Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621840 | XP_024637947.1 | 90.476 | 399 | 31 | 4 | 1 | 396 | 1 | 395 | 0.0 | 716 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621840 | sp|O80982|HSFA2_ARATH | 54.054 | 222 | 90 | 4 | 87 | 299 | 31 | 249 | 5.73e-75 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621840 | A0A396IIY0 | 90.476 | 399 | 31 | 4 | 1 | 396 | 1 | 395 | 0.0 | 716 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0621840 | TF | HSF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0621840 | 0.819725 | 9.988988e-53 | -8.615850e-47 |
| Msa0004840 | Msa0621840 | 0.802809 | 4.703137e-49 | -8.615850e-47 |
| Msa0005270 | Msa0621840 | 0.837161 | 6.120888e-57 | -8.615850e-47 |
| Msa0010770 | Msa0621840 | 0.815952 | 7.102119e-52 | -8.615850e-47 |
| Msa0013540 | Msa0621840 | 0.805312 | 1.418816e-49 | -8.615850e-47 |
| Msa0022750 | Msa0621840 | -0.805598 | 1.235541e-49 | -8.615850e-47 |
| Msa0027890 | Msa0621840 | 0.807723 | 4.397945e-50 | -8.615850e-47 |
| Msa0029850 | Msa0621840 | 0.802325 | 5.917657e-49 | -8.615850e-47 |
| Msa0031180 | Msa0621840 | 0.802469 | 5.527928e-49 | -8.615850e-47 |
| Msa0037120 | Msa0621840 | 0.800502 | 1.398295e-48 | -8.615850e-47 |
| Msa0038870 | Msa0621840 | 0.841402 | 4.857890e-58 | -8.615850e-47 |
| Msa0040620 | Msa0621840 | 0.812829 | 3.481524e-51 | -8.615850e-47 |
| Msa0041690 | Msa0621840 | 0.837546 | 4.875767e-57 | -8.615850e-47 |
| Msa0055100 | Msa0621840 | 0.802370 | 5.795217e-49 | -8.615850e-47 |
| Msa0055660 | Msa0621840 | 0.811417 | 7.076191e-51 | -8.615850e-47 |
| Msa0056450 | Msa0621840 | 0.805239 | 1.469118e-49 | -8.615850e-47 |
| Msa0059890 | Msa0621840 | 0.824430 | 8.108435e-54 | -8.615850e-47 |
| Msa0064920 | Msa0621840 | 0.800227 | 1.591396e-48 | -8.615850e-47 |
| Msa0068430 | Msa0621840 | 0.810366 | 1.194759e-50 | -8.615850e-47 |
| Msa0074750 | Msa0621840 | 0.815588 | 8.561537e-52 | -8.615850e-47 |
| Msa0077180 | Msa0621840 | 0.801494 | 8.767318e-49 | -8.615850e-47 |
| Msa0078480 | Msa0621840 | 0.805872 | 1.082272e-49 | -8.615850e-47 |
| Msa0081650 | Msa0621840 | 0.807390 | 5.173396e-50 | -8.615850e-47 |
| Msa0083090 | Msa0621840 | 0.809916 | 1.493887e-50 | -8.615850e-47 |
| Msa0084430 | Msa0621840 | 0.812137 | 4.930974e-51 | -8.615850e-47 |
| Msa0085370 | Msa0621840 | 0.827569 | 1.455404e-54 | -8.615850e-47 |
| Msa0086420 | Msa0621840 | 0.815110 | 1.093354e-51 | -8.615850e-47 |
| Msa0090550 | Msa0621840 | 0.816947 | 4.251760e-52 | -8.615850e-47 |
| Msa0091610 | Msa0621840 | 0.804293 | 2.316002e-49 | -8.615850e-47 |
| Msa0092440 | Msa0621840 | 0.819478 | 1.137458e-52 | -8.615850e-47 |
| Msa0096580 | Msa0621840 | 0.813429 | 2.571643e-51 | -8.615850e-47 |
| Msa0096980 | Msa0621840 | 0.818417 | 1.981723e-52 | -8.615850e-47 |
| Msa0104800 | Msa0621840 | 0.837068 | 6.462917e-57 | -8.615850e-47 |
| Msa0106620 | Msa0621840 | 0.802182 | 6.334507e-49 | -8.615850e-47 |
| Msa0119320 | Msa0621840 | 0.802181 | 6.336512e-49 | -8.615850e-47 |
| Msa0604290 | Msa0621840 | 0.802559 | 5.296291e-49 | -8.615850e-47 |
| Msa0621600 | Msa0621840 | 0.816344 | 5.804539e-52 | -8.615850e-47 |
| Msa0621650 | Msa0621840 | 0.812475 | 4.160411e-51 | -8.615850e-47 |
| Msa0621840 | Msa0626220 | 0.815567 | 8.651764e-52 | -8.615850e-47 |
| Msa0621840 | Msa0628420 | 0.821250 | 4.461794e-53 | -8.615850e-47 |
| Msa0621840 | Msa0628500 | 0.836384 | 9.658247e-57 | -8.615850e-47 |
| Msa0621840 | Msa0640940 | 0.836544 | 8.792074e-57 | -8.615850e-47 |
| Msa0621840 | Msa0641730 | 0.842016 | 3.343927e-58 | -8.615850e-47 |
| Msa0621840 | Msa0661320 | 0.804525 | 2.072192e-49 | -8.615850e-47 |
| Msa0621840 | Msa0679100 | 0.813546 | 2.422812e-51 | -8.615850e-47 |
| Msa0621840 | Msa0679360 | 0.829568 | 4.787690e-55 | -8.615850e-47 |
| Msa0621840 | Msa0679550 | 0.801516 | 8.678832e-49 | -8.615850e-47 |
| Msa0621840 | Msa0689420 | 0.817100 | 3.928800e-52 | -8.615850e-47 |
| Msa0621840 | Msa0689760 | 0.819180 | 1.329910e-52 | -8.615850e-47 |
| Msa0621840 | Msa0697720 | 0.824431 | 8.101911e-54 | -8.615850e-47 |
| Msa0621840 | Msa0705190 | 0.813140 | 2.975379e-51 | -8.615850e-47 |
| Msa0621840 | Msa0705990 | 0.802620 | 5.146571e-49 | -8.615850e-47 |
| Msa0621840 | Msa0709160 | 0.811813 | 5.801801e-51 | -8.615850e-47 |
| Msa0621840 | Msa0716860 | 0.820616 | 6.243190e-53 | -8.615850e-47 |
| Msa0621840 | Msa0721280 | 0.834526 | 2.847893e-56 | -8.615850e-47 |
| Msa0621840 | Msa0732600 | 0.826750 | 2.285084e-54 | -8.615850e-47 |
| Msa0621840 | Msa0743530 | 0.817699 | 2.879260e-52 | -8.615850e-47 |
| Msa0621840 | Msa0750330 | -0.809008 | 2.339095e-50 | -8.615850e-47 |
| Msa0621840 | Msa0756380 | 0.809725 | 1.641617e-50 | -8.615850e-47 |
| Msa0621840 | Msa0763890 | 0.811528 | 6.692139e-51 | -8.615850e-47 |
| Msa0621840 | Msa0763920 | 0.816109 | 6.549165e-52 | -8.615850e-47 |
| Msa0621840 | Msa0773590 | 0.811311 | 7.459790e-51 | -8.615850e-47 |
| Msa0621840 | Msa0787150 | 0.810767 | 9.785561e-51 | -8.615850e-47 |
| Msa0621840 | Msa0789560 | 0.839240 | 1.783871e-57 | -8.615850e-47 |
| Msa0621840 | Msa0794320 | 0.802886 | 4.534135e-49 | -8.615850e-47 |
| Msa0621840 | Msa0800700 | 0.800504 | 1.397418e-48 | -8.615850e-47 |
| Msa0621840 | Msa0805420 | 0.814306 | 1.647405e-51 | -8.615850e-47 |
| Msa0621840 | Msa0811040 | 0.816781 | 4.632133e-52 | -8.615850e-47 |
| Msa0621840 | Msa0829220 | 0.815511 | 8.905434e-52 | -8.615850e-47 |
| Msa0621840 | Msa0831130 | 0.800563 | 1.358966e-48 | -8.615850e-47 |
| Msa0621840 | Msa0831150 | 0.800219 | 1.597384e-48 | -8.615850e-47 |
| Msa0621840 | Msa0832090 | 0.804742 | 1.867052e-49 | -8.615850e-47 |
| Msa0621840 | Msa0842770 | 0.815224 | 1.031659e-51 | -8.615850e-47 |
| Msa0621840 | Msa0844110 | 0.826581 | 2.508290e-54 | -8.615850e-47 |
| Msa0621840 | Msa0857300 | 0.802752 | 4.833700e-49 | -8.615850e-47 |
| Msa0621840 | Msa0861470 | 0.802585 | 5.232837e-49 | -8.615850e-47 |
| Msa0621840 | Msa0866400 | 0.845917 | 3.009986e-59 | -8.615850e-47 |
| Msa0621840 | Msa0866410 | 0.837110 | 6.306519e-57 | -8.615850e-47 |
| Msa0621840 | Msa0868160 | 0.803351 | 3.633908e-49 | -8.615850e-47 |
| Msa0621840 | Msa0898660 | 0.802915 | 4.473190e-49 | -8.615850e-47 |
| Msa0621840 | Msa0903780 | 0.801856 | 7.390469e-49 | -8.615850e-47 |
| Msa0621840 | Msa0921420 | 0.801640 | 8.186918e-49 | -8.615850e-47 |
| Msa0621840 | Msa0958030 | 0.822690 | 2.070374e-53 | -8.615850e-47 |
| Msa0621840 | Msa0981310 | 0.835439 | 1.677240e-56 | -8.615850e-47 |
| Msa0621840 | Msa0992580 | 0.822253 | 2.615567e-53 | -8.615850e-47 |
| Msa0621840 | Msa0992600 | 0.828575 | 8.331483e-55 | -8.615850e-47 |
| Msa0621840 | Msa0994370 | 0.818454 | 1.943567e-52 | -8.615850e-47 |
| Msa0621840 | Msa0998590 | 0.806038 | 9.985236e-50 | -8.615850e-47 |
| Msa0621840 | Msa1009750 | 0.802499 | 5.450596e-49 | -8.615850e-47 |
| Msa0621840 | Msa1010460 | 0.831375 | 1.729744e-55 | -8.615850e-47 |
| Msa0621840 | Msa1027250 | 0.801586 | 8.396643e-49 | -8.615850e-47 |
| Msa0621840 | Msa1027300 | 0.810289 | 1.241240e-50 | -8.615850e-47 |
