AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0713080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0713080 MtrunA17_Chr8g0369361 94.431 826 20 2 189 988 1 826 0.0 1629
Msa0713080 MtrunA17_Chr6g0484831 48.741 794 354 10 175 936 46 818 0.0 760
Msa0713080 MtrunA17_Chr5g0406641 48.615 794 355 10 175 936 47 819 0.0 756
Msa0713080 MtrunA17_Chr7g0215341 48.167 791 358 11 175 936 43 810 0.0 739
Msa0713080 MtrunA17_Chr4g0007641 47.815 778 355 9 197 936 62 826 0.0 738
Msa0713080 MtrunA17_Chr6g0486931 47.308 780 362 13 197 936 146 916 0.0 719
Msa0713080 MtrunA17_Chr6g0464681 43.403 811 370 11 173 936 41 809 0.0 672
Msa0713080 MtrunA17_Chr8g0369351 93.258 178 9 1 1 178 1 175 5.50e-107 332
Msa0713080 MtrunA17_Chr5g0427891 49.123 342 148 3 620 936 1 341 2.89e-101 323
Msa0713080 MtrunA17_Chr6g0477371 37.741 363 175 10 580 916 1206 1543 2.54e-61 229
Msa0713080 MtrunA17_Chr2g0302601 37.741 363 175 10 580 916 1215 1552 7.18e-61 228
Msa0713080 MtrunA17_Chr4g0017221 37.741 363 175 11 580 916 1190 1527 2.25e-59 223
Msa0713080 MtrunA17_Chr2g0306841 75.556 90 22 0 685 774 13 102 1.88e-42 150
Msa0713080 MtrunA17_Chr3g0087051 43.056 144 73 4 782 916 3 146 1.04e-24 101
Msa0713080 MtrunA17_Chr8g0364111 59.091 66 27 0 871 936 3 68 8.12e-22 90.9
Msa0713080 MtrunA17_Chr5g0427881 61.017 59 23 0 537 595 45 103 1.58e-20 87.8
Msa0713080 MtrunA17_Chr8g0364091 32.227 211 123 7 244 438 6 212 6.21e-19 87.8
Msa0713080 MtrunA17_Chr5g0427871 37.037 108 62 3 197 302 38 141 2.45e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0713080 AT4G19020.1 53.370 920 376 13 63 944 385 1289 0.0 947
Msa0713080 AT4G19020.2 53.370 920 376 13 63 944 337 1241 0.0 947
Msa0713080 AT1G69770.1 46.523 791 373 15 192 938 45 829 0.0 694
Msa0713080 AT1G80740.1 44.031 779 381 12 197 936 19 781 0.0 640
Msa0713080 AT4G14140.3 36.898 374 197 8 576 929 1164 1518 4.82e-59 223
Msa0713080 AT4G14140.1 36.898 374 197 8 576 929 1164 1518 4.82e-59 223
Msa0713080 AT4G14140.2 36.898 374 197 8 576 929 1190 1544 5.43e-59 223
Msa0713080 AT4G08990.1 36.096 374 200 8 576 929 1157 1511 2.93e-57 217
Msa0713080 AT5G49160.2 36.870 377 193 10 576 929 1091 1445 7.78e-57 216
Msa0713080 AT5G49160.1 36.870 377 193 10 576 929 1179 1533 8.76e-57 216
Msa0713080 AT4G13610.1 35.519 366 175 11 576 916 1066 1395 1.19e-54 209

Find 227 sgRNAs with CRISPR-Local

Find 827 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCTTTGAAATTCTGTTTC+TGG 0.122674 5_1:+4961123 None:intergenic
AACACTGACTTTCTCTATTA+TGG 0.156137 5_1:+4966639 None:intergenic
AAGATTAACTGATGATATTT+TGG 0.166590 5_1:+4965749 None:intergenic
ACTTGATAATTGAACATAAT+TGG 0.167538 5_1:+4959012 None:intergenic
CAACATCTTTCGACTCAAAA+AGG 0.205013 5_1:+4958639 None:intergenic
TTTGCCTCGTCTGTGTTAAA+AGG 0.230458 5_1:-4969133 Msa0713080:CDS
ATTCTGTTTCTGGAGGATTT+TGG 0.290409 5_1:+4961133 None:intergenic
ATTTGCAGGTACCGTCAAAT+TGG 0.295665 5_1:-4959148 Msa0713080:intron
GGCTGTGGTGGCATGTCAAC+TGG 0.307159 5_1:-4965786 Msa0713080:CDS
TCCCCAACCTGGTTTGAAAA+TGG 0.308068 5_1:-4969175 Msa0713080:CDS
GCATTACTAGATCTTTATTC+TGG 0.309643 5_1:-4965807 Msa0713080:CDS
GCAAATTTCCGTGATCTTCC+TGG 0.312346 5_1:-4960532 Msa0713080:CDS
GTACCTGTTTCGCGAGCTTT+AGG 0.319919 5_1:-4959112 Msa0713080:CDS
CTCTTCTTCTTGTTCTGTTA+AGG 0.324484 5_1:-4971057 Msa0713080:intron
ATCTGACTTCTATTATGATA+TGG 0.329852 5_1:-4966422 Msa0713080:CDS
GTGACTGGATCCACATTAAA+TGG 0.335651 5_1:-4960733 Msa0713080:CDS
GCGGCGGAGAAGTTGATAAT+TGG 0.338296 5_1:+4971305 None:intergenic
CAATGATAGCTTGGGCATAA+TGG 0.349422 5_1:+4968561 None:intergenic
CGACGGTCGCCGAGATTATC+AGG 0.352893 5_1:-4971098 Msa0713080:CDS
ATTGTTGCAGCTGGCTGTTA+TGG 0.353868 5_1:-4963749 Msa0713080:CDS
TCATAAGTGAAGCAGTAATC+TGG 0.356456 5_1:+4959852 None:intergenic
CATGTGATGGCAATGGAAAT+TGG 0.367105 5_1:+4961612 None:intergenic
CCAGAATACAACCTTCCGTT+TGG 0.368824 5_1:+4960627 None:intergenic
TTACTGCTTCACTTATGAAC+AGG 0.369696 5_1:-4959847 Msa0713080:CDS
ATCTTTCGACTCAAGAATAA+TGG 0.374522 5_1:+4958676 None:intergenic
AAGTTTGGGGATCTAAATAT+TGG 0.377742 5_1:+4971386 None:intergenic
ATTAGACAATTCAATGGAAA+TGG 0.381056 5_1:+4969270 None:intergenic
CATGCATTACCAAGCAAGAT+TGG 0.381163 5_1:-4963774 Msa0713080:CDS
CGAAGAACTCGATCTTCAAA+TGG 0.381384 5_1:-4969379 Msa0713080:CDS
GTGCGTTCTAACGGAAAATC+TGG 0.382316 5_1:-4971170 Msa0713080:CDS
TGAGCTTCATCATCAGGTAT+TGG 0.384674 5_1:+4969022 None:intergenic
GCTTTCTATGTGCAATTCCT+AGG 0.385806 5_1:+4959083 None:intergenic
CATGATAATCACCTTCATCT+TGG 0.386394 5_1:+4966713 None:intergenic
CTGGCCTCCGCCTGAGTTTG+AGG 0.391425 5_1:-4961573 Msa0713080:intron
CAGTTTATATCGTCAACTTC+AGG 0.391923 5_1:+4969226 None:intergenic
GATCTTCCTGGAATTGTTGT+AGG 0.393166 5_1:-4960520 Msa0713080:CDS
GTTCTGTGCAACTCAGGATT+AGG 0.394943 5_1:+4965837 None:intergenic
CAATTGTAAGGAAAGCTTGC+AGG 0.400096 5_1:-4964159 Msa0713080:CDS
ATGTGATGGCAATGGAAATT+GGG 0.404250 5_1:+4961613 None:intergenic
CTTGAGTCGACAGATGTTTG+TGG 0.405632 5_1:-4958734 Msa0713080:CDS
GGTGAAGTTGATGTTGTTTG+TGG 0.406349 5_1:-4964004 Msa0713080:CDS
TTGTACCTGCAGCAATTGTA+AGG 0.407342 5_1:-4964171 Msa0713080:intron
GTGGTGTCGCCAACATCTTT+TGG 0.408693 5_1:+4958827 None:intergenic
GTGGTGTCGCCAACATCTTT+TGG 0.408693 5_1:+4958926 None:intergenic
CATTATGCCCAAGCTATCAT+TGG 0.412310 5_1:-4968560 Msa0713080:CDS
TATCCTAAAGCTCGCGAAAC+AGG 0.412823 5_1:+4959109 None:intergenic
TCAGATCCTACAACAATTCC+AGG 0.414573 5_1:+4960514 None:intergenic
GCGATCTCCGGTGGTGAAAT+CGG 0.414986 5_1:-4971219 Msa0713080:CDS
AGAAACATTCCGTCATTCAT+TGG 0.417690 5_1:-4969049 Msa0713080:CDS
ATGATGTTATTATGAGATAC+TGG 0.419849 5_1:-4961592 Msa0713080:CDS
GCACATTTATGTAGGCCATT+TGG 0.420365 5_1:-4959738 Msa0713080:intron
TCAACGAAAGGATGTATGTA+TGG 0.420595 5_1:-4969073 Msa0713080:CDS
GGACTTTCTGCAACTATTGA+AGG 0.421232 5_1:-4965445 Msa0713080:CDS
TGTCCATGAAAACTACTATC+TGG 0.421252 5_1:+4963903 None:intergenic
CAGAATACAACCTTCCGTTT+GGG 0.421706 5_1:+4960628 None:intergenic
CTAGATCTTTATTCTGGCTG+TGG 0.426164 5_1:-4965801 Msa0713080:CDS
CTTGCAGGTTGGTCAGAAGT+TGG 0.431528 5_1:-4966458 Msa0713080:intron
GGTTTACTTAATACCTCATC+AGG 0.431733 5_1:+4963683 None:intergenic
TTCTCCATTAAAACATACTT+AGG 0.434823 5_1:+4963863 None:intergenic
ATGTCAACTGGACTGTGCTT+AGG 0.440967 5_1:-4965774 Msa0713080:CDS
AAACTGCTCAGCACTGTCTC+TGG 0.441731 5_1:-4969209 Msa0713080:CDS
TGCAGTTCCCAATGATAGCT+TGG 0.446946 5_1:+4968552 None:intergenic
CCTCCTTGTCAAGGAATTAG+TGG 0.449857 5_1:-4963977 Msa0713080:CDS
CAACTGCATTTCCAATTTGA+CGG 0.453435 5_1:+4959137 None:intergenic
CTTTGTTGCTCCATTTAATG+TGG 0.455519 5_1:+4960723 None:intergenic
GACGGCAATGTGCGTTCTAA+CGG 0.457315 5_1:-4971179 Msa0713080:CDS
CCTGAGTTCCTTGACCGTAA+TGG 0.460963 5_1:+4965369 None:intergenic
AAGATATGCTTTAGGTCGTC+TGG 0.463034 5_1:-4963801 Msa0713080:intron
CACTTACATGTGTCTCTGGA+TGG 0.475331 5_1:+4965564 None:intergenic
CTTGAATTCTGTAAAACCAT+TGG 0.475561 5_1:+4966837 None:intergenic
TTTGTGGGTCTGTGAAAGAA+AGG 0.478244 5_1:-4959499 Msa0713080:intron
AGTTGATAATTGGATCGGTT+AGG 0.482329 5_1:+4971315 None:intergenic
CAACAATTCCCAATCTTGCT+TGG 0.483514 5_1:+4963765 None:intergenic
GTGAGGATTCGATCCTGCTC+TGG 0.484537 5_1:+4959569 None:intergenic
ATAATTGGAAAGAGAGAACT+TGG 0.485222 5_1:+4959027 None:intergenic
TCAGCACTTACATGTGTCTC+TGG 0.486920 5_1:+4965560 None:intergenic
CTCCGCCGCCGTCGCAATGA+CGG 0.487376 5_1:-4971291 Msa0713080:exon
GGACAAACAATGTAATGATA+AGG 0.487894 5_1:-4968752 Msa0713080:CDS
GGGAACCAATTGAAAACTTA+CGG 0.488212 5_1:-4964261 Msa0713080:intron
AGGACCTGGTTATGACAACT+TGG 0.489722 5_1:+4959672 None:intergenic
TATCAGGTTGTCCAAGATGA+AGG 0.491300 5_1:-4966724 Msa0713080:intron
ATTTCACCACCGGAGATCGC+TGG 0.495141 5_1:+4971222 None:intergenic
CTCCGTCATTGCGACGGCGG+CGG 0.496879 5_1:+4971289 None:intergenic
GGGATGGCGTTACGAATTGA+AGG 0.503722 5_1:-4968990 Msa0713080:intron
TCACCATACGAGAATTTGCC+AGG 0.505076 5_1:-4959550 Msa0713080:CDS
TCCCACCACAATCGTCCAAA+TGG 0.505144 5_1:+4959723 None:intergenic
AATCTGGAAGGAAGAAAGGT+AGG 0.505682 5_1:-4971154 Msa0713080:CDS
ATCTTTCGACTCAAGAATAG+TGG 0.506052 5_1:+4958808 None:intergenic
ATCTTTCGACTCAAGAATAG+TGG 0.506052 5_1:+4958907 None:intergenic
ATGCATTACCAAGCAAGATT+GGG 0.506356 5_1:-4963773 Msa0713080:CDS
ATAAAATTCCATTACGGTCA+AGG 0.506381 5_1:-4965377 Msa0713080:CDS
GCAGTTCCCAATGATAGCTT+GGG 0.507597 5_1:+4968553 None:intergenic
TCAGGAGAATGTTGTTCCAC+TGG 0.509174 5_1:+4969244 None:intergenic
GGAATTGCACATAGAAAGCT+TGG 0.509441 5_1:-4959079 Msa0713080:CDS
ACATTCCGTAAAATACCAAC+AGG 0.512228 5_1:-4966379 Msa0713080:intron
TGCTCTGCTTGAAACACCTC+CGG 0.516919 5_1:+4971257 None:intergenic
AGTCATCTTCAGACATAAAG+AGG 0.517772 5_1:+4960671 None:intergenic
TTCTGTAAAACCATTGGACT+CGG 0.518680 5_1:+4966843 None:intergenic
TGGTGAATTAGACAATTCAA+TGG 0.521561 5_1:+4969264 None:intergenic
GATCTTTATTCTGGCTGTGG+TGG 0.522192 5_1:-4965798 Msa0713080:CDS
CTGGTTATGACAACTTGGGC+TGG 0.522666 5_1:+4959677 None:intergenic
CGAGAATTTGCCAGGCTGCA+AGG 0.523048 5_1:-4959542 Msa0713080:CDS
CATAAGTGAAGCAGTAATCT+GGG 0.523712 5_1:+4959853 None:intergenic
ACGATGAAAGTGAAGATACA+TGG 0.525406 5_1:-4964282 Msa0713080:CDS
AGACGAGTCCCAGCGATCTC+CGG 0.527072 5_1:-4971231 Msa0713080:CDS
AGGATTAATACCTCAAACTC+AGG 0.528590 5_1:+4961563 None:intergenic
GGAAAATCTGGAAGGAAGAA+AGG 0.531823 5_1:-4971158 Msa0713080:CDS
AAGAGAGAACTTGGGTGGGA+GGG 0.533881 5_1:+4959036 None:intergenic
AACATCTGTCGACTCAAGAA+TGG 0.534310 5_1:+4958739 None:intergenic
ATTCTTGAGTCGAAAGATGT+TGG 0.535096 5_1:-4958803 Msa0713080:CDS
ATTCTTGAGTCGAAAGATGT+TGG 0.535096 5_1:-4958902 Msa0713080:CDS
ATCATGAAATCCTTGCAGCC+TGG 0.537807 5_1:+4959532 None:intergenic
AACATCTGTCGACTCAAGAA+TGG 0.537961 5_1:+4958574 None:intergenic
GAAGAACTCGATCTTCAAAT+GGG 0.539090 5_1:-4969378 Msa0713080:CDS
TTGCAGGAGTTTGTGAGAGA+GGG 0.539361 5_1:-4964143 Msa0713080:CDS
CTCAGGATTAGGCAGACTCT+TGG 0.539752 5_1:+4965848 None:intergenic
GAAACATGGTCTATATTTGA+AGG 0.539999 5_1:-4965244 Msa0713080:intron
CGATTCCTCCGTCATTGCGA+CGG 0.540387 5_1:+4971283 None:intergenic
AGTTCTGTTCTGTGCAACTC+AGG 0.541008 5_1:+4965831 None:intergenic
TGTGGAGGTCCTCCTTGTCA+AGG 0.543784 5_1:-4963986 Msa0713080:CDS
ATGTAATTCTTACAGGGTGA+AGG 0.544932 5_1:-4966929 Msa0713080:intron
ATTATGCCCAAGCTATCATT+GGG 0.545088 5_1:-4968559 Msa0713080:CDS
TGATTTCTTTCATCGTCCAA+TGG 0.545646 5_1:+4963926 None:intergenic
TAGAAACATGGAATCACCAT+TGG 0.547717 5_1:-4963942 Msa0713080:CDS
CTATGCAAACGGTATAATGT+TGG 0.548171 5_1:-4965411 Msa0713080:CDS
CATCTCTTTCGTAGGTACAC+TGG 0.548563 5_1:-4964312 Msa0713080:intron
TTCTGCAACTATTGAAGGAG+TGG 0.548835 5_1:-4965440 Msa0713080:CDS
AATATTACTACTTACAGGAA+GGG 0.549097 5_1:+4964100 None:intergenic
ATCTGGAAGGAAGAAAGGTA+GGG 0.549198 5_1:-4971153 Msa0713080:CDS
CTTGCAGGAGTTTGTGAGAG+AGG 0.549922 5_1:-4964144 Msa0713080:CDS
CGACCGTCGTCGATTCTCCT+CGG 0.551441 5_1:+4971112 None:intergenic
CAGCCTGGCAAATTCTCGTA+TGG 0.553269 5_1:+4959547 None:intergenic
ATTCTTGAGCCAAAAGATGT+TGG 0.553563 5_1:-4958836 Msa0713080:CDS
CTTTGAAATTCTGTTTCTGG+AGG 0.554221 5_1:+4961126 None:intergenic
GAGTGACTCTCAAGAACAGC+AGG 0.554424 5_1:+4965891 None:intergenic
