AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0005270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0005270 MtrunA17_Chr1g0159571 94.715 246 8 2 1 244 1 243 1.81e-169 468
Msa0005270 MtrunA17_Chr3g0125561 36.481 233 117 8 1 221 31 244 1.93e-19 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0005270 AT1G76980.1 40.609 197 88 9 26 204 13 198 1.30e-29 112
Msa0005270 AT1G76980.2 40.609 197 88 9 26 204 13 198 2.76e-29 111
Msa0005270 AT1G21390.1 41.765 170 79 5 47 199 26 192 3.72e-27 105

Find 50 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATGTGTTCACCACCTTTA+TGG 0.137469 1_1:+7722830 Msa0005270:CDS
TTAGATGATCCCAAAGAAAT+TGG 0.202956 1_1:-7723144 None:intergenic
TGATAAGAAGAAAGAGTTAT+TGG 0.226827 1_1:+7723173 Msa0005270:CDS
AAGAGGTCAAAGAGAGTTAA+TGG 0.266398 1_1:+7722918 Msa0005270:CDS
ATGGCTTGTGTCTTTGATTC+AGG 0.274722 1_1:-7722892 None:intergenic
GTAAGTTCATAGCTTGATTC+TGG 0.277190 1_1:-7722958 None:intergenic
TTATTCTTTGTTGTCCATAA+AGG 0.353698 1_1:-7722844 None:intergenic
TGTATTCTATCATCAGAAAC+TGG 0.389778 1_1:-7722730 None:intergenic
CTCTCTTTGACCTCTTTCAA+TGG 0.402619 1_1:-7722911 None:intergenic
TTCTGATGGATCTGTTAGTA+AGG 0.426899 1_1:+7723245 Msa0005270:CDS
GGATTGGTGGAAGAAGAAAC+TGG 0.436996 1_1:+7723266 Msa0005270:CDS
TCAAAGAGAGTTAATGGAAA+TGG 0.447636 1_1:+7722924 Msa0005270:CDS
CAACATGTTGAAGATGAATC+TGG 0.475461 1_1:+7722808 Msa0005270:CDS
AGTGGTAGCATCAAAAGATA+TGG 0.478211 1_1:+7723348 Msa0005270:CDS
AAGAAATTGTGGGTTGGTAA+TGG 0.479830 1_1:-7722705 None:intergenic
CCAAGAGCATCTGTTTCTGA+TGG 0.489074 1_1:+7723231 Msa0005270:CDS
ACTCCTGCTGCTACAACTAC+TGG 0.490793 1_1:-7723382 None:intergenic
AGAAACTGGAAAAGAAATTG+TGG 0.502575 1_1:-7722716 None:intergenic
GAACCAGTAGTTGTAGCAGC+AGG 0.516769 1_1:+7723379 Msa0005270:CDS
GATCTGTTAGTAAGGATTGG+TGG 0.520890 1_1:+7723253 Msa0005270:CDS
TAAAAGTAGTAGTAATTCAA+AGG 0.523482 1_1:+7723203 Msa0005270:CDS
CACCTTTCAATGTGTTGTAG+TGG 0.525522 1_1:+7722505 Msa0005270:five_prime_UTR
GAAACTGGAAAAGAAATTGT+GGG 0.525639 1_1:-7722715 None:intergenic
CAAAGTGAAACATGACTAGC+CGG 0.535783 1_1:-7723670 None:intergenic
TTCTTTGTTGTCCATAAAGG+TGG 0.536559 1_1:-7722841 None:intergenic
AAGACACAAGCCATTGAAAG+AGG 0.538043 1_1:+7722901 Msa0005270:CDS
CCATCAGAAACAGATGCTCT+TGG 0.545084 1_1:-7723231 None:intergenic