| Msa0621840 | Msa1027360 | 0.827750 | 1.316756e-54 | -8.615850e-47 |
| Msa0621840 | Msa1032170 | 0.804309 | 2.298046e-49 | -8.615850e-47 |
| Msa0621840 | Msa1034280 | 0.801715 | 7.900851e-49 | -8.615850e-47 |
| Msa0621840 | Msa1037520 | 0.820694 | 5.990325e-53 | -8.615850e-47 |
| Msa0621840 | Msa1040520 | 0.820967 | 5.185478e-53 | -8.615850e-47 |
| Msa0621840 | Msa1050700 | 0.800784 | 1.224943e-48 | -8.615850e-47 |
| Msa0621840 | Msa1063420 | 0.824834 | 6.511851e-54 | -8.615850e-47 |
| Msa0621840 | Msa1071320 | 0.805843 | 1.097776e-49 | -8.615850e-47 |
| Msa0621840 | Msa1072700 | 0.804888 | 1.740060e-49 | -8.615850e-47 |
| Msa0621840 | Msa1072900 | 0.805034 | 1.621726e-49 | -8.615850e-47 |
| Msa0621840 | Msa1077070 | 0.822340 | 2.496052e-53 | -8.615850e-47 |
| Msa0621840 | Msa1096060 | 0.803190 | 3.923793e-49 | -8.615850e-47 |
| Msa0621840 | Msa1096550 | 0.808722 | 2.693691e-50 | -8.615850e-47 |
| Msa0621840 | Msa1097820 | 0.803845 | 2.870662e-49 | -8.615850e-47 |
| Msa0621840 | Msa1105190 | 0.810139 | 1.337128e-50 | -8.615850e-47 |
| Msa0621840 | Msa1122780 | 0.826569 | 2.523981e-54 | -8.615850e-47 |
| Msa0621840 | Msa1127430 | 0.821949 | 3.075207e-53 | -8.615850e-47 |
| Msa0621840 | Msa1127770 | 0.810724 | 9.996969e-51 | -8.615850e-47 |
| Msa0621840 | Msa1130400 | 0.805032 | 1.623292e-49 | -8.615850e-47 |
| Msa0621840 | Msa1130530 | 0.825662 | 4.147722e-54 | -8.615850e-47 |
| Msa0621840 | Msa1131490 | 0.823904 | 1.077402e-53 | -8.615850e-47 |
| Msa0621840 | Msa1144970 | 0.803237 | 3.837317e-49 | -8.615850e-47 |
| Msa0621840 | Msa1163870 | 0.805706 | 1.172574e-49 | -8.615850e-47 |
| Msa0621840 | Msa1174310 | 0.812368 | 4.391705e-51 | -8.615850e-47 |
| Msa0621840 | Msa1174850 | 0.808580 | 2.888034e-50 | -8.615850e-47 |
| Msa0621840 | Msa1176360 | 0.804664 | 1.937533e-49 | -8.615850e-47 |
| Msa0621840 | Msa1178580 | 0.829771 | 4.271216e-55 | -8.615850e-47 |
| Msa0621840 | Msa1188600 | -0.814992 | 1.161463e-51 | -8.615850e-47 |
| Msa0621840 | Msa1204100 | -0.800556 | 1.363661e-48 | -8.615850e-47 |
| Msa0621840 | Msa1205480 | 0.820813 | 5.624911e-53 | -8.615850e-47 |
| Msa0621840 | Msa1205590 | 0.836951 | 6.926529e-57 | -8.615850e-47 |
| Msa0621840 | Msa1208790 | 0.830447 | 2.921416e-55 | -8.615850e-47 |
| Msa0621840 | Msa1209670 | 0.831224 | 1.884124e-55 | -8.615850e-47 |
| Msa0621840 | Msa1211340 | 0.849656 | 2.811696e-60 | -8.615850e-47 |
| Msa0621840 | Msa1212950 | 0.800091 | 1.695741e-48 | -8.615850e-47 |
| Msa0621840 | Msa1214320 | 0.806772 | 6.993790e-50 | -8.615850e-47 |
| Msa0621840 | Msa1215070 | 0.800807 | 1.212131e-48 | -8.615850e-47 |
| Msa0621840 | Msa1233850 | 0.830601 | 2.679143e-55 | -8.615850e-47 |
| Msa0621840 | Msa1240510 | 0.806863 | 6.691320e-50 | -8.615850e-47 |
| Msa0621840 | Msa1250530 | 0.802350 | 5.850558e-49 | -8.615850e-47 |
| Msa0621840 | Msa1258370 | 0.805901 | 1.067329e-49 | -8.615850e-47 |
| Msa0621840 | Msa1258980 | 0.820345 | 7.205205e-53 | -8.615850e-47 |
| Msa0621840 | Msa1259640 | 0.849425 | 3.260260e-60 | -8.615850e-47 |
| Msa0621840 | Msa1263290 | -0.814928 | 1.199731e-51 | -8.615850e-47 |
| Msa0621840 | Msa1266020 | 0.886881 | 2.323369e-72 | -8.615850e-47 |
| Msa0621840 | Msa1270660 | 0.846017 | 2.827811e-59 | -8.615850e-47 |
| Msa0621840 | Msa1270730 | 0.832894 | 7.283549e-56 | -8.615850e-47 |
| Msa0621840 | Msa1272620 | 0.804415 | 2.183621e-49 | -8.615850e-47 |
| Msa0621840 | Msa1276150 | 0.828961 | 6.719289e-55 | -8.615850e-47 |
| Msa0621840 | Msa1293400 | 0.807460 | 4.999661e-50 | -8.615850e-47 |
| Msa0621840 | Msa1297530 | 0.826058 | 3.340129e-54 | -8.615850e-47 |
| Msa0621840 | Msa1299330 | 0.810694 | 1.014570e-50 | -8.615850e-47 |
| Msa0621840 | Msa1320820 | 0.843274 | 1.549733e-58 | -8.615850e-47 |
| Msa0621840 | Msa1329050 | -0.809491 | 1.842907e-50 | -8.615850e-47 |
| Msa0621840 | Msa1329790 | 0.845106 | 4.992783e-59 | -8.615850e-47 |
| Msa0621840 | Msa1330630 | 0.818156 | 2.270151e-52 | -8.615850e-47 |
| Msa0621840 | Msa1332050 | 0.807718 | 4.408018e-50 | -8.615850e-47 |
| Msa0621840 | Msa1335230 | 0.815860 | 7.444686e-52 | -8.615850e-47 |
| Msa0621840 | Msa1336040 | 0.843410 | 1.425834e-58 | -8.615850e-47 |
| Msa0621840 | Msa1337170 | 0.833351 | 5.606552e-56 | -8.615850e-47 |
| Msa0621840 | Msa1339190 | 0.814843 | 1.253336e-51 | -8.615850e-47 |
| Msa0621840 | Msa1341490 | 0.832746 | 7.928322e-56 | -8.615850e-47 |
| Msa0621840 | Msa1344310 | 0.817719 | 2.849442e-52 | -8.615850e-47 |
| Msa0621840 | Msa1357080 | 0.802622 | 5.141454e-49 | -8.615850e-47 |
| Msa0621840 | Msa1357890 | 0.833080 | 6.549317e-56 | -8.615850e-47 |
| Msa0621840 | Msa1359920 | 0.813895 | 2.030393e-51 | -8.615850e-47 |
| Msa0621840 | Msa1362420 | 0.805934 | 1.050210e-49 | -8.615850e-47 |
| Msa0621840 | Msa1370590 | 0.841006 | 6.171923e-58 | -8.615850e-47 |
| Msa0621840 | Msa1372290 | 0.850354 | 1.793057e-60 | -8.615850e-47 |
| Msa0621840 | Msa1376130 | 0.803990 | 2.677367e-49 | -8.615850e-47 |
| Msa0621840 | Msa1384100 | 0.841219 | 5.425378e-58 | -8.615850e-47 |
| Msa0621840 | Msa1392700 | 0.800980 | 1.117205e-48 | -8.615850e-47 |
| Msa0621840 | Msa1393800 | 0.810360 | 1.197936e-50 | -8.615850e-47 |
| Msa0621840 | Msa1398090 | 0.832295 | 1.025749e-55 | -8.615850e-47 |
| Msa0621840 | Msa1401460 | 0.811586 | 6.500299e-51 | -8.615850e-47 |
| Msa0621840 | Msa1407600 | 0.809369 | 1.958148e-50 | -8.615850e-47 |
| Msa0621840 | Msa1410390 | 0.901969 | 1.563477e-78 | -8.615850e-47 |
| Msa0621840 | Msa1411950 | 0.809562 | 1.779499e-50 | -8.615850e-47 |
| Msa0621840 | Msa1416260 | 0.812433 | 4.249448e-51 | -8.615850e-47 |
| Msa0621840 | Msa1416370 | 0.802590 | 5.219400e-49 | -8.615850e-47 |
| Msa0621840 | Msa1417810 | -0.804853 | 1.769388e-49 | -8.615850e-47 |
| Msa0621840 | Msa1418260 | 0.813149 | 2.963097e-51 | -8.615850e-47 |
| Msa0621840 | Msa1420250 | 0.820086 | 8.260995e-53 | -8.615850e-47 |
| Msa0621840 | Msa1424350 | 0.808566 | 2.908463e-50 | -8.615850e-47 |
| Msa0621840 | Msa1426350 | 0.803476 | 3.423648e-49 | -8.615850e-47 |
| Msa0621840 | Msa1426570 | 0.815770 | 7.796827e-52 | -8.615850e-47 |
| Msa0621840 | Msa1426910 | 0.827724 | 1.335381e-54 | -8.615850e-47 |
| Msa0621840 | Msa1437330 | 0.808514 | 2.983471e-50 | -8.615850e-47 |
| Msa0621840 | Msa1442790 | 0.820997 | 5.101425e-53 | -8.615850e-47 |
| Msa0621840 | Msa1444120 | 0.845489 | 3.935128e-59 | -8.615850e-47 |
| Msa0621840 | Msa1445400 | -0.806271 | 8.921061e-50 | -8.615850e-47 |
| Msa0621840 | Msa1446080 | 0.814110 | 1.820276e-51 | -8.615850e-47 |
| Msa0621840 | Msa1449350 | -0.819065 | 1.411944e-52 | -8.615850e-47 |
| Msa0621840 | Msa1449520 | 0.812280 | 4.590779e-51 | -8.615850e-47 |
| Msa0621840 | Msa1450720 | 0.806724 | 7.159350e-50 | -8.615850e-47 |
| Msa0621840 | Msa1451150 | 0.835335 | 1.782084e-56 | -8.615850e-47 |
| Msa0621840 | Msa1454960 | 0.823681 | 1.214983e-53 | -8.615850e-47 |
| Msa0621840 | Msa1456230 | 0.831501 | 1.610844e-55 | -8.615850e-47 |
| Msa0621840 | Msa1458030 | 0.801563 | 8.489842e-49 | -8.615850e-47 |
| Msa0621840 | Msa1458610 | 0.807691 | 4.465806e-50 | -8.615850e-47 |