TTGGAAAGAGAGAACTTGGG+TGG 0.556163 5_1:+4959031 None:intergenic
AAAGAGAGAACTTGGGTGGG+AGG 0.557392 5_1:+4959035 None:intergenic
CTTGGGCTGGTTAGTGCGGT+AGG 0.557691 5_1:+4959690 None:intergenic
CTTTCTATGTGCAATTCCTA+GGG 0.557841 5_1:+4959084 None:intergenic
CAGCCCAAGTTGTCATAACC+AGG 0.557854 5_1:-4959676 Msa0713080:intron
TCAGGTGCATCTGACGGAAG+AGG 0.560195 5_1:-4971080 Msa0713080:CDS
AGATTGGGAATTGTTGCAGC+TGG 0.560569 5_1:-4963758 Msa0713080:CDS
GGCCATTTGGACGATTGTGG+TGG 0.561308 5_1:-4959725 Msa0713080:CDS
CAACGAAAGGATGTATGTAT+GGG 0.562242 5_1:-4969072 Msa0713080:CDS
AGGTCACAAACTTTGAAACT+CGG 0.562284 5_1:-4961170 Msa0713080:CDS
AAAAGTATTTCCGAGTCCAA+TGG 0.564307 5_1:-4966853 Msa0713080:CDS
GGTAGTAATACATCCAGAGC+AGG 0.565104 5_1:-4959582 Msa0713080:CDS
GTGTTTGTCAAATTCCCAAA+CGG 0.565207 5_1:-4960642 Msa0713080:CDS
TTTCACCACCGGAGATCGCT+GGG 0.565286 5_1:+4971223 None:intergenic
AAAACACGCAATCGAAATTG+TGG 0.566401 5_1:+4963722 None:intergenic
TGATAATTGGATCGGTTAGG+TGG 0.566414 5_1:+4971318 None:intergenic
ATATTACTACTTACAGGAAG+GGG 0.567195 5_1:+4964101 None:intergenic
GCTCCTTCCGATGTAATTGA+CGG 0.569443 5_1:-4971197 Msa0713080:CDS
ATAACATCATGTGATGGCAA+TGG 0.571519 5_1:+4961605 None:intergenic
TTGTCAAATTCCCAAACGGA+AGG 0.571579 5_1:-4960638 Msa0713080:intron
ACGATTGTGGTGGGATGAAA+CGG 0.575514 5_1:-4959715 Msa0713080:CDS
TCTTTCGTAGGTACACTGGA+AGG 0.578339 5_1:-4964308 Msa0713080:intron
CTTTCGTAGGTACACTGGAA+GGG 0.581534 5_1:-4964307 Msa0713080:intron
GGAACAACAACGAGAAGTAG+AGG 0.582807 5_1:-4961447 Msa0713080:CDS
GAAGTTGATGTTGTTTGTGG+AGG 0.583024 5_1:-4964001 Msa0713080:CDS
TTTGGGGATCTAAATATTGG+AGG 0.584000 5_1:+4971389 None:intergenic
ACGAAATCACATCCCCAACC+TGG 0.585616 5_1:-4969186 Msa0713080:CDS
GAAGGAGCCGATTTCACCAC+CGG 0.586073 5_1:+4971212 None:intergenic
GACGGAGGAATCGCCGCCGG+AGG 0.587534 5_1:-4971273 Msa0713080:CDS
GGTCACAAACTTTGAAACTC+GGG 0.589954 5_1:-4961169 Msa0713080:CDS
AATGACGGAGGAATCGCCGC+CGG 0.590099 5_1:-4971276 Msa0713080:CDS
TCAGATGCACCTGATAATCT+CGG 0.591391 5_1:+4971089 None:intergenic
CAATTATCAAGTAATCATGT+CGG 0.591656 5_1:-4959001 Msa0713080:CDS
AGGATTGTTGATATATGCTA+CGG 0.592258 5_1:-4965285 Msa0713080:CDS
TTGCCGTCAATTACATCGGA+AGG 0.592578 5_1:+4971194 None:intergenic
GCCATTTGGACGATTGTGGT+GGG 0.592911 5_1:-4959724 Msa0713080:CDS
ATTCTTGAGTCGAAAGATGT+CGG 0.593806 5_1:-4958671 Msa0713080:CDS
GTAGGCCATTTGGACGATTG+TGG 0.593974 5_1:-4959728 Msa0713080:intron
TTCCTCCGTCATTGCGACGG+CGG 0.594024 5_1:+4971286 None:intergenic
CCATTACGGTCAAGGAACTC+AGG 0.595419 5_1:-4965369 Msa0713080:CDS
CTCATAATAACATCATGTGA+TGG 0.596138 5_1:+4961599 None:intergenic
CGAGCTTTAGGATATGCCCT+AGG 0.599965 5_1:-4959100 Msa0713080:CDS
GTCATCTTCAGACATAAAGA+GGG 0.602783 5_1:+4960672 None:intergenic
TGGAAAGAGAGAACTTGGGT+GGG 0.603553 5_1:+4959032 None:intergenic
TACTGCTTCACTTATGAACA+GGG 0.603609 5_1:-4959846 Msa0713080:CDS
TCATCTGCTTCATCAACGAA+AGG 0.605971 5_1:-4969085 Msa0713080:CDS
AATACCTCAAACTCAGGCGG+AGG 0.606582 5_1:+4961569 None:intergenic
TCTGCAACTATTGAAGGAGT+GGG 0.609266 5_1:-4965439 Msa0713080:CDS
GTTCTTGAGCCAAAAGATGT+TGG 0.609587 5_1:-4958935 Msa0713080:CDS
AGATTATCAGGTGCATCTGA+CGG 0.610171 5_1:-4971086 Msa0713080:CDS
TGTTAGATATAGAACACCTA+AGG 0.611768 5_1:-4966620 Msa0713080:intron
AGTGGGAGAAGCTATGCAAA+CGG 0.613478 5_1:-4965422 Msa0713080:CDS
CAACAATTCCAGGAAGATCA+CGG 0.615203 5_1:+4960524 None:intergenic
ATATAATCGTTATAGAAACA+TGG 0.619137 5_1:-4963954 Msa0713080:CDS
TGACATATTGAGATTTGACA+AGG 0.619202 5_1:-4963834 Msa0713080:CDS
CGCCGCCGTCGCAATGACGG+AGG 0.619769 5_1:-4971288 Msa0713080:exon
ATCATCAGTTAATCTTGTCA+CGG 0.620122 5_1:-4965742 Msa0713080:intron
TACAGGAGGAAGATCAGAGA+TGG 0.622793 5_1:+4961403 None:intergenic
CCCAGTAAAACAGAGAAACA+TGG 0.623591 5_1:-4965258 Msa0713080:CDS
ATATCATAATAGAAGTCAGA+TGG 0.625957 5_1:+4966424 None:intergenic
GGAGAAGTTGATAATTGGAT+CGG 0.627237 5_1:+4971310 None:intergenic
TTCTGAGATGAAATTGTCCG+AGG 0.627618 5_1:-4971129 Msa0713080:CDS
CGATGAAAGTGAAGATACAT+GGG 0.632459 5_1:-4964281 Msa0713080:CDS
AAGGTGATTATCATGACAAG+AGG 0.635570 5_1:-4966705 Msa0713080:CDS
ATTGGATCACCAATGAATGA+CGG 0.635696 5_1:+4969040 None:intergenic
CACATTGCCGTCAATTACAT+CGG 0.638503 5_1:+4971190 None:intergenic
CGAGTCCCAGCGATCTCCGG+TGG 0.641380 5_1:-4971228 Msa0713080:CDS
CAATACTGTTGCTTATGATG+AGG 0.644161 5_1:-4961468 Msa0713080:CDS
ACAACTTGGGCTGGTTAGTG+CGG 0.644922 5_1:+4959686 None:intergenic
TGAATTGTCTAATTCACCAG+TGG 0.650350 5_1:-4969260 Msa0713080:CDS
GTTCTAACGGAAAATCTGGA+AGG 0.653412 5_1:-4971166 Msa0713080:CDS
GGTGAGAAATGAATCTGCAG+AGG 0.653824 5_1:-4965466 Msa0713080:CDS
TATATACGATCAACTAAACA+TGG 0.654142 5_1:-4961102 Msa0713080:intron
TGGCAAATTCTCGTATGGTG+AGG 0.654720 5_1:+4959552 None:intergenic
TATCCACTAATTCCTTGACA+AGG 0.656925 5_1:+4963974 None:intergenic
CCACTAATTCCTTGACAAGG+AGG 0.663586 5_1:+4963977 None:intergenic
GGACCTGGTTATGACAACTT+GGG 0.663853 5_1:+4959673 None:intergenic
CCAACCTGGTTTGAAAATGG+CGG 0.665327 5_1:-4969172 Msa0713080:CDS
GACATATTGAGATTTGACAA+GGG 0.671317 5_1:-4963833 Msa0713080:intron
GCTTCACTTATGAACAGGGG+AGG 0.676655 5_1:-4959842 Msa0713080:CDS
TGTGATGGCAATGGAAATTG+GGG 0.682178 5_1:+4961614 None:intergenic
ATGAACAGGGGAGGTCCAAG+AGG 0.683575 5_1:-4959833 Msa0713080:intron
TCTTGAGAGTCACTCAACAG+AGG 0.686399 5_1:-4965883 Msa0713080:CDS
ATTAATACCTCAAACTCAGG+CGG 0.690332 5_1:+4961566 None:intergenic
TCATCTTCAGACATAAAGAG+GGG 0.705011 5_1:+4960673 None:intergenic
TGGGAATTTGACAAACACGT+AGG 0.708116 5_1:+4960647 None:intergenic
ACTGCTTCACTTATGAACAG+GGG 0.708171 5_1:-4959845 Msa0713080:CDS
TTACGGTCAAGGAACTCAGG+AGG 0.708817 5_1:-4965366 Msa0713080:CDS
TCTGCTTGAAACACCTCCGG+CGG 0.729497 5_1:+4971260 None:intergenic
TGTTGTAGGATCTGACAATG+TGG 0.735845 5_1:-4960506 Msa0713080:intron
TAATTGGAAAGAGAGAACTT+GGG 0.738407 5_1:+4959028 None:intergenic
TGTCCGAGGAGAATCGACGA+CGG 0.788177 5_1:-4971115 Msa0713080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAAATTTGTTAAAATATTTT+TGG - chr5_1:4959100-4959119 Msa0713080:CDS 10.0%
!!! TTAACATAATTATCAAATTT+TGG + chr5_1:4959190-4959209 None:intergenic 10.0%
!!! GTTTTTTTTTGTATTTAATT+AGG - chr5_1:4959398-4959417 Msa0713080:intron 10.0%
!!! TATAGTTTAATTTTTTTTAG+AGG + chr5_1:4959925-4959944 None:intergenic 10.0%
!!! TTGATATTTATTTTTGAAAA+TGG - chr5_1:4962551-4962570 Msa0713080:intron 10.0%
!! AGAAATCAATAAATATTATA+TGG + chr5_1:4964419-4964438 None:intergenic 10.0%
!!! TTTTTTCAAAATAATTTATC+TGG - chr5_1:4968379-4968398 Msa0713080:intron 10.0%
!!! ACTCTTTTTTTAATAAAAAA+GGG + chr5_1:4968608-4968627 None:intergenic 10.0%
!!! AACTCTTTTTTTAATAAAAA+AGG + chr5_1:4968609-4968628 None:intergenic 10.0%
!! AGTTATATTTATTAAATTCT+GGG - chr5_1:4968625-4968644 Msa0713080:intron 10.0%
!! AGAATACATTAAAAATAAAA+AGG + chr5_1:4969097-4969116 None:intergenic 10.0%
!!! AAAAAGATTATGACTTTTTT+TGG - chr5_1:4959047-4959066 Msa0713080:CDS 15.0%
!!! CAACATAATTATCAAAATTT+TGG + chr5_1:4959239-4959258 None:intergenic 15.0%
!!! TTTTGATAATTATGTTGAAA+TGG - chr5_1:4959242-4959261 Msa0713080:intron 15.0%
!! TAAACTCTATAATCTATTAA+TGG - chr5_1:4959773-4959792 Msa0713080:intron 15.0%
!! AAAAATTAACTGATACAAAA+TGG - chr5_1:4959810-4959829 Msa0713080:intron 15.0%
!!! ATGGTTAATATTTTCTTTTT+GGG + chr5_1:4961007-4961026 None:intergenic 15.0%
!!! AATGGTTAATATTTTCTTTT+TGG + chr5_1:4961008-4961027 None:intergenic 15.0%
!! AAAATCAGATAAAAAGAATA+CGG + chr5_1:4961125-4961144 None:intergenic 15.0%
!!! ATATTTTAACTCTTAGATTT+TGG - chr5_1:4962026-4962045 Msa0713080:intron 15.0%
!!! TATTTTAACTCTTAGATTTT+GGG - chr5_1:4962027-4962046 Msa0713080:intron 15.0%
!!! AATTACAAATATGAGTTTTA+TGG - chr5_1:4962242-4962261 Msa0713080:intron 15.0%
!! AATAAATATCATGATATACT+CGG + chr5_1:4963114-4963133 None:intergenic 15.0%
!! TAGAATAAACTAGAAAAAAT+TGG + chr5_1:4963605-4963624 None:intergenic 15.0%
!!! TTTATTGATTTCTATTGTAT+AGG - chr5_1:4964426-4964445 Msa0713080:intron 15.0%
!! CAAAAAATAAAATTCCATTA+CGG - chr5_1:4964530-4964549 Msa0713080:intron 15.0%
!!! TTCTGTTTTTTTGTTAATAA+CGG - chr5_1:4965320-4965339 Msa0713080:CDS 15.0%
!!! TTTTTTGTATTAAGCATTAA+TGG + chr5_1:4966390-4966409 None:intergenic 15.0%
!! TAAAAAATTAAATTCAAGCA+AGG + chr5_1:4966801-4966820 None:intergenic 15.0%
!!! ATTTTGTTAATACTATTTCT+AGG + chr5_1:4967481-4967500 None:intergenic 15.0%
!!! TTTTCTTGATTTTTTATGTT+TGG - chr5_1:4968543-4968562 Msa0713080:CDS 15.0%
!! GAGTTATATTTATTAAATTC+TGG - chr5_1:4968624-4968643 Msa0713080:intron 15.0%
!! GTTATATTTATTAAATTCTG+GGG - chr5_1:4968626-4968645 Msa0713080:intron 15.0%
!! TTAACATAATTCAATATTGT+AGG - chr5_1:4968723-4968742 Msa0713080:intron 15.0%
!! TAGTATTAATAAATACAGTT+CGG - chr5_1:4968900-4968919 Msa0713080:intron 15.0%
!! ATACAAATATAAAAGATAGA+TGG + chr5_1:4968962-4968981 None:intergenic 15.0%
!!! TCTTTTATATTTGTATATCT+AGG - chr5_1:4968966-4968985 Msa0713080:intron 15.0%
!!! CTTTTATATTTGTATATCTA+GGG - chr5_1:4968967-4968986 Msa0713080:intron 15.0%
!! TGTATTCTAACAATAAATTA+TGG - chr5_1:4969109-4969128 Msa0713080:CDS 15.0%
!! ATTATATATTCCCATAATTA+AGG - chr5_1:4969937-4969956 Msa0713080:intron 15.0%
!! TTATATATTCCCATAATTAA+GGG - chr5_1:4969938-4969957 Msa0713080:intron 15.0%
!!! ATGATTATTATAGATTTTGT+GGG - chr5_1:4970399-4970418 Msa0713080:intron 15.0%
!!! TTTTAGATAGTTAAAAAACA+TGG - chr5_1:4970656-4970675 Msa0713080:intron 15.0%
!! TTTAGATAGTTAAAAAACAT+GGG - chr5_1:4970657-4970676 Msa0713080:intron 15.0%
!! ATCATAAGAAAAAGAAAATA+AGG + chr5_1:4970742-4970761 None:intergenic 15.0%
!!! AACATTTTTCAACTAAAAAA+TGG + chr5_1:4971375-4971394 None:intergenic 15.0%
!!! ATTTTTTAGTTGAAAAATGT+TGG - chr5_1:4971374-4971393 Msa0713080:five_prime_UTR 15.0%
!! TAAAAGAATGAAGATAATTC+TGG + chr5_1:4958942-4958961 None:intergenic 20.0%
!!! TTTGATTTTATTTTTGGTCA+AGG - chr5_1:4959302-4959321 Msa0713080:intron 20.0%
!! TATTTCCATAAATATCTAAG+CGG + chr5_1:4959428-4959447 None:intergenic 20.0%
!! TCAAAAGAATATTACCATAT+TGG + chr5_1:4959530-4959549 None:intergenic 20.0%
!!! TATAGAGTTTAATCTAGTTT+AGG + chr5_1:4959764-4959783 None:intergenic 20.0%
!! TATTATATGCAATAACACAT+TGG - chr5_1:4960408-4960427 Msa0713080:intron 20.0%
!! AGAAAGAAAAAAACAATCAA+AGG + chr5_1:4960459-4960478 None:intergenic 20.0%
!!! GATGATTTAAACTTCTTTTT+TGG + chr5_1:4960813-4960832 None:intergenic 20.0%
!!! AAAAGCATACTAAAAAAATC+AGG + chr5_1:4960956-4960975 None:intergenic 20.0%
!!! AAAGCTTATTTTAGATACAA+CGG + chr5_1:4960983-4961002 None:intergenic 20.0%
!! CTTATTCATAAATTGAATTG+TGG - chr5_1:4961208-4961227 Msa0713080:intron 20.0%
!!! TGCATTTATACTTTTTTTCA+AGG - chr5_1:4961596-4961615 Msa0713080:CDS 20.0%
!!! GCATTTATACTTTTTTTCAA+GGG - chr5_1:4961597-4961616 Msa0713080:CDS 20.0%
!!! AGGTTTTGTCATAAATATAA+GGG - chr5_1:4961789-4961808 Msa0713080:intron 20.0%
!!! ATTTATTTTTGAAAATGGTG+TGG - chr5_1:4962556-4962575 Msa0713080:intron 20.0%
!! ATATTCTATGTAATTCTTAC+AGG - chr5_1:4962977-4962996 Msa0713080:intron 20.0%
!! TATTCTATGTAATTCTTACA+GGG - chr5_1:4962978-4962997 Msa0713080:intron 20.0%
!!! AAGATTAACTGATGATATTT+TGG + chr5_1:4964167-4964186 None:intergenic 20.0%
!! AAATAATTTCAGTACAACTA+TGG + chr5_1:4964212-4964231 None:intergenic 20.0%