AACCACTACAACACATTGAA+AGG 0.548137 1_1:-7722507 None:intergenic
TATTCTAGCGAAGGAGACCC+CGG 0.553212 1_1:+7723651 Msa0005270:CDS
GGGAGTAGTGGTTCAGAATG+TGG 0.556003 1_1:+7723288 Msa0005270:CDS
AATTAGGGCTAGTAGAAATG+TGG 0.563530 1_1:+7723074 Msa0005270:CDS
AAAATAACAAGGTAAAAGAG+AGG 0.570398 1_1:+7723016 Msa0005270:CDS
CTGGAAAAGAAATTGTGGGT+TGG 0.579799 1_1:-7722711 None:intergenic
GTAGCAGCAGGAGTAATAGC+AGG 0.581217 1_1:+7723391 Msa0005270:CDS
AGAAGAATATTGACAGTGGA+GGG 0.588979 1_1:+7723100 Msa0005270:CDS
ATGGATCTGTTAGTAAGGAT+TGG 0.591287 1_1:+7723250 Msa0005270:CDS
GGTTGGTAATGGTATCTTCG+TGG 0.594866 1_1:-7722694 None:intergenic
AAGAAGAAACTGGGGAGTAG+TGG 0.594902 1_1:+7723276 Msa0005270:CDS
GATTGGTGGAAGAAGAAACT+GGG 0.596215 1_1:+7723267 Msa0005270:CDS
AAAGTGAAACATGACTAGCC+GGG 0.607958 1_1:-7723669 None:intergenic
ATTGACTCGTATTCTAGCGA+AGG 0.610173 1_1:+7723642 Msa0005270:CDS
AAGAAGAATATTGACAGTGG+AGG 0.610321 1_1:+7723099 Msa0005270:CDS
GATAAGAAGAATATTGACAG+TGG 0.625867 1_1:+7723096 Msa0005270:CDS
TACTTTGAAAGATCTTGTTG+AGG 0.634719 1_1:+7722978 Msa0005270:CDS
AGTGGTGTATCTAGCATGAG+TGG 0.636022 1_1:+7723330 Msa0005270:CDS
AAGTGAAACATGACTAGCCG+GGG 0.647231 1_1:-7723668 None:intergenic
ATTGGTGGAAGAAGAAACTG+GGG 0.670609 1_1:+7723268 Msa0005270:CDS
AGTAGTGGTTCAGAATGTGG+AGG 0.678513 1_1:+7723291 Msa0005270:CDS
TCATGTTGAAGAAAATAACA+AGG 0.690119 1_1:+7723005 Msa0005270:CDS
GGTGATCAAAGTGATCATAG+TGG 0.721338 1_1:+7723312 Msa0005270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATATATAAATGTTTGAA+TGG + chr1_1:7723473-7723492 Msa0005270:intron 10.0%
!! TTTATATATAAATGTTTGAA+TGG + chr1_1:7723473-7723492 Msa0005270:intron 10.0%
!!! TTTATAACATATGCTTTTTT+TGG - chr1_1:7722649-7722668 None:intergenic 15.0%
!! TTGAAAGGAAAAAAAAAAAA+AGG - chr1_1:7723587-7723606 None:intergenic 15.0%
!!! TTTATAACATATGCTTTTTT+TGG - chr1_1:7722649-7722668 None:intergenic 15.0%
!! TTGAAAGGAAAAAAAAAAAA+AGG - chr1_1:7723587-7723606 None:intergenic 15.0%
!!! ATGAAGCTTTTTTAATTTCT+TGG - chr1_1:7722482-7722501 None:intergenic 20.0%
!!! TTTTGAAAGATTTTGAAAGA+GGG - chr1_1:7722580-7722599 None:intergenic 20.0%
!!! AATGATTTTTCCAATTTCTT+TGG + chr1_1:7723134-7723153 Msa0005270:CDS 20.0%
!!! ATGATTTTTCCAATTTCTTT+GGG + chr1_1:7723135-7723154 Msa0005270:CDS 20.0%