| Msa0621840 | Msa1465570 | 0.809628 | 1.722490e-50 | -8.615850e-47 |
| Msa0621840 | Msa1467000 | 0.803572 | 3.270249e-49 | -8.615850e-47 |
| Msa0126230 | Msa0621840 | 0.805172 | 1.517436e-49 | -8.615850e-47 |
| Msa0126790 | Msa0621840 | 0.807275 | 5.473613e-50 | -8.615850e-47 |
| Msa0130720 | Msa0621840 | 0.813465 | 2.524812e-51 | -8.615850e-47 |
| Msa0136120 | Msa0621840 | 0.815968 | 7.043842e-52 | -8.615850e-47 |
| Msa0138210 | Msa0621840 | 0.822786 | 1.966341e-53 | -8.615850e-47 |
| Msa0138500 | Msa0621840 | 0.810990 | 8.756397e-51 | -8.615850e-47 |
| Msa0138520 | Msa0621840 | 0.816042 | 6.781834e-52 | -8.615850e-47 |
| Msa0140510 | Msa0621840 | -0.811481 | 6.850545e-51 | -8.615850e-47 |
| Msa0143850 | Msa0621840 | 0.821970 | 3.041430e-53 | -8.615850e-47 |
| Msa0145010 | Msa0621840 | 0.820117 | 8.126230e-53 | -8.615850e-47 |
| Msa0145150 | Msa0621840 | 0.803371 | 3.599337e-49 | -8.615850e-47 |
| Msa0151180 | Msa0621840 | 0.817721 | 2.847646e-52 | -8.615850e-47 |
| Msa0167980 | Msa0621840 | 0.805958 | 1.038389e-49 | -8.615850e-47 |
| Msa0171870 | Msa0621840 | 0.807290 | 5.432729e-50 | -8.615850e-47 |
| Msa0175050 | Msa0621840 | 0.810711 | 1.006041e-50 | -8.615850e-47 |
| Msa0183010 | Msa0621840 | -0.803326 | 3.678169e-49 | -8.615850e-47 |
| Msa0183420 | Msa0621840 | 0.827143 | 1.841373e-54 | -8.615850e-47 |
| Msa0183870 | Msa0621840 | 0.808066 | 3.716504e-50 | -8.615850e-47 |
| Msa0187060 | Msa0621840 | 0.815130 | 1.082207e-51 | -8.615850e-47 |
| Msa0187490 | Msa0621840 | 0.800923 | 1.147804e-48 | -8.615850e-47 |
| Msa0192640 | Msa0621840 | 0.819714 | 1.004637e-52 | -8.615850e-47 |
| Msa0200560 | Msa0621840 | 0.804412 | 2.187591e-49 | -8.615850e-47 |
| Msa0202730 | Msa0621840 | 0.809144 | 2.187873e-50 | -8.615850e-47 |
| Msa0205010 | Msa0621840 | 0.802444 | 5.594916e-49 | -8.615850e-47 |
| Msa0218350 | Msa0621840 | 0.802001 | 6.901466e-49 | -8.615850e-47 |
| Msa0220730 | Msa0621840 | 0.806736 | 7.115288e-50 | -8.615850e-47 |
| Msa0223330 | Msa0621840 | 0.823784 | 1.149224e-53 | -8.615850e-47 |
| Msa0227230 | Msa0621840 | 0.800511 | 1.392608e-48 | -8.615850e-47 |
| Msa0232340 | Msa0621840 | 0.829553 | 4.827245e-55 | -8.615850e-47 |
| Msa0236770 | Msa0621840 | 0.825571 | 4.360168e-54 | -8.615850e-47 |
| Msa0237200 | Msa0621840 | 0.813801 | 2.129783e-51 | -8.615850e-47 |
| Msa0366210 | Msa0621840 | 0.811125 | 8.186973e-51 | -8.615850e-47 |
| Msa0376020 | Msa0621840 | 0.801597 | 8.351740e-49 | -8.615850e-47 |
| Msa0377440 | Msa0621840 | 0.821353 | 4.224540e-53 | -8.615850e-47 |
| Msa0377450 | Msa0621840 | 0.808518 | 2.978065e-50 | -8.615850e-47 |
| Msa0381000 | Msa0621840 | 0.833012 | 6.809458e-56 | -8.615850e-47 |
| Msa0381080 | Msa0621840 | 0.827245 | 1.740478e-54 | -8.615850e-47 |
| Msa0382370 | Msa0621840 | 0.810832 | 9.473578e-51 | -8.615850e-47 |
| Msa0387050 | Msa0621840 | 0.836092 | 1.145596e-56 | -8.615850e-47 |
| Msa0387810 | Msa0621840 | 0.846585 | 1.980615e-59 | -8.615850e-47 |
| Msa0388650 | Msa0621840 | 0.809330 | 1.995575e-50 | -8.615850e-47 |
| Msa0390530 | Msa0621840 | 0.803571 | 3.272083e-49 | -8.615850e-47 |
| Msa0390960 | Msa0621840 | 0.834921 | 2.265867e-56 | -8.615850e-47 |
| Msa0394260 | Msa0621840 | 0.805814 | 1.112853e-49 | -8.615850e-47 |
| Msa0394690 | Msa0621840 | 0.814166 | 1.769694e-51 | -8.615850e-47 |
| Msa0395980 | Msa0621840 | 0.842749 | 2.138210e-58 | -8.615850e-47 |
| Msa0401560 | Msa0621840 | 0.816509 | 5.330412e-52 | -8.615850e-47 |
| Msa0411410 | Msa0621840 | 0.805133 | 1.546793e-49 | -8.615850e-47 |
| Msa0417650 | Msa0621840 | 0.808421 | 3.122359e-50 | -8.615850e-47 |
| Msa0420820 | Msa0621840 | 0.807603 | 4.663381e-50 | -8.615850e-47 |
| Msa0427040 | Msa0621840 | 0.811260 | 7.651205e-51 | -8.615850e-47 |
| Msa0430870 | Msa0621840 | 0.837597 | 4.731768e-57 | -8.615850e-47 |
| Msa0430950 | Msa0621840 | 0.828943 | 6.784961e-55 | -8.615850e-47 |
| Msa0432160 | Msa0621840 | 0.805125 | 1.552280e-49 | -8.615850e-47 |
| Msa0432500 | Msa0621840 | 0.821214 | 4.548067e-53 | -8.615850e-47 |
| Msa0440510 | Msa0621840 | 0.826846 | 2.168058e-54 | -8.615850e-47 |
| Msa0442270 | Msa0621840 | 0.814651 | 1.382040e-51 | -8.615850e-47 |
| Msa0443000 | Msa0621840 | 0.813385 | 2.629664e-51 | -8.615850e-47 |
| Msa0443430 | Msa0621840 | 0.828755 | 7.535674e-55 | -8.615850e-47 |
| Msa0446900 | Msa0621840 | 0.819590 | 1.072479e-52 | -8.615850e-47 |
| Msa0450400 | Msa0621840 | -0.803191 | 3.922544e-49 | -8.615850e-47 |
| Msa0455740 | Msa0621840 | 0.810040 | 1.404335e-50 | -8.615850e-47 |
| Msa0473330 | Msa0621840 | 0.828565 | 8.378641e-55 | -8.615850e-47 |
| Msa0473980 | Msa0621840 | 0.816087 | 6.623847e-52 | -8.615850e-47 |
| Msa0476680 | Msa0621840 | 0.803889 | 2.810683e-49 | -8.615850e-47 |
| Msa0482040 | Msa0621840 | 0.828305 | 9.679792e-55 | -8.615850e-47 |
| Msa0482180 | Msa0621840 | 0.804294 | 2.314519e-49 | -8.615850e-47 |
| Msa0244970 | Msa0621840 | 0.823785 | 1.148810e-53 | -8.615850e-47 |
| Msa0244980 | Msa0621840 | 0.820683 | 6.026427e-53 | -8.615850e-47 |
| Msa0249310 | Msa0621840 | 0.813047 | 3.118558e-51 | -8.615850e-47 |
| Msa0269520 | Msa0621840 | 0.805237 | 1.470538e-49 | -8.615850e-47 |
| Msa0271790 | Msa0621840 | 0.836447 | 9.309381e-57 | -8.615850e-47 |
| Msa0274970 | Msa0621840 | 0.806983 | 6.310784e-50 | -8.615850e-47 |
| Msa0277420 | Msa0621840 | 0.812410 | 4.299724e-51 | -8.615850e-47 |
| Msa0283420 | Msa0621840 | 0.831939 | 1.256035e-55 | -8.615850e-47 |
| Msa0287790 | Msa0621840 | 0.815092 | 1.103482e-51 | -8.615850e-47 |
| Msa0296790 | Msa0621840 | 0.828045 | 1.118108e-54 | -8.615850e-47 |
| Msa0301810 | Msa0621840 | 0.808248 | 3.400733e-50 | -8.615850e-47 |
| Msa0310430 | Msa0621840 | 0.845662 | 3.532276e-59 | -8.615850e-47 |
| Msa0311720 | Msa0621840 | 0.804962 | 1.679054e-49 | -8.615850e-47 |
| Msa0312910 | Msa0621840 | 0.813864 | 2.062267e-51 | -8.615850e-47 |
| Msa0315680 | Msa0621840 | 0.808304 | 3.307265e-50 | -8.615850e-47 |
| Msa0321690 | Msa0621840 | 0.830016 | 3.723704e-55 | -8.615850e-47 |
| Msa0339910 | Msa0621840 | 0.812344 | 4.445136e-51 | -8.615850e-47 |
| Msa0347950 | Msa0621840 | 0.801618 | 8.270469e-49 | -8.615850e-47 |
| Msa0347990 | Msa0621840 | 0.809402 | 1.926268e-50 | -8.615850e-47 |
| Msa0362890 | Msa0621840 | 0.809221 | 2.105711e-50 | -8.615850e-47 |
| Msa0363060 | Msa0621840 | 0.833827 | 4.264447e-56 | -8.615850e-47 |
| Msa0363640 | Msa0621840 | 0.804774 | 1.838353e-49 | -8.615850e-47 |
| Msa0363810 | Msa0621840 | 0.807098 | 5.967168e-50 | -8.615850e-47 |
| Msa0482940 | Msa0621840 | 0.841237 | 5.368623e-58 | -8.615850e-47 |
| Msa0483740 | Msa0621840 | 0.808538 | 2.948527e-50 | -8.615850e-47 |
| Msa0484740 | Msa0621840 | 0.806864 | 6.686970e-50 | -8.615850e-47 |
| Msa0485490 | Msa0621840 | 0.804631 | 1.968489e-49 | -8.615850e-47 |
| Msa0489660 | Msa0621840 | 0.819074 | 1.405838e-52 | -8.615850e-47 |
| Msa0491000 | Msa0621840 | 0.844182 | 8.857989e-59 | -8.615850e-47 |
| Msa0504780 | Msa0621840 | 0.803321 | 3.686380e-49 | -8.615850e-47 |