!! GAAGGTAATAAATCTAATTT+CGG - chr5_1:4964687-4964706 Msa0713080:intron 20.0%
!! AAATCTGTTTATGAATTGTT+TGG - chr5_1:4965106-4965125 Msa0713080:intron 20.0%
!!! ATATTGATTAGAAGATTAGA+CGG + chr5_1:4965550-4965569 None:intergenic 20.0%
!! GTAAATTTGATAAAATCTTG+AGG - chr5_1:4965842-4965861 Msa0713080:CDS 20.0%
!! ATATAATCGTTATAGAAACA+TGG - chr5_1:4965959-4965978 Msa0713080:intron 20.0%
!! ATACATTAATTCTTGATGTA+TGG - chr5_1:4966623-4966642 Msa0713080:CDS 20.0%
!!! ATGTAGTGTTATTTATAGAA+AGG + chr5_1:4966761-4966780 None:intergenic 20.0%
!! ATATGAAATGAAAATTTAGC+AGG + chr5_1:4966925-4966944 None:intergenic 20.0%
!! AAATATGCTATCTATGAATT+GGG + chr5_1:4967160-4967179 None:intergenic 20.0%
!! AAAATATGCTATCTATGAAT+TGG + chr5_1:4967161-4967180 None:intergenic 20.0%
!! TTAATATGCATATTACATTG+TGG - chr5_1:4967635-4967654 Msa0713080:intron 20.0%
!! CTGTTTATATAGAAATATCT+CGG - chr5_1:4967695-4967714 Msa0713080:intron 20.0%
!!! TTATTTTGAAAAAAAGCGTA+AGG + chr5_1:4968373-4968392 None:intergenic 20.0%
!! ATAAAAAATCAAGAAAAAGC+AGG + chr5_1:4968540-4968559 None:intergenic 20.0%
!! TGTTAAAAACTAGTAAACAA+AGG + chr5_1:4968698-4968717 None:intergenic 20.0%
!! ATAAATTATGGATCAAACAT+TGG - chr5_1:4969121-4969140 Msa0713080:CDS 20.0%
!!! TTTAATTTAGTATTACTGCA+GGG - chr5_1:4969357-4969376 Msa0713080:CDS 20.0%
!! GAATAAATATTCTTCGAATT+TGG - chr5_1:4969520-4969539 Msa0713080:intron 20.0%
!!! TTGATTGTAATCTTTTGAAT+GGG - chr5_1:4969964-4969983 Msa0713080:intron 20.0%
!! AGTTATTTACCTACTTTATT+TGG - chr5_1:4970029-4970048 Msa0713080:intron 20.0%
!!! CATGATTATTATAGATTTTG+TGG - chr5_1:4970398-4970417 Msa0713080:intron 20.0%
!! GTCTTTATCATAATTACATT+GGG + chr5_1:4970621-4970640 None:intergenic 20.0%
!! TGTCTTTATCATAATTACAT+TGG + chr5_1:4970622-4970641 None:intergenic 20.0%
!! AATGTAATTATGATAAAGAC+AGG - chr5_1:4970621-4970640 Msa0713080:intron 20.0%
!!! AAACTGAAATTGATTTTAGA+GGG - chr5_1:4970684-4970703 Msa0713080:intron 20.0%
!! TTTCTTATGATATTATTTGC+AGG - chr5_1:4970751-4970770 Msa0713080:intron 20.0%
!!! ACTTGATAATTGAACATAAT+TGG + chr5_1:4970904-4970923 None:intergenic 20.0%
!!! TGTTTTGAAACTGTAAGTTT+GGG + chr5_1:4958544-4958563 None:intergenic 25.0%
!! AGAGAACATTTTGCAAAAAA+TGG + chr5_1:4959376-4959395 None:intergenic 25.0%
! ATTGTGACATTGTTATGATA+TGG - chr5_1:4959675-4959694 Msa0713080:intron 25.0%
!! GTGATGAAATTTTATAGAGA+TGG + chr5_1:4959703-4959722 None:intergenic 25.0%
!!! TTAATTTTTTTTAGAGGAGC+TGG + chr5_1:4959919-4959938 None:intergenic 25.0%
! AATAACACTAAAGTTGTACA+TGG + chr5_1:4960105-4960124 None:intergenic 25.0%
! ATGTACAACTTTAGTGTTAT+TGG - chr5_1:4960104-4960123 Msa0713080:intron 25.0%
!!! AAAACTAAGTGTTGAGAAAT+GGG - chr5_1:4960161-4960180 Msa0713080:intron 25.0%
! AAATAAAACGAAAGTAGCTT+AGG + chr5_1:4960358-4960377 None:intergenic 25.0%
! TAGACAGAAATTTCTTATCA+TGG + chr5_1:4960491-4960510 None:intergenic 25.0%
! ATTAGACAATTCAATGGAAA+TGG + chr5_1:4960646-4960665 None:intergenic 25.0%
!!! GATTTAAACTTCTTTTTTGG+TGG + chr5_1:4960810-4960829 None:intergenic 25.0%
! ATGATGAAGCTCATAAAAAA+TGG - chr5_1:4960901-4960920 Msa0713080:intron 25.0%
! TGATGAAGCTCATAAAAAAT+GGG - chr5_1:4960902-4960921 Msa0713080:intron 25.0%
! AAAATGAAGAACTCAAACAT+TGG + chr5_1:4961053-4961072 None:intergenic 25.0%
! TATCAACTGAATTACAAGTA+AGG + chr5_1:4961485-4961504 None:intergenic 25.0%
! TTACTTGTAATTCAGTTGAT+AGG - chr5_1:4961484-4961503 Msa0713080:intron 25.0%
! CAGAAAATCTAACTATTTCA+CGG + chr5_1:4961545-4961564 None:intergenic 25.0%
! ATATGAAAAATCTGACAATC+TGG - chr5_1:4961571-4961590 Msa0713080:intron 25.0%
! TTAGCATCTCTTTGATATAT+TGG + chr5_1:4961697-4961716 None:intergenic 25.0%
!!! CAGGTTTTGTCATAAATATA+AGG - chr5_1:4961788-4961807 Msa0713080:intron 25.0%
! TAATACTTTCGATAGTAACT+CGG - chr5_1:4961889-4961908 Msa0713080:intron 25.0%
! TAATTTCTTGAGCTAACTTT+CGG + chr5_1:4962070-4962089 None:intergenic 25.0%
!! GTTTTATAGAAAAAGTGACT+AGG + chr5_1:4962510-4962529 None:intergenic 25.0%
! ATCAAAAGTGAAAAAAGAGA+AGG + chr5_1:4962536-4962555 None:intergenic 25.0%
!! AATTTTGAATCCATAACCTT+TGG + chr5_1:4962675-4962694 None:intergenic 25.0%
! GTTATGGATTCAAAATTTCA+TGG - chr5_1:4962678-4962697 Msa0713080:intron 25.0%
! AGTAGAAAGGTTAATATAAC+TGG + chr5_1:4962857-4962876 None:intergenic 25.0%
! ATAAGCATAAATATCTCTCA+TGG + chr5_1:4962959-4962978 None:intergenic 25.0%
! ATTACTTCCGATTTATTATC+AGG - chr5_1:4963173-4963192 Msa0713080:intron 25.0%
! ATATCATAATAGAAGTCAGA+TGG + chr5_1:4963492-4963511 None:intergenic 25.0%
! ATCTGACTTCTATTATGATA+TGG - chr5_1:4963491-4963510 Msa0713080:intron 25.0%
! AGTTTATTCTATCACTAGAT+AGG - chr5_1:4963614-4963633 Msa0713080:intron 25.0%
! GTTTATTCTATCACTAGATA+GGG - chr5_1:4963615-4963634 Msa0713080:intron 25.0%
! TGGGAAATGGTAAAATTTAA+AGG + chr5_1:4963827-4963846 None:intergenic 25.0%
!!! ATGATGATTTTGAAGTATCT+AGG - chr5_1:4964608-4964627 Msa0713080:intron 25.0%
!!! TGACTGAGGTTTTAATTATT+TGG + chr5_1:4964734-4964753 None:intergenic 25.0%
! GACAAATACTAATCACTTAA+TGG + chr5_1:4964819-4964838 None:intergenic 25.0%
! TCAAAGAATATATCTGAACT+TGG + chr5_1:4964848-4964867 None:intergenic 25.0%
! CTTTAGATTTAATAGTGCAA+AGG + chr5_1:4965154-4965173 None:intergenic 25.0%
!!! TTTTTTGTTAATAACGGTGA+TGG - chr5_1:4965326-4965345 Msa0713080:CDS 25.0%
!! AAACAAAATGGATTTGAGTT+TGG + chr5_1:4965394-4965413 None:intergenic 25.0%
! AGAACATTCTCATAACATAA+GGG - chr5_1:4965428-4965447 Msa0713080:CDS 25.0%
! AAAAAATTCGCCATTAAAGT+GGG + chr5_1:4965520-4965539 None:intergenic 25.0%
! AAAAAAATTCGCCATTAAAG+TGG + chr5_1:4965521-4965540 None:intergenic 25.0%
!! ATATACCGTAAGTTTTCAAT+TGG + chr5_1:4965660-4965679 None:intergenic 25.0%
! CAGGTACAAATAAATAAGTA+TGG + chr5_1:4965731-4965750 None:intergenic 25.0%
! AATATTACTACTTACAGGAA+GGG + chr5_1:4965816-4965835 None:intergenic 25.0%
! CTATCAATATTACTACTTAC+AGG + chr5_1:4965821-4965840 None:intergenic 25.0%
! TTCTCCATTAAAACATACTT+AGG + chr5_1:4966053-4966072 None:intergenic 25.0%
! TTAGAAATGACAGTAGTTAA+TGG + chr5_1:4966430-4966449 None:intergenic 25.0%
! TGATAAAGTTATGAGAATGT+TGG + chr5_1:4966664-4966683 None:intergenic 25.0%
! AAGAAAAAAAAACTGTGTGT+GGG + chr5_1:4966725-4966744 None:intergenic 25.0%
! TAAGAAAAAAAAACTGTGTG+TGG + chr5_1:4966726-4966745 None:intergenic 25.0%
!! TTTGCAAAAAGCATGTATTA+AGG - chr5_1:4967033-4967052 Msa0713080:intron 25.0%
!! TTGCAAAAAGCATGTATTAA+GGG - chr5_1:4967034-4967053 Msa0713080:intron 25.0%
! ATTTGGTAGAATAATGTAGT+GGG + chr5_1:4967117-4967136 None:intergenic 25.0%
! AATTTGGTAGAATAATGTAG+TGG + chr5_1:4967118-4967137 None:intergenic 25.0%
! GCATAATAGTAGAGTAAATT+TGG + chr5_1:4967134-4967153 None:intergenic 25.0%
!! ACAATTCATTCTCTTTTGTT+TGG - chr5_1:4967564-4967583 Msa0713080:intron 25.0%
!!! CAATTCATTCTCTTTTGTTT+GGG - chr5_1:4967565-4967584 Msa0713080:intron 25.0%
! AAAATAACAGAGCTCAATAT+AGG - chr5_1:4967605-4967624 Msa0713080:intron 25.0%
!! CGAGATATTTCTATATAAAC+AGG + chr5_1:4967697-4967716 None:intergenic 25.0%
!! CAAACATGAAATTGTTTTCT+AGG - chr5_1:4967794-4967813 Msa0713080:intron 25.0%
! AATTTGATCTGATGAATACA+AGG + chr5_1:4968100-4968119 None:intergenic 25.0%
!!! TACCTTTCTTATTTTCTTAC+AGG - chr5_1:4968271-4968290 Msa0713080:intron 25.0%
! AACCTGTAAGAAAATAAGAA+AGG + chr5_1:4968276-4968295 None:intergenic 25.0%
! ATGATGTTATTATGAGATAC+TGG - chr5_1:4968321-4968340 Msa0713080:intron 25.0%
!!! TGATTTTTTATGTTTGGACA+AGG - chr5_1:4968549-4968568 Msa0713080:CDS 25.0%
! AAACTAGTAAACAAAGGAAA+AGG + chr5_1:4968692-4968711 None:intergenic 25.0%
!!! TATCTTTGAAATTCTGTTTC+TGG + chr5_1:4968793-4968812 None:intergenic 25.0%
! TATATACGATCAACTAAACA+TGG - chr5_1:4968811-4968830 Msa0713080:intron 25.0%
! TCTACTCAAAATGAATAACA+AGG + chr5_1:4969159-4969178 None:intergenic 25.0%
!!! TTGTTATTCATTTTGAGTAG+AGG - chr5_1:4969158-4969177 Msa0713080:CDS 25.0%
! CTGCAGTAATACTAAATTAA+AGG + chr5_1:4969358-4969377 None:intergenic 25.0%
!! CTTTAATTTAGTATTACTGC+AGG - chr5_1:4969356-4969375 Msa0713080:CDS 25.0%
! AAAATCTAGCACTACAATAA+AGG + chr5_1:4969652-4969671 None:intergenic 25.0%
!! GAAATTGTTGCTTAAAATAG+TGG - chr5_1:4969719-4969738 Msa0713080:intron 25.0%
!!! TGCTTAAAATAGTGGATTTT+TGG - chr5_1:4969727-4969746 Msa0713080:intron 25.0%
! TAACTACTATCAATTACGAA+TGG + chr5_1:4969760-4969779 None:intergenic 25.0%
! ATGGGAATATATAATCATCT+TGG + chr5_1:4969932-4969951 None:intergenic 25.0%
! AATCAAGATCCCTTAATTAT+GGG + chr5_1:4969950-4969969 None:intergenic 25.0%
!! CTTGATTGTAATCTTTTGAA+TGG - chr5_1:4969963-4969982 Msa0713080:intron 25.0%
!! ATTTAGGTTCATGCTTAAAA+CGG - chr5_1:4969996-4970015 Msa0713080:intron 25.0%
! CTAAATTTGCACATTTATGT+AGG - chr5_1:4970167-4970186 Msa0713080:intron 25.0%
! TTATAGATTCAAACTCTTGT+AGG - chr5_1:4970310-4970329 Msa0713080:intron 25.0%
!!! GAAACTGAAATTGATTTTAG+AGG - chr5_1:4970683-4970702 Msa0713080:intron 25.0%
! CAATTATCAAGTAATCATGT+CGG - chr5_1:4970912-4970931 Msa0713080:intron 25.0%
AAGTTTGGGGATCTAAATAT+TGG + chr5_1:4958530-4958549 None:intergenic 30.0%
!!! GTTTTGAAACTGTAAGTTTG+GGG + chr5_1:4958543-4958562 None:intergenic 30.0%
!!! GTGTTTTGAAACTGTAAGTT+TGG + chr5_1:4958545-4958564 None:intergenic 30.0%
ATTCTGTCAGAAAAGAAAGA+AGG - chr5_1:4959471-4959490 Msa0713080:intron 30.0%
! ACAACTTTAGTGTTATTGGT+TGG - chr5_1:4960108-4960127 Msa0713080:intron 30.0%
!! CAAAACTAAGTGTTGAGAAA+TGG - chr5_1:4960160-4960179 Msa0713080:intron 30.0%
!! AAACTAAGTGTTGAGAAATG+GGG - chr5_1:4960162-4960181 Msa0713080:intron 30.0%
AGTGTATTTGATTCTTATCG+TGG - chr5_1:4960307-4960326 Msa0713080:intron 30.0%
!!! ACGCAATTAGTTTTTTCTCA+AGG - chr5_1:4960567-4960586 Msa0713080:intron 30.0%
TGGTGAATTAGACAATTCAA+TGG + chr5_1:4960652-4960671 None:intergenic 30.0%
! TTTTTATGAGCTTCATCATC+AGG + chr5_1:4960900-4960919 None:intergenic 30.0%
GATGAAGCTCATAAAAAATG+GGG - chr5_1:4960903-4960922 Msa0713080:intron 30.0%
! ATTTTTCTGTTGAAACTTGC+AGG - chr5_1:4961140-4961159 Msa0713080:CDS 30.0%
GGACAAACAATGTAATGATA+AGG - chr5_1:4961161-4961180 Msa0713080:CDS 30.0%
AATACTTTCGATAGTAACTC+GGG - chr5_1:4961890-4961909 Msa0713080:intron 30.0%
TATATTCTGCCAAGCTTAAT+TGG - chr5_1:4961939-4961958 Msa0713080:intron 30.0%
AATTTCTTGAGCTAACTTTC+GGG + chr5_1:4962069-4962088 None:intergenic 30.0%
GAAAGTTAGCTCAAGAAATT+AGG - chr5_1:4962069-4962088 Msa0713080:intron 30.0%
AGAAATTAGGATTGTTGAAG+CGG - chr5_1:4962082-4962101 Msa0713080:intron 30.0%
! ATCTAGAGTATGAACCAATT+CGG - chr5_1:4962166-4962185 Msa0713080:intron 30.0%
ACCCTAAATAAAATCAGGAA+GGG + chr5_1:4962323-4962342 None:intergenic 30.0%
ATGAGACCCTAAATAAAATC+AGG + chr5_1:4962328-4962347 None:intergenic 30.0%
! TACTATTCAACTGCTATTTG+TGG - chr5_1:4962380-4962399 Msa0713080:intron 30.0%
TTGATTCTTTCCAAAGGTTA+TGG - chr5_1:4962662-4962681 Msa0713080:intron 30.0%
TAATAGATCATGCCATGAAA+GGG + chr5_1:4962726-4962745 None:intergenic 30.0%
ATAATAGATCATGCCATGAA+AGG + chr5_1:4962727-4962746 None:intergenic 30.0%
! ATACTCACAAGCAAGTTTTA+AGG + chr5_1:4962832-4962851 None:intergenic 30.0%
! TTAAAACTTGCTTGTGAGTA+TGG - chr5_1:4962831-4962850 Msa0713080:intron 30.0%
GAAGGAGAACAAAAACATAT+TGG - chr5_1:4963002-4963021 Msa0713080:intron 30.0%
