0381080:CDS 35.0%
! TTCCTCACAAATTTTCCAAG+TGG - chr3_1:83063037-83063056 None:intergenic 35.0%
TTGTCCAAAATACTTGGATC+AGG - chr3_1:83063076-83063095 None:intergenic 35.0%
!! TGATGACTCTTTTGATGACT+TGG + chr3_1:83063150-83063169 Msa0381080:CDS 35.0%
!! GATGACTCTTTTGATGACTT+GGG + chr3_1:83063151-83063170 Msa0381080:CDS 35.0%
ATGAAAAATCGGGGAAATCA+AGG + chr3_1:83063230-83063249 Msa0381080:CDS 35.0%
TGAAAAATCGGGGAAATCAA+GGG + chr3_1:83063231-83063250 Msa0381080:CDS 35.0%
AACGCCTCTAATACAAAATG+GGG + chr3_1:83063280-83063299 Msa0381080:CDS 35.0%
! AATTACAGCTACAAAGTGTC+TGG + chr3_1:83063343-83063362 Msa0381080:CDS 35.0%
GCTCAGAAAGAATTGATACA+TGG + chr3_1:83063412-83063431 Msa0381080:CDS 35.0%
! ATCTGATGATGTTTCTGAAG+TGG + chr3_1:83063612-83063631 Msa0381080:CDS 35.0%
ATCAAGGTCCAAATAACAGA+GGG + chr3_1:83063644-83063663 Msa0381080:CDS 35.0%
TAGAAACAACCATTACAGGA+AGG + chr3_1:83063696-83063715 Msa0381080:CDS 35.0%
GAAACTAGCCAGAGTTATAT+GGG - chr3_1:83063801-83063820 None:intergenic 35.0%
TGAAACTAGCCAGAGTTATA+TGG - chr3_1:83063802-83063821 None:intergenic 35.0%
ATCAATCAGACGTATAGACA+TGG + chr3_1:83063861-83063880 Msa0381080:three_prime_UTR 35.0%
TTGACTGGTAAAGTCTACTA+TGG + chr3_1:83063945-83063964 Msa0381080:three_prime_UTR 35.0%
AACAGAACACATGAAAGTCT+CGG - chr3_1:83063977-83063996 None:intergenic 35.0%
! GACTTTCATGTGTTCTGTTT+TGG + chr3_1:83063978-83063997 Msa0381080:three_prime_UTR 35.0%
AGATAACCAAAACTGGATTC+CGG - chr3_1:83064153-83064172 None:intergenic 35.0%
CTATGCTCCCAGATTAAAAT+TGG + chr3_1:83064276-83064295 Msa0381080:three_prime_UTR 35.0%
!! ACTACGCCCAATTTTAATCT+GGG - chr3_1:83064286-83064305 None:intergenic 35.0%
!! AACTACGCCCAATTTTAATC+TGG - chr3_1:83064287-83064306 None:intergenic 35.0%
TCAACAGTCAAAATGAGTTG+AGG - chr3_1:83064319-83064338 None:intergenic 35.0%
TACCCTACTTAGTGGAATAA+GGG + chr3_1:83064427-83064446 Msa0381080:intron 35.0%
TTCCCTTATTCCACTAAGTA+GGG - chr3_1:83064432-83064451 None:intergenic 35.0%
ATTCCCTTATTCCACTAAGT+AGG - chr3_1:83064433-83064452 None:intergenic 35.0%
! AAGGTTGGGGTCGAATTTTT+AGG - chr3_1:83056256-83056275 None:intergenic 40.0%
TTAGGGAAGTTGACAAGGTT+GGG - chr3_1:83056270-83056289 None:intergenic 40.0%
TTCTCTTAGGGAAGTTGACA+AGG - chr3_1:83056275-83056294 None:intergenic 40.0%
AGCAATAGCAATACTTCGTC+AGG + chr3_1:83056325-83056344 Msa0381080:CDS 40.0%
ATAGCAATACTTCGTCAGGT+AGG + chr3_1:83056329-83056348 Msa0381080:CDS 40.0%
TAGCAATACTTCGTCAGGTA+GGG + chr3_1:83056330-83056349 Msa0381080:CDS 40.0%
!!! CCCAAAGATTTTTGGTCACA+AGG + chr3_1:83056514-83056533 Msa0381080:CDS 40.0%
GCTGTTGAGAAACTCATGTA+GGG - chr3_1:83056976-83056995 None:intergenic 40.0%
AGCTGTTGAGAAACTCATGT+AGG - chr3_1:83056977-83056996 None:intergenic 40.0%
TTTGAACTGAGTGTATCAGC+TGG - chr3_1:83057235-83057254 None:intergenic 40.0%
CACAAACTATAAAAGGGCGA+AGG - chr3_1:83057278-83057297 None:intergenic 40.0%
! CTTCGCCCTTTTATAGTTTG+TGG + chr3_1:83057276-83057295 Msa0381080:intron 40.0%
! TTTTACGCGATTCGTCTACA+TGG + chr3_1:83057337-83057356 Msa0381080:intron 40.0%
ATATACGTTTCATGCACACG+TGG + chr3_1:83057403-83057422 Msa0381080:intron 40.0%
TATACGTTTCATGCACACGT+GGG + chr3_1:83057404-83057423 Msa0381080:intron 40.0%
CATGATCCTTCTCTTCTTGT+TGG + chr3_1:83057576-83057595 Msa0381080:intron 40.0%
TCTTACTCACTCACTCTTTC+TGG + chr3_1:83057621-83057640 Msa0381080:intron 40.0%
AAATTTGACGACACAGCTGA+CGG - chr3_1:83057804-83057823 None:intergenic 40.0%
CAATCACGGATGGAAGATTA+TGG - chr3_1:83057864-83057883 None:intergenic 40.0%
ATGGGCAGTGTTATCAATCA+CGG - chr3_1:83057878-83057897 None:intergenic 40.0%
ATGTTGTTCATGGGAAATGG+AGG - chr3_1:83057939-83057958 None:intergenic 40.0%
TGCAGCCAAATGCAAAAGTA+TGG - chr3_1:83058265-83058284 None:intergenic 40.0%
! GCTATAAAGAGTACAGCTGA+TGG - chr3_1:83058291-83058310 None:intergenic 40.0%
TCAGCTGTACTCTTTATAGC+GGG + chr3_1:83058291-83058310 Msa0381080:intron 40.0%