| Msa0506830 | Msa0621840 | 0.823793 | 1.143758e-53 | -8.615850e-47 |
| Msa0516020 | Msa0621840 | 0.802565 | 5.281194e-49 | -8.615850e-47 |
| Msa0517640 | Msa0621840 | 0.804357 | 2.245477e-49 | -8.615850e-47 |
| Msa0517650 | Msa0621840 | 0.806610 | 7.568234e-50 | -8.615850e-47 |
| Msa0521010 | Msa0621840 | 0.805752 | 1.147098e-49 | -8.615850e-47 |
| Msa0530710 | Msa0621840 | 0.821008 | 5.071761e-53 | -8.615850e-47 |
| Msa0530870 | Msa0621840 | -0.801471 | 8.864580e-49 | -8.615850e-47 |
| Msa0531250 | Msa0621840 | 0.821798 | 3.334100e-53 | -8.615850e-47 |
| Msa0537770 | Msa0621840 | 0.810199 | 1.298266e-50 | -8.615850e-47 |
| Msa0542290 | Msa0621840 | 0.812492 | 4.125298e-51 | -8.615850e-47 |
| Msa0542560 | Msa0621840 | 0.802515 | 5.410027e-49 | -8.615850e-47 |
| Msa0554380 | Msa0621840 | -0.802772 | 4.787873e-49 | -8.615850e-47 |
| Msa0555640 | Msa0621840 | 0.835602 | 1.525122e-56 | -8.615850e-47 |
| Msa0560500 | Msa0621840 | 0.803546 | 3.310904e-49 | -8.615850e-47 |
| Msa0566350 | Msa0621840 | 0.826322 | 2.890588e-54 | -8.615850e-47 |
| Msa0566750 | Msa0621840 | 0.822551 | 2.230313e-53 | -8.615850e-47 |
| Msa0577200 | Msa0621840 | -0.815333 | 9.757394e-52 | -8.615850e-47 |
| Msa0580180 | Msa0621840 | 0.807832 | 4.168880e-50 | -8.615850e-47 |
| Msa0580640 | Msa0621840 | 0.810018 | 1.420080e-50 | -8.615850e-47 |
| Msa0588090 | Msa0621840 | 0.817155 | 3.818472e-52 | -8.615850e-47 |
| Msa0588120 | Msa0621840 | 0.808953 | 2.403897e-50 | -8.615850e-47 |
| Msa0588220 | Msa0621840 | 0.823993 | 1.026598e-53 | -8.615850e-47 |
| Msa0600080 | Msa0621840 | 0.819851 | 9.346002e-53 | -8.615850e-47 |
| Msa0600450 | Msa0621840 | 0.826808 | 2.213946e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621840 | MtrunA17_Chr4g0071051 | 90.476 | 399 | 31 | 4 | 1 | 396 | 1 | 395 | 0.0 | 716 |
| Msa0621840 | MtrunA17_Chr3g0135831 | 44.099 | 322 | 134 | 7 | 87 | 380 | 33 | 336 | 3.25e-76 | 241 |
| Msa0621840 | MtrunA17_Chr7g0260331 | 47.273 | 275 | 124 | 4 | 68 | 321 | 7 | 281 | 2.33e-75 | 238 |
| Msa0621840 | MtrunA17_Chr1g0204741 | 47.619 | 252 | 115 | 6 | 64 | 305 | 6 | 250 | 4.18e-70 | 223 |
| Msa0621840 | MtrunA17_Chr5g0410881 | 51.220 | 205 | 84 | 3 | 87 | 277 | 21 | 223 | 1.14e-64 | 214 |
| Msa0621840 | MtrunA17_Chr1g0185131 | 47.727 | 220 | 106 | 3 | 87 | 304 | 19 | 231 | 3.54e-63 | 206 |
| Msa0621840 | MtrunA17_Chr4g0039891 | 51.852 | 216 | 82 | 5 | 99 | 298 | 11 | 220 | 1.26e-61 | 206 |
| Msa0621840 | MtrunA17_Chr8g0379701 | 43.939 | 198 | 101 | 2 | 99 | 286 | 11 | 208 | 4.18e-51 | 176 |
| Msa0621840 | MtrunA17_Chr6g0467041 | 41.004 | 239 | 118 | 5 | 100 | 335 | 22 | 240 | 1.01e-48 | 168 |
| Msa0621840 | MtrunA17_Chr2g0330821 | 41.038 | 212 | 113 | 4 | 94 | 301 | 73 | 276 | 2.27e-46 | 162 |
| Msa0621840 | MtrunA17_Chr8g0378061 | 45.604 | 182 | 95 | 2 | 101 | 279 | 23 | 203 | 1.01e-45 | 164 |
| Msa0621840 | MtrunA17_Chr8g0392001 | 47.120 | 191 | 87 | 3 | 100 | 276 | 22 | 212 | 6.77e-45 | 159 |
| Msa0621840 | MtrunA17_Chr6g0485571 | 45.263 | 190 | 99 | 2 | 100 | 285 | 11 | 199 | 2.96e-44 | 156 |
| Msa0621840 | MtrunA17_Chr2g0284481 | 43.243 | 185 | 95 | 3 | 99 | 273 | 14 | 198 | 3.00e-41 | 149 |
| Msa0621840 | MtrunA17_Chr3g0134031 | 60.000 | 110 | 43 | 1 | 94 | 203 | 18 | 126 | 8.37e-39 | 142 |
| Msa0621840 | MtrunA17_Chr5g0397881 | 63.441 | 93 | 34 | 0 | 98 | 190 | 22 | 114 | 6.55e-38 | 140 |
| Msa0621840 | MtrunA17_Chr5g0402291 | 62.766 | 94 | 35 | 0 | 97 | 190 | 6 | 99 | 1.27e-37 | 137 |
| Msa0621840 | MtrunA17_Chr5g0441531 | 64.516 | 93 | 33 | 0 | 98 | 190 | 23 | 115 | 3.43e-37 | 135 |
| Msa0621840 | MtrunA17_Chr7g0257331 | 53.571 | 112 | 48 | 1 | 91 | 198 | 9 | 120 | 3.19e-36 | 132 |
| Msa0621840 | MtrunA17_Chr1g0203601 | 58.065 | 93 | 39 | 0 | 98 | 190 | 16 | 108 | 4.66e-34 | 128 |
| Msa0621840 | MtrunA17_Chr8g0375041 | 41.975 | 162 | 85 | 3 | 95 | 248 | 4 | 164 | 4.99e-34 | 127 |
| Msa0621840 | MtrunA17_Chr6g0472421 | 59.140 | 93 | 38 | 0 | 98 | 190 | 31 | 123 | 7.64e-33 | 126 |
| Msa0621840 | MtrunA17_Chr4g0047421 | 56.701 | 97 | 38 | 1 | 98 | 190 | 31 | 127 | 1.54e-31 | 119 |
| Msa0621840 | MtrunA17_Chr1g0179321 | 63.014 | 73 | 27 | 0 | 87 | 159 | 36 | 108 | 9.25e-28 | 105 |
| Msa0621840 | MtrunA17_Chr1g0179311 | 41.732 | 127 | 69 | 1 | 160 | 281 | 14 | 140 | 8.61e-24 | 101 |
| Msa0621840 | MtrunA17_Chr4g0023771 | 57.143 | 70 | 29 | 1 | 91 | 159 | 6 | 75 | 8.63e-20 | 84.3 |
| Msa0621840 | MtrunA17_Chr2g0330841 | 35.115 | 131 | 82 | 1 | 160 | 287 | 41 | 171 | 2.03e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621840 | AT2G26150.1 | 54.054 | 222 | 90 | 4 | 87 | 299 | 31 | 249 | 5.83e-76 | 239 |
| Msa0621840 | AT2G26150.4 | 54.054 | 222 | 90 | 4 | 87 | 299 | 31 | 249 | 5.83e-76 | 239 |
| Msa0621840 | AT5G54070.1 | 52.713 | 258 | 108 | 7 | 68 | 322 | 46 | 292 | 7.66e-74 | 233 |
| Msa0621840 | AT3G22830.1 | 46.586 | 249 | 117 | 4 | 73 | 306 | 34 | 281 | 1.74e-73 | 235 |
| Msa0621840 | AT3G51910.1 | 48.792 | 207 | 96 | 3 | 90 | 295 | 19 | 216 | 1.06e-62 | 203 |
| Msa0621840 | AT5G16820.1 | 48.889 | 225 | 98 | 3 | 70 | 282 | 2 | 221 | 1.77e-62 | 208 |
| Msa0621840 | AT5G16820.2 | 48.889 | 225 | 98 | 3 | 70 | 282 | 2 | 221 | 1.77e-62 | 208 |
| Msa0621840 | AT4G17750.1 | 50.000 | 216 | 82 | 3 | 98 | 292 | 50 | 260 | 5.70e-62 | 207 |
| Msa0621840 | AT1G32330.2 | 46.753 | 231 | 107 | 3 | 87 | 301 | 24 | 254 | 2.94e-61 | 205 |
| Msa0621840 | AT1G32330.1 | 46.753 | 231 | 107 | 3 | 87 | 301 | 24 | 254 | 3.21e-61 | 205 |
| Msa0621840 | AT3G63350.1 | 39.850 | 266 | 150 | 3 | 73 | 329 | 1 | 265 | 4.64e-60 | 196 |
| Msa0621840 | AT3G02990.1 | 51.579 | 190 | 81 | 2 | 99 | 277 | 22 | 211 | 2.72e-57 | 194 |
| Msa0621840 | AT5G43840.1 | 45.503 | 189 | 96 | 1 | 86 | 274 | 5 | 186 | 3.42e-54 | 181 |
| Msa0621840 | AT5G03720.2 | 47.291 | 203 | 101 | 3 | 86 | 282 | 41 | 243 | 5.64e-54 | 184 |
| Msa0621840 | AT5G03720.1 | 47.291 | 203 | 101 | 3 | 86 | 282 | 41 | 243 | 5.64e-54 | 184 |
| Msa0621840 | AT1G67970.1 | 48.108 | 185 | 88 | 2 | 100 | 276 | 19 | 203 | 1.27e-49 | 172 |
| Msa0621840 | AT4G13980.1 | 43.169 | 183 | 101 | 1 | 101 | 280 | 24 | 206 | 5.00e-46 | 164 |
| Msa0621840 | AT3G24520.1 | 41.000 | 200 | 102 | 2 | 100 | 299 | 17 | 200 | 4.55e-43 | 153 |
| Msa0621840 | AT4G18880.1 | 44.865 | 185 | 94 | 2 | 92 | 268 | 7 | 191 | 8.75e-38 | 141 |
| Msa0621840 | AT1G46264.1 | 61.386 | 101 | 39 | 0 | 90 | 190 | 24 | 124 | 1.10e-37 | 139 |
| Msa0621840 | AT5G45710.3 | 41.808 | 177 | 96 | 1 | 99 | 268 | 12 | 188 | 4.29e-37 | 138 |
| Msa0621840 | AT5G45710.1 | 41.808 | 177 | 96 | 1 | 99 | 268 | 12 | 188 | 4.29e-37 | 138 |
| Msa0621840 | AT2G41690.1 | 58.000 | 100 | 42 | 0 | 98 | 197 | 38 | 137 | 1.12e-35 | 131 |
| Msa0621840 | AT4G36990.1 | 62.366 | 93 | 35 | 0 | 98 | 190 | 12 | 104 | 3.59e-35 | 131 |
| Msa0621840 | AT4G11660.1 | 61.290 | 93 | 36 | 0 | 98 | 190 | 57 | 149 | 4.08e-35 | 133 |
| Msa0621840 | AT5G62020.1 | 58.416 | 101 | 41 | 1 | 98 | 198 | 21 | 120 | 6.68e-35 | 130 |
| Msa0621840 | AT2G26150.3 | 34.247 | 219 | 103 | 7 | 126 | 330 | 35 | 226 | 7.21e-27 | 108 |