!! ACTTTTTGCTATCAGTTGTT+AGG + chr5_1:4963046-4963065 None:intergenic 30.0%
CTTGAATTCTGTAAAACCAT+TGG + chr5_1:4963079-4963098 None:intergenic 30.0%
TGGACAACCTGATAATAAAT+CGG + chr5_1:4963183-4963202 None:intergenic 30.0%
!! AACACTGACTTTCTCTATTA+TGG + chr5_1:4963277-4963296 None:intergenic 30.0%
TGTTAGATATAGAACACCTA+AGG - chr5_1:4963293-4963312 Msa0713080:intron 30.0%
!!! TAATTGCCAGTTGTTTTTTC+TGG - chr5_1:4963423-4963442 Msa0713080:intron 30.0%
!!! AATTGCCAGTTGTTTTTTCT+GGG - chr5_1:4963424-4963443 Msa0713080:intron 30.0%
! ACATACCTGTTGGTATTTTA+CGG + chr5_1:4963542-4963561 None:intergenic 30.0%
!!! GACGATTTTTTAGCTAAAAC+TGG + chr5_1:4963782-4963801 None:intergenic 30.0%
! TTAAAGGTGTATCATATGAC+AGG + chr5_1:4963811-4963830 None:intergenic 30.0%
CTGAAATTGCACTTTGTTAA+AGG + chr5_1:4963868-4963887 None:intergenic 30.0%
GCATTACTAGATCTTTATTC+TGG - chr5_1:4964106-4964125 Msa0713080:intron 30.0%
ATCATCAGTTAATCTTGTCA+CGG - chr5_1:4964171-4964190 Msa0713080:intron 30.0%
ATAAAATTCCATTACGGTCA+AGG - chr5_1:4964536-4964555 Msa0713080:intron 30.0%
AGGATTGTTGATATATGCTA+CGG - chr5_1:4964628-4964647 Msa0713080:intron 30.0%
GAAACATGGTCTATATTTGA+AGG - chr5_1:4964669-4964688 Msa0713080:intron 30.0%
! ATCTAATTTCGGTCAACTTT+TGG - chr5_1:4964698-4964717 Msa0713080:intron 30.0%
TTGAAGTAGTATTGCAGATA+TGG - chr5_1:4964756-4964775 Msa0713080:intron 30.0%
!!! TTGCTTGCATGTTTTTAGAT+AGG - chr5_1:4964779-4964798 Msa0713080:intron 30.0%
!!! TGCTTGCATGTTTTTAGATA+GGG - chr5_1:4964780-4964799 Msa0713080:intron 30.0%
! TCTTTCTCTTTTACCGATAA+AGG + chr5_1:4964948-4964967 None:intergenic 30.0%
!!! GTCGCATCATTTTTTTAATG+TGG + chr5_1:4965058-4965077 None:intergenic 30.0%
TCTGTTTATGAATTGTTTGG+TGG - chr5_1:4965109-4965128 Msa0713080:intron 30.0%
GTAAAAGATATTGCAATGAC+TGG + chr5_1:4965195-4965214 None:intergenic 30.0%
!!! GGTGATGGAATAAAATGTTT+TGG - chr5_1:4965341-4965360 Msa0713080:CDS 30.0%
GAGAACATTCTCATAACATA+AGG - chr5_1:4965427-4965446 Msa0713080:CDS 30.0%
AAAAATTCGCCATTAAAGTG+GGG + chr5_1:4965519-4965538 None:intergenic 30.0%
! GCTTGATTCTTTTCAATGAT+TGG - chr5_1:4965681-4965700 Msa0713080:intron 30.0%
ATATTACTACTTACAGGAAG+GGG + chr5_1:4965815-4965834 None:intergenic 30.0%
CAATATTACTACTTACAGGA+AGG + chr5_1:4965817-4965836 None:intergenic 30.0%
! TTGTTGCTTAAAATTGTTGC+AGG - chr5_1:4965887-4965906 Msa0713080:CDS 30.0%
! TGTTGCTTAAAATTGTTGCA+GGG - chr5_1:4965888-4965907 Msa0713080:CDS 30.0%
!! GAAGCCTAAGTATGTTTTAA+TGG - chr5_1:4966046-4966065 Msa0713080:intron 30.0%
!!! GTATGTTTTAATGGAGAATG+TGG - chr5_1:4966055-4966074 Msa0713080:intron 30.0%
TGACATATTGAGATTTGACA+AGG - chr5_1:4966079-4966098 Msa0713080:intron 30.0%
GACATATTGAGATTTGACAA+GGG - chr5_1:4966080-4966099 Msa0713080:intron 30.0%
TTAAGTAAACCTGATGAACA+TGG - chr5_1:4966242-4966261 Msa0713080:intron 30.0%
!! TTTTTGTTTCCATGTTCATC+AGG + chr5_1:4966254-4966273 None:intergenic 30.0%
! ATAGATGTTCCATCAGTTTT+AGG - chr5_1:4966544-4966563 Msa0713080:intron 30.0%
TCAGAAAGAAGAAAAAAGAG+TGG + chr5_1:4966600-4966619 None:intergenic 30.0%
TACAACATGTCACATAGTTT+AGG + chr5_1:4966856-4966875 None:intergenic 30.0%
CATTTACCTATGTTATTCCA+AGG - chr5_1:4966949-4966968 Msa0713080:intron 30.0%
TGTAAACCTTGGAATAACAT+AGG + chr5_1:4966958-4966977 None:intergenic 30.0%
AAATGGTAAACAAGAGTTGT+GGG + chr5_1:4966981-4967000 None:intergenic 30.0%
TAAATGGTAAACAAGAGTTG+TGG + chr5_1:4966982-4967001 None:intergenic 30.0%
!! TTTAGTGAAAGTATCAGAAG+CGG + chr5_1:4967008-4967027 None:intergenic 30.0%
GATCACAGCATTAAAATTTG+TGG + chr5_1:4967072-4967091 None:intergenic 30.0%
! TTTTGCACACTTGAAATCAA+TGG + chr5_1:4967293-4967312 None:intergenic 30.0%
! CATACTTTTGGCAATAAGTT+TGG + chr5_1:4967360-4967379 None:intergenic 30.0%
CAAACTTATTGCCAAAAGTA+TGG - chr5_1:4967358-4967377 Msa0713080:intron 30.0%
ATGTGCAACATACTACTTAA+GGG - chr5_1:4967449-4967468 Msa0713080:intron 30.0%
! GATTTCAGAACGTTTTACAT+TGG - chr5_1:4967525-4967544 Msa0713080:intron 30.0%
!! ATTCTCTTTTGTTTGGGATT+GGG - chr5_1:4967571-4967590 Msa0713080:intron 30.0%
! TTCAGCCCAAACATAAATTT+TGG - chr5_1:4967852-4967871 Msa0713080:intron 30.0%
CACGTCCAAAATTTATGTTT+GGG + chr5_1:4967860-4967879 None:intergenic 30.0%
ACACGTCCAAAATTTATGTT+TGG + chr5_1:4967861-4967880 None:intergenic 30.0%
AGTGCAATTGATATGTTTCT+TGG + chr5_1:4968154-4968173 None:intergenic 30.0%
CTCATAATAACATCATGTGA+TGG + chr5_1:4968317-4968336 None:intergenic 30.0%
AAAATCAAGAAAAAGCAGGT+CGG + chr5_1:4968536-4968555 None:intergenic 30.0%
GTTACAAATTATGCACTCAA+GGG + chr5_1:4968849-4968868 None:intergenic 30.0%
AGTTACAAATTATGCACTCA+AGG + chr5_1:4968850-4968869 None:intergenic 30.0%
!! ATAAATACCAGCTGATTTTC+TGG - chr5_1:4968990-4969009 Msa0713080:intron 30.0%
GATGAAAAACAAAGGAAAAC+TGG + chr5_1:4969055-4969074 None:intergenic 30.0%
CAGCATATGATGAAAAACAA+AGG + chr5_1:4969063-4969082 None:intergenic 30.0%
ATTAAAGGTTGTTCAACGAA+TGG + chr5_1:4969343-4969362 None:intergenic 30.0%
CAATCAAGATCCCTTAATTA+TGG + chr5_1:4969951-4969970 None:intergenic 30.0%
! ATTGTAATCTTTTGAATGGG+AGG - chr5_1:4969967-4969986 Msa0713080:intron 30.0%
TTTCAGTTCTATAGTCTGTA+TGG - chr5_1:4970109-4970128 Msa0713080:intron 30.0%
TTACAGTAGTCACATAAAGT+TGG - chr5_1:4970283-4970302 Msa0713080:intron 30.0%
TCAAAATTCGGTATGATAGT+AGG + chr5_1:4970490-4970509 None:intergenic 30.0%
!! ATTGTAGACCCTCTAAAATT+TGG - chr5_1:4970509-4970528 Msa0713080:intron 30.0%
!! TTGTAGACCCTCTAAAATTT+GGG - chr5_1:4970510-4970529 Msa0713080:intron 30.0%
! ACCAAAACCCAAATTTTAGA+GGG + chr5_1:4970520-4970539 None:intergenic 30.0%
! AACCAAAACCCAAATTTTAG+AGG + chr5_1:4970521-4970540 None:intergenic 30.0%
!! GGTATCACTTTTACAAAACA+GGG + chr5_1:4970549-4970568 None:intergenic 30.0%
!! AGGTATCACTTTTACAAAAC+AGG + chr5_1:4970550-4970569 None:intergenic 30.0%
ACAAATCAGAATCATGTAAC+TGG + chr5_1:4970584-4970603 None:intergenic 30.0%
TAATTGGAAAGAGAGAACTT+GGG + chr5_1:4970888-4970907 None:intergenic 30.0%
ATAATTGGAAAGAGAGAACT+TGG + chr5_1:4970889-4970908 None:intergenic 30.0%
AACATCTTTCGACTCAAAAA+TGG + chr5_1:4971045-4971064 None:intergenic 30.0%
AACATCTTTCGACTCAAAAA+TGG + chr5_1:4971045-4971064 None:intergenic 30.0%
!! AACATTTTTCGACTCAGAAA+TGG + chr5_1:4971210-4971229 None:intergenic 30.0%
ATTTCTGAGTCGAAAAATGT+TGG - chr5_1:4971209-4971228 Msa0713080:CDS 30.0%
ATCTTTCGACTCAAGAATAA+TGG + chr5_1:4971240-4971259 None:intergenic 30.0%
AACATCTTTCGACTCAAAAA+GGG + chr5_1:4971045-4971064 None:intergenic 30.0%
!! AGTTGATAATTGGATCGGTT+AGG + chr5_1:4958601-4958620 None:intergenic 35.0%
!! GGAGAAGTTGATAATTGGAT+CGG + chr5_1:4958606-4958625 None:intergenic 35.0%
CTCTTCTTCTTGTTCTGTTA+AGG - chr5_1:4958856-4958875 Msa0713080:CDS 35.0%
ACGTCATAGAGAGATTTAGT+TGG - chr5_1:4959147-4959166 Msa0713080:intron 35.0%
GTTCACCGCTTAGATATTTA+TGG - chr5_1:4959420-4959439 Msa0713080:intron 35.0%
CTAATCAGTAGAAGCAGTTA+AGG - chr5_1:4959501-4959520 Msa0713080:CDS 35.0%
AGCAGTTAAGGAAACCAATA+TGG - chr5_1:4959513-4959532 Msa0713080:CDS 35.0%
GATACAAAATGGAGTTGTAG+CGG - chr5_1:4959821-4959840 Msa0713080:intron 35.0%
ATACAAAATGGAGTTGTAGC+GGG - chr5_1:4959822-4959841 Msa0713080:intron 35.0%
ACTAAAGTTGTACATGGCTT+GGG + chr5_1:4960099-4960118 None:intergenic 35.0%
GAAGAACTCGATCTTCAAAT+GGG - chr5_1:4960535-4960554 Msa0713080:CDS 35.0%
! TCTTTTCGTGAACTACCTTT+GGG + chr5_1:4960602-4960621 None:intergenic 35.0%
! TTCTTTTCGTGAACTACCTT+TGG + chr5_1:4960603-4960622 None:intergenic 35.0%
TGAATTGTCTAATTCACCAG+TGG - chr5_1:4960653-4960672 Msa0713080:CDS 35.0%
CAGTTTATATCGTCAACTTC+AGG + chr5_1:4960690-4960709 None:intergenic 35.0%
TCAACGAAAGGATGTATGTA+TGG - chr5_1:4960840-4960859 Msa0713080:intron 35.0%
CAACGAAAGGATGTATGTAT+GGG - chr5_1:4960841-4960860 Msa0713080:intron 35.0%
AGAAACATTCCGTCATTCAT+TGG - chr5_1:4960864-4960883 Msa0713080:intron 35.0%
ATTGGATCACCAATGAATGA+CGG + chr5_1:4960876-4960895 None:intergenic 35.0%
AAGCTCATAAAAAATGGGGA+TGG - chr5_1:4960907-4960926 Msa0713080:intron 35.0%
! CTTGTTATGGGAAATGGAAA+TGG + chr5_1:4961026-4961045 None:intergenic 35.0%
TTCCATTTCCCATAACAAGT+TGG - chr5_1:4961027-4961046 Msa0713080:intron 35.0%
!! AACATTGGCCAACTTGTTAT+GGG + chr5_1:4961038-4961057 None:intergenic 35.0%
!! AAACATTGGCCAACTTGTTA+TGG + chr5_1:4961039-4961058 None:intergenic 35.0%
! ACATTGCTGATATGATAGTG+AGG - chr5_1:4961295-4961314 Msa0713080:intron 35.0%
ATTATGCCCAAGCTATCATT+GGG - chr5_1:4961354-4961373 Msa0713080:intron 35.0%
AAACACTGTTTGTAGCTGTA+TGG - chr5_1:4961434-4961453 Msa0713080:CDS 35.0%
TGTAGCTGTATGGAATACAA+AGG - chr5_1:4961444-4961463 Msa0713080:CDS 35.0%
!! ATTCAGTTGATAGGTGTACT+CGG - chr5_1:4961493-4961512 Msa0713080:intron 35.0%
TCCAGAAAATAGTCCATTTC+GGG + chr5_1:4961632-4961651 None:intergenic 35.0%
CTCCAGAAAATAGTCCATTT+CGG + chr5_1:4961633-4961652 None:intergenic 35.0%
! ATTTGAGGCATAAGGTTGTT+CGG - chr5_1:4961762-4961781 Msa0713080:intron 35.0%
AGAGATGAGAAGACTGTAAT+CGG + chr5_1:4961836-4961855 None:intergenic 35.0%
GATTTGTATCATTGACCGAA+GGG + chr5_1:4961973-4961992 None:intergenic 35.0%
! TGATTTGTATCATTGACCGA+AGG + chr5_1:4961974-4961993 None:intergenic 35.0%
! TAACTCTTAGATTTTGGGCT+AGG - chr5_1:4962032-4962051 Msa0713080:intron 35.0%
ATACTCTAGATGTCTACTTG+TGG + chr5_1:4962157-4962176 None:intergenic 35.0%
!! TGTCTAGTTCTAAGCATGAA+GGG + chr5_1:4962209-4962228 None:intergenic 35.0%
!! ATGTCTAGTTCTAAGCATGA+AGG + chr5_1:4962210-4962229 None:intergenic 35.0%
ACAAAGGGTAAGATTGTACT+GGG + chr5_1:4962269-4962288 None:intergenic 35.0%
CTAAATAAAATCAGGAAGGG+GGG + chr5_1:4962320-4962339 None:intergenic 35.0%
CCTAAATAAAATCAGGAAGG+GGG + chr5_1:4962321-4962340 None:intergenic 35.0%
CCCTAAATAAAATCAGGAAG+GGG + chr5_1:4962322-4962341 None:intergenic 35.0%
!! CCCCTTCCTGATTTTATTTA+GGG - chr5_1:4962319-4962338 Msa0713080:intron 35.0%
GACCCTAAATAAAATCAGGA+AGG + chr5_1:4962324-4962343 None:intergenic 35.0%
!!! TTTTAACTTCCTTGCCTACA+TGG - chr5_1:4962348-4962367 Msa0713080:intron 35.0%
! GAGATCTGTGTTGTTAATAG+CGG + chr5_1:4962472-4962491 None:intergenic 35.0%
TGCAAGTGATTTAACTAGCT+GGG - chr5_1:4962615-4962634 Msa0713080:intron 35.0%
CTCTGTTTGATTCTTTCCAA+AGG - chr5_1:4962656-4962675 Msa0713080:intron 35.0%
TTCTTCATAGGACAGTAGAA+AGG + chr5_1:4962870-4962889 None:intergenic 35.0%
!!! TCACGAGATTTTGAGATACA+CGG + chr5_1:4962925-4962944 None:intergenic 35.0%
ATGTAATTCTTACAGGGTGA+AGG - chr5_1:4962984-4963003 Msa0713080:intron 35.0%
!! AAAAGTATTTCCGAGTCCAA+TGG - chr5_1:4963060-4963079 Msa0713080:intron 35.0%
TTCTGTAAAACCATTGGACT+CGG + chr5_1:4963073-4963092 None:intergenic 35.0%
CATGATAATCACCTTCATCT+TGG + chr5_1:4963203-4963222 None:intergenic 35.0%
AAGGTGATTATCATGACAAG+AGG - chr5_1:4963208-4963227 Msa0713080:intron 35.0%
ATAGAACACCTAAGGTATGA+TGG - chr5_1:4963301-4963320 Msa0713080:intron 35.0%
ACAGATATCCATCATACCTT+AGG + chr5_1:4963312-4963331 None:intergenic 35.0%
!! GGTATGATGGATATCTGTTA+AGG - chr5_1:4963314-4963333 Msa0713080:intron 35.0%
! TCATCAGATGAAAGTATGAG+CGG + chr5_1:4963351-4963370 None:intergenic 35.0%
CTCATACTTTCATCTGATGA+GGG - chr5_1:4963351-4963370 Msa0713080:intron 35.0%
ACATTCCGTAAAATACCAAC+AGG - chr5_1:4963534-4963553 Msa0713080:intron 35.0%