!!! GTACTCTTTATAGCGGGTTT+TGG + chr3_1:83058297-83058316 Msa0381080:intron 40.0%
TGCAGAATTGACAAGATTGC+TGG + chr3_1:83058632-83058651 Msa0381080:CDS 40.0%
! AGGATTTTTCTTAACGCACG+CGG - chr3_1:83058710-83058729 None:intergenic 40.0%
GAGCATGGGAAATTGTTCAA+AGG - chr3_1:83058808-83058827 None:intergenic 40.0%
GTATCGTCTAATCAGAGCAT+GGG - chr3_1:83058822-83058841 None:intergenic 40.0%
TGTATCGTCTAATCAGAGCA+TGG - chr3_1:83058823-83058842 None:intergenic 40.0%
GTCTATTATGGACCTGTCAA+TGG - chr3_1:83058902-83058921 None:intergenic 40.0%
!! CGGTACTTGTTTTCTCTTTG+AGG + chr3_1:83059116-83059135 Msa0381080:intron 40.0%
ATAAAGCAGCGGTGCAATTT+GGG - chr3_1:83059315-83059334 None:intergenic 40.0%
AATAAAGCAGCGGTGCAATT+TGG - chr3_1:83059316-83059335 None:intergenic 40.0%
TCTCTATGCACACTTTGTTG+TGG + chr3_1:83059519-83059538 Msa0381080:intron 40.0%
AGGCAGGTTAAATATGTGGA+GGG - chr3_1:83059559-83059578 None:intergenic 40.0%
AAGGCAGGTTAAATATGTGG+AGG - chr3_1:83059560-83059579 None:intergenic 40.0%
AGGAAGGCAGGTTAAATATG+TGG - chr3_1:83059563-83059582 None:intergenic 40.0%
ATAAGAAACGTAAGGAAGGC+AGG - chr3_1:83059575-83059594 None:intergenic 40.0%
ACGATGCAGTTCATCATTAG+AGG + chr3_1:83059703-83059722 Msa0381080:CDS 40.0%
TGGTGTTCTACAAACTGCTT+TGG + chr3_1:83059923-83059942 Msa0381080:intron 40.0%
ATTTCCCTCCCTTTCTTTGA+GGG - chr3_1:83060268-83060287 None:intergenic 40.0%
ATTACTTCGCCAACATTTGG+GGG + chr3_1:83060316-83060335 Msa0381080:intron 40.0%
!! GTACAGGTCTTATTTGCTTC+TGG + chr3_1:83060750-83060769 Msa0381080:intron 40.0%
ATACAGAATGTGAAGCCTCT+AGG - chr3_1:83060899-83060918 None:intergenic 40.0%
! TTGTGATTTTCTACCTCCAG+AGG + chr3_1:83060927-83060946 Msa0381080:intron 40.0%
! ATCTGGTTTATCACTTCCTC+TGG - chr3_1:83060946-83060965 None:intergenic 40.0%
GATTACTGTGAGTACCAGTT+TGG - chr3_1:83061117-83061136 None:intergenic 40.0%
AACTGGTACTCACAGTAATC+CGG + chr3_1:83061117-83061136 Msa0381080:intron 40.0%
CCAGACTTGAGGTAACATTA+AGG - chr3_1:83061166-83061185 None:intergenic 40.0%
CCTTAATGTTACCTCAAGTC+TGG + chr3_1:83061163-83061182 Msa0381080:intron 40.0%
! CAATCTGATGGTGTGGAAAT+AGG - chr3_1:83061336-83061355 None:intergenic 40.0%
! TCTATGACAATCTGATGGTG+TGG - chr3_1:83061343-83061362 None:intergenic 40.0%
AAGAATTTCGCTGTGGCAAA+GGG + chr3_1:83061406-83061425 Msa0381080:intron 40.0%
TACATAGTTTGAACACGTCG+AGG + chr3_1:83061429-83061448 Msa0381080:intron 40.0%
! CGTCGAGGCTATTTAAAACA+CGG + chr3_1:83061444-83061463 Msa0381080:intron 40.0%
GAAATACCTCATCTCAACAG+GGG - chr3_1:83061652-83061671 None:intergenic 40.0%
AATTAGCGAATCATGCAACC+TGG - chr3_1:83061913-83061932 None:intergenic 40.0%
CTAATTCCGTCCATGCAAAA+GGG + chr3_1:83061927-83061946 Msa0381080:CDS 40.0%
TAATTCCGTCCATGCAAAAG+GGG + chr3_1:83061928-83061947 Msa0381080:CDS 40.0%
!! GGGTTCCATATCATTTTTGC+TGG + chr3_1:83061948-83061967 Msa0381080:CDS 40.0%
TGAGATTGGTAAAGTTTGGG+TGG + chr3_1:83062024-83062043 Msa0381080:CDS 40.0%
ATTGGCAGGAAACATCTTTG+TGG - chr3_1:83062114-83062133 None:intergenic 40.0%
GAATATCTGCTCTGATGACT+GGG - chr3_1:83062145-83062164 None:intergenic 40.0%
AGAATATCTGCTCTGATGAC+TGG - chr3_1:83062146-83062165 None:intergenic 40.0%
AGTCATCAGAGCAGATATTC+TGG + chr3_1:83062145-83062164 Msa0381080:CDS 40.0%
CTTTACCGTAATCAGGGAAT+AGG - chr3_1:83062712-83062731 None:intergenic 40.0%
CTATTCCCTGATTACGGTAA+AGG + chr3_1:83062710-83062729 Msa0381080:CDS 40.0%
AGCGGGAAAGATAAAGGAAA+AGG + chr3_1:83062881-83062900 Msa0381080:CDS 40.0%
CTCCACTTGGAAAATTTGTG+AGG + chr3_1:83063032-83063051 Msa0381080:CDS 40.0%
TGGAGTAGAAGAAAGTGAAG+TGG + chr3_1:83063192-83063211 Msa0381080:CDS 40.0%
! AGAGCCCCATTTTGTATTAG+AGG - chr3_1:83063287-83063306 None:intergenic 40.0%
CTAATACAAAATGGGGCTCT+AGG + chr3_1:83063287-83063306 Msa0381080:CDS 40.0%
CCATCTTTGACATAGTACTG+TGG - chr3_1:83063319-83063338 None:intergenic 40.0%
CCACAGTACTATGTCAAAGA+TGG + chr3_1:83063316-83063335 Msa0381080:CDS 40.0%