!! TAAAAGTAGTAGTAATTCAA+AGG + chr1_1:7723203-7723222 Msa0005270:CDS 20.0%
!!! CTATTGTAAGTTTTAGATTT+TGG + chr1_1:7723530-7723549 Msa0005270:intron 20.0%
!!! TTTTTTTTCCTTTCAAACTA+TGG + chr1_1:7723591-7723610 Msa0005270:intron 20.0%
!!! TTTTTTTCCTTTCAAACTAT+GGG + chr1_1:7723592-7723611 Msa0005270:intron 20.0%
!!! ATGAAGCTTTTTTAATTTCT+TGG - chr1_1:7722482-7722501 None:intergenic 20.0%
!!! TTTTGAAAGATTTTGAAAGA+GGG - chr1_1:7722580-7722599 None:intergenic 20.0%
!!! AATGATTTTTCCAATTTCTT+TGG + chr1_1:7723134-7723153 Msa0005270:CDS 20.0%
!!! ATGATTTTTCCAATTTCTTT+GGG + chr1_1:7723135-7723154 Msa0005270:CDS 20.0%
!! TAAAAGTAGTAGTAATTCAA+AGG + chr1_1:7723203-7723222 Msa0005270:CDS 20.0%
!!! CTATTGTAAGTTTTAGATTT+TGG + chr1_1:7723530-7723549 Msa0005270:intron 20.0%
!!! TTTTTTTTCCTTTCAAACTA+TGG + chr1_1:7723591-7723610 Msa0005270:intron 20.0%
!!! TTTTTTTCCTTTCAAACTAT+GGG + chr1_1:7723592-7723611 Msa0005270:intron 20.0%
!!! GTTTTGAAAGATTTTGAAAG+AGG - chr1_1:7722581-7722600 None:intergenic 25.0%
!! ATGAGTAAGATTTTTGTGTT+AGG - chr1_1:7722603-7722622 None:intergenic 25.0%
!! TTATTCTTTGTTGTCCATAA+AGG - chr1_1:7722847-7722866 None:intergenic 25.0%
! TCATGTTGAAGAAAATAACA+AGG + chr1_1:7723005-7723024 Msa0005270:CDS 25.0%
! AAAATAACAAGGTAAAAGAG+AGG + chr1_1:7723016-7723035 Msa0005270:CDS 25.0%
! TGATAAGAAGAAAGAGTTAT+TGG + chr1_1:7723173-7723192 Msa0005270:CDS 25.0%
!!! GTTTTGAAAGATTTTGAAAG+AGG - chr1_1:7722581-7722600 None:intergenic 25.0%
!! ATGAGTAAGATTTTTGTGTT+AGG - chr1_1:7722603-7722622 None:intergenic 25.0%
!! TTATTCTTTGTTGTCCATAA+AGG - chr1_1:7722847-7722866 None:intergenic 25.0%
! TCATGTTGAAGAAAATAACA+AGG + chr1_1:7723005-7723024 Msa0005270:CDS 25.0%
! AAAATAACAAGGTAAAAGAG+AGG + chr1_1:7723016-7723035 Msa0005270:CDS 25.0%
! TGATAAGAAGAAAGAGTTAT+TGG + chr1_1:7723173-7723192 Msa0005270:CDS 25.0%
GAAACTGGAAAAGAAATTGT+GGG - chr1_1:7722718-7722737 None:intergenic 30.0%
AGAAACTGGAAAAGAAATTG+TGG - chr1_1:7722719-7722738 None:intergenic 30.0%
TGTATTCTATCATCAGAAAC+TGG - chr1_1:7722733-7722752 None:intergenic 30.0%
TCAAAGAGAGTTAATGGAAA+TGG + chr1_1:7722924-7722943 Msa0005270:CDS 30.0%
! TACTTTGAAAGATCTTGTTG+AGG + chr1_1:7722978-7722997 Msa0005270:CDS 30.0%
AAAAACACACGAAAAAGAGA+AGG + chr1_1:7723051-7723070 Msa0005270:CDS 30.0%
ACGAAAAAGAGAAGGAATTA+GGG + chr1_1:7723059-7723078 Msa0005270:CDS 30.0%