!! AAAGAAGACCAAAAGCATCT+TGG + chr5_1:4963576-4963595 None:intergenic 35.0%
TCTATCACTAGATAGGGAAA+AGG - chr5_1:4963621-4963640 Msa0713080:intron 35.0%
ACTAGATAGGGAAAAGGAAA+TGG - chr5_1:4963627-4963646 Msa0713080:intron 35.0%
CTAGATAGGGAAAAGGAAAT+GGG - chr5_1:4963628-4963647 Msa0713080:intron 35.0%
AATATTGAGCACATGGGAAA+TGG + chr5_1:4963840-4963859 None:intergenic 35.0%
! AAAATGCAAGTTGAGATGCT+CGG - chr5_1:4963899-4963918 Msa0713080:CDS 35.0%
TCTTGTCACGGTATTATACA+TGG - chr5_1:4964183-4964202 Msa0713080:intron 35.0%
ATACACTGATCCACTAATTC+TGG - chr5_1:4964263-4964282 Msa0713080:CDS 35.0%
CTATGCAAACGGTATAATGT+TGG - chr5_1:4964502-4964521 Msa0713080:intron 35.0%
! CCATGTTTCTCTGTTTTACT+GGG + chr5_1:4964658-4964677 None:intergenic 35.0%
! ACCATGTTTCTCTGTTTTAC+TGG + chr5_1:4964659-4964678 None:intergenic 35.0%
ATACTACTTCAAGATGACTG+AGG + chr5_1:4964748-4964767 None:intergenic 35.0%
TAATTAGAGGTTGACAACTG+TGG - chr5_1:4964881-4964900 Msa0713080:intron 35.0%
AATTAGAGGTTGACAACTGT+GGG - chr5_1:4964882-4964901 Msa0713080:intron 35.0%
! GACAACTGTGGGTTATAAAA+AGG - chr5_1:4964893-4964912 Msa0713080:intron 35.0%
! ACTTTGTTTCCTGCCTTTAT+CGG - chr5_1:4964932-4964951 Msa0713080:intron 35.0%
AAGCGAGATTTAAACGAAGA+CGG - chr5_1:4964979-4964998 Msa0713080:intron 35.0%
CAATGACTGGATACTCAAAA+GGG + chr5_1:4965182-4965201 None:intergenic 35.0%
AAAATTCGCCATTAAAGTGG+GGG + chr5_1:4965518-4965537 None:intergenic 35.0%
ACGATGAAAGTGAAGATACA+TGG - chr5_1:4965631-4965650 Msa0713080:intron 35.0%
CGATGAAAGTGAAGATACAT+GGG - chr5_1:4965632-4965651 Msa0713080:intron 35.0%
GGGAACCAATTGAAAACTTA+CGG - chr5_1:4965652-4965671 Msa0713080:intron 35.0%
TATCCACTAATTCCTTGACA+AGG + chr5_1:4965942-4965961 None:intergenic 35.0%
TAGAAACATGGAATCACCAT+TGG - chr5_1:4965971-4965990 Msa0713080:intron 35.0%
TGATTTCTTTCATCGTCCAA+TGG + chr5_1:4965990-4966009 None:intergenic 35.0%
! TCACCAGATAGTAGTTTTCA+TGG - chr5_1:4966007-4966026 Msa0713080:intron 35.0%
TGTCCATGAAAACTACTATC+TGG + chr5_1:4966013-4966032 None:intergenic 35.0%
ATGCATTACCAAGCAAGATT+GGG - chr5_1:4966140-4966159 Msa0713080:intron 35.0%
AAAACACGCAATCGAAATTG+TGG + chr5_1:4966194-4966213 None:intergenic 35.0%
GGTTTACTTAATACCTCATC+AGG + chr5_1:4966233-4966252 None:intergenic 35.0%
AGAGTTGGGTCAATTAACAT+AGG + chr5_1:4966324-4966343 None:intergenic 35.0%
TGTTAATTGACCCAACTCTA+AGG - chr5_1:4966325-4966344 Msa0713080:intron 35.0%
GTTAATTGACCCAACTCTAA+GGG - chr5_1:4966326-4966345 Msa0713080:intron 35.0%
TATTGTCTTCCCTTAGAGTT+GGG + chr5_1:4966338-4966357 None:intergenic 35.0%
ATATTGTCTTCCCTTAGAGT+TGG + chr5_1:4966339-4966358 None:intergenic 35.0%
TACTTTGGCTACTATTCTTG+AGG + chr5_1:4966467-4966486 None:intergenic 35.0%
CAGCAACTGGAAAAATACTT+TGG + chr5_1:4966482-4966501 None:intergenic 35.0%
! AAGTATTTTTCCAGTTGCTG+AGG - chr5_1:4966482-4966501 Msa0713080:intron 35.0%
AGAATCATGCCTAAAACTGA+TGG + chr5_1:4966556-4966575 None:intergenic 35.0%
! AAGTTATGAGAATGTTGGCT+TGG + chr5_1:4966659-4966678 None:intergenic 35.0%
ATTCAAGCAAGGTGATGAAA+TGG + chr5_1:4966790-4966809 None:intergenic 35.0%
GTCACATAGTTTAGGTATCT+TGG + chr5_1:4966848-4966867 None:intergenic 35.0%
GATACAAACTAGCATTCTCT+TGG + chr5_1:4966903-4966922 None:intergenic 35.0%
GTATCAGAAGCGGAAATAAA+TGG + chr5_1:4966998-4967017 None:intergenic 35.0%
!! TAATGTAGTGGGTCTTAGAA+GGG + chr5_1:4967106-4967125 None:intergenic 35.0%
!! ATAATGTAGTGGGTCTTAGA+AGG + chr5_1:4967107-4967126 None:intergenic 35.0%
ATGCTATCTATGAATTGGGT+AGG + chr5_1:4967156-4967175 None:intergenic 35.0%
TAATAGTTGACACCATGGTT+GGG + chr5_1:4967270-4967289 None:intergenic 35.0%
AATGGTAATAGTTGACACCA+TGG + chr5_1:4967275-4967294 None:intergenic 35.0%
! AGCAAGAGTTTCCATACTTT+TGG + chr5_1:4967372-4967391 None:intergenic 35.0%
!! GCTTGTTTTTCACTAATCCT+AGG - chr5_1:4967389-4967408 Msa0713080:intron 35.0%
GATGTGCAACATACTACTTA+AGG - chr5_1:4967448-4967467 Msa0713080:intron 35.0%
!! CATTCTCTTTTGTTTGGGAT+TGG - chr5_1:4967570-4967589 Msa0713080:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr5_1:4967939-4967958 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr5_1:4967938-4967957 Msa0713080:intron 35.0%
! GTCCAATCATTTTCTACCAA+GGG - chr5_1:4968048-4968067 Msa0713080:intron 35.0%
ATGAGTAAAATTGATGCCCT+TGG + chr5_1:4968067-4968086 None:intergenic 35.0%
ATGTGATGGCAATGGAAATT+GGG + chr5_1:4968303-4968322 None:intergenic 35.0%
ATAACATCATGTGATGGCAA+TGG + chr5_1:4968311-4968330 None:intergenic 35.0%
ATTAATACCTCAAACTCAGG+CGG + chr5_1:4968350-4968369 None:intergenic 35.0%
AGGATTAATACCTCAAACTC+AGG + chr5_1:4968353-4968372 None:intergenic 35.0%
!! TCTCTATTTTTCACCAGCTT+TGG - chr5_1:4968407-4968426 Msa0713080:intron 35.0%
! CAATACTGTTGCTTATGATG+AGG - chr5_1:4968445-4968464 Msa0713080:intron 35.0%
!! AGGTCACAAACTTTGAAACT+CGG - chr5_1:4968743-4968762 Msa0713080:CDS 35.0%
!!! ATTCTGTTTCTGGAGGATTT+TGG + chr5_1:4968783-4968802 None:intergenic 35.0%
!! CTTTGAAATTCTGTTTCTGG+AGG + chr5_1:4968790-4968809 None:intergenic 35.0%
GTGTCCCATATACTAGTTAA+TGG - chr5_1:4969029-4969048 Msa0713080:CDS 35.0%
CTGGCCATTAACTAGTATAT+GGG + chr5_1:4969036-4969055 None:intergenic 35.0%
ACTGGCCATTAACTAGTATA+TGG + chr5_1:4969037-4969056 None:intergenic 35.0%
CTTTGTTGCTCCATTTAATG+TGG + chr5_1:4969193-4969212 None:intergenic 35.0%
TCATCTTCAGACATAAAGAG+GGG + chr5_1:4969243-4969262 None:intergenic 35.0%
GTCATCTTCAGACATAAAGA+GGG + chr5_1:4969244-4969263 None:intergenic 35.0%
AGTCATCTTCAGACATAAAG+AGG + chr5_1:4969245-4969264 None:intergenic 35.0%
GTGTTTGTCAAATTCCCAAA+CGG - chr5_1:4969271-4969290 Msa0713080:CDS 35.0%
! AGCAATGGAATTTTCTCTGT+TGG + chr5_1:4969444-4969463 None:intergenic 35.0%
AAAATTCCATTGCTACCATC+TGG - chr5_1:4969450-4969469 Msa0713080:intron 35.0%
!!! TACCTTATAGGTTGCTTTTG+TGG + chr5_1:4969564-4969583 None:intergenic 35.0%
CAAAAGCAACCTATAAGGTA+AGG - chr5_1:4969564-4969583 Msa0713080:intron 35.0%
AAAGTAGTCCTTATAAGGCT+GGG + chr5_1:4969594-4969613 None:intergenic 35.0%
TGGACAAAGTAGTCCTTATA+AGG + chr5_1:4969599-4969618 None:intergenic 35.0%
GAATGGGAGGTTATCTATTT+AGG - chr5_1:4969980-4969999 Msa0713080:intron 35.0%
! TACCTACTTTATTTGGTCTC+AGG - chr5_1:4970036-4970055 Msa0713080:intron 35.0%
CATAAGTGAAGCAGTAATCT+GGG + chr5_1:4970063-4970082 None:intergenic 35.0%
TCATAAGTGAAGCAGTAATC+TGG + chr5_1:4970064-4970083 None:intergenic 35.0%
TTACTGCTTCACTTATGAAC+AGG - chr5_1:4970066-4970085 Msa0713080:intron 35.0%
TACTGCTTCACTTATGAACA+GGG - chr5_1:4970067-4970086 Msa0713080:intron 35.0%
GAACTGAAAAAATCACCTCT+TGG + chr5_1:4970098-4970117 None:intergenic 35.0%
GAGGGTCTACAATCAAAATT+CGG + chr5_1:4970502-4970521 None:intergenic 35.0%
!!! ACCCTCTAAAATTTGGGTTT+TGG - chr5_1:4970516-4970535 Msa0713080:intron 35.0%
AATCAGAATCATGTAACTGG+TGG + chr5_1:4970581-4970600 None:intergenic 35.0%
CAACTGCATTTCCAATTTGA+CGG + chr5_1:4970779-4970798 None:intergenic 35.0%
CTTTCTATGTGCAATTCCTA+GGG + chr5_1:4970832-4970851 None:intergenic 35.0%
AACATCCTTCGACTCAAAAA+AGG + chr5_1:4970946-4970965 None:intergenic 35.0%
ATCTTTCGACTCAAGAATAG+TGG + chr5_1:4971009-4971028 None:intergenic 35.0%
ATTCTTGAGTCGAAAGATGT+TGG - chr5_1:4971011-4971030 Msa0713080:intron 35.0%
!!! AACATCTTTTGGCTCAAGAA+TGG + chr5_1:4970979-4970998 None:intergenic 35.0%
ATTCTTGAGCCAAAAGATGT+TGG - chr5_1:4971077-4971096 Msa0713080:CDS 35.0%
ATCTTTCGACTCAAGAATAG+TGG + chr5_1:4971009-4971028 None:intergenic 35.0%
ATTCTTGAGTCGAAAGATGT+TGG - chr5_1:4971011-4971030 Msa0713080:intron 35.0%
ATTCTTGAGTCGAAAGATGT+CGG - chr5_1:4971011-4971030 Msa0713080:intron 35.0%
CAACATCTTTCGACTCAAAA+AGG + chr5_1:4971277-4971296 None:intergenic 35.0%
!!! CTTTTTGAGTCGAAAGATGT+TGG - chr5_1:4971275-4971294 Msa0713080:CDS 35.0%
TGATAATTGGATCGGTTAGG+TGG + chr5_1:4958598-4958617 None:intergenic 40.0%
CACATTGCCGTCAATTACAT+CGG + chr5_1:4958726-4958745 None:intergenic 40.0%
GTTCTAACGGAAAATCTGGA+AGG - chr5_1:4958747-4958766 Msa0713080:CDS 40.0%
GGAAAATCTGGAAGGAAGAA+AGG - chr5_1:4958755-4958774 Msa0713080:CDS 40.0%
AATCTGGAAGGAAGAAAGGT+AGG - chr5_1:4958759-4958778 Msa0713080:CDS 40.0%
ATCTGGAAGGAAGAAAGGTA+GGG - chr5_1:4958760-4958779 Msa0713080:CDS 40.0%
!! TTCTGAGATGAAATTGTCCG+AGG - chr5_1:4958784-4958803 Msa0713080:CDS 40.0%
TCAGATGCACCTGATAATCT+CGG + chr5_1:4958827-4958846 None:intergenic 40.0%
AGATTATCAGGTGCATCTGA+CGG - chr5_1:4958827-4958846 Msa0713080:CDS 40.0%
GCACAAAATGGAGTTGTAGA+GGG + chr5_1:4959897-4959916 None:intergenic 40.0%
CTAAAGTTGTACATGGCTTG+GGG + chr5_1:4960098-4960117 None:intergenic 40.0%
CACTAAAGTTGTACATGGCT+TGG + chr5_1:4960100-4960119 None:intergenic 40.0%
GCAAGGACATTTGATATGTC+AGG + chr5_1:4960210-4960229 None:intergenic 40.0%
AGTACAACGCAGCTAGTAAA+AGG + chr5_1:4960235-4960254 None:intergenic 40.0%
AAACGAAAGTAGCTTAGGTC+AGG + chr5_1:4960353-4960372 None:intergenic 40.0%
CGAAGAACTCGATCTTCAAA+TGG - chr5_1:4960534-4960553 Msa0713080:CDS 40.0%
TCAAGGAAAAAGAACCCCAA+AGG - chr5_1:4960584-4960603 Msa0713080:intron 40.0%
! CTTTTCGTGAACTACCTTTG+GGG + chr5_1:4960601-4960620 None:intergenic 40.0%
TTTGCCTCGTCTGTGTTAAA+AGG - chr5_1:4960780-4960799 Msa0713080:intron 40.0%
TCATCTGCTTCATCAACGAA+AGG - chr5_1:4960828-4960847 Msa0713080:intron 40.0%
TGAGCTTCATCATCAGGTAT+TGG + chr5_1:4960894-4960913 None:intergenic 40.0%
GCGATTTCAATGCTCTTTCT+CGG - chr5_1:4961230-4961249 Msa0713080:intron 40.0%
CAATGATAGCTTGGGCATAA+TGG + chr5_1:4961355-4961374 None:intergenic 40.0%
CATTATGCCCAAGCTATCAT+TGG - chr5_1:4961353-4961372 Msa0713080:intron 40.0%
ACTATTTCACGGTCTTTCAG+TGG + chr5_1:4961534-4961553 None:intergenic 40.0%
CCAGAAAATAGTCCATTTCG+GGG + chr5_1:4961631-4961650 None:intergenic 40.0%
! GGAGTTCAAGAAGTATACTG+AGG - chr5_1:4961649-4961668 Msa0713080:intron 40.0%
! ACAAACTCATAGCCTTGAGT+TGG - chr5_1:4961726-4961745 Msa0713080:intron 40.0%
! TGGTCTTGATTTGAGGCATA+AGG - chr5_1:4961754-4961773 Msa0713080:intron 40.0%
TAGTAGAAAGAGAGAGTGAG+TGG + chr5_1:4961871-4961890 None:intergenic 40.0%
AACTCGGGAGGAATAGAAAA+TGG - chr5_1:4961905-4961924 Msa0713080:intron 40.0%
GCCAAGCTTAATTGGAAAAC+AGG - chr5_1:4961947-4961966 Msa0713080:intron 40.0%
! GCCTGTTTTCCAATTAAGCT+TGG + chr5_1:4961951-4961970 None:intergenic 40.0%
TAATTGGAAAACAGGCCCTT+CGG - chr5_1:4961955-4961974 Msa0713080:intron 40.0%
GATACAAATCATCCGTCATG+CGG - chr5_1:4961983-4962002 Msa0713080:intron 40.0%
CTAACTTTCGGGATTGGATT+AGG + chr5_1:4962058-4962077 None:intergenic 40.0%
GGATTGTTGAAGCGGTATTT+CGG - chr5_1:4962090-4962109 Msa0713080:intron 40.0%
GTCATATCTCTAGTCGATGT+GGG - chr5_1:4962112-4962131 Msa0713080:intron 40.0%
TAGATGTCTACTTGTGGAAG+TGG + chr5_1:4962151-4962170 None:intergenic 40.0%
AGAGTATGAACCAATTCGGA+TGG - chr5_1:4962170-4962189 Msa0713080:intron 40.0%
TGTTATTAGGCCATCCGAAT+TGG + chr5_1:4962183-4962202 None:intergenic 40.0%
!! GCATGAAGGGTGTTGTTATT+AGG + chr5_1:4962196-4962215 None:intergenic 40.0%
CACAAAGGGTAAGATTGTAC+TGG + chr5_1:4962270-4962289 None:intergenic 40.0%
!! CCCCCTTCCTGATTTTATTT+AGG - chr5_1:4962318-4962337 Msa0713080:intron 40.0%
TAGTAGCTGAATTGCCATGT+AGG + chr5_1:4962365-4962384 None:intergenic 40.0%
! GACTAGGACAAATGATAGTG+CGG + chr5_1:4962494-4962513 None:intergenic 40.0%