AAGTTGGCAGATTCCTACAA+GGG + chr3_1:83063475-83063494 Msa0381080:CDS 40.0%
GGTAACCAATTCCATGTTTC+TGG + chr3_1:83063505-83063524 Msa0381080:CDS 40.0%
CTGTTCCAGAAACATGGAAT+TGG - chr3_1:83063513-83063532 None:intergenic 40.0%
!! TTCCATGTTTCTGGAACAGA+AGG + chr3_1:83063514-83063533 Msa0381080:CDS 40.0%
!! TCCATGTTTCTGGAACAGAA+GGG + chr3_1:83063515-83063534 Msa0381080:CDS 40.0%
!! TGATGATGTTTCTGAAGTGG+AGG + chr3_1:83063615-83063634 Msa0381080:CDS 40.0%
!! GATGATGTTTCTGAAGTGGA+GGG + chr3_1:83063616-83063635 Msa0381080:CDS 40.0%
GATCAAGGTCCAAATAACAG+AGG + chr3_1:83063643-83063662 Msa0381080:CDS 40.0%
GAGGTAGAAACAACCATTAC+AGG + chr3_1:83063692-83063711 Msa0381080:CDS 40.0%
AGAAATGCTTCTTCATGGCT+TGG - chr3_1:83063723-83063742 None:intergenic 40.0%
TCCAGAGAAATGCTTCTTCA+TGG - chr3_1:83063728-83063747 None:intergenic 40.0%
AAGCATTTCTCTGGATTGAG+TGG + chr3_1:83063733-83063752 Msa0381080:CDS 40.0%
AGCCAATACCCATATAACTC+TGG + chr3_1:83063790-83063809 Msa0381080:three_prime_UTR 40.0%
AGCCAGAGTTATATGGGTAT+TGG - chr3_1:83063795-83063814 None:intergenic 40.0%
! AGTCCTTGTTGATTGAGACT+TGG + chr3_1:83064018-83064037 Msa0381080:three_prime_UTR 40.0%
CATCCAAGTCTCAATCAACA+AGG - chr3_1:83064024-83064043 None:intergenic 40.0%
! TTCATACCGGAATCCAGTTT+TGG + chr3_1:83064144-83064163 Msa0381080:three_prime_UTR 40.0%
AAATTGGGCGTAGTTGACTA+AGG + chr3_1:83064292-83064311 Msa0381080:three_prime_UTR 40.0%
TGACTGTTGATGCCATTCAA+AGG + chr3_1:83064329-83064348 Msa0381080:three_prime_UTR 40.0%
TGTTGATGCCATTCAAAGGA+GGG + chr3_1:83064333-83064352 Msa0381080:three_prime_UTR 40.0%
AATGCTAACCCTCCTTTGAA+TGG - chr3_1:83064344-83064363 None:intergenic 40.0%
! ATTCAAAGGAGGGTTAGCAT+TGG + chr3_1:83064343-83064362 Msa0381080:three_prime_UTR 40.0%
CTACCCTACTTAGTGGAATA+AGG + chr3_1:83064426-83064445 Msa0381080:intron 40.0%
CTACCCTACTTAGTGGAATA+AGG + chr3_1:83064426-83064445 Msa0381080:intron 40.0%
!! GAGCCTTATTCCACTAAGTA+GGG - chr3_1:83064480-83064499 None:intergenic 40.0%
CTACTTAGTGGAATAAGGCT+CGG + chr3_1:83064479-83064498 Msa0381080:three_prime_UTR 40.0%
ATGTCGAATCGTTACGGTCA+AGG + chr3_1:83056172-83056191 Msa0381080:CDS 45.0%
TAGGGAAGTTGACAAGGTTG+GGG - chr3_1:83056269-83056288 None:intergenic 45.0%
CTTAGGGAAGTTGACAAGGT+TGG - chr3_1:83056271-83056290 None:intergenic 45.0%
!! CAACAAACTGGTTCTGGTTC+TGG + chr3_1:83056301-83056320 Msa0381080:CDS 45.0%
!! TATCGGTGTCAATGTGTCTG+TGG + chr3_1:83056650-83056669 Msa0381080:intron 45.0%
! CATGGCGTGTGCTATTACAT+TGG + chr3_1:83056846-83056865 Msa0381080:intron 45.0%
GCTTTCTGCAATTTAGGAGC+AGG + chr3_1:83056994-83057013 Msa0381080:CDS 45.0%
TTCTGCAATTTAGGAGCAGG+TGG + chr3_1:83056997-83057016 Msa0381080:CDS 45.0%
AGGTCTTCCAATAGAGATCC+TGG + chr3_1:83057202-83057221 Msa0381080:intron 45.0%
ACACAGCCAACAAGAAGAGA+AGG - chr3_1:83057585-83057604 None:intergenic 45.0%
TACTCACTCACTCTTTCTGG+CGG + chr3_1:83057624-83057643 Msa0381080:intron 45.0%
TGTTGTGGATTTCGAATGGC+AGG + chr3_1:83057676-83057695 Msa0381080:intron 45.0%
CATGAGAATGCCATCCATCA+TGG - chr3_1:83057702-83057721 None:intergenic 45.0%
!! CATGATGGATGGCATTCTCA+TGG + chr3_1:83057700-83057719 Msa0381080:intron 45.0%
TCACGGATGGAAGATTATGG+CGG - chr3_1:83057861-83057880 None:intergenic 45.0%
GCAGTGTTATCAATCACGGA+TGG - chr3_1:83057874-83057893 None:intergenic 45.0%
TTCATGGGAAATGGAGGTTG+AGG - chr3_1:83057933-83057952 None:intergenic 45.0%
! GGCTGCCATACTTTTGCATT+TGG + chr3_1:83058257-83058276 Msa0381080:intron 45.0%
!!! TTATAGCGGGTTTTGGCTTG+CGG + chr3_1:83058304-83058323 Msa0381080:intron 45.0%
ACATTGCTCACATGCAATGG+TGG + chr3_1:83058352-83058371 Msa0381080:intron 45.0%
! TCTGTTGCTTGTAGGAGATG+TGG - chr3_1:83058859-83058878 None:intergenic 45.0%
! GATCTTGTTATGTGCTGCAC+CGG - chr3_1:83060091-83060110 None:intergenic 45.0%
TTTCCCTCCCTTTCTTTGAG+GGG - chr3_1:83060267-83060286 None:intergenic 45.0%
CATTTCCCTCCCTTTCTTTG+AGG - chr3_1:83060269-83060288 None:intergenic 45.0%