| Msa0621840 | AT2G26150.2 | 34.247 | 219 | 103 | 7 | 126 | 330 | 35 | 226 | 7.21e-27 | 108 |
| Msa0621840 | AT4G18870.1 | 33.846 | 130 | 76 | 2 | 68 | 187 | 104 | 233 | 3.30e-18 | 84.7 |
| Msa0621840 | AT4G18870.1 | 43.678 | 87 | 48 | 1 | 101 | 187 | 14 | 99 | 2.70e-17 | 82.0 |
| Msa0621840 | AT1G77570.1 | 37.778 | 90 | 53 | 2 | 101 | 187 | 27 | 116 | 2.60e-12 | 64.7 |
| Msa0621840 | AT4G19630.1 | 38.542 | 96 | 52 | 3 | 97 | 187 | 8 | 101 | 2.09e-11 | 61.6 |
Find 76 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCAAAAGGCCATTGTTTA+TGG | 0.168710 | 4_2:-74128896 | Msa0621840:CDS |
| GTACTTAGGAAGAAGAATTT+TGG | 0.203486 | 4_2:+74130076 | None:intergenic |
| GAAACAATCGGGTCAGTTTC+CGG | 0.255207 | 4_2:+74130149 | None:intergenic |
| AGATCAGAACATGTTGAAAT+TGG | 0.272987 | 4_2:-74129037 | Msa0621840:CDS |
| CTCCATAAACAATGGCCTTT+TGG | 0.280439 | 4_2:+74128894 | None:intergenic |
| TGTAACCCTTCCATTGGTTT+AGG | 0.283169 | 4_2:+74130224 | None:intergenic |
| TCTGTCACATGCAGGGGTTT+AGG | 0.362833 | 4_2:-74129224 | Msa0621840:intron |
| CCTTGTGTTCCAAGCAATCT+AGG | 0.385680 | 4_2:+74128808 | None:intergenic |
| CGTTGGGAGTTTGCAAATGA+AGG | 0.392464 | 4_2:-74129186 | Msa0621840:CDS |
| TATTCAACTCACAAATGTTC+AGG | 0.406470 | 4_2:-74128977 | Msa0621840:CDS |
| TAATGTTGATTATAGGAGTC+AGG | 0.409936 | 4_2:-74128782 | Msa0621840:CDS |
| ACAGATTCCACATATGTAAC+AGG | 0.416194 | 4_2:+74128408 | None:intergenic |
| AAACTGACCCGATTGTTTCA+TGG | 0.421449 | 4_2:-74130145 | Msa0621840:CDS |
| GGTGGTTACGACGGTGAAAT+CGG | 0.435742 | 4_2:-74130467 | Msa0621840:CDS |
| GTTTGAAATGGTGGAGGATC+CGG | 0.440036 | 4_2:-74130168 | Msa0621840:CDS |
| GTTAAAAGACCTAGATTGCT+TGG | 0.444562 | 4_2:-74128817 | Msa0621840:CDS |
| AAGGTACTAATGTTGATTAT+AGG | 0.444857 | 4_2:-74128789 | Msa0621840:CDS |
| AAATATGAACACTGGTAGAA+TGG | 0.455673 | 4_2:-74128707 | Msa0621840:CDS |
| GAGCCACTCCATGAAACAAT+CGG | 0.466527 | 4_2:+74130137 | None:intergenic |
| TCTCAAGAAGACGTTTGAAA+TGG | 0.467110 | 4_2:-74130180 | Msa0621840:CDS |
| TCCTCACCAAAATGGCCAAA+AGG | 0.470362 | 4_2:-74128909 | Msa0621840:CDS |
| ACCACCTGTTTCCACTCCTA+TGG | 0.477088 | 4_2:-74128683 | Msa0621840:CDS |
| TAGCTCTTTACATGACTTGA+GGG | 0.478947 | 4_2:-74128647 | Msa0621840:CDS |
| GAAGGTTGATTCAGACCGTT+GGG | 0.482934 | 4_2:-74129202 | Msa0621840:CDS |
| CAAATGAAGGATTTCAAGCA+GGG | 0.484602 | 4_2:-74129173 | Msa0621840:CDS |
| GACTTACATAGGTGTTGAGC+TGG | 0.485810 | 4_2:+74130021 | None:intergenic |
| ATTTGTTGAAGAACATAAGA+AGG | 0.488953 | 4_2:-74129143 | Msa0621840:CDS |
| ACCTCATGTAACCCTTCCAT+TGG | 0.493568 | 4_2:+74130218 | None:intergenic |
| TCTTCCATAGGAGTGGAAAC+AGG | 0.496566 | 4_2:+74128679 | None:intergenic |
| GCACTGTCGTTGAATAACTC+TGG | 0.499469 | 4_2:+74130410 | None:intergenic |
| GCAAATGAAGGATTTCAAGC+AGG | 0.502811 | 4_2:-74129174 | Msa0621840:CDS |
| CCAGAATCCTGTTACATATG+TGG | 0.506965 | 4_2:-74128415 | Msa0621840:intron |
| ATTCAAAAGATTAAGCGAAA+AGG | 0.508398 | 4_2:-74128865 | Msa0621840:CDS |
| TTACATGACTTGAGGGCTTG+TGG | 0.510182 | 4_2:-74128640 | Msa0621840:CDS |
| AACAAAATGGCGGTGGCACA+CGG | 0.510707 | 4_2:-74130488 | None:intergenic |
| ACTTTGCAATCTGAATTGAA+TGG | 0.510922 | 4_2:-74128742 | Msa0621840:CDS |
| TTATTATGCTTAAAGTACTT+AGG | 0.510929 | 4_2:+74130062 | None:intergenic |
| CAAGAAGACGTTTGAAATGG+TGG | 0.512314 | 4_2:-74130177 | Msa0621840:CDS |
| CGCAATTCATATCAAAGAAG+AGG | 0.515252 | 4_2:-74130291 | Msa0621840:CDS |
| GGAAGGTTGATTCAGACCGT+TGG | 0.515312 | 4_2:-74129203 | Msa0621840:CDS |
| TCAAACGTCTTCTTGAGAAA+CGG | 0.525722 | 4_2:+74130185 | None:intergenic |
| AATTGGAAATTCTGAAGCTA+AGG | 0.526195 | 4_2:-74129020 | Msa0621840:CDS |
| TTCGGTTGAAACGTCGTCGT+AGG | 0.530109 | 4_2:+74130370 | None:intergenic |
| GTTTCCACTCCTATGGAAGA+TGG | 0.537583 | 4_2:-74128676 | Msa0621840:CDS |
| GTAGCTCTTTACATGACTTG+AGG | 0.539985 | 4_2:-74128648 | Msa0621840:CDS |
| ACTCAGGTTTCCTAAACCAA+TGG | 0.540511 | 4_2:-74130234 | Msa0621840:CDS |
| AGGTTTCCTAAACCAATGGA+AGG | 0.554746 | 4_2:-74130230 | Msa0621840:CDS |
| AGCCACTCCATGAAACAATC+GGG | 0.558154 | 4_2:+74130138 | None:intergenic |
| TCCACTTCAGATTCAACGCA+AGG | 0.559576 | 4_2:+74129072 | None:intergenic |
| CTTCATTTGCAAACTCCCAA+CGG | 0.561522 | 4_2:+74129187 | None:intergenic |
| GACCCGATTGTTTCATGGAG+TGG | 0.564406 | 4_2:-74130140 | Msa0621840:CDS |
| CCTAGATTGCTTGGAACACA+AGG | 0.567220 | 4_2:-74128808 | Msa0621840:CDS |
| ACAAATAAACAAAATGGCGG+TGG | 0.567551 | 4_2:-74130495 | None:intergenic |
| TCACATGCAGGGGTTTAGGA+AGG | 0.572288 | 4_2:-74129220 | Msa0621840:intron |
| CTACGCAGTCCATCTTCCAT+AGG | 0.572989 | 4_2:+74128667 | None:intergenic |
| AAGTATAACAAACTGCATCA+AGG | 0.578236 | 4_2:-74129114 | Msa0621840:CDS |
| AATGTTGATTATAGGAGTCA+GGG | 0.582952 | 4_2:-74128781 | Msa0621840:CDS |
| TTTCCTGAAAATATGAACAC+TGG | 0.585214 | 4_2:-74128715 | Msa0621840:CDS |
| CTAACGCTTCATCTTCACTC+AGG | 0.586633 | 4_2:-74130250 | Msa0621840:CDS |
| GTCTTCTTGAGAAACGGTGG+TGG | 0.589533 | 4_2:+74130191 | None:intergenic |
| CAGTCCATCTTCCATAGGAG+TGG | 0.594383 | 4_2:+74128672 | None:intergenic |
| ATGGAAGGGTTACATGAGGT+TGG | 0.601818 | 4_2:-74130215 | Msa0621840:CDS |
| TCCTTGCGTTGAATCTGAAG+TGG | 0.604555 | 4_2:-74129073 | Msa0621840:CDS |
| GAAGAGGTTCTTGAAGAAGA+CGG | 0.609483 | 4_2:-74130275 | Msa0621840:CDS |
| ATTATCTGCTCCATAAACAA+TGG | 0.622243 | 4_2:+74128886 | None:intergenic |
| GGTTTCCTAAACCAATGGAA+GGG | 0.633308 | 4_2:-74130229 | Msa0621840:CDS |
| GAAGACGTTTGAAATGGTGG+AGG | 0.633963 | 4_2:-74130174 | Msa0621840:CDS |
| CATGACTTGAGGGCTTGTGG+TGG | 0.643012 | 4_2:-74128637 | Msa0621840:CDS |
| GTGGCACACGGTGGTTACGA+CGG | 0.645161 | 4_2:-74130476 | Msa0621840:CDS |
| AACGTCTTCTTGAGAAACGG+TGG | 0.656391 | 4_2:+74130188 | None:intergenic |
| ACCAATGGAAGGGTTACATG+AGG | 0.667282 | 4_2:-74130219 | Msa0621840:CDS |
| TCCATAGGAGTGGAAACAGG+TGG | 0.685790 | 4_2:+74128682 | None:intergenic |
| GGTTACGACGGTGAAATCGG+TGG | 0.688203 | 4_2:-74130464 | Msa0621840:CDS |
| AGTTGATGCTAATATAGACA+TGG | 0.689403 | 4_2:-74128839 | Msa0621840:CDS |
| TATAACAAACTGCATCAAGG+AGG | 0.715319 | 4_2:-74129111 | Msa0621840:CDS |
| AAAATGGCGGTGGCACACGG+TGG | 0.747694 | 4_2:-74130485 | Msa0621840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATGATTCATATTTAT+AGG | - | chr4_2:74128973-74128992 | Msa0621840:CDS | 10.0% |
| !! | TAAAATGATTCATATTTATA+GGG | - | chr4_2:74128974-74128993 | Msa0621840:CDS | 10.0% |
| !! | ATAAAATGATTCATATTTAT+AGG | - | chr4_2:74128973-74128992 | Msa0621840:CDS | 10.0% |
| !! | TAAAATGATTCATATTTATA+GGG | - | chr4_2:74128974-74128993 | Msa0621840:CDS | 10.0% |
| !!! | TTTTTTCATGTTTTTTTACA+TGG | + | chr4_2:74129275-74129294 | None:intergenic | 15.0% |
| !!! | GTATTAAAGTTTTAACAAAA+TGG | + | chr4_2:74130462-74130481 | None:intergenic | 15.0% |
| !!! | TTTTTTCATGTTTTTTTACA+TGG | + | chr4_2:74129275-74129294 | None:intergenic | 15.0% |
| !!! | GTATTAAAGTTTTAACAAAA+TGG | + | chr4_2:74130462-74130481 | None:intergenic | 15.0% |
| !!! | TTATTATGCTTAAAGTACTT+AGG | + | chr4_2:74128749-74128768 | None:intergenic | 20.0% |