GTGCAAGTGATTTAACTAGC+TGG - chr5_1:4962614-4962633 Msa0713080:intron 40.0%
TTAACTAGCTGGGAGATGAA+AGG - chr5_1:4962625-4962644 Msa0713080:intron 40.0%
TAACTAGCTGGGAGATGAAA+GGG - chr5_1:4962626-4962645 Msa0713080:intron 40.0%
TCGAGTATTAGACCCTTTCA+TGG - chr5_1:4962711-4962730 Msa0713080:intron 40.0%
CACATAGCAGTATGCTTTGA+TGG + chr5_1:4962768-4962787 None:intergenic 40.0%
TCTACTGTCCTATGAAGAAC+TGG - chr5_1:4962871-4962890 Msa0713080:intron 40.0%
TTACTCTGCCAGTTCTTCAT+AGG + chr5_1:4962882-4962901 None:intergenic 40.0%
! TATCAGGTTGTCCAAGATGA+AGG - chr5_1:4963189-4963208 Msa0713080:intron 40.0%
! ATCAGATGAAAGTATGAGCG+GGG + chr5_1:4963349-4963368 None:intergenic 40.0%
! CATCAGATGAAAGTATGAGC+GGG + chr5_1:4963350-4963369 None:intergenic 40.0%
GCTCATACTTTCATCTGATG+AGG - chr5_1:4963350-4963369 Msa0713080:intron 40.0%
! CTGCTGTAGTGTCAATTTTG+AGG - chr5_1:4963375-4963394 Msa0713080:intron 40.0%
TCACACCCAGAAAAAACAAC+TGG + chr5_1:4963432-4963451 None:intergenic 40.0%
ATACCAACAGGTATGTCATG+CGG - chr5_1:4963546-4963565 Msa0713080:intron 40.0%
! CACGGAAAAACAAGTGGTTT+TGG - chr5_1:4963668-4963687 Msa0713080:intron 40.0%
TTGCAGCTGCTATGATTGTT+TGG - chr5_1:4963721-4963740 Msa0713080:CDS 40.0%
GACGCTAATATTGAGCACAT+GGG + chr5_1:4963846-4963865 None:intergenic 40.0%
! CTAGATCTTTATTCTGGCTG+TGG - chr5_1:4964112-4964131 Msa0713080:intron 40.0%
AGCAAAGAAGCCAGAATTAG+TGG + chr5_1:4964276-4964295 None:intergenic 40.0%
GGACTTTCTGCAACTATTGA+AGG - chr5_1:4964468-4964487 Msa0713080:intron 40.0%
TTCTGCAACTATTGAAGGAG+TGG - chr5_1:4964473-4964492 Msa0713080:intron 40.0%
TCTGCAACTATTGAAGGAGT+GGG - chr5_1:4964474-4964493 Msa0713080:intron 40.0%
CCCAGTAAAACAGAGAAACA+TGG - chr5_1:4964655-4964674 Msa0713080:intron 40.0%
! TCTCTTTTACCGATAAAGGC+AGG + chr5_1:4964944-4964963 None:intergenic 40.0%
ACTGGATACTCAAAAGGGTT+GGG + chr5_1:4965177-4965196 None:intergenic 40.0%
GCAATGACTGGATACTCAAA+AGG + chr5_1:4965183-4965202 None:intergenic 40.0%
TGTTCATGCATCTCTTTCGT+AGG - chr5_1:4965593-4965612 Msa0713080:CDS 40.0%
TTGTACCTGCAGCAATTGTA+AGG - chr5_1:4965742-4965761 Msa0713080:intron 40.0%
CAATTGTAAGGAAAGCTTGC+AGG - chr5_1:4965754-4965773 Msa0713080:CDS 40.0%
!! GGTGAAGTTGATGTTGTTTG+TGG - chr5_1:4965909-4965928 Msa0713080:CDS 40.0%
!! GAAGTTGATGTTGTTTGTGG+AGG - chr5_1:4965912-4965931 Msa0713080:CDS 40.0%
AGATTTGACAAGGGTTCACT+CGG - chr5_1:4966089-4966108 Msa0713080:intron 40.0%
TCACTCGGAAGATATGCTTT+AGG - chr5_1:4966104-4966123 Msa0713080:intron 40.0%
! AAGATATGCTTTAGGTCGTC+TGG - chr5_1:4966112-4966131 Msa0713080:intron 40.0%
CATGCATTACCAAGCAAGAT+TGG - chr5_1:4966139-4966158 Msa0713080:intron 40.0%
CAACAATTCCCAATCTTGCT+TGG + chr5_1:4966151-4966170 None:intergenic 40.0%
! TTCGATTGCGTGTTTTCATG+TGG - chr5_1:4966198-4966217 Msa0713080:intron 40.0%
! TCGATTGCGTGTTTTCATGT+GGG - chr5_1:4966199-4966218 Msa0713080:intron 40.0%
TCAGTACCATACATCGTTGT+TGG - chr5_1:4966695-4966714 Msa0713080:CDS 40.0%
ACAAACTAGCATTCTCTTGG+AGG + chr5_1:4966900-4966919 None:intergenic 40.0%
TAAGGACACTAATCAGTGGT+TGG + chr5_1:4967187-4967206 None:intergenic 40.0%
CGAAAACTGGTGAGAGAAAA+GGG + chr5_1:4967216-4967235 None:intergenic 40.0%
ACGAAAACTGGTGAGAGAAA+AGG + chr5_1:4967217-4967236 None:intergenic 40.0%
GTGCATACATGAACGAAAAC+TGG + chr5_1:4967229-4967248 None:intergenic 40.0%
GTAATAGTTGACACCATGGT+TGG + chr5_1:4967271-4967290 None:intergenic 40.0%
! TAAGACTTGGCTTTCGAACT+TGG + chr5_1:4967320-4967339 None:intergenic 40.0%
AAGTTCGAAAGCCAAGTCTT+AGG - chr5_1:4967319-4967338 Msa0713080:intron 40.0%
AGTTCGAAAGCCAAGTCTTA+GGG - chr5_1:4967320-4967339 Msa0713080:intron 40.0%
GAAACTACTTCCCTAAGACT+TGG + chr5_1:4967333-4967352 None:intergenic 40.0%
TATGTTTGGGCTGAAGTTTG+CGG + chr5_1:4967847-4967866 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - chr5_1:4967932-4967951 Msa0713080:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - chr5_1:4967933-4967952 Msa0713080:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr5_1:4967964-4967983 Msa0713080:intron 40.0%
ATGATTGGACGCTACTCAAA+GGG + chr5_1:4968038-4968057 None:intergenic 40.0%
AATGATTGGACGCTACTCAA+AGG + chr5_1:4968039-4968058 None:intergenic 40.0%
! CGTCCAATCATTTTCTACCA+AGG - chr5_1:4968047-4968066 Msa0713080:intron 40.0%
TGCCCTTGGTAGAAAATGAT+TGG + chr5_1:4968053-4968072 None:intergenic 40.0%
TGTGATGGCAATGGAAATTG+GGG + chr5_1:4968302-4968321 None:intergenic 40.0%
CATGTGATGGCAATGGAAAT+TGG + chr5_1:4968304-4968323 None:intergenic 40.0%
!!! TCACCAGCTTTGGCTTTTTT+TGG - chr5_1:4968417-4968436 Msa0713080:intron 40.0%
!! GGTCACAAACTTTGAAACTC+GGG - chr5_1:4968744-4968763 Msa0713080:CDS 40.0%
!! GTTTCTGGAGGATTTTGGTA+TGG + chr5_1:4968778-4968797 None:intergenic 40.0%
CAAATTATGCACTCAAGGGA+AGG + chr5_1:4968845-4968864 None:intergenic 40.0%
TAGTATATGGGACACATCCT+CGG + chr5_1:4969024-4969043 None:intergenic 40.0%
!! TCATTTTGAGTAGAGGTGAC+TGG - chr5_1:4969165-4969184 Msa0713080:CDS 40.0%
GTGACTGGATCCACATTAAA+TGG - chr5_1:4969180-4969199 Msa0713080:CDS 40.0%
TGGGAATTTGACAAACACGT+AGG + chr5_1:4969269-4969288 None:intergenic 40.0%
TTGTCAAATTCCCAAACGGA+AGG - chr5_1:4969275-4969294 Msa0713080:CDS 40.0%
CAGAATACAACCTTCCGTTT+GGG + chr5_1:4969288-4969307 None:intergenic 40.0%
CAACAATTCCAGGAAGATCA+CGG + chr5_1:4969392-4969411 None:intergenic 40.0%
GATCTTCCTGGAATTGTTGT+AGG - chr5_1:4969393-4969412 Msa0713080:intron 40.0%
TCAGATCCTACAACAATTCC+AGG + chr5_1:4969402-4969421 None:intergenic 40.0%
TGTTGTAGGATCTGACAATG+TGG - chr5_1:4969407-4969426 Msa0713080:intron 40.0%
TAGGATCTGACAATGTGGTT+AGG - chr5_1:4969412-4969431 Msa0713080:intron 40.0%
! GGAATTTTCTCTGTTGGATG+TGG + chr5_1:4969438-4969457 None:intergenic 40.0%
TTTACCAATCGCTTTCCAGA+TGG + chr5_1:4969468-4969487 None:intergenic 40.0%
CACCACAAAAGCAACCTATA+AGG - chr5_1:4969559-4969578 Msa0713080:intron 40.0%
AAGTAGTCCTTATAAGGCTG+GGG + chr5_1:4969593-4969612 None:intergenic 40.0%
CAAAGTAGTCCTTATAAGGC+TGG + chr5_1:4969595-4969614 None:intergenic 40.0%
TCCATATCTCTAATCGACGT+GGG - chr5_1:4969615-4969634 Msa0713080:intron 40.0%
TCTAGCACTACAATAAAGGC+TGG + chr5_1:4969648-4969667 None:intergenic 40.0%
!! ATGTCTAGTCTTGGATGTGA+GGG + chr5_1:4969795-4969814 None:intergenic 40.0%
AGGTGGAATAACAGAGAACT+TGG - chr5_1:4969834-4969853 Msa0713080:intron 40.0%
GACCTGAGACCAAATAAAGT+AGG + chr5_1:4970041-4970060 None:intergenic 40.0%
ACTGCTTCACTTATGAACAG+GGG - chr5_1:4970068-4970087 Msa0713080:intron 40.0%
GCACATTTATGTAGGCCATT+TGG - chr5_1:4970175-4970194 Msa0713080:intron 40.0%
TTTGTGGGTCTGTGAAAGAA+AGG - chr5_1:4970414-4970433 Msa0713080:intron 40.0%
! TGTAACTGGTGGACAACAAA+AGG + chr5_1:4970570-4970589 None:intergenic 40.0%
! ATTTGCAGGTACCGTCAAAT+TGG - chr5_1:4970765-4970784 Msa0713080:intron 40.0%
GCTTTCTATGTGCAATTCCT+AGG + chr5_1:4970833-4970852 None:intergenic 40.0%
GGAATTGCACATAGAAAGCT+TGG - chr5_1:4970834-4970853 Msa0713080:intron 40.0%
GTTCTTGAGCCAAAAGATGT+TGG - chr5_1:4970978-4970997 Msa0713080:intron 40.0%
!!! ATCTTTTGGCTCAAGAATGG+CGG + chr5_1:4971075-4971094 None:intergenic 40.0%
!! AACATCTGTCGACTCAAGAA+TGG + chr5_1:4971177-4971196 None:intergenic 40.0%
ATCTTTCGACTCAAAAAGGG+TGG + chr5_1:4971273-4971292 None:intergenic 40.0%
!! AACATCTGTCGACTCAAGAA+TGG + chr5_1:4971177-4971196 None:intergenic 40.0%
GCTCCTTCCGATGTAATTGA+CGG - chr5_1:4958716-4958735 Msa0713080:CDS 45.0%
TTGCCGTCAATTACATCGGA+AGG + chr5_1:4958722-4958741 None:intergenic 45.0%
GTGCGTTCTAACGGAAAATC+TGG - chr5_1:4958743-4958762 Msa0713080:CDS 45.0%
GGCACAAAATGGAGTTGTAG+AGG + chr5_1:4959898-4959917 None:intergenic 45.0%
TTAGAGGAGCTGGCACAAAA+TGG + chr5_1:4959909-4959928 None:intergenic 45.0%
!! GTTGGTTCTAAAGAGCTCAG+CGG - chr5_1:4960126-4960145 Msa0713080:intron 45.0%
TGTTGAGAAATGGGGACATG+CGG - chr5_1:4960170-4960189 Msa0713080:intron 45.0%
GCAGCTAGTAAAAGGTTGCA+AGG + chr5_1:4960227-4960246 None:intergenic 45.0%
TCAGGAGAATGTTGTTCCAC+TGG + chr5_1:4960672-4960691 None:intergenic 45.0%
! TCCCCAACCTGGTTTGAAAA+TGG - chr5_1:4960738-4960757 Msa0713080:CDS 45.0%
!! GCCATTTTCAAACCAGGTTG+GGG + chr5_1:4960742-4960761 None:intergenic 45.0%
!! CGCCATTTTCAAACCAGGTT+GGG + chr5_1:4960743-4960762 None:intergenic 45.0%
! CCAACCTGGTTTGAAAATGG+CGG - chr5_1:4960741-4960760 Msa0713080:intron 45.0%
!! TGTTCCGCCATTTTCAAACC+AGG + chr5_1:4960748-4960767 None:intergenic 45.0%
! CTTGCCTTTTAACACAGACG+AGG + chr5_1:4960787-4960806 None:intergenic 45.0%
!! GGCCAACTTGTTATGGGAAA+TGG + chr5_1:4961032-4961051 None:intergenic 45.0%
GCAGTTCCCAATGATAGCTT+GGG + chr5_1:4961363-4961382 None:intergenic 45.0%
TGCAGTTCCCAATGATAGCT+TGG + chr5_1:4961364-4961383 None:intergenic 45.0%
! GGGAACTGCATTTTCACTGT+TGG - chr5_1:4961374-4961393 Msa0713080:intron 45.0%
TTTCACGGTCTTTCAGTGGA+TGG + chr5_1:4961530-4961549 None:intergenic 45.0%
! AGGGATTTTCTTCCCCGAAA+TGG - chr5_1:4961616-4961635 Msa0713080:CDS 45.0%
!!! CCCCGAAATGGACTATTTTC+TGG - chr5_1:4961628-4961647 Msa0713080:intron 45.0%
! GGCTATGAGTTTGTTCTGCT+GGG + chr5_1:4961720-4961739 None:intergenic 45.0%
! AGGCTATGAGTTTGTTCTGC+TGG + chr5_1:4961721-4961740 None:intergenic 45.0%
!! ATAGCCTTGAGTTGGCTTTC+TGG - chr5_1:4961734-4961753 Msa0713080:intron 45.0%
AAGACCAGAAAGCCAACTCA+AGG + chr5_1:4961741-4961760 None:intergenic 45.0%
!! GGCTTTCTGGTCTTGATTTG+AGG - chr5_1:4961747-4961766 Msa0713080:intron 45.0%
GAGAGAGTGAGTGGAAAGAA+AGG + chr5_1:4961862-4961881 None:intergenic 45.0%
ACTTTCGATAGTAACTCGGG+AGG - chr5_1:4961893-4961912 Msa0713080:intron 45.0%
AATATGTGCAAGCCGCATGA+CGG + chr5_1:4961998-4962017 None:intergenic 45.0%
CTTGAGCTAACTTTCGGGAT+TGG + chr5_1:4962064-4962083 None:intergenic 45.0%
GGTCATATCTCTAGTCGATG+TGG - chr5_1:4962111-4962130 Msa0713080:intron 45.0%
TCGCGGGATCATAACACAAA+GGG + chr5_1:4962284-4962303 None:intergenic 45.0%
ATCGCGGGATCATAACACAA+AGG + chr5_1:4962285-4962304 None:intergenic 45.0%
! GCAATAGTGGAATGAGAAGC+AGG + chr5_1:4962438-4962457 None:intergenic 45.0%
TACCAACAGGTATGTCATGC+GGG - chr5_1:4963547-4963566 Msa0713080:intron 45.0%
GATAGGGAAAAGGAAATGGG+AGG - chr5_1:4963631-4963650 Msa0713080:intron 45.0%
CGTTGACACGGAAAAACAAG+TGG - chr5_1:4963662-4963681 Msa0713080:intron 45.0%
GGACGCTAATATTGAGCACA+TGG + chr5_1:4963847-4963866 None:intergenic 45.0%
TCTTGAGAGTCACTCAACAG+AGG - chr5_1:4964030-4964049 Msa0713080:intron 45.0%
GTTCTGTGCAACTCAGGATT+AGG + chr5_1:4964079-4964098 None:intergenic 45.0%
AGTTCTGTTCTGTGCAACTC+AGG + chr5_1:4964085-4964104 None:intergenic 45.0%
! GATCTTTATTCTGGCTGTGG+TGG - chr5_1:4964115-4964134 Msa0713080:CDS 45.0%
ATGTCAACTGGACTGTGCTT+AGG - chr5_1:4964139-4964158 Msa0713080:CDS 45.0%
TGGCTTCTTTGCTCAGAGAT+GGG - chr5_1:4964283-4964302 Msa0713080:CDS 45.0%
CACTTACATGTGTCTCTGGA+TGG + chr5_1:4964352-4964371 None:intergenic 45.0%
TCAGCACTTACATGTGTCTC+TGG + chr5_1:4964356-4964375 None:intergenic 45.0%
GGTGAGAAATGAATCTGCAG+AGG - chr5_1:4964447-4964466 Msa0713080:intron 45.0%
AGTGGGAGAAGCTATGCAAA+CGG - chr5_1:4964491-4964510 Msa0713080:intron 45.0%
!! ATTGTTTGGTGGTGAGCACT+AGG - chr5_1:4965120-4965139 Msa0713080:intron 45.0%
GACTGGATACTCAAAAGGGT+TGG + chr5_1:4965178-4965197 None:intergenic 45.0%
CATCTCTTTCGTAGGTACAC+TGG - chr5_1:4965601-4965620 Msa0713080:CDS 45.0%