TTACTTCGCCAACATTTGGG+GGG + chr3_1:83060317-83060336 Msa0381080:intron 45.0%
AACCTGGTATTAGAGCCTAG+AGG + chr3_1:83060881-83060900 Msa0381080:intron 45.0%
TGGTTTATCACTTCCTCTGG+AGG - chr3_1:83060943-83060962 None:intergenic 45.0%
TAGTAGTGTCTCCAGACTTG+AGG - chr3_1:83061177-83061196 None:intergenic 45.0%
TGACAGTTTCTGAGCTTCAC+TGG - chr3_1:83061202-83061221 None:intergenic 45.0%
! CAGTCAATGCCGTTTATTCG+TGG - chr3_1:83061270-83061289 None:intergenic 45.0%
GAAGAATTTCGCTGTGGCAA+AGG + chr3_1:83061405-83061424 Msa0381080:intron 45.0%
GCTAATTCCGTCCATGCAAA+AGG + chr3_1:83061926-83061945 Msa0381080:CDS 45.0%
! GATATGGAACCCCTTTTGCA+TGG - chr3_1:83061940-83061959 None:intergenic 45.0%
GATGACTGGGTCTTCAACAT+TGG - chr3_1:83062132-83062151 None:intergenic 45.0%
GAATATCCACCCTGAATCAG+AGG - chr3_1:83062528-83062547 None:intergenic 45.0%
TTCAGGGTGGATATTCGTTG+AGG + chr3_1:83062532-83062551 Msa0381080:intron 45.0%
!! TCTGTCTGCATGGTTTGGTT+CGG - chr3_1:83062644-83062663 None:intergenic 45.0%
CTTCATCTGTCTGCATGGTT+TGG - chr3_1:83062649-83062668 None:intergenic 45.0%
AGCATCTTCATCTGTCTGCA+TGG - chr3_1:83062654-83062673 None:intergenic 45.0%
AGGGACCTATTCCCTGATTA+CGG + chr3_1:83062704-83062723 Msa0381080:CDS 45.0%
! GTTTTTATCGGCATGTCTCG+AGG + chr3_1:83062733-83062752 Msa0381080:CDS 45.0%
CTATGACCACAATCCAGAAG+AGG + chr3_1:83062757-83062776 Msa0381080:CDS 45.0%
GAATGACCTCTTCTGGATTG+TGG - chr3_1:83062766-83062785 None:intergenic 45.0%
GCTGTTAGCGGGAAAGATAA+AGG + chr3_1:83062875-83062894 Msa0381080:CDS 45.0%
GATGTTAGCGGGAAAGAGAA+AGG + chr3_1:83062914-83062933 Msa0381080:CDS 45.0%
AGCGGGAAAGAGAAAGGAAA+AGG + chr3_1:83062920-83062939 Msa0381080:CDS 45.0%
AATGGGAAGAACCTGACAGA+AGG + chr3_1:83062989-83063008 Msa0381080:CDS 45.0%
ATGGGAAGAACCTGACAGAA+GGG + chr3_1:83062990-83063009 Msa0381080:CDS 45.0%
TTTCCAAGTGGAGCAGATGA+TGG - chr3_1:83063025-83063044 None:intergenic 45.0%
AATACTTGGATCAGGCCTGT+CGG - chr3_1:83063068-83063087 None:intergenic 45.0%
! CAGGCCTGATCCAAGTATTT+TGG + chr3_1:83063069-83063088 Msa0381080:CDS 45.0%
AAATCAAGGGAAACAGGGAC+CGG + chr3_1:83063244-83063263 Msa0381080:CDS 45.0%
! TTGATACATGGTCTTGGACG+TGG + chr3_1:83063424-83063443 Msa0381080:CDS 45.0%
! TGATACATGGTCTTGGACGT+GGG + chr3_1:83063425-83063444 Msa0381080:CDS 45.0%
GAAGTTGGCAGATTCCTACA+AGG + chr3_1:83063474-83063493 Msa0381080:CDS 45.0%
TCCCTTCTGTTCCAGAAACA+TGG - chr3_1:83063519-83063538 None:intergenic 45.0%
!! TTTCTGGAACAGAAGGGAGA+GGG + chr3_1:83063521-83063540 Msa0381080:CDS 45.0%
GTCCAAATAACAGAGGGAGA+GGG + chr3_1:83063650-83063669 Msa0381080:CDS 45.0%
!! GCCATGAAGAAGCATTTCTC+TGG + chr3_1:83063724-83063743 Msa0381080:CDS 45.0%
GACATGGTGTATTGCTCTTC+TGG + chr3_1:83063877-83063896 Msa0381080:three_prime_UTR 45.0%
AGCATGGCTCATACATTGAC+TGG + chr3_1:83063930-83063949 Msa0381080:three_prime_UTR 45.0%
! ATCTGGGAGCATAGTTGAGT+CGG - chr3_1:83064270-83064289 None:intergenic 45.0%
CTGTTGATGCCATTCAAAGG+AGG + chr3_1:83064332-83064351 Msa0381080:three_prime_UTR 45.0%
ATCAGAGCTACCCTACTTAG+TGG + chr3_1:83064419-83064438 Msa0381080:intron 45.0%
ATCAGAGCTACCCTACTTAG+TGG + chr3_1:83064419-83064438 Msa0381080:intron 45.0%
!! CGAGCCTTATTCCACTAAGT+AGG - chr3_1:83064481-83064500 None:intergenic 45.0%
! AAGGCTCGGTTGTTGTTCAT+TGG + chr3_1:83064493-83064512 Msa0381080:three_prime_UTR 45.0%
!! AAACAAAAAATATTTAAAAA+AGG - chr3_1:83057480-83057499 None:intergenic 5.0%
!!! AAATTATTTCTATTTATTTT+TGG + chr3_1:83058477-83058496 Msa0381080:intron 5.0%
!!! AATTATTTCTATTTATTTTT+GGG + chr3_1:83058478-83058497 Msa0381080:intron 5.0%
CGAATCGTTACGGTCAAGGT+AGG + chr3_1:83056176-83056195 Msa0381080:CDS 50.0%
TTCGTCAGGTAGGGTTCAAC+CGG + chr3_1:83056339-83056358 Msa0381080:CDS 50.0%
AAATTGCCATTCACACCCCC+CGG - chr3_1:83056361-83056380 None:intergenic 50.0%
TGGTATGATTTCCCTCACCG+TGG + chr3_1:83057017-83057036 Msa0381080:CDS 50.0%
GGTATGATTTCCCTCACCGT+GGG + chr3_1:83057018-83057037 Msa0381080:CDS 50.0%