GATAAGAAGAATATTGACAG+TGG + chr1_1:7723096-7723115 Msa0005270:CDS 30.0%
TTAGATGATCCCAAAGAAAT+TGG - chr1_1:7723147-7723166 None:intergenic 30.0%
!!! GTAAGTTTTAGATTTTGGCA+TGG + chr1_1:7723535-7723554 Msa0005270:intron 30.0%
AACAAATCCCATAGTTTGAA+AGG - chr1_1:7723602-7723621 None:intergenic 30.0%
GAAACTGGAAAAGAAATTGT+GGG - chr1_1:7722718-7722737 None:intergenic 30.0%
AGAAACTGGAAAAGAAATTG+TGG - chr1_1:7722719-7722738 None:intergenic 30.0%
TGTATTCTATCATCAGAAAC+TGG - chr1_1:7722733-7722752 None:intergenic 30.0%
TCAAAGAGAGTTAATGGAAA+TGG + chr1_1:7722924-7722943 Msa0005270:CDS 30.0%
! TACTTTGAAAGATCTTGTTG+AGG + chr1_1:7722978-7722997 Msa0005270:CDS 30.0%
AAAAACACACGAAAAAGAGA+AGG + chr1_1:7723051-7723070 Msa0005270:CDS 30.0%
ACGAAAAAGAGAAGGAATTA+GGG + chr1_1:7723059-7723078 Msa0005270:CDS 30.0%
GATAAGAAGAATATTGACAG+TGG + chr1_1:7723096-7723115 Msa0005270:CDS 30.0%
TTAGATGATCCCAAAGAAAT+TGG - chr1_1:7723147-7723166 None:intergenic 30.0%
!!! GTAAGTTTTAGATTTTGGCA+TGG + chr1_1:7723535-7723554 Msa0005270:intron 30.0%
AACAAATCCCATAGTTTGAA+AGG - chr1_1:7723602-7723621 None:intergenic 30.0%
AACCACTACAACACATTGAA+AGG - chr1_1:7722510-7722529 None:intergenic 35.0%
!! AGATTTTGAAAGAGGGTGAA+GGG - chr1_1:7722573-7722592 None:intergenic 35.0%
!! AAGATTTTGAAAGAGGGTGA+AGG - chr1_1:7722574-7722593 None:intergenic 35.0%
!! AAGAAATTGTGGGTTGGTAA+TGG - chr1_1:7722708-7722727 None:intergenic 35.0%
CAACATGTTGAAGATGAATC+TGG + chr1_1:7722808-7722827 Msa0005270:CDS 35.0%
! TTCTTTGTTGTCCATAAAGG+TGG - chr1_1:7722844-7722863 None:intergenic 35.0%
AAGAGGTCAAAGAGAGTTAA+TGG + chr1_1:7722918-7722937 Msa0005270:CDS 35.0%
GTAAGTTCATAGCTTGATTC+TGG - chr1_1:7722961-7722980 None:intergenic 35.0%
CACGAAAAAGAGAAGGAATT+AGG + chr1_1:7723058-7723077 Msa0005270:CDS 35.0%
! AATTAGGGCTAGTAGAAATG+TGG + chr1_1:7723074-7723093 Msa0005270:CDS 35.0%
AAGAAGAATATTGACAGTGG+AGG + chr1_1:7723099-7723118 Msa0005270:CDS 35.0%
AGAAGAATATTGACAGTGGA+GGG + chr1_1:7723100-7723119 Msa0005270:CDS 35.0%
! TTCTGATGGATCTGTTAGTA+AGG + chr1_1:7723245-7723264 Msa0005270:CDS 35.0%
ATGGATCTGTTAGTAAGGAT+TGG + chr1_1:7723250-7723269 Msa0005270:CDS 35.0%
AGTGGTAGCATCAAAAGATA+TGG + chr1_1:7723348-7723367 Msa0005270:CDS 35.0%
TGGTAATTAACAAGCCTACA+AGG + chr1_1:7723555-7723574 Msa0005270:intron 35.0%