TCTTTCGTAGGTACACTGGA+AGG - chr5_1:4965605-4965624 Msa0713080:CDS 45.0%
CTTTCGTAGGTACACTGGAA+GGG - chr5_1:4965606-4965625 Msa0713080:CDS 45.0%
GCTTTCCTTACAATTGCTGC+AGG + chr5_1:4965750-4965769 None:intergenic 45.0%
TTGCAGGAGTTTGTGAGAGA+GGG - chr5_1:4965770-4965789 Msa0713080:CDS 45.0%
CCACTAATTCCTTGACAAGG+AGG + chr5_1:4965939-4965958 None:intergenic 45.0%
CCTCCTTGTCAAGGAATTAG+TGG - chr5_1:4965936-4965955 Msa0713080:intron 45.0%
AGATTGGGAATTGTTGCAGC+TGG - chr5_1:4966155-4966174 Msa0713080:intron 45.0%
ATTGTTGCAGCTGGCTGTTA+TGG - chr5_1:4966164-4966183 Msa0713080:intron 45.0%
! CGATTGCGTGTTTTCATGTG+GGG - chr5_1:4966200-4966219 Msa0713080:intron 45.0%
! GATTGCGTGTTTTCATGTGG+GGG - chr5_1:4966201-4966220 Msa0713080:intron 45.0%
! ATTGCGTGTTTTCATGTGGG+GGG - chr5_1:4966202-4966221 Msa0713080:intron 45.0%
GCTGCTGTTGAATGCATTGA+TGG + chr5_1:4966368-4966387 None:intergenic 45.0%
! TTTTTCCAGTTGCTGAGGTG+AGG - chr5_1:4966487-4966506 Msa0713080:intron 45.0%
!! GAATGTTGGCTTGGTTGAGT+GGG + chr5_1:4966650-4966669 None:intergenic 45.0%
!! AGAATGTTGGCTTGGTTGAG+TGG + chr5_1:4966651-4966670 None:intergenic 45.0%
GGTTGACCAACAACGATGTA+TGG + chr5_1:4966704-4966723 None:intergenic 45.0%
AGAGTTGTGGGTGTAAACCT+TGG + chr5_1:4966969-4966988 None:intergenic 45.0%
GGGATAAGGACACTAATCAG+TGG + chr5_1:4967191-4967210 None:intergenic 45.0%
ATAAATCCTCCTCCCAACCA+TGG - chr5_1:4967255-4967274 Msa0713080:intron 45.0%
ATGTTTGGGCTGAAGTTTGC+GGG + chr5_1:4967846-4967865 None:intergenic 45.0%
! TACACAAGAGGCTGTTTCCA+GGG + chr5_1:4967927-4967946 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr5_1:4967928-4967947 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr5_1:4967960-4967979 Msa0713080:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr5_1:4967963-4967982 Msa0713080:intron 45.0%
CTGCCAAAAAAAGCCAAAGC+TGG + chr5_1:4968423-4968442 None:intergenic 45.0%
GGAACAACAACGAGAAGTAG+AGG - chr5_1:4968466-4968485 Msa0713080:intron 45.0%
AAGAAAAAGCAGGTCGGTAC+AGG + chr5_1:4968530-4968549 None:intergenic 45.0%
GTTACCTATGTTGCGACAAG+TGG - chr5_1:4968922-4968941 Msa0713080:intron 45.0%
ACAACCACTTGTCGCAACAT+AGG + chr5_1:4968929-4968948 None:intergenic 45.0%
CCAGAATACAACCTTCCGTT+TGG + chr5_1:4969289-4969308 None:intergenic 45.0%
CCAAACGGAAGGTTGTATTC+TGG - chr5_1:4969286-4969305 Msa0713080:CDS 45.0%
GCAAATTTCCGTGATCTTCC+TGG - chr5_1:4969381-4969400 Msa0713080:CDS 45.0%
GTCCATATCTCTAATCGACG+TGG - chr5_1:4969614-4969633 Msa0713080:intron 45.0%
! TCCCACGTCGATTAGAGATA+TGG + chr5_1:4969619-4969638 None:intergenic 45.0%
!! TGTCTAGTCTTGGATGTGAG+GGG + chr5_1:4969794-4969813 None:intergenic 45.0%
!! GATGTCTAGTCTTGGATGTG+AGG + chr5_1:4969796-4969815 None:intergenic 45.0%
ACACTCTGGATGTCTAGTCT+TGG + chr5_1:4969804-4969823 None:intergenic 45.0%
AAGACTAGACATCCAGAGTG+TGG - chr5_1:4969803-4969822 Msa0713080:intron 45.0%
! TCCAGAGTGTGGACTAATAC+AGG - chr5_1:4969814-4969833 Msa0713080:intron 45.0%
ACCTGTATTAGTCCACACTC+TGG + chr5_1:4969818-4969837 None:intergenic 45.0%
! AGAGTGTGGACTAATACAGG+TGG - chr5_1:4969817-4969836 Msa0713080:intron 45.0%
! ACGATTGTGGTGGGATGAAA+CGG - chr5_1:4970198-4970217 Msa0713080:intron 45.0%
GGACCTGGTTATGACAACTT+GGG + chr5_1:4970243-4970262 None:intergenic 45.0%
AGGACCTGGTTATGACAACT+TGG + chr5_1:4970244-4970263 None:intergenic 45.0%
GGTAGTAATACATCCAGAGC+AGG - chr5_1:4970331-4970350 Msa0713080:intron 45.0%
TGGCAAATTCTCGTATGGTG+AGG + chr5_1:4970364-4970383 None:intergenic 45.0%
TCACCATACGAGAATTTGCC+AGG - chr5_1:4970363-4970382 Msa0713080:intron 45.0%
ATCATGAAATCCTTGCAGCC+TGG + chr5_1:4970384-4970403 None:intergenic 45.0%
TATCCTAAAGCTCGCGAAAC+AGG + chr5_1:4970807-4970826 None:intergenic 45.0%
TGGAAAGAGAGAACTTGGGT+GGG + chr5_1:4970884-4970903 None:intergenic 45.0%
TTGGAAAGAGAGAACTTGGG+TGG + chr5_1:4970885-4970904 None:intergenic 45.0%
!!! CACGACCTTTTTTGAGTCGA+AGG - chr5_1:4970938-4970957 Msa0713080:intron 45.0%
CTTGAGTCGACAGATGTTTG+TGG - chr5_1:4971179-4971198 Msa0713080:CDS 45.0%
!!! TTTTTACATAAATTATTTTT+CGG - chr5_1:4959273-4959292 Msa0713080:intron 5.0%
!!! ATTTTATTTGATTTTATTTT+TGG - chr5_1:4959296-4959315 Msa0713080:intron 5.0%
!! TAATTAAATACAAAAAAAAA+CGG + chr5_1:4959399-4959418 None:intergenic 5.0%
!! AATGTTATATTATTATTATT+AGG + chr5_1:4959658-4959677 None:intergenic 5.0%
!! ATTAAACTATAATTTATTAA+TGG - chr5_1:4959934-4959953 Msa0713080:intron 5.0%
!! TTATAAAATTATTTAATTAG+AGG - chr5_1:4964868-4964887 Msa0713080:intron 5.0%
!! TAAAATTTATAAAAACAAAA+TGG + chr5_1:4965406-4965425 None:intergenic 5.0%
!! ATTATTTAATGAATATAAAT+AGG - chr5_1:4970446-4970465 Msa0713080:intron 5.0%
!! GCGGCGGAGAAGTTGATAAT+TGG + chr5_1:4958611-4958630 None:intergenic 50.0%
TGCTCTGCTTGAAACACCTC+CGG + chr5_1:4958659-4958678 None:intergenic 50.0%
GACGGCAATGTGCGTTCTAA+CGG - chr5_1:4958734-4958753 Msa0713080:CDS 50.0%
AAACTGCTCAGCACTGTCTC+TGG - chr5_1:4960704-4960723 Msa0713080:CDS 50.0%
ACGAAATCACATCCCCAACC+TGG - chr5_1:4960727-4960746 Msa0713080:CDS 50.0%
!! CCGCCATTTTCAAACCAGGT+TGG + chr5_1:4960744-4960763 None:intergenic 50.0%
GGGATGGCGTTACGAATTGA+AGG - chr5_1:4960923-4960942 Msa0713080:intron 50.0%
GCATAAGGTTGTTCGGTCTC+AGG - chr5_1:4961769-4961788 Msa0713080:intron 50.0%
GGGTCAAGATCGTAAATCGC+GGG + chr5_1:4962300-4962319 None:intergenic 50.0%
GGGGTCAAGATCGTAAATCG+CGG + chr5_1:4962301-4962320 None:intergenic 50.0%
GCTGAATTGCCATGTAGGCA+AGG + chr5_1:4962360-4962379 None:intergenic 50.0%
GTTAATAGCGGTACTGCAGC+AGG + chr5_1:4962460-4962479 None:intergenic 50.0%
TTCTGGGTGTGACTTCTTGC+AGG - chr5_1:4963440-4963459 Msa0713080:intron 50.0%
!! CTTGCAGGTTGGTCAGAAGT+TGG - chr5_1:4963455-4963474 Msa0713080:intron 50.0%
AGGGAAAAGGAAATGGGAGG+TGG - chr5_1:4963634-4963653 Msa0713080:intron 50.0%
GAGTGACTCTCAAGAACAGC+AGG + chr5_1:4964025-4964044 None:intergenic 50.0%
CTCAGGATTAGGCAGACTCT+TGG + chr5_1:4964068-4964087 None:intergenic 50.0%
CTGGCTTCTTTGCTCAGAGA+TGG - chr5_1:4964282-4964301 Msa0713080:CDS 50.0%
CCTGAGTTCCTTGACCGTAA+TGG + chr5_1:4964547-4964566 None:intergenic 50.0%
CCATTACGGTCAAGGAACTC+AGG - chr5_1:4964544-4964563 Msa0713080:intron 50.0%
TTACGGTCAAGGAACTCAGG+AGG - chr5_1:4964547-4964566 Msa0713080:intron 50.0%
TACACCAGCCCCCACTTTAA+TGG - chr5_1:4965507-4965526 Msa0713080:intron 50.0%
CTTGCAGGAGTTTGTGAGAG+AGG - chr5_1:4965769-4965788 Msa0713080:CDS 50.0%
ATGTACCTCACCTCAGCAAC+TGG + chr5_1:4966495-4966514 None:intergenic 50.0%
GAGAGAAAAGGGCAGGGATA+AGG + chr5_1:4967205-4967224 None:intergenic 50.0%
ACTGGTGAGAGAAAAGGGCA+GGG + chr5_1:4967211-4967230 None:intergenic 50.0%
AACTGGTGAGAGAAAAGGGC+AGG + chr5_1:4967212-4967231 None:intergenic 50.0%
TAGTTGACACCATGGTTGGG+AGG + chr5_1:4967267-4967286 None:intergenic 50.0%
CGTCAACTGCATCAATGCCT+AGG + chr5_1:4967409-4967428 None:intergenic 50.0%
ATTGAGTAGCGTCCAATCCC+TGG - chr5_1:4967907-4967926 Msa0713080:intron 50.0%
! AAGAGGCTGTTTCCAGGGAT+TGG + chr5_1:4967922-4967941 None:intergenic 50.0%
AATACCTCAAACTCAGGCGG+AGG + chr5_1:4968347-4968366 None:intergenic 50.0%
ACAGGTGCCAGAAAATCAGC+TGG + chr5_1:4969000-4969019 None:intergenic 50.0%
CGCTTTCCAGATGGTAGCAA+TGG + chr5_1:4969459-4969478 None:intergenic 50.0%
GCTACCATCTGGAAAGCGAT+TGG - chr5_1:4969461-4969480 Msa0713080:intron 50.0%
! CTGGGGTGTCCTTACCTTAT+AGG + chr5_1:4969576-4969595 None:intergenic 50.0%
! AAGGACACCCCAGCCTTATA+AGG - chr5_1:4969583-4969602 Msa0713080:intron 50.0%
TGCAGCCAATCTGTGAAGGA+TGG - chr5_1:4969683-4969702 Msa0713080:intron 50.0%
CACTGCCATCCTTCACAGAT+TGG + chr5_1:4969691-4969710 None:intergenic 50.0%
TGTGAAGGATGGCAGTGTCA+TGG - chr5_1:4969694-4969713 Msa0713080:intron 50.0%
!! TCTAGTCTTGGATGTGAGGG+GGG + chr5_1:4969792-4969811 None:intergenic 50.0%
!! GTCTAGTCTTGGATGTGAGG+GGG + chr5_1:4969793-4969812 None:intergenic 50.0%
GCTTCACTTATGAACAGGGG+AGG - chr5_1:4970071-4970090 Msa0713080:intron 50.0%
GTAGGCCATTTGGACGATTG+TGG - chr5_1:4970185-4970204 Msa0713080:intron 50.0%
GCCATTTGGACGATTGTGGT+GGG - chr5_1:4970189-4970208 Msa0713080:intron 50.0%
TCCCACCACAATCGTCCAAA+TGG + chr5_1:4970193-4970212 None:intergenic 50.0%
!! ACAACTTGGGCTGGTTAGTG+CGG + chr5_1:4970230-4970249 None:intergenic 50.0%
CTGGTTATGACAACTTGGGC+TGG + chr5_1:4970239-4970258 None:intergenic 50.0%
CAGCCCAAGTTGTCATAACC+AGG - chr5_1:4970237-4970256 Msa0713080:intron 50.0%
AACGAATTGAAGACCGCGAC+AGG + chr5_1:4970264-4970283 None:intergenic 50.0%
CAGCCTGGCAAATTCTCGTA+TGG + chr5_1:4970369-4970388 None:intergenic 50.0%
GTACCTGTTTCGCGAGCTTT+AGG - chr5_1:4970801-4970820 Msa0713080:intron 50.0%
!! CGAGCTTTAGGATATGCCCT+AGG - chr5_1:4970813-4970832 Msa0713080:intron 50.0%
AAGAGAGAACTTGGGTGGGA+GGG + chr5_1:4970880-4970899 None:intergenic 50.0%
AAAGAGAGAACTTGGGTGGG+AGG + chr5_1:4970881-4970900 None:intergenic 50.0%
!!! GTGGTGTCGCCAACATCTTT+TGG + chr5_1:4970990-4971009 None:intergenic 50.0%
!!! GTGGTGTCGCCAACATCTTT+TGG + chr5_1:4970990-4971009 None:intergenic 50.0%
CGATTCCTCCGTCATTGCGA+CGG + chr5_1:4958633-4958652 None:intergenic 55.0%
TCTGCTTGAAACACCTCCGG+CGG + chr5_1:4958656-4958675 None:intergenic 55.0%
TTTCACCACCGGAGATCGCT+GGG + chr5_1:4958693-4958712 None:intergenic 55.0%
ATTTCACCACCGGAGATCGC+TGG + chr5_1:4958694-4958713 None:intergenic 55.0%
GCGATCTCCGGTGGTGAAAT+CGG - chr5_1:4958694-4958713 Msa0713080:CDS 55.0%
! GAAGGAGCCGATTTCACCAC+CGG + chr5_1:4958704-4958723 None:intergenic 55.0%
TGTCCGAGGAGAATCGACGA+CGG - chr5_1:4958798-4958817 Msa0713080:CDS 55.0%
TCAGGTGCATCTGACGGAAG+AGG - chr5_1:4958833-4958852 Msa0713080:CDS 55.0%
GGTACTGCAGCAGGCAATAG+TGG + chr5_1:4962451-4962470 None:intergenic 55.0%
GGGTGTGACTTCTTGCAGGT+TGG - chr5_1:4963444-4963463 Msa0713080:intron 55.0%
CTCCCGCATGACATACCTGT+TGG + chr5_1:4963552-4963571 None:intergenic 55.0%
! GCGGGAGTCCAAGATGCTTT+TGG - chr5_1:4963565-4963584 Msa0713080:intron 55.0%
! GAGGTGGAAGTGCGTTGACA+CGG - chr5_1:4963650-4963669 Msa0713080:intron 55.0%
TTCGCCATTAAAGTGGGGGC+TGG + chr5_1:4965514-4965533 None:intergenic 55.0%
TGTGGAGGTCCTCCTTGTCA+AGG - chr5_1:4965927-4965946 Msa0713080:intron 55.0%
TTGACACCATGGTTGGGAGG+AGG + chr5_1:4967264-4967283 None:intergenic 55.0%
ACGCTACTCAAAGGGCAACC+CGG + chr5_1:4968030-4968049 None:intergenic 55.0%
!! ATTTTCTGGCACCTGTGCCG+AGG - chr5_1:4969004-4969023 Msa0713080:CDS 55.0%
! CACAGATTGGCTGCAGCAGT+TGG + chr5_1:4969678-4969697 None:intergenic 55.0%
CTGCTGCAGCCAATCTGTGA+AGG - chr5_1:4969679-4969698 Msa0713080:intron 55.0%
GAAGGATGGCAGTGTCATGG+CGG - chr5_1:4969697-4969716 Msa0713080:intron 55.0%
!! CTAGTCTTGGATGTGAGGGG+GGG + chr5_1:4969791-4969810 None:intergenic 55.0%
ATGAACAGGGGAGGTCCAAG+AGG - chr5_1:4970080-4970099 Msa0713080:intron 55.0%
GGCCATTTGGACGATTGTGG+TGG - chr5_1:4970188-4970207 Msa0713080:intron 55.0%
GTCATAACCAGGTCCTGTCG+CGG - chr5_1:4970248-4970267 Msa0713080:intron 55.0%
GTGAGGATTCGATCCTGCTC+TGG + chr5_1:4970347-4970366 None:intergenic 55.0%
CGAGAATTTGCCAGGCTGCA+AGG - chr5_1:4970371-4970390 Msa0713080:intron 55.0%
TTCCTCCGTCATTGCGACGG+CGG + chr5_1:4958630-4958649 None:intergenic 60.0%
! AATGACGGAGGAATCGCCGC+CGG - chr5_1:4958637-4958656 Msa0713080:CDS 60.0%
AGACGAGTCCCAGCGATCTC+CGG - chr5_1:4958682-4958701 Msa0713080:CDS 60.0%