GTATGATTTCCCTCACCGTG+GGG + chr3_1:83057019-83057038 Msa0381080:CDS 50.0%
TCGAGCACCAGGATCTCTAT+TGG - chr3_1:83057212-83057231 None:intergenic 50.0%
TTTCGAATGGCAGGCCATGA+TGG + chr3_1:83057685-83057704 Msa0381080:intron 50.0%
ATGGCATTCTCATGGAGCCA+TGG + chr3_1:83057708-83057727 Msa0381080:intron 50.0%
ATTCTCATGGAGCCATGGCA+TGG + chr3_1:83057713-83057732 Msa0381080:intron 50.0%
!! GAACGGTGGGTTGAAAGTCA+GGG + chr3_1:83057742-83057761 Msa0381080:intron 50.0%
!! TGACGGATCATGCGGGTTTT+GGG - chr3_1:83057787-83057806 None:intergenic 50.0%
TGGGAAATGGAGGTTGAGGA+CGG - chr3_1:83057929-83057948 None:intergenic 50.0%
CTTAACGCACGCGGCATTTA+AGG - chr3_1:83058701-83058720 None:intergenic 50.0%
ATGCTTTGCATGCTCAGCCT+TGG + chr3_1:83059618-83059637 Msa0381080:CDS 50.0%
! TTCTTTGAGGGGTGTGTGGT+GGG - chr3_1:83060256-83060275 None:intergenic 50.0%
! TTTCTTTGAGGGGTGTGTGG+TGG - chr3_1:83060257-83060276 None:intergenic 50.0%
ACCACACACCCCTCAAAGAA+AGG + chr3_1:83060256-83060275 Msa0381080:intron 50.0%
CCACACACCCCTCAAAGAAA+GGG + chr3_1:83060257-83060276 Msa0381080:intron 50.0%
ACACCCCTCAAAGAAAGGGA+GGG + chr3_1:83060261-83060280 Msa0381080:intron 50.0%
AACCATAGCCCCCCAAATGT+TGG - chr3_1:83060328-83060347 None:intergenic 50.0%
TCTTCTTGGGGTGACAAACC+TGG + chr3_1:83060865-83060884 Msa0381080:intron 50.0%
! AGCCTCTAGGCTCTAATACC+AGG - chr3_1:83060886-83060905 None:intergenic 50.0%
GGCTGAGACTAGTACTCAAC+CGG - chr3_1:83061139-83061158 None:intergenic 50.0%
TCTCTTCCCCTGTTGAGATG+AGG + chr3_1:83061643-83061662 Msa0381080:CDS 50.0%
! TGGAACCCCTTTTGCATGGA+CGG - chr3_1:83061936-83061955 None:intergenic 50.0%
CTGGAAGAGGGATGCTATCT+AGG - chr3_1:83062088-83062107 None:intergenic 50.0%
TCTTTGTGGCAGCTGGAAGA+GGG - chr3_1:83062100-83062119 None:intergenic 50.0%
ATCTTTGTGGCAGCTGGAAG+AGG - chr3_1:83062101-83062120 None:intergenic 50.0%
GGAAACATCTTTGTGGCAGC+TGG - chr3_1:83062107-83062126 None:intergenic 50.0%
ACTGGGTCTTCAACATTGGC+AGG - chr3_1:83062128-83062147 None:intergenic 50.0%
CTAGTTCCTCTGATTCAGGG+TGG + chr3_1:83062519-83062538 Msa0381080:intron 50.0%
!! GTGGACTTGGCTTGTAACTG+TGG - chr3_1:83062854-83062873 None:intergenic 50.0%
ATCTTTCCCGCTAACAGCAG+TGG - chr3_1:83062873-83062892 None:intergenic 50.0%
GCATCAATGACCCTTCTGTC+AGG - chr3_1:83063003-83063022 None:intergenic 50.0%
ATGCCATCATCTGCTCCACT+TGG + chr3_1:83063019-83063038 Msa0381080:CDS 50.0%
! TGAGGAAATCTAGAGCCGAC+AGG + chr3_1:83063050-83063069 Msa0381080:CDS 50.0%
GGTCTAAGCGTAGCAGAATC+TGG + chr3_1:83063172-83063191 Msa0381080:CDS 50.0%
TCGGGGAAATCAAGGGAAAC+AGG + chr3_1:83063238-83063257 Msa0381080:CDS 50.0%
CGGGGAAATCAAGGGAAACA+GGG + chr3_1:83063239-83063258 Msa0381080:CDS 50.0%
! GATACATGGTCTTGGACGTG+GGG + chr3_1:83063426-83063445 Msa0381080:CDS 50.0%
! ATACATGGTCTTGGACGTGG+GGG + chr3_1:83063427-83063446 Msa0381080:CDS 50.0%
TTGGCAGATTCCTACAAGGG+AGG + chr3_1:83063478-83063497 Msa0381080:CDS 50.0%
!! GTTTCTGGAACAGAAGGGAG+AGG + chr3_1:83063520-83063539 Msa0381080:CDS 50.0%
GAAGTGGAGGGTAGAGATCA+AGG + chr3_1:83063628-83063647 Msa0381080:CDS 50.0%
GGTCCAAATAACAGAGGGAG+AGG + chr3_1:83063649-83063668 Msa0381080:CDS 50.0%
CTCCCTCTCCCTCTGTTATT+TGG - chr3_1:83063655-83063674 None:intergenic 50.0%
AATAACAGAGGGAGAGGGAG+AGG + chr3_1:83063655-83063674 Msa0381080:CDS 50.0%
!! TGGCTTGGTCCTTCCTGTAA+TGG - chr3_1:83063708-83063727 None:intergenic 50.0%
CCCAAGGAGGAGAAAACTGT+CGG - chr3_1:83063909-83063928 None:intergenic 50.0%
! CCGACAGTTTTCTCCTCCTT+GGG + chr3_1:83063906-83063925 Msa0381080:three_prime_UTR 50.0%
TTTCTCCTCCTTGGGAAGCA+TGG + chr3_1:83063914-83063933 Msa0381080:three_prime_UTR 50.0%
TGTATGAGCCATGCTTCCCA+AGG - chr3_1:83063925-83063944 None:intergenic 50.0%
! GCTCGGTTGTTGTTCATTGG+AGG + chr3_1:83064496-83064515 Msa0381080:three_prime_UTR 50.0%
TCGTCAGGTAGGGTTCAACC+GGG + chr3_1:83056340-83056359 Msa0381080:CDS 55.0%