| !!! | AGAATTTTTTTGACTTACAT+AGG | + | chr4_2:74128801-74128820 | None:intergenic | 20.0% |
| !!! | TGTACAATTTAAATCAGTTT+TGG | - | chr4_2:74128863-74128882 | Msa0621840:CDS | 20.0% |
| !! | AAATCCAGAATAAATTCAAA+TGG | + | chr4_2:74129328-74129347 | None:intergenic | 20.0% |
| !!! | GCAAAAAACAAAATAGATTT+TGG | + | chr4_2:74129407-74129426 | None:intergenic | 20.0% |
| !! | ATCTGTTCTTAATAAAAATC+TGG | - | chr4_2:74130417-74130436 | Msa0621840:CDS | 20.0% |
| !!! | TTATTATGCTTAAAGTACTT+AGG | + | chr4_2:74128749-74128768 | None:intergenic | 20.0% |
| !!! | AGAATTTTTTTGACTTACAT+AGG | + | chr4_2:74128801-74128820 | None:intergenic | 20.0% |
| !!! | TGTACAATTTAAATCAGTTT+TGG | - | chr4_2:74128863-74128882 | Msa0621840:CDS | 20.0% |
| !! | AAATCCAGAATAAATTCAAA+TGG | + | chr4_2:74129328-74129347 | None:intergenic | 20.0% |
| !!! | GCAAAAAACAAAATAGATTT+TGG | + | chr4_2:74129407-74129426 | None:intergenic | 20.0% |
| !! | ATCTGTTCTTAATAAAAATC+TGG | - | chr4_2:74130417-74130436 | Msa0621840:CDS | 20.0% |
| !!! | ATAACTCTGGTTTTATTGAT+GGG | + | chr4_2:74128388-74128407 | None:intergenic | 25.0% |
| !!! | AATAACTCTGGTTTTATTGA+TGG | + | chr4_2:74128389-74128408 | None:intergenic | 25.0% |
| !!! | TAGTACTGATTCTTTTCTTT+CGG | + | chr4_2:74128459-74128478 | None:intergenic | 25.0% |
| !!! | TTACATGAACTCACTTTTAT+AGG | - | chr4_2:74129179-74129198 | Msa0621840:CDS | 25.0% |
| ! | ACATTAAATTCGAACTTCAT+TGG | - | chr4_2:74129220-74129239 | Msa0621840:intron | 25.0% |
| !!! | TTTTTTGCAACCACAAAAAT+AGG | - | chr4_2:74129419-74129438 | Msa0621840:intron | 25.0% |
| !! | ATTTGTTGAAGAACATAAGA+AGG | - | chr4_2:74129665-74129684 | Msa0621840:intron | 25.0% |
| ! | ATTCAAAAGATTAAGCGAAA+AGG | - | chr4_2:74129943-74129962 | Msa0621840:intron | 25.0% |
| !! | AAGGTACTAATGTTGATTAT+AGG | - | chr4_2:74130019-74130038 | Msa0621840:intron | 25.0% |
| ! | NNNNCAATATATGGGTGAAA+TGG | - | chr4_2:74130307-74130326 | Msa0621840:CDS | 25.0% |
| ! | GTTCTTAATAAAAATCTGGT+TGG | - | chr4_2:74130421-74130440 | Msa0621840:CDS | 25.0% |
| !!! | AGTTTTAACAAAATGGCAAA+TGG | + | chr4_2:74130455-74130474 | None:intergenic | 25.0% |
| !!! | ATAACTCTGGTTTTATTGAT+GGG | + | chr4_2:74128388-74128407 | None:intergenic | 25.0% |
| !!! | AATAACTCTGGTTTTATTGA+TGG | + | chr4_2:74128389-74128408 | None:intergenic | 25.0% |
| !!! | TAGTACTGATTCTTTTCTTT+CGG | + | chr4_2:74128459-74128478 | None:intergenic | 25.0% |
| !!! | TTACATGAACTCACTTTTAT+AGG | - | chr4_2:74129179-74129198 | Msa0621840:CDS | 25.0% |
| ! | ACATTAAATTCGAACTTCAT+TGG | - | chr4_2:74129220-74129239 | Msa0621840:intron | 25.0% |
| !!! | TTTTTTGCAACCACAAAAAT+AGG | - | chr4_2:74129419-74129438 | Msa0621840:intron | 25.0% |
| !! | ATTTGTTGAAGAACATAAGA+AGG | - | chr4_2:74129665-74129684 | Msa0621840:intron | 25.0% |
| ! | ATTCAAAAGATTAAGCGAAA+AGG | - | chr4_2:74129943-74129962 | Msa0621840:intron | 25.0% |
| !! | AAGGTACTAATGTTGATTAT+AGG | - | chr4_2:74130019-74130038 | Msa0621840:intron | 25.0% |
| ! | NNNNCAATATATGGGTGAAA+TGG | - | chr4_2:74130307-74130326 | Msa0621840:CDS | 25.0% |
| ! | GTTCTTAATAAAAATCTGGT+TGG | - | chr4_2:74130421-74130440 | Msa0621840:CDS | 25.0% |
| !!! | AGTTTTAACAAAATGGCAAA+TGG | + | chr4_2:74130455-74130474 | None:intergenic | 25.0% |
| !!! | TCGTGATAGTTTTGTTGTTT+GGG | - | chr4_2:74128694-74128713 | Msa0621840:CDS | 30.0% |
| ! | GTACTTAGGAAGAAGAATTT+TGG | + | chr4_2:74128735-74128754 | None:intergenic | 30.0% |
| !! | TTAAATCAGTTTTGGCATCA+CGG | - | chr4_2:74128871-74128890 | Msa0621840:CDS | 30.0% |
| AAATCAACTCAATGCATGTT+TGG | + | chr4_2:74128918-74128937 | None:intergenic | 30.0% | |
| TTCGCCATTTGAATTTATTC+TGG | - | chr4_2:74129321-74129340 | Msa0621840:intron | 30.0% | |
| AAGTATAACAAACTGCATCA+AGG | - | chr4_2:74129694-74129713 | Msa0621840:intron | 30.0% | |
| AGATCAGAACATGTTGAAAT+TGG | - | chr4_2:74129771-74129790 | Msa0621840:intron | 30.0% | |
| !! | AATTGGAAATTCTGAAGCTA+AGG | - | chr4_2:74129788-74129807 | Msa0621840:intron | 30.0% |
| TATTCAACTCACAAATGTTC+AGG | - | chr4_2:74129831-74129850 | Msa0621840:intron | 30.0% | |
| ATTATCTGCTCCATAAACAA+TGG | + | chr4_2:74129925-74129944 | None:intergenic | 30.0% | |
| ! | AGTTGATGCTAATATAGACA+TGG | - | chr4_2:74129969-74129988 | Msa0621840:intron | 30.0% |
| ! | TAATGTTGATTATAGGAGTC+AGG | - | chr4_2:74130026-74130045 | Msa0621840:intron | 30.0% |
| ! | AATGTTGATTATAGGAGTCA+GGG | - | chr4_2:74130027-74130046 | Msa0621840:intron | 30.0% |
| ACTTTGCAATCTGAATTGAA+TGG | - | chr4_2:74130066-74130085 | Msa0621840:CDS | 30.0% | |
| TTTCCTGAAAATATGAACAC+TGG | - | chr4_2:74130093-74130112 | Msa0621840:CDS | 30.0% | |
| AAATATGAACACTGGTAGAA+TGG | - | chr4_2:74130101-74130120 | Msa0621840:CDS | 30.0% | |
| !!! | TCGTGATAGTTTTGTTGTTT+GGG | - | chr4_2:74128694-74128713 | Msa0621840:CDS | 30.0% |
| ! | GTACTTAGGAAGAAGAATTT+TGG | + | chr4_2:74128735-74128754 | None:intergenic | 30.0% |
| !! | TTAAATCAGTTTTGGCATCA+CGG | - | chr4_2:74128871-74128890 | Msa0621840:CDS | 30.0% |
| AAATCAACTCAATGCATGTT+TGG | + | chr4_2:74128918-74128937 | None:intergenic | 30.0% | |
| TTCGCCATTTGAATTTATTC+TGG | - | chr4_2:74129321-74129340 | Msa0621840:intron | 30.0% | |
| AAGTATAACAAACTGCATCA+AGG | - | chr4_2:74129694-74129713 | Msa0621840:intron | 30.0% | |
| AGATCAGAACATGTTGAAAT+TGG | - | chr4_2:74129771-74129790 | Msa0621840:intron | 30.0% | |
| !! | AATTGGAAATTCTGAAGCTA+AGG | - | chr4_2:74129788-74129807 | Msa0621840:intron | 30.0% |
| TATTCAACTCACAAATGTTC+AGG | - | chr4_2:74129831-74129850 | Msa0621840:intron | 30.0% | |
| ATTATCTGCTCCATAAACAA+TGG | + | chr4_2:74129925-74129944 | None:intergenic | 30.0% | |
| ! | AGTTGATGCTAATATAGACA+TGG | - | chr4_2:74129969-74129988 | Msa0621840:intron | 30.0% |
| ! | TAATGTTGATTATAGGAGTC+AGG | - | chr4_2:74130026-74130045 | Msa0621840:intron | 30.0% |
| ! | AATGTTGATTATAGGAGTCA+GGG | - | chr4_2:74130027-74130046 | Msa0621840:intron | 30.0% |
| ACTTTGCAATCTGAATTGAA+TGG | - | chr4_2:74130066-74130085 | Msa0621840:CDS | 30.0% | |
| TTTCCTGAAAATATGAACAC+TGG | - | chr4_2:74130093-74130112 | Msa0621840:CDS | 30.0% | |
| AAATATGAACACTGGTAGAA+TGG | - | chr4_2:74130101-74130120 | Msa0621840:CDS | 30.0% | |
| !!! | CTGGTTTTATTGATGGGATT+AGG | + | chr4_2:74128382-74128401 | None:intergenic | 35.0% |
| ACCTTCTTCTTCTTCTTCTT+CGG | + | chr4_2:74128483-74128502 | None:intergenic | 35.0% | |
| CGCAATTCATATCAAAGAAG+AGG | - | chr4_2:74128517-74128536 | Msa0621840:intron | 35.0% | |
| TCAAACGTCTTCTTGAGAAA+CGG | + | chr4_2:74128626-74128645 | None:intergenic | 35.0% | |
| TCTCAAGAAGACGTTTGAAA+TGG | - | chr4_2:74128628-74128647 | Msa0621840:CDS | 35.0% | |
| !!! | CTCGTGATAGTTTTGTTGTT+TGG | - | chr4_2:74128693-74128712 | Msa0621840:CDS | 35.0% |
| AATGCATGTTTGGTATCATG+TGG | + | chr4_2:74128908-74128927 | None:intergenic | 35.0% | |
| TATAGGGAGCTATGAATGTT+TGG | - | chr4_2:74128990-74129009 | Msa0621840:CDS | 35.0% | |
| !! | ATGTTTGGTTCCTCTTTTAG+AGG | - | chr4_2:74129005-74129024 | Msa0621840:CDS | 35.0% |
| ! | TTCAACATCTCCTCTAAAAG+AGG | + | chr4_2:74129018-74129037 | None:intergenic | 35.0% |