!! CGACCGTCGTCGATTCTCCT+CGG + chr5_1:4958804-4958823 None:intergenic 60.0%
CGACGGTCGCCGAGATTATC+AGG - chr5_1:4958815-4958834 Msa0713080:CDS 60.0%
GGCTGTGGTGGCATGTCAAC+TGG - chr5_1:4964127-4964146 Msa0713080:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr5_1:4967976-4967995 Msa0713080:intron 60.0%
CTGAAGCTCCCGCATACGCA+GGG + chr5_1:4968003-4968022 None:intergenic 60.0%
ACTGAAGCTCCCGCATACGC+AGG + chr5_1:4968004-4968023 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG - chr5_1:4968008-4968027 Msa0713080:intron 60.0%
ATGGGACACATCCTCGGCAC+AGG + chr5_1:4969018-4969037 None:intergenic 60.0%
!! CTTGGGCTGGTTAGTGCGGT+AGG + chr5_1:4970226-4970245 None:intergenic 60.0%
TTGAAGACCGCGACAGGACC+TGG + chr5_1:4970258-4970277 None:intergenic 60.0%
GTGGGGGGCTCATCCTGATG+AGG - chr5_1:4966217-4966236 Msa0713080:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr5_1:4967978-4967997 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr5_1:4967991-4968010 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG + chr5_1:4967992-4968011 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG - chr5_1:4967991-4968010 Msa0713080:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG - chr5_1:4967992-4968011 Msa0713080:intron 65.0%
TGCGGGAGCTTCAGTGCACC+GGG - chr5_1:4968009-4968028 Msa0713080:intron 65.0%
CTGGCCTCCGCCTGAGTTTG+AGG - chr5_1:4968340-4968359 Msa0713080:intron 65.0%
CTCCGCCGCCGTCGCAATGA+CGG - chr5_1:4958622-4958641 Msa0713080:CDS 70.0%
CTCCGTCATTGCGACGGCGG+CGG + chr5_1:4958627-4958646 None:intergenic 70.0%
CGAGTCCCAGCGATCTCCGG+TGG - chr5_1:4958685-4958704 Msa0713080:CDS 70.0%
CGCATACGCAGGGTCCGGGA+AGG + chr5_1:4967993-4968012 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG + chr5_1:4967997-4968016 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG + chr5_1:4967998-4968017 None:intergenic 70.0%
CGCCGCCGTCGCAATGACGG+AGG - chr5_1:4958625-4958644 Msa0713080:CDS 75.0%
GACGGAGGAATCGCCGCCGG+AGG - chr5_1:4958640-4958659 Msa0713080:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 4958527 4971408 4958527 ID=Msa0713080;Name=Msa0713080
chr5_1 mRNA 4958527 4971408 4958527 ID=Msa0713080-mRNA-1;Parent=Msa0713080;Name=Msa0713080-mRNA-1;_AED=0.13;_eAED=0.13;_QI=111|0.90|0.86|1|0.90|0.86|23|26|1098
chr5_1 exon 4958527 4959162 4958527 ID=Msa0713080-mRNA-1:exon:2104;Parent=Msa0713080-mRNA-1
chr5_1 exon 4959500 4959603 4959500 ID=Msa0713080-mRNA-1:exon:2103;Parent=Msa0713080-mRNA-1
chr5_1 exon 4959677 4959746 4959677 ID=Msa0713080-mRNA-1:exon:2102;Parent=Msa0713080-mRNA-1
chr5_1 exon 4959834 4959877 4959834 ID=Msa0713080-mRNA-1:exon:2101;Parent=Msa0713080-mRNA-1
chr5_1 exon 4960507 4960557 4960507 ID=Msa0713080-mRNA-1:exon:2100;Parent=Msa0713080-mRNA-1
chr5_1 exon 4960639 4960757 4960639 ID=Msa0713080-mRNA-1:exon:2099;Parent=Msa0713080-mRNA-1
chr5_1 exon 4961103 4961190 4961103 ID=Msa0713080-mRNA-1:exon:2098;Parent=Msa0713080-mRNA-1
chr5_1 exon 4961406 4961492 4961406 ID=Msa0713080-mRNA-1:exon:2097;Parent=Msa0713080-mRNA-1
chr5_1 exon 4961574 4961642 4961574 ID=Msa0713080-mRNA-1:exon:2096;Parent=Msa0713080-mRNA-1
chr5_1 exon 4963697 4963809 4963697 ID=Msa0713080-mRNA-1:exon:2095;Parent=Msa0713080-mRNA-1
chr5_1 exon 4963834 4964026 4963834 ID=Msa0713080-mRNA-1:exon:2094;Parent=Msa0713080-mRNA-1
chr5_1 exon 4964115 4964181 4964115 ID=Msa0713080-mRNA-1:exon:2093;Parent=Msa0713080-mRNA-1
chr5_1 exon 4964262 4964320 4964262 ID=Msa0713080-mRNA-1:exon:2092;Parent=Msa0713080-mRNA-1
chr5_1 exon 4965245 4965487 4965245 ID=Msa0713080-mRNA-1:exon:2091;Parent=Msa0713080-mRNA-1
chr5_1 exon 4965571 4965636 4965571 ID=Msa0713080-mRNA-1:exon:2090;Parent=Msa0713080-mRNA-1
chr5_1 exon 4965743 4965945 4965743 ID=Msa0713080-mRNA-1:exon:2089;Parent=Msa0713080-mRNA-1
chr5_1 exon 4966380 4966473 4966380 ID=Msa0713080-mRNA-1:exon:2088;Parent=Msa0713080-mRNA-1
chr5_1 exon 4966621 4966740 4966621 ID=Msa0713080-mRNA-1:exon:2087;Parent=Msa0713080-mRNA-1
chr5_1 exon 4966832 4966936 4966832 ID=Msa0713080-mRNA-1:exon:2086;Parent=Msa0713080-mRNA-1
chr5_1 exon 4968520 4968622 4968520 ID=Msa0713080-mRNA-1:exon:2085;Parent=Msa0713080-mRNA-1
chr5_1 exon 4968739 4968773 4968739 ID=Msa0713080-mRNA-1:exon:2084;Parent=Msa0713080-mRNA-1
chr5_1 exon 4968991 4969404 4968991 ID=Msa0713080-mRNA-1:exon:2083;Parent=Msa0713080-mRNA-1
chr5_1 exon 4971058 4971408 4971058 ID=Msa0713080-mRNA-1:exon:2082;Parent=Msa0713080-mRNA-1
chr5_1 five_prime_UTR 4971298 4971408 4971298 ID=Msa0713080-mRNA-1:five_prime_utr;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4971058 4971297 4971058 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4968991 4969404 4968991 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4968739 4968773 4968739 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4968520 4968622 4968520 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4966832 4966936 4966832 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4966621 4966740 4966621 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4966380 4966473 4966380 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4965743 4965945 4965743 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4965571 4965636 4965571 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4965245 4965487 4965245 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4964262 4964320 4964262 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4964115 4964181 4964115 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4963834 4964026 4963834 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4963697 4963809 4963697 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4961574 4961642 4961574 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4961406 4961492 4961406 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4961103 4961190 4961103 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4960639 4960757 4960639 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4960507 4960557 4960507 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4959834 4959877 4959834 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4959677 4959746 4959677 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4959500 4959603 4959500 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 CDS 4958553 4959162 4958553 ID=Msa0713080-mRNA-1:cds;Parent=Msa0713080-mRNA-1
chr5_1 three_prime_UTR 4958527 4958552 4958527 ID=Msa0713080-mRNA-1:three_prime_utr;Parent=Msa0713080-mRNA-1
Gene Sequence

>Msa0713080

ATGACGGAGGAATCGCCGCCGGAGGTGTTTCAAGCAGAGCATGCAGACGAGTCCCAGCGATCTCCGGTGGTGAAATCGGCTCCTTCCGATGTAATTGACGGCAATGTGCGTTCTAACGGAAAATCTGGAAGGAAGAAAGGTAGGGTTTCTGAGATGAAATTGTCCGAGGAGAATCGACGACGGTCGCCGAGATTATCAGGTGCATCTGACGGAAGAGGCTCTTCTTCTTGTTCTGTTAAGCTGCGAAGAACTCGATCTTCAAATGGGATTGAAAACACGCAATTAGTTTTTTCTCAAGGAAAAAGAACCCCAAAGGTAGTTCACGAAAAGAACAAAAAAAGAAAAGTGAATTCCATTTCCATTGAATTGTCTAATTCACCAGTGGAACAACATTCTCCTGAAGTTGACGATATAAACTGCTCAGCACTGTCTCTGGACGAAATCACATCCCCAACCTGGTTTGAAAATGGCGGAACAAATTCTGATTATTTTGCCTCGTCTGTGTTAAAAGGCAAGCCACCAAAAAAGAAGTTTAAATCATCTGCTTCATCAACGAAAGGATGTATGTATGGGAGAAACATTCCGTCATTCATTGGTGATCCAATACCTGATGATGAAGCTCATAAAAAATGGGGATGGCGTTACGAATTGAAGGACAAACAATGTAATGATAAGGTGTTCATAATAAATGAGGATGAAGAAGACGAGACAATTATAAATGTTAAATGCCATTATGCCCAAGCTATCATTGGGAACTGCATTTTCACTGTTGGCGATTGTGCATCTATAAAAGGTGAAGGAGAACAAAAACATATTGGCAAGATTGTTGAATTTTTCCTAACAACTGATAGCAAAAAGTATTTCCGAGTCCAATGGTTTTACAGAATTCAAGATACAGTTGTCCAAGATGAAGGTGATTATCATGACAAGAGGCGTTTATTCTATTCATCAATAATGAATGATAATTTAATAGATTCCATAATAGAGAAAGTCAGTGTTAGATATAGAACACCTAAGGTTGGTCAGAAGTTGGCTTCTAATTTACCATCTGACTTCTATTATGATATGGAATATTGCGTTGATTACTCTACATTCCGTAAAATACCAACAGATGATGCTGTTGAGATTAACAAGTTATCACAACCTGCTGTTCTTGAGAGTCACTCAACAGAGGCATCTACTATTACCAAGAGTCTGCCTAATCCTGAGTTGCACAGAACAGAACTAGCATTACTAGATCTTTATTCTGGCTGTGGTGGCATGTCAACTGGACTGTGCTTAGGTGCCAAAATATCATCAGTTAATCTTGTCACGAGATGGGCTGTTGATAGTAATAGATATGCAAGTAAAAGCTTAAAACTAAACCATCCAGAGACACATGTGAGAAATGAATCTGCAGAGGACTTTCTGCAACTATTGAAGGAGTGGGAGAAGCTATGCAAACGGTATAATGTTGGCGACACAAAAAATAAAATTCCATTACGGTCAAGGAACTCAGGAGGAAAGAAGCAAGTGAATTCTAAAGCTGATGATAGTTCTGATGATGATTTTGAAGTATCTAGGATTGTTGATATATGCTACGGTGATCCCAGTAAAACAGAGAAACATGGTCTATATTTGAAGGTACACTGGAAGGGTTACGATGAAAGTGAAGATACATGGGAACCAATTGAAAACTTACGCAATTGTAAGGAAAGCTTGCAGGAGTTTGTGAGAGAGGGCATACAATCAAAACTCTTGCCCCTTCCTGGTGAAGTTGATGTTGTTTGTGGAGGTCCTCCTTGTCAAGGAATTAGTGGATATAATCGTTATAGAAACATGGAATCACCATTGGACGATGAAAGAAATCACCAGATAGTAGTTTTCATGGACATAGCGACATATCTGAAGCCTAAGTATGTTTTAATGGAGAATGTGGTTGACATATTGAGATTTGACAAGGGTCGTCTGGTACACATGCATTACCAAGCAAGATTGGGAATTGTTGCAGCTGGCTGTTATGGTCTTCCACAATTTCGATTGCGTGTTTTCATGTGGGGGGCTCATCCTGATGAGGTTCTACCCCAATTTCCATTGCCATCACATGATGTTATTATGAGATACTGGCCTCCGCCTGAGTTTGAGCGCAATACTGTTGCTTATGATGAGGAACAACAACGAGAAGTAGAGGAAGCTCTTGTAATTCAAGATGCCATCTCTGATCTTCCTCCTGTCACAAACTTTGAAACTCGGGACGAAATGCCATACCAAAATCCTCCAGAAACAGAATTTCAAAGATATATACGATCAACTAAACATGAGGTGACTGGATCCACATTAAATGGAGCAACAAAGAAAAAGCATATGTTATATGATCACAGACCCCTCTTTATGTCTGAAGATGACTACCTACGTGTTTGTCAAATTCCCAAACGGAAGGGAGCAAATTTCCGTGATCTTCCTGGAATTGTTGTAGGATCTGACAATGTGGTCCCAGATTACTGCTTCACTTATGAACAGGGGAGGTCCAAGAGGCCATTTGGACGATTGTGGTGGGATGAAACGGTTCCTACCGCACTAACCAGCCCAAGTTGTCATAACCAGGTAGTAATACATCCAGAGCAGGATCGAATCCTCACCATACGAGAATTTGCCAGGCTGCAAGGATTTCATGATTATTATAGATTTTGTGGGTCTGTGAAAGAAAGGTACCGTCAAATTGGAAATGCAGTTGCTGTACCTGTTTCGCGAGCTTTAGGATATGCCCTAGGAATTGCACATAGAAAGCTTGGTAGTAATGAACATCATATGACCCTCCCACCCAAGTTCTCTCTTTCCAATTATGTTCAATTATCAAGTAATCATGTCGGCGACACGACCTTTTTTGAGTCGAAGGATGTTGTCAGTGCTGCTGTTCTTGAGCCAAAAGATGTTGGCGACACCACTATTCTTGAGTCGAAAGATGTTGGCGATACTGCCATTTTTGAGTCGAAAGATGTTTGTGAAACCGCCATTCTTGAGCCAAAAGATGTTGGCGACACCACTATTCTTGAGTCGAAAGATGTTGGCGATACTGCCATTTTTGAGTCGAAAGATGTTTGTGAAATCGCCATTCTTGAGTCGACAGATGTTTGTGGAACTGCCATTTCTGAGTCGAAAAATGTTGGCGACACCATTATTCTTGAGTCGAAAGATGTCGGCGATACCACCCTTTTTGAGTCGAAAGATGTTGGCGATGTTAACACTCATGAGTTGAAAGATGTTTGTGAAACTGCCATTCTTGAGTCGACAGATGTTTGTGAAACTGCCATTTTTTAG
Protein sequence

>Msa0713080

MTEESPPEVFQAEHADESQRSPVVKSAPSDVIDGNVRSNGKSGRKKGRVSEMKLSEENRRRSPRLSGASDGRGSSSCSVKLRRTRSSNGIENTQLVFSQGKRTPKVVHEKNKKRKVNSISIELSNSPVEQHSPEVDDINCSALSLDEITSPTWFENGGTNSDYFASSVLKGKPPKKKFKSSASSTKGCMYGRNIPSFIGDPIPDDEAHKKWGWRYELKDKQCNDKVFIINEDEEDETIINVKCHYAQAIIGNCIFTVGDCASIKGEGEQKHIGKIVEFFLTTDSKKYFRVQWFYRIQDTVVQDEGDYHDKRRLFYSSIMNDNLIDSIIEKVSVRYRTPKVGQKLASNLPSDFYYDMEYCVDYSTFRKIPTDDAVEINKLSQPAVLESHSTEASTITKSLPNPELHRTELALLDLYSGCGGMSTGLCLGAKISSVNLVTRWAVDSNRYASKSLKLNHPETHVRNESAEDFLQLLKEWEKLCKRYNVGDTKNKIPLRSRNSGGKKQVNSKADDSSDDDFEVSRIVDICYGDPSKTEKHGLYLKVHWKGYDESEDTWEPIENLRNCKESLQEFVREGIQSKLLPLPGEVDVVCGGPPCQGISGYNRYRNMESPLDDERNHQIVVFMDIATYLKPKYVLMENVVDILRFDKGRLVHMHYQARLGIVAAGCYGLPQFRLRVFMWGAHPDEVLPQFPLPSHDVIMRYWPPPEFERNTVAYDEEQQREVEEALVIQDAISDLPPVTNFETRDEMPYQNPPETEFQRYIRSTKHEVTGSTLNGATKKKHMLYDHRPLFMSEDDYLRVCQIPKRKGANFRDLPGIVVGSDNVVPDYCFTYEQGRSKRPFGRLWWDETVPTALTSPSCHNQVVIHPEQDRILTIREFARLQGFHDYYRFCGSVKERYRQIGNAVAVPVSRALGYALGIAHRKLGSNEHHMTLPPKFSLSNYVQLSSNHVGDTTFFESKDVVSAAVLEPKDVGDTTILESKDVGDTAIFESKDVCETAILEPKDVGDTTILESKDVGDTAIFESKDVCEIAILESTDVCGTAISESKNVGDTIILESKDVGDTTLFESKDVGDVNTHELKDVCETAILESTDVCETAIF*