GCAGCGACAGCTTCATCTTG+CGG - chr3_1:83056397-83056416 None:intergenic 55.0%
CAAGATGAAGCTGTCGCTGC+TGG + chr3_1:83056397-83056416 Msa0381080:CDS 55.0%
!!! GAAGCTGTCGCTGCTGGTTT+TGG + chr3_1:83056403-83056422 Msa0381080:CDS 55.0%
!!! GCTGGTTTTGGCGCAGAAGA+TGG + chr3_1:83056415-83056434 Msa0381080:CDS 55.0%
!! GGTTTTGGCGCAGAAGATGG+TGG + chr3_1:83056418-83056437 Msa0381080:CDS 55.0%
!! TGGCGCAGAAGATGGTGGAT+TGG + chr3_1:83056423-83056442 Msa0381080:CDS 55.0%
CAACAATCCCTCTAGCCCCA+CGG - chr3_1:83057037-83057056 None:intergenic 55.0%
! GAATGGCAGGCCATGATGGA+TGG + chr3_1:83057689-83057708 Msa0381080:intron 55.0%
CCATGGCATGGTGGTAGGAA+CGG + chr3_1:83057725-83057744 Msa0381080:intron 55.0%
!! GGAACGGTGGGTTGAAAGTC+AGG + chr3_1:83057741-83057760 Msa0381080:intron 55.0%
!!! GATCATGCGGGTTTTGGGTC+GGG - chr3_1:83057782-83057801 None:intergenic 55.0%
!!! GGATCATGCGGGTTTTGGGT+CGG - chr3_1:83057783-83057802 None:intergenic 55.0%
!! CTGACGGATCATGCGGGTTT+TGG - chr3_1:83057788-83057807 None:intergenic 55.0%
! ACACAGCTGACGGATCATGC+GGG - chr3_1:83057794-83057813 None:intergenic 55.0%
! GACACAGCTGACGGATCATG+CGG - chr3_1:83057795-83057814 None:intergenic 55.0%
! CCCTTTCTTTGAGGGGTGTG+TGG - chr3_1:83060260-83060279 None:intergenic 55.0%
CACACCCCTCAAAGAAAGGG+AGG + chr3_1:83060260-83060279 Msa0381080:intron 55.0%
AGATGCTGAGCTTCCTTGCC+AGG + chr3_1:83061892-83061911 Msa0381080:CDS 55.0%
GCGAATCATGCAACCTGGCA+AGG - chr3_1:83061908-83061927 None:intergenic 55.0%
GCCAAGTCCACTGCTGTTAG+CGG + chr3_1:83062863-83062882 Msa0381080:CDS 55.0%
CCAAGTCCACTGCTGTTAGC+GGG + chr3_1:83062864-83062883 Msa0381080:CDS 55.0%
GAAACAGGGACCGGAAACTC+TGG + chr3_1:83063253-83063272 Msa0381080:CDS 55.0%
!! GGCGTTTTGGCCAGAGTTTC+CGG - chr3_1:83063266-83063285 None:intergenic 55.0%
AACTTCTGTACCGCGCCAAG+AGG - chr3_1:83063460-83063479 None:intergenic 55.0%
TCTTGGCGCGGTACAGAAGT+TGG + chr3_1:83063459-83063478 Msa0381080:CDS 55.0%
GCAGATTCCTACAAGGGAGG+AGG + chr3_1:83063481-83063500 Msa0381080:CDS 55.0%
GATTCCTACAAGGGAGGAGG+TGG + chr3_1:83063484-83063503 Msa0381080:CDS 55.0%
GTTACCACCTCCTCCCTTGT+AGG - chr3_1:83063491-83063510 None:intergenic 55.0%
GTGGCAGGGGAAAGAGAGAA+GGG + chr3_1:83063551-83063570 Msa0381080:CDS 55.0%
TGGCAGGGGAAAGAGAGAAG+GGG + chr3_1:83063552-83063571 Msa0381080:CDS 55.0%
GAGAGGGAGAGGTAGAGGAA+GGG + chr3_1:83063666-83063685 Msa0381080:CDS 55.0%
AGAGGGAGAGGTAGAGGAAG+GGG + chr3_1:83063667-83063686 Msa0381080:CDS 55.0%
! GCCGACAGTTTTCTCCTCCT+TGG + chr3_1:83063905-83063924 Msa0381080:three_prime_UTR 55.0%
ATGAGCCATGCTTCCCAAGG+AGG - chr3_1:83063922-83063941 None:intergenic 55.0%
!! AGGAGGGTTAGCATTGGCTC+TGG + chr3_1:83064349-83064368 Msa0381080:three_prime_UTR 55.0%
!! TTAGCATTGGCTCTGGCCTC+TGG + chr3_1:83064356-83064375 Msa0381080:three_prime_UTR 55.0%
!! TAGCATTGGCTCTGGCCTCT+GGG + chr3_1:83064357-83064376 Msa0381080:three_prime_UTR 55.0%
TCCTATGACTTCGACCCCAG+AGG - chr3_1:83064375-83064394 None:intergenic 55.0%
CGTCAGGTAGGGTTCAACCG+GGG + chr3_1:83056341-83056360 Msa0381080:CDS 60.0%
GTCAGGTAGGGTTCAACCGG+GGG + chr3_1:83056342-83056361 Msa0381080:CDS 60.0%
TCAGGTAGGGTTCAACCGGG+GGG + chr3_1:83056343-83056362 Msa0381080:CDS 60.0%
! GTTCAACCGGGGGGTGTGAA+TGG + chr3_1:83056352-83056371 Msa0381080:CDS 60.0%
GGGGCTAGAGGGATTGTTGC+TGG + chr3_1:83057038-83057057 Msa0381080:CDS 60.0%
GTATCAGCTGGTCGAGCACC+AGG - chr3_1:83057223-83057242 None:intergenic 60.0%
CTCATGGAGCCATGGCATGG+TGG + chr3_1:83057716-83057735 Msa0381080:intron 60.0%
TGGAGCCATGGCATGGTGGT+AGG + chr3_1:83057720-83057739 Msa0381080:intron 60.0%
CCGTTCCTACCACCATGCCA+TGG - chr3_1:83057728-83057747 None:intergenic 60.0%
TGGCATGGTGGTAGGAACGG+TGG + chr3_1:83057728-83057747 Msa0381080:intron 60.0%
GGCATGGTGGTAGGAACGGT+GGG + chr3_1:83057729-83057748 Msa0381080:intron 60.0%
CGCCAACATTTGGGGGGCTA+TGG + chr3_1:83060323-83060342 Msa0381080:intron 60.0%
! CCCGCTAACAGCAGTGGACT+TGG - chr3_1:83062867-83062886 None:intergenic 60.0%