AAAAAAGGATTGCTCCTTGT+AGG - chr1_1:7723572-7723591 None:intergenic 35.0%
! ACTATGGGATTTGTTTCGTT+AGG + chr1_1:7723607-7723626 Msa0005270:intron 35.0%
AACCACTACAACACATTGAA+AGG - chr1_1:7722510-7722529 None:intergenic 35.0%
!! AGATTTTGAAAGAGGGTGAA+GGG - chr1_1:7722573-7722592 None:intergenic 35.0%
!! AAGATTTTGAAAGAGGGTGA+AGG - chr1_1:7722574-7722593 None:intergenic 35.0%
!! AAGAAATTGTGGGTTGGTAA+TGG - chr1_1:7722708-7722727 None:intergenic 35.0%
CAACATGTTGAAGATGAATC+TGG + chr1_1:7722808-7722827 Msa0005270:CDS 35.0%
! TTCTTTGTTGTCCATAAAGG+TGG - chr1_1:7722844-7722863 None:intergenic 35.0%
AAGAGGTCAAAGAGAGTTAA+TGG + chr1_1:7722918-7722937 Msa0005270:CDS 35.0%
GTAAGTTCATAGCTTGATTC+TGG - chr1_1:7722961-7722980 None:intergenic 35.0%
CACGAAAAAGAGAAGGAATT+AGG + chr1_1:7723058-7723077 Msa0005270:CDS 35.0%
! AATTAGGGCTAGTAGAAATG+TGG + chr1_1:7723074-7723093 Msa0005270:CDS 35.0%
AAGAAGAATATTGACAGTGG+AGG + chr1_1:7723099-7723118 Msa0005270:CDS 35.0%
AGAAGAATATTGACAGTGGA+GGG + chr1_1:7723100-7723119 Msa0005270:CDS 35.0%
! TTCTGATGGATCTGTTAGTA+AGG + chr1_1:7723245-7723264 Msa0005270:CDS 35.0%
ATGGATCTGTTAGTAAGGAT+TGG + chr1_1:7723250-7723269 Msa0005270:CDS 35.0%
AGTGGTAGCATCAAAAGATA+TGG + chr1_1:7723348-7723367 Msa0005270:CDS 35.0%
TGGTAATTAACAAGCCTACA+AGG + chr1_1:7723555-7723574 Msa0005270:intron 35.0%
AAAAAAGGATTGCTCCTTGT+AGG - chr1_1:7723572-7723591 None:intergenic 35.0%
! ACTATGGGATTTGTTTCGTT+AGG + chr1_1:7723607-7723626 Msa0005270:intron 35.0%
CACCTTTCAATGTGTTGTAG+TGG + chr1_1:7722505-7722524 Msa0005270:five_prime_UTR 40.0%
CTGGAAAAGAAATTGTGGGT+TGG - chr1_1:7722714-7722733 None:intergenic 40.0%
GTATGTGTTCACCACCTTTA+TGG + chr1_1:7722830-7722849 Msa0005270:CDS 40.0%
! ATGGCTTGTGTCTTTGATTC+AGG - chr1_1:7722895-7722914 None:intergenic 40.0%
AAGACACAAGCCATTGAAAG+AGG + chr1_1:7722901-7722920 Msa0005270:CDS 40.0%
CTCTCTTTGACCTCTTTCAA+TGG - chr1_1:7722914-7722933 None:intergenic 40.0%
GATCTGTTAGTAAGGATTGG+TGG + chr1_1:7723253-7723272 Msa0005270:CDS 40.0%
GATTGGTGGAAGAAGAAACT+GGG + chr1_1:7723267-7723286 Msa0005270:CDS 40.0%
ATTGGTGGAAGAAGAAACTG+GGG + chr1_1:7723268-7723287 Msa0005270:CDS 40.0%
GGTGATCAAAGTGATCATAG+TGG + chr1_1:7723312-7723331 Msa0005270:CDS 40.0%
!! ATTGACTCGTATTCTAGCGA+AGG + chr1_1:7723642-7723661 Msa0005270:CDS 40.0%