| TTTGCAACCACAAAAATAGG+TGG | - | chr4_2:74129422-74129441 | Msa0621840:intron | 35.0% | |
| !!! | TTAGTCTCCACCTATTTTTG+TGG | + | chr4_2:74129432-74129451 | None:intergenic | 35.0% |
| TTTATGAATCTGTCACATGC+AGG | - | chr4_2:74129576-74129595 | Msa0621840:intron | 35.0% | |
| TTATGAATCTGTCACATGCA+GGG | - | chr4_2:74129577-74129596 | Msa0621840:intron | 35.0% | |
| CAAATGAAGGATTTCAAGCA+GGG | - | chr4_2:74129635-74129654 | Msa0621840:intron | 35.0% | |
| TATAACAAACTGCATCAAGG+AGG | - | chr4_2:74129697-74129716 | Msa0621840:intron | 35.0% | |
| !!! | GCTATTTTTCCTCACCAAAA+TGG | - | chr4_2:74129891-74129910 | Msa0621840:intron | 35.0% |
| GTTAAAAGACCTAGATTGCT+TGG | - | chr4_2:74129991-74130010 | Msa0621840:intron | 35.0% | |
| ! | CTACCAGTGTTCATATTTTC+AGG | + | chr4_2:74130099-74130118 | None:intergenic | 35.0% |
| TAGCTCTTTACATGACTTGA+GGG | - | chr4_2:74130161-74130180 | Msa0621840:CDS | 35.0% | |
| CTTCGTGCAAATTACAAATC+TGG | + | chr4_2:74130364-74130383 | None:intergenic | 35.0% | |
| ACAGATTCCACATATGTAAC+AGG | + | chr4_2:74130403-74130422 | None:intergenic | 35.0% | |
| !!! | CTGGTTTTATTGATGGGATT+AGG | + | chr4_2:74128382-74128401 | None:intergenic | 35.0% |
| ACCTTCTTCTTCTTCTTCTT+CGG | + | chr4_2:74128483-74128502 | None:intergenic | 35.0% | |
| CGCAATTCATATCAAAGAAG+AGG | - | chr4_2:74128517-74128536 | Msa0621840:intron | 35.0% | |
| TCAAACGTCTTCTTGAGAAA+CGG | + | chr4_2:74128626-74128645 | None:intergenic | 35.0% | |
| TCTCAAGAAGACGTTTGAAA+TGG | - | chr4_2:74128628-74128647 | Msa0621840:CDS | 35.0% | |
| !!! | CTCGTGATAGTTTTGTTGTT+TGG | - | chr4_2:74128693-74128712 | Msa0621840:CDS | 35.0% |
| AATGCATGTTTGGTATCATG+TGG | + | chr4_2:74128908-74128927 | None:intergenic | 35.0% | |
| TATAGGGAGCTATGAATGTT+TGG | - | chr4_2:74128990-74129009 | Msa0621840:CDS | 35.0% | |
| !! | ATGTTTGGTTCCTCTTTTAG+AGG | - | chr4_2:74129005-74129024 | Msa0621840:CDS | 35.0% |
| ! | TTCAACATCTCCTCTAAAAG+AGG | + | chr4_2:74129018-74129037 | None:intergenic | 35.0% |
| TTTGCAACCACAAAAATAGG+TGG | - | chr4_2:74129422-74129441 | Msa0621840:intron | 35.0% | |
| !!! | TTAGTCTCCACCTATTTTTG+TGG | + | chr4_2:74129432-74129451 | None:intergenic | 35.0% |
| TTTATGAATCTGTCACATGC+AGG | - | chr4_2:74129576-74129595 | Msa0621840:intron | 35.0% | |
| TTATGAATCTGTCACATGCA+GGG | - | chr4_2:74129577-74129596 | Msa0621840:intron | 35.0% | |
| CAAATGAAGGATTTCAAGCA+GGG | - | chr4_2:74129635-74129654 | Msa0621840:intron | 35.0% | |
| TATAACAAACTGCATCAAGG+AGG | - | chr4_2:74129697-74129716 | Msa0621840:intron | 35.0% | |
| !!! | GCTATTTTTCCTCACCAAAA+TGG | - | chr4_2:74129891-74129910 | Msa0621840:intron | 35.0% |
| GTTAAAAGACCTAGATTGCT+TGG | - | chr4_2:74129991-74130010 | Msa0621840:intron | 35.0% | |
| ! | CTACCAGTGTTCATATTTTC+AGG | + | chr4_2:74130099-74130118 | None:intergenic | 35.0% |
| TAGCTCTTTACATGACTTGA+GGG | - | chr4_2:74130161-74130180 | Msa0621840:CDS | 35.0% | |
| CTTCGTGCAAATTACAAATC+TGG | + | chr4_2:74130364-74130383 | None:intergenic | 35.0% | |
| ACAGATTCCACATATGTAAC+AGG | + | chr4_2:74130403-74130422 | None:intergenic | 35.0% | |
| ACCGAAGAAGAAGAAGAAGA+AGG | - | chr4_2:74128479-74128498 | Msa0621840:intron | 40.0% | |
| GAAGAGGTTCTTGAAGAAGA+CGG | - | chr4_2:74128533-74128552 | Msa0621840:intron | 40.0% | |
| ACTCAGGTTTCCTAAACCAA+TGG | - | chr4_2:74128574-74128593 | Msa0621840:intron | 40.0% | |
| AGGTTTCCTAAACCAATGGA+AGG | - | chr4_2:74128578-74128597 | Msa0621840:intron | 40.0% | |
| GGTTTCCTAAACCAATGGAA+GGG | - | chr4_2:74128579-74128598 | Msa0621840:intron | 40.0% | |
| !! | TGTAACCCTTCCATTGGTTT+AGG | + | chr4_2:74128587-74128606 | None:intergenic | 40.0% |
| ! | CAAGAAGACGTTTGAAATGG+TGG | - | chr4_2:74128631-74128650 | Msa0621840:CDS | 40.0% |
| AAACTGACCCGATTGTTTCA+TGG | - | chr4_2:74128663-74128682 | Msa0621840:CDS | 40.0% | |
| GGTGGAGACTAAAAATCAAG+AGG | - | chr4_2:74129440-74129459 | Msa0621840:intron | 40.0% | |
| TATGAATCTGTCACATGCAG+GGG | - | chr4_2:74129578-74129597 | Msa0621840:intron | 40.0% | |
| CTTCATTTGCAAACTCCCAA+CGG | + | chr4_2:74129624-74129643 | None:intergenic | 40.0% | |
| GCAAATGAAGGATTTCAAGC+AGG | - | chr4_2:74129634-74129653 | Msa0621840:intron | 40.0% | |
| ! | CTCCATAAACAATGGCCTTT+TGG | + | chr4_2:74129917-74129936 | None:intergenic | 40.0% |
| GTAGCTCTTTACATGACTTG+AGG | - | chr4_2:74130160-74130179 | Msa0621840:CDS | 40.0% | |
| !! | AATCTGGCAGACTTGTTAGA+TGG | + | chr4_2:74130348-74130367 | None:intergenic | 40.0% |
| CCACATATGTAACAGGATTC+TGG | + | chr4_2:74130396-74130415 | None:intergenic | 40.0% | |
| CCAGAATCCTGTTACATATG+TGG | - | chr4_2:74130393-74130412 | Msa0621840:CDS | 40.0% | |
| ACCGAAGAAGAAGAAGAAGA+AGG | - | chr4_2:74128479-74128498 | Msa0621840:intron | 40.0% | |
| GAAGAGGTTCTTGAAGAAGA+CGG | - | chr4_2:74128533-74128552 | Msa0621840:intron | 40.0% | |
| ACTCAGGTTTCCTAAACCAA+TGG | - | chr4_2:74128574-74128593 | Msa0621840:intron | 40.0% | |
| AGGTTTCCTAAACCAATGGA+AGG | - | chr4_2:74128578-74128597 | Msa0621840:intron | 40.0% | |
| GGTTTCCTAAACCAATGGAA+GGG | - | chr4_2:74128579-74128598 | Msa0621840:intron | 40.0% | |
| !! | TGTAACCCTTCCATTGGTTT+AGG | + | chr4_2:74128587-74128606 | None:intergenic | 40.0% |
| ! | CAAGAAGACGTTTGAAATGG+TGG | - | chr4_2:74128631-74128650 | Msa0621840:CDS | 40.0% |
| AAACTGACCCGATTGTTTCA+TGG | - | chr4_2:74128663-74128682 | Msa0621840:CDS | 40.0% | |
| GGTGGAGACTAAAAATCAAG+AGG | - | chr4_2:74129440-74129459 | Msa0621840:intron | 40.0% | |
| TATGAATCTGTCACATGCAG+GGG | - | chr4_2:74129578-74129597 | Msa0621840:intron | 40.0% | |
| CTTCATTTGCAAACTCCCAA+CGG | + | chr4_2:74129624-74129643 | None:intergenic | 40.0% | |
| GCAAATGAAGGATTTCAAGC+AGG | - | chr4_2:74129634-74129653 | Msa0621840:intron | 40.0% | |
| ! | CTCCATAAACAATGGCCTTT+TGG | + | chr4_2:74129917-74129936 | None:intergenic | 40.0% |
| GTAGCTCTTTACATGACTTG+AGG | - | chr4_2:74130160-74130179 | Msa0621840:CDS | 40.0% | |
| !! | AATCTGGCAGACTTGTTAGA+TGG | + | chr4_2:74130348-74130367 | None:intergenic | 40.0% |
| CCACATATGTAACAGGATTC+TGG | + | chr4_2:74130396-74130415 | None:intergenic | 40.0% | |
| CCAGAATCCTGTTACATATG+TGG | - | chr4_2:74130393-74130412 | Msa0621840:CDS | 40.0% | |
| GCACTGTCGTTGAATAACTC+TGG | + | chr4_2:74128401-74128420 | None:intergenic | 45.0% | |
| CTAACGCTTCATCTTCACTC+AGG | - | chr4_2:74128558-74128577 | Msa0621840:intron | 45.0% | |
| ACCAATGGAAGGGTTACATG+AGG | - | chr4_2:74128589-74128608 | Msa0621840:intron | 45.0% | |
| ACCTCATGTAACCCTTCCAT+TGG | + | chr4_2:74128593-74128612 | None:intergenic | 45.0% | |
| ATGGAAGGGTTACATGAGGT+TGG | - | chr4_2:74128593-74128612 | Msa0621840:intron | 45.0% | |
| AACGTCTTCTTGAGAAACGG+TGG | + | chr4_2:74128623-74128642 | None:intergenic | 45.0% | |
| ! | GAAGACGTTTGAAATGGTGG+AGG | - | chr4_2:74128634-74128653 | Msa0621840:CDS | 45.0% |
| ! | GTTTGAAATGGTGGAGGATC+CGG | - | chr4_2:74128640-74128659 | Msa0621840:CDS | 45.0% |
| GAAACAATCGGGTCAGTTTC+CGG | + | chr4_2:74128662-74128681 | None:intergenic | 45.0% | |
| AGCCACTCCATGAAACAATC+GGG | + | chr4_2:74128673-74128692 | None:intergenic | 45.0% | |