TCTGTACCGCGCCAAGAGGA+AGG - chr3_1:83063456-83063475 None:intergenic 60.0%
GGAACAGAAGGGAGAGGGAG+TGG + chr3_1:83063526-83063545 Msa0381080:CDS 60.0%
ACAGAAGGGAGAGGGAGTGG+CGG + chr3_1:83063529-83063548 Msa0381080:CDS 60.0%
GGTGGCAGGGGAAAGAGAGA+AGG + chr3_1:83063550-83063569 Msa0381080:CDS 60.0%
GGCAGGGGAAAGAGAGAAGG+GGG + chr3_1:83063553-83063572 Msa0381080:CDS 60.0%
GCAGGGGAAAGAGAGAAGGG+GGG + chr3_1:83063554-83063573 Msa0381080:CDS 60.0%
AGAGGGAGAGGGAGAGGTAG+AGG + chr3_1:83063661-83063680 Msa0381080:CDS 60.0%
GGAGAGGGAGAGGTAGAGGA+AGG + chr3_1:83063665-83063684 Msa0381080:CDS 60.0%
AGAGGTAGAGGAAGGGGAGG+AGG + chr3_1:83063673-83063692 Msa0381080:CDS 60.0%
!! AGCATTGGCTCTGGCCTCTG+GGG + chr3_1:83064358-83064377 Msa0381080:three_prime_UTR 60.0%
!! GCCTCTGGGGTCGAAGTCAT+AGG + chr3_1:83064371-83064390 Msa0381080:three_prime_UTR 60.0%
TTCCCTCACCGTGGGGCTAG+AGG + chr3_1:83057026-83057045 Msa0381080:CDS 65.0%
TCCCTCACCGTGGGGCTAGA+GGG + chr3_1:83057027-83057046 Msa0381080:CDS 65.0%
TCCCTCTAGCCCCACGGTGA+GGG - chr3_1:83057031-83057050 None:intergenic 65.0%
ATCCCTCTAGCCCCACGGTG+AGG - chr3_1:83057032-83057051 None:intergenic 65.0%
!!! AGCGGGTTTTGGCTTGCGGC+AGG + chr3_1:83058308-83058327 Msa0381080:intron 65.0%
CGTGGGGGCAACCTTCCTCT+TGG + chr3_1:83063442-83063461 Msa0381080:CDS 65.0%
GGGCAACCTTCCTCTTGGCG+CGG + chr3_1:83063447-83063466 Msa0381080:CDS 65.0%
GGGAGAGGTAGAGGAAGGGG+AGG + chr3_1:83063670-83063689 Msa0381080:CDS 65.0%
GAAGGGAGAGGGAGTGGCGG+TGG + chr3_1:83063532-83063551 Msa0381080:CDS 70.0%
GAGAGGGAGTGGCGGTGGCA+GGG + chr3_1:83063537-83063556 Msa0381080:CDS 70.0%
AGAGGGAGTGGCGGTGGCAG+GGG + chr3_1:83063538-83063557 Msa0381080:CDS 70.0%
GGAGAGGGAGTGGCGGTGGC+AGG + chr3_1:83063536-83063555 Msa0381080:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 83056061 83064533 83056061 ID=Msa0381080;Name=Msa0381080
chr3_1 mRNA 83056061 83064533 83056061 ID=Msa0381080-mRNA-1;Parent=Msa0381080;Name=Msa0381080-mRNA-1;_AED=0.06;_eAED=0.06;_QI=111|1|1|1|0.77|0.7|10|723|867
chr3_1 exon 83056061 83056535 83056061 ID=Msa0381080-mRNA-1:exon:21275;Parent=Msa0381080-mRNA-1
chr3_1 exon 83056958 83057117 83056958 ID=Msa0381080-mRNA-1:exon:21276;Parent=Msa0381080-mRNA-1
chr3_1 exon 83057204 83057265 83057204 ID=Msa0381080-mRNA-1:exon:21277;Parent=Msa0381080-mRNA-1
chr3_1 exon 83058559 83058653 83058559 ID=Msa0381080-mRNA-1:exon:21278;Parent=Msa0381080-mRNA-1
chr3_1 exon 83059611 83059724 83059611 ID=Msa0381080-mRNA-1:exon:21279;Parent=Msa0381080-mRNA-1
chr3_1 exon 83060756 83060821 83060756 ID=Msa0381080-mRNA-1:exon:21280;Parent=Msa0381080-mRNA-1
chr3_1 exon 83061567 83061664 83061567 ID=Msa0381080-mRNA-1:exon:21281;Parent=Msa0381080-mRNA-1
chr3_1 exon 83061878 83062296 83061878 ID=Msa0381080-mRNA-1:exon:21282;Parent=Msa0381080-mRNA-1
chr3_1 exon 83062537 83064425 83062537 ID=Msa0381080-mRNA-1:exon:21283;Parent=Msa0381080-mRNA-1
chr3_1 exon 83064474 83064533 83064474 ID=Msa0381080-mRNA-1:exon:21284;Parent=Msa0381080-mRNA-1
chr3_1 five_prime_UTR 83056061 83056171 83056061 ID=Msa0381080-mRNA-1:five_prime_utr;Parent=Msa0381080-mRNA-1
chr3_1 CDS 83056172 83056535 83056172 ID=Msa0381080-mRNA-1:cds;Parent=Msa0381080-mRNA-1
chr3_1 CDS 83056958 83057117 83056958 ID=Msa0381080-mRNA-1:cds;Parent=Msa0381080-mRNA-1
chr3_1 CDS 83057204 83057265 83057204 ID=Msa0381080-mRNA-1:cds;Parent=Msa0381080-mRNA-1
chr3_1 CDS 83058559 83058653 83058559 ID=Msa0381080-mRNA-1:cds;Parent=Msa0381080-mRNA-1
chr3_1 CDS 83059611 83059724 83059611 ID=Msa0381080-mRNA-1:cds;Parent=Msa0381080-mRNA-1
chr3_1 CDS 83060756 83060821 83060756 ID=Msa0381080-mRNA-1:cds;Parent=Msa0381080-mRNA-1
chr3_1 CDS 83061567 83061664 83061567 ID=Msa0381080-mRNA-1:cds;Parent=Msa0381080-mRNA-1
chr3_1 CDS 83061878 83062296 83061878 ID=Msa0381080-mRNA-1:cds;Parent=Msa0381080-mRNA-1