CACCTTTCAATGTGTTGTAG+TGG + chr1_1:7722505-7722524 Msa0005270:five_prime_UTR 40.0%
CTGGAAAAGAAATTGTGGGT+TGG - chr1_1:7722714-7722733 None:intergenic 40.0%
GTATGTGTTCACCACCTTTA+TGG + chr1_1:7722830-7722849 Msa0005270:CDS 40.0%
! ATGGCTTGTGTCTTTGATTC+AGG - chr1_1:7722895-7722914 None:intergenic 40.0%
AAGACACAAGCCATTGAAAG+AGG + chr1_1:7722901-7722920 Msa0005270:CDS 40.0%
CTCTCTTTGACCTCTTTCAA+TGG - chr1_1:7722914-7722933 None:intergenic 40.0%
GATCTGTTAGTAAGGATTGG+TGG + chr1_1:7723253-7723272 Msa0005270:CDS 40.0%
GATTGGTGGAAGAAGAAACT+GGG + chr1_1:7723267-7723286 Msa0005270:CDS 40.0%
ATTGGTGGAAGAAGAAACTG+GGG + chr1_1:7723268-7723287 Msa0005270:CDS 40.0%
GGTGATCAAAGTGATCATAG+TGG + chr1_1:7723312-7723331 Msa0005270:CDS 40.0%
!! ATTGACTCGTATTCTAGCGA+AGG + chr1_1:7723642-7723661 Msa0005270:CDS 40.0%
!! GGTTGGTAATGGTATCTTCG+TGG - chr1_1:7722697-7722716 None:intergenic 45.0%
CCATCAGAAACAGATGCTCT+TGG - chr1_1:7723234-7723253 None:intergenic 45.0%
!! CCAAGAGCATCTGTTTCTGA+TGG + chr1_1:7723231-7723250 Msa0005270:CDS 45.0%
! GGATTGGTGGAAGAAGAAAC+TGG + chr1_1:7723266-7723285 Msa0005270:CDS 45.0%
AAGAAGAAACTGGGGAGTAG+TGG + chr1_1:7723276-7723295 Msa0005270:CDS 45.0%
AGTAGTGGTTCAGAATGTGG+AGG + chr1_1:7723291-7723310 Msa0005270:CDS 45.0%
AGTGGTGTATCTAGCATGAG+TGG + chr1_1:7723330-7723349 Msa0005270:CDS 45.0%
!! GGTTGGTAATGGTATCTTCG+TGG - chr1_1:7722697-7722716 None:intergenic 45.0%
CCATCAGAAACAGATGCTCT+TGG - chr1_1:7723234-7723253 None:intergenic 45.0%
!! CCAAGAGCATCTGTTTCTGA+TGG + chr1_1:7723231-7723250 Msa0005270:CDS 45.0%
! GGATTGGTGGAAGAAGAAAC+TGG + chr1_1:7723266-7723285 Msa0005270:CDS 45.0%
AAGAAGAAACTGGGGAGTAG+TGG + chr1_1:7723276-7723295 Msa0005270:CDS 45.0%
AGTAGTGGTTCAGAATGTGG+AGG + chr1_1:7723291-7723310 Msa0005270:CDS 45.0%
AGTGGTGTATCTAGCATGAG+TGG + chr1_1:7723330-7723349 Msa0005270:CDS 45.0%
!! AAAAATTACTTATAATTATA+TGG - chr1_1:7723432-7723451 None:intergenic 5.0%
!! AAAAATTACTTATAATTATA+TGG - chr1_1:7723432-7723451 None:intergenic 5.0%
GGGAGTAGTGGTTCAGAATG+TGG + chr1_1:7723288-7723307 Msa0005270:CDS 50.0%
GAACCAGTAGTTGTAGCAGC+AGG + chr1_1:7723379-7723398 Msa0005270:CDS 50.0%
ACTCCTGCTGCTACAACTAC+TGG - chr1_1:7723385-7723404 None:intergenic 50.0%
GTAGCAGCAGGAGTAATAGC+AGG + chr1_1:7723391-7723410 Msa0005270:CDS 50.0%