| GAGCCACTCCATGAAACAAT+CGG | + | chr4_2:74128674-74128693 | None:intergenic | 45.0% | |
| !! | GACTTACATAGGTGTTGAGC+TGG | + | chr4_2:74128790-74128809 | None:intergenic | 45.0% |
| ! | GAAGGTTGATTCAGACCGTT+GGG | - | chr4_2:74129606-74129625 | Msa0621840:intron | 45.0% |
| CGTTGGGAGTTTGCAAATGA+AGG | - | chr4_2:74129622-74129641 | Msa0621840:intron | 45.0% | |
| TCCTTGCGTTGAATCTGAAG+TGG | - | chr4_2:74129735-74129754 | Msa0621840:intron | 45.0% | |
| TCCACTTCAGATTCAACGCA+AGG | + | chr4_2:74129739-74129758 | None:intergenic | 45.0% | |
| TCCTCACCAAAATGGCCAAA+AGG | - | chr4_2:74129899-74129918 | Msa0621840:intron | 45.0% | |
| ! | CAATGGCCTTTTGGCCATTT+TGG | + | chr4_2:74129908-74129927 | None:intergenic | 45.0% |
| GGCCAAAAGGCCATTGTTTA+TGG | - | chr4_2:74129912-74129931 | Msa0621840:intron | 45.0% | |
| CCTTGTGTTCCAAGCAATCT+AGG | + | chr4_2:74130003-74130022 | None:intergenic | 45.0% | |
| CCTAGATTGCTTGGAACACA+AGG | - | chr4_2:74130000-74130019 | Msa0621840:intron | 45.0% | |
| TCTTCCATAGGAGTGGAAAC+AGG | + | chr4_2:74130132-74130151 | None:intergenic | 45.0% | |
| GTTTCCACTCCTATGGAAGA+TGG | - | chr4_2:74130132-74130151 | Msa0621840:CDS | 45.0% | |
| TTACATGACTTGAGGGCTTG+TGG | - | chr4_2:74130168-74130187 | Msa0621840:CDS | 45.0% | |
| GCACTGTCGTTGAATAACTC+TGG | + | chr4_2:74128401-74128420 | None:intergenic | 45.0% | |
| CTAACGCTTCATCTTCACTC+AGG | - | chr4_2:74128558-74128577 | Msa0621840:intron | 45.0% | |
| ACCAATGGAAGGGTTACATG+AGG | - | chr4_2:74128589-74128608 | Msa0621840:intron | 45.0% | |
| ACCTCATGTAACCCTTCCAT+TGG | + | chr4_2:74128593-74128612 | None:intergenic | 45.0% | |
| ATGGAAGGGTTACATGAGGT+TGG | - | chr4_2:74128593-74128612 | Msa0621840:intron | 45.0% | |
| AACGTCTTCTTGAGAAACGG+TGG | + | chr4_2:74128623-74128642 | None:intergenic | 45.0% | |
| ! | GAAGACGTTTGAAATGGTGG+AGG | - | chr4_2:74128634-74128653 | Msa0621840:CDS | 45.0% |
| ! | GTTTGAAATGGTGGAGGATC+CGG | - | chr4_2:74128640-74128659 | Msa0621840:CDS | 45.0% |
| GAAACAATCGGGTCAGTTTC+CGG | + | chr4_2:74128662-74128681 | None:intergenic | 45.0% | |
| AGCCACTCCATGAAACAATC+GGG | + | chr4_2:74128673-74128692 | None:intergenic | 45.0% | |
| GAGCCACTCCATGAAACAAT+CGG | + | chr4_2:74128674-74128693 | None:intergenic | 45.0% | |
| !! | GACTTACATAGGTGTTGAGC+TGG | + | chr4_2:74128790-74128809 | None:intergenic | 45.0% |
| ! | GAAGGTTGATTCAGACCGTT+GGG | - | chr4_2:74129606-74129625 | Msa0621840:intron | 45.0% |
| CGTTGGGAGTTTGCAAATGA+AGG | - | chr4_2:74129622-74129641 | Msa0621840:intron | 45.0% | |
| TCCTTGCGTTGAATCTGAAG+TGG | - | chr4_2:74129735-74129754 | Msa0621840:intron | 45.0% | |
| TCCACTTCAGATTCAACGCA+AGG | + | chr4_2:74129739-74129758 | None:intergenic | 45.0% | |
| TCCTCACCAAAATGGCCAAA+AGG | - | chr4_2:74129899-74129918 | Msa0621840:intron | 45.0% | |
| ! | CAATGGCCTTTTGGCCATTT+TGG | + | chr4_2:74129908-74129927 | None:intergenic | 45.0% |
| GGCCAAAAGGCCATTGTTTA+TGG | - | chr4_2:74129912-74129931 | Msa0621840:intron | 45.0% | |
| CCTTGTGTTCCAAGCAATCT+AGG | + | chr4_2:74130003-74130022 | None:intergenic | 45.0% | |
| CCTAGATTGCTTGGAACACA+AGG | - | chr4_2:74130000-74130019 | Msa0621840:intron | 45.0% | |
| TCTTCCATAGGAGTGGAAAC+AGG | + | chr4_2:74130132-74130151 | None:intergenic | 45.0% | |
| GTTTCCACTCCTATGGAAGA+TGG | - | chr4_2:74130132-74130151 | Msa0621840:CDS | 45.0% | |
| TTACATGACTTGAGGGCTTG+TGG | - | chr4_2:74130168-74130187 | Msa0621840:CDS | 45.0% | |
| GGTGGTTACGACGGTGAAAT+CGG | - | chr4_2:74128341-74128360 | Msa0621840:CDS | 50.0% | |
| TTCGGTTGAAACGTCGTCGT+AGG | + | chr4_2:74128441-74128460 | None:intergenic | 50.0% | |
| GTCTTCTTGAGAAACGGTGG+TGG | + | chr4_2:74128620-74128639 | None:intergenic | 50.0% | |
| GACCCGATTGTTTCATGGAG+TGG | - | chr4_2:74128668-74128687 | Msa0621840:CDS | 50.0% | |
| TCTGTCACATGCAGGGGTTT+AGG | - | chr4_2:74129584-74129603 | Msa0621840:intron | 50.0% | |
| TCACATGCAGGGGTTTAGGA+AGG | - | chr4_2:74129588-74129607 | Msa0621840:intron | 50.0% | |
| ! | GGAAGGTTGATTCAGACCGT+TGG | - | chr4_2:74129605-74129624 | Msa0621840:intron | 50.0% |
| !! | GCCTTTTGGCCATTTTGGTG+AGG | + | chr4_2:74129903-74129922 | None:intergenic | 50.0% |
| ACCACCTGTTTCCACTCCTA+TGG | - | chr4_2:74130125-74130144 | Msa0621840:CDS | 50.0% | |
| TCCATAGGAGTGGAAACAGG+TGG | + | chr4_2:74130129-74130148 | None:intergenic | 50.0% | |
| CAGTCCATCTTCCATAGGAG+TGG | + | chr4_2:74130139-74130158 | None:intergenic | 50.0% | |
| CTACGCAGTCCATCTTCCAT+AGG | + | chr4_2:74130144-74130163 | None:intergenic | 50.0% | |
| GGTGGTTACGACGGTGAAAT+CGG | - | chr4_2:74128341-74128360 | Msa0621840:CDS | 50.0% | |
| TTCGGTTGAAACGTCGTCGT+AGG | + | chr4_2:74128441-74128460 | None:intergenic | 50.0% | |
| GTCTTCTTGAGAAACGGTGG+TGG | + | chr4_2:74128620-74128639 | None:intergenic | 50.0% | |
| GACCCGATTGTTTCATGGAG+TGG | - | chr4_2:74128668-74128687 | Msa0621840:CDS | 50.0% | |
| TCTGTCACATGCAGGGGTTT+AGG | - | chr4_2:74129584-74129603 | Msa0621840:intron | 50.0% | |
| TCACATGCAGGGGTTTAGGA+AGG | - | chr4_2:74129588-74129607 | Msa0621840:intron | 50.0% | |
| ! | GGAAGGTTGATTCAGACCGT+TGG | - | chr4_2:74129605-74129624 | Msa0621840:intron | 50.0% |
| !! | GCCTTTTGGCCATTTTGGTG+AGG | + | chr4_2:74129903-74129922 | None:intergenic | 50.0% |
| ACCACCTGTTTCCACTCCTA+TGG | - | chr4_2:74130125-74130144 | Msa0621840:CDS | 50.0% | |
| TCCATAGGAGTGGAAACAGG+TGG | + | chr4_2:74130129-74130148 | None:intergenic | 50.0% | |
| CAGTCCATCTTCCATAGGAG+TGG | + | chr4_2:74130139-74130158 | None:intergenic | 50.0% | |
| CTACGCAGTCCATCTTCCAT+AGG | + | chr4_2:74130144-74130163 | None:intergenic | 50.0% | |
| GGTTACGACGGTGAAATCGG+TGG | - | chr4_2:74128344-74128363 | Msa0621840:CDS | 55.0% | |
| CATGACTTGAGGGCTTGTGG+TGG | - | chr4_2:74130171-74130190 | Msa0621840:CDS | 55.0% | |
| GGTTACGACGGTGAAATCGG+TGG | - | chr4_2:74128344-74128363 | Msa0621840:CDS | 55.0% | |
| CATGACTTGAGGGCTTGTGG+TGG | - | chr4_2:74130171-74130190 | Msa0621840:CDS | 55.0% | |
| GTGGCACACGGTGGTTACGA+CGG | - | chr4_2:74128332-74128351 | Msa0621840:CDS | 60.0% | |
| GTGGCACACGGTGGTTACGA+CGG | - | chr4_2:74128332-74128351 | Msa0621840:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 74128326 | 74130504 | 74128326 | ID=Msa0621840;Name=Msa0621840 |
| chr4_2 | mRNA | 74128326 | 74130504 | 74128326 | ID=Msa0621840-mRNA-1;Parent=Msa0621840;Name=Msa0621840-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|0.66|1|1|3|0|397 |
| chr4_2 | exon | 74130028 | 74130504 | 74130028 | ID=Msa0621840-mRNA-1:exon:22323;Parent=Msa0621840-mRNA-1 |
| chr4_2 | exon | 74128624 | 74129232 | 74128624 | ID=Msa0621840-mRNA-1:exon:22322;Parent=Msa0621840-mRNA-1 |
| chr4_2 | exon | 74128326 | 74128433 | 74128326 | ID=Msa0621840-mRNA-1:exon:22321;Parent=Msa0621840-mRNA-1 |
| chr4_2 | CDS | 74130028 | 74130504 | 74130028 | ID=Msa0621840-mRNA-1:cds;Parent=Msa0621840-mRNA-1 |
| chr4_2 | CDS | 74128624 | 74129232 | 74128624 | ID=Msa0621840-mRNA-1:cds;Parent=Msa0621840-mRNA-1 |
| chr4_2 | CDS | 74128326 | 74128433 | 74128326 | ID=Msa0621840-mRNA-1:cds;Parent=Msa0621840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