chr3_1 CDS 83062537 83063762 83062537 ID=Msa0381080-mRNA-1:cds;Parent=Msa0381080-mRNA-1
chr3_1 three_prime_UTR 83063763 83064425 83063763 ID=Msa0381080-mRNA-1:three_prime_utr;Parent=Msa0381080-mRNA-1
chr3_1 three_prime_UTR 83064474 83064533 83064474 ID=Msa0381080-mRNA-1:three_prime_utr;Parent=Msa0381080-mRNA-1
Gene Sequence

>Msa0381080

ATGTCGAATCGTTACGGTCAAGGTAGGCAAGACAATTACAACAACAATAAGGGTTTCAACAAACCACAGATGAAATTCGTTCCTAAAAATTCGACCCCAACCTTGTCAACTTCCCTAAGAGAAAAACAACAACAAACTGGTTCTGGTTCTGGTAGCAATAGCAATACTTCGTCAGGTAGGGTTCAACCGGGGGGTGTGAATGGCAATTTCGTGTACTATTTGCCGCAAGATGAAGCTGTCGCTGCTGGTTTTGGCGCAGAAGATGGTGGATTGGATGCCCTTGAATCTCAGAAAGTTGTTGATCTTCTCAATTCTCAGTTGTCTCGTTTGCTCAAGTTGAAACCCAAAGATTTTTGGTCACAAGTGGCTAGTGATACATCCCTACATGAGTTTCTCAACAGCTTTCTGCAATTTAGGAGCAGGTGGTATGATTTCCCTCACCGTGGGGCTAGAGGGATTGTTGCTGGTGTTATTTTTGGAGAGCACGATTTGAGCCGTCGTGTTTTCATGATATTGTATCGAATGTCTTCCAATAGAGATCCTGGTGCTCGACCAGCTGATACACTCAGTTCAAAAGATCATGAAGTTCTTTTGCAGGAGAAGAAGTTGCTTGATTTGCCAAAGTTGTTTGATATATGTGCCATATACAGTCATGAAAATGCAGAATTGACAAGATTGCTGGTTAAAAATGCTTTGCATGCTCAGCCTTGGTTACATGATAATTTAGCTGCAGTAACATCTCATTTTATGGTCATTGTAAGCACAATGCATGAACGATGCAGTTCATCATTAGAGGTCTTATTTGCTTCTGGAAGTCTTGATGACCATAATGCTACTTTACTAAAAACTGATCTTCTGGAGGTGATGGACTTCATAAATGATGCAATTGTGTCAATGGATGCTTTTGTTAGTGCATACGAACAAGCAGCTTTATTGTTCTCTTCCCCTGTTGAGATGAGATATGGGAATGAGGAGATGCTGAGCTTCCTTGCCAGGTTGCATGATTCGCTAATTCCGTCCATGCAAAAGGGGTTCCATATCATTTTTGCTGGCAAACAAGATGACACAGTCTCTAATATTGTGGTTAGTTTGAAGATGTTAAGAATGAGATTGGTAAAGTTTGGGTGGCAATTGTTGCACCTTTGCTATTTAAGTGACGATGTGTTCCTAGATAGCATCCCTCTTCCAGCTGCCACAAAGATGTTTCCTGCCAATGTTGAAGACCCAGTCATCAGAGCAGATATTCTGGTTCAGACATTTAGAGAGATAAATACAGTATCATTAAGTTTCCAGGAAATCCATAAGAAGGAAACATTTCTTCAAGGTGTTGAAAGGAATTTCAATATATCAAGCAGGATTGAGGGATTACAGCATAATGGGTGGATATTCGTTGAGGATGAACAACTTAAATATATATCTGGGATTTTGAGTTCTTTGAAGGAGACTATTAACAGGGAGCCATATTCTGCAAAGATCTCTGTGCCGAACCAAACCATGCAGACAGATGAAGATGCTGCAGTTTTAGAGTCAAAAATCAGTCAAATTAGGGACCTATTCCCTGATTACGGTAAAGGGTTTTTATCGGCATGTCTCGAGGTCTATGACCACAATCCAGAAGAGGTCATTCAAAGAATTTTAGAAGGAACTCTTCATAATGATCTGAAGTGCTTGGATACTTCATTAGAGACGGTGCCACAGTTACAAGCCAAGTCCACTGCTGTTAGCGGGAAAGATAAAGGAAAAGGTGTACTAATTGATGTTAGCGGGAAAGAGAAAGGAAAAGGTATACTAATTGATTCTACGTCGGTGTCCTCAAATACAAAAGTTTCTAATGGGAAGAACCTGACAGAAGGGTCATTGATGCCATCATCTGCTCCACTTGGAAAATTTGTGAGGAAATCTAGAGCCGACAGGCCTGATCCAAGTATTTTGGACAATAATGATGAGAAAGATGCATCAAGAATTTTGCAATATGAATATGATGATGAGTATGATGACTCTTTTGATGACTTGGGTCTAAGCGTAGCAGAATCTGGAGTAGAAGAAAGTGAAGTGGTTGATGACGAAATGAATGAAAAATCGGGGAAATCAAGGGAAACAGGGACCGGAAACTCTGGCCAAAACGCCTCTAATACAAAATGGGGCTCTAGGCAAAAGCCACAGTACTATGTCAAAGATGGTAAGAATTACAGCTACAAAGTGTCTGGTGCAGTAGCAGTTGCAAATTCTAATGAAGCTTCTTTAGTTAATGAAGCTCAGAAAGAATTGATACATGGTCTTGGACGTGGGGGCAACCTTCCTCTTGGCGCGGTACAGAAGTTGGCAGATTCCTACAAGGGAGGAGGTGGTAACCAATTCCATGTTTCTGGAACAGAAGGGAGAGGGAGTGGCGGTGGCAGGGGAAAGAGAGAAGGGGGGAGACATATTGAACATAATCAACATCAGGAAAAACAATCTGATGATGTTTCTGAAGTGGAGGGTAGAGATCAAGGTCCAAATAACAGAGGGAGAGGGAGAGGTAGAGGAAGGGGAGGAGGTAGAAACAACCATTACAGGAAGGACCAAGCCATGAAGAAGCATTTCTCTGGATTGAGTGGTTTTTAA
Protein sequence

>Msa0381080

MSNRYGQGRQDNYNNNKGFNKPQMKFVPKNSTPTLSTSLREKQQQTGSGSGSNSNTSSGRVQPGGVNGNFVYYLPQDEAVAAGFGAEDGGLDALESQKVVDLLNSQLSRLLKLKPKDFWSQVASDTSLHEFLNSFLQFRSRWYDFPHRGARGIVAGVIFGEHDLSRRVFMILYRMSSNRDPGARPADTLSSKDHEVLLQEKKLLDLPKLFDICAIYSHENAELTRLLVKNALHAQPWLHDNLAAVTSHFMVIVSTMHERCSSSLEVLFASGSLDDHNATLLKTDLLEVMDFINDAIVSMDAFVSAYEQAALLFSSPVEMRYGNEEMLSFLARLHDSLIPSMQKGFHIIFAGKQDDTVSNIVVSLKMLRMRLVKFGWQLLHLCYLSDDVFLDSIPLPAATKMFPANVEDPVIRADILVQTFREINTVSLSFQEIHKKETFLQGVERNFNISSRIEGLQHNGWIFVEDEQLKYISGILSSLKETINREPYSAKISVPNQTMQTDEDAAVLESKISQIRDLFPDYGKGFLSACLEVYDHNPEEVIQRILEGTLHNDLKCLDTSLETVPQLQAKSTAVSGKDKGKGVLIDVSGKEKGKGILIDSTSVSSNTKVSNGKNLTEGSLMPSSAPLGKFVRKSRADRPDPSILDNNDEKDASRILQYEYDDEYDDSFDDLGLSVAESGVEESEVVDDEMNEKSGKSRETGTGNSGQNASNTKWGSRQKPQYYVKDGKNYSYKVSGAVAVANSNEASLVNEAQKELIHGLGRGGNLPLGAVQKLADSYKGGGGNQFHVSGTEGRGSGGGRGKREGGRHIEHNQHQEKQSDDVSEVEGRDQGPNNRGRGRGRGRGGGRNNHYRKDQAMKKHFSGLSGF*