TATTCTAGCGAAGGAGACCC+CGG + chr1_1:7723651-7723670 Msa0005270:CDS 50.0%
GGGAGTAGTGGTTCAGAATG+TGG + chr1_1:7723288-7723307 Msa0005270:CDS 50.0%
GAACCAGTAGTTGTAGCAGC+AGG + chr1_1:7723379-7723398 Msa0005270:CDS 50.0%
ACTCCTGCTGCTACAACTAC+TGG - chr1_1:7723385-7723404 None:intergenic 50.0%
GTAGCAGCAGGAGTAATAGC+AGG + chr1_1:7723391-7723410 Msa0005270:CDS 50.0%
TATTCTAGCGAAGGAGACCC+CGG + chr1_1:7723651-7723670 Msa0005270:CDS 50.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 7722453 7723677 7722453 ID=Msa0005270;Name=Msa0005270
chr1_1 mRNA 7722453 7723677 7722453 ID=Msa0005270-mRNA-1;Parent=Msa0005270;Name=Msa0005270-mRNA-1;_AED=0.19;_eAED=0.19;_QI=232|0|0.5|0.5|1|1|2|0|258
chr1_1 exon 7722453 7723412 7722453 ID=Msa0005270-mRNA-1:exon:2760;Parent=Msa0005270-mRNA-1
chr1_1 exon 7723629 7723677 7723629 ID=Msa0005270-mRNA-1:exon:2761;Parent=Msa0005270-mRNA-1
chr1_1 five_prime_UTR 7722453 7722684 7722453 ID=Msa0005270-mRNA-1:five_prime_utr;Parent=Msa0005270-mRNA-1
chr1_1 CDS 7722685 7723412 7722685 ID=Msa0005270-mRNA-1:cds;Parent=Msa0005270-mRNA-1
chr1_1 CDS 7723629 7723677 7723629 ID=Msa0005270-mRNA-1:cds;Parent=Msa0005270-mRNA-1
Gene Sequence

>Msa0005270

ATGCTTGATCCACGAAGATACCATTACCAACCCACAATTTCTTTTCCAGTTTCTGATGATAGAATACAACAAAAAACTCACATCAACAATAACAAAAACTACAACAATTTTCATCATCATGATCAACATGTTGAAGATGAATCTGGTATGTGTTCACCACCTTTATGGACAACAAAGAATAAAAGCAACAACTATAGAAGTCTTTCACCTGAATCAAAGACACAAGCCATTGAAAGAGGTCAAAGAGAGTTAATGGAAATGGTGAAGAACATGCCAGAATCAAGCTATGAACTTACTTTGAAAGATCTTGTTGAGGAACATCATGTTGAAGAAAATAACAAGGTAAAAGAGAGGAATTTGAGCAACAAAAACACACGAAAAAGAGAAGGAATTAGGGCTAGTAGAAATGTGGATAAGAAGAATATTGACAGTGGAGGGCTTTATTTGAAAATGATTTTTCCAATTTCTTTGGGATCATCTAAGAAACATGATAAGAAGAAAGAGTTATTGGTTAGTAATAAAAGTAGTAGTAATTCAAAGGTTTCACCAAGAGCATCTGTTTCTGATGGATCTGTTAGTAAGGATTGGTGGAAGAAGAAACTGGGGAGTAGTGGTTCAGAATGTGGAGGTGATCAAAGTGATCATAGTGGTGTATCTAGCATGAGTGGTAGCATCAAAAGATATGGTAGTAGCAGAACCAGTAGTTGTAGCAGCAGGAGTAATAGCAGGCAAAGCGAATACATTGACTCGTATTCTAGCGAAGGAGACCCCGGCTAG

Protein sequence

>Msa0005270

MLDPRRYHYQPTISFPVSDDRIQQKTHINNNKNYNNFHHHDQHVEDESGMCSPPLWTTKNKSNNYRSLSPESKTQAIERGQRELMEMVKNMPESSYELTLKDLVEEHHVEENNKVKERNLSNKNTRKREGIRASRNVDKKNIDSGGLYLKMIFPISLGSSKKHDKKKELLVSNKSSSNSKVSPRASVSDGSVSKDWWKKKLGSSGSECGGDQSDHSGVSSMSGSIKRYGSSRTSSCSSRSNSRQSEYIDSYSSEGDPG*