AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0867060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867060 MtrunA17_Chr4g0070981 99.516 413 2 0 1 413 1 413 0.0 850
Msa0867060 MtrunA17_Chr2g0299681 93.705 413 26 0 1 413 1 413 0.0 803
Msa0867060 MtrunA17_Chr8g0342861 91.525 413 35 0 1 413 1 413 0.0 785
Msa0867060 MtrunA17_Chr2g0329931 91.525 413 35 0 1 413 1 413 0.0 782
Msa0867060 MtrunA17_Chr2g0297261 64.879 373 131 0 41 413 34 406 0.0 512
Msa0867060 MtrunA17_Chr1g0169331 60.152 394 120 5 56 413 6 398 5.30e-161 458
Msa0867060 MtrunA17_Chr8g0342851 61.272 346 102 4 71 413 3 319 8.21e-140 402
Msa0867060 MtrunA17_Chr7g0247191 39.948 388 220 3 19 406 139 513 9.25e-91 283
Msa0867060 MtrunA17_Chr7g0247181 39.433 388 222 3 19 406 129 503 1.34e-89 280
Msa0867060 MtrunA17_Chr7g0247221 39.433 388 222 3 19 406 132 506 2.22e-89 280
Msa0867060 MtrunA17_Chr4g0003441 39.402 368 217 6 47 409 114 480 1.55e-75 243
Msa0867060 MtrunA17_Chr1g0149251 38.872 337 200 6 78 409 1 336 1.83e-70 225
Msa0867060 MtrunA17_Chr3g0107851 35.467 375 220 5 40 396 116 486 9.07e-68 224
Msa0867060 MtrunA17_Chr1g0179761 35.492 417 227 13 28 411 71 478 2.59e-66 219
Msa0867060 MtrunA17_Chr7g0271121 38.304 342 196 8 66 396 131 468 2.14e-62 214
Msa0867060 MtrunA17_Chr3g0095031 33.413 419 258 8 2 411 59 465 1.31e-61 208
Msa0867060 MtrunA17_Chr2g0330401 33.611 360 233 2 41 394 96 455 2.77e-61 206
Msa0867060 MtrunA17_Chr3g0121351 34.103 390 234 7 40 407 144 532 8.82e-61 207
Msa0867060 MtrunA17_Chr4g0076491 33.770 382 215 6 47 397 293 667 1.53e-60 208
Msa0867060 MtrunA17_Chr5g0442191 34.501 371 230 7 45 406 85 451 3.14e-60 205
Msa0867060 MtrunA17_Chr6g0483491 32.884 371 245 3 41 408 10 379 1.33e-59 200
Msa0867060 MtrunA17_Chr7g0236841 32.884 371 245 3 41 408 10 379 3.19e-59 199
Msa0867060 MtrunA17_Chr7g0270131 34.648 355 223 6 41 387 232 585 5.16e-59 205
Msa0867060 MtrunA17_Chr6g0449741 33.947 380 215 6 47 397 255 627 6.81e-59 203
Msa0867060 MtrunA17_Chr1g0193491 35.196 358 204 8 45 384 118 465 3.05e-58 201
Msa0867060 MtrunA17_Chr4g0063551 33.673 392 231 6 42 407 141 529 6.44e-58 201
Msa0867060 MtrunA17_Chr4g0040761 32.162 370 247 3 42 407 20 389 6.27e-57 199
Msa0867060 MtrunA17_Chr2g0310581 32.292 384 253 4 17 395 31 412 1.02e-56 194
Msa0867060 MtrunA17_Chr1g0176041 31.701 388 245 5 40 407 153 540 1.84e-55 193
Msa0867060 MtrunA17_Chr1g0157691 30.848 389 250 8 41 413 147 532 2.67e-55 192
Msa0867060 MtrunA17_Chr3g0098121 34.153 366 229 5 40 396 151 513 1.51e-54 192
Msa0867060 MtrunA17_Chr1g0200181 30.848 389 250 8 41 413 145 530 1.70e-54 190
Msa0867060 MtrunA17_Chr2g0277821 33.594 384 239 5 41 412 504 883 2.60e-54 194
Msa0867060 MtrunA17_Chr6g0449911 33.681 383 237 9 41 412 165 541 3.44e-54 191
Msa0867060 MtrunA17_Chr5g0409981 33.505 388 237 7 28 403 95 473 5.65e-53 184
Msa0867060 MtrunA17_Chr2g0293631 32.162 370 240 5 24 387 483 847 2.13e-52 188
Msa0867060 MtrunA17_Chr6g0461751 32.418 364 234 6 41 394 140 501 2.65e-49 175
Msa0867060 MtrunA17_Chr2g0300291 33.243 367 232 6 40 396 140 503 5.01e-49 177
Msa0867060 MtrunA17_Chr2g0307471 31.335 367 233 9 40 392 90 451 1.95e-45 165
Msa0867060 MtrunA17_Chr4g0062301 30.919 359 226 10 50 392 106 458 3.44e-43 159
Msa0867060 MtrunA17_Chr7g0263771 28.900 391 251 7 34 412 129 504 2.79e-42 157
Msa0867060 MtrunA17_Chr3g0114081 29.730 370 232 7 47 389 22 390 5.90e-42 155
Msa0867060 MtrunA17_Chr6g0475251 30.199 351 218 6 45 380 115 453 1.89e-40 152
Msa0867060 MtrunA17_Chr2g0309551 25.837 418 245 7 41 396 109 523 3.71e-40 150
Msa0867060 MtrunA17_Chr4g0058591 30.938 320 215 2 41 354 202 521 2.46e-39 147
Msa0867060 MtrunA17_Chr7g0236831 25.850 441 241 10 39 399 161 595 2.12e-37 144
Msa0867060 MtrunA17_Chr8g0347171 27.968 379 234 9 42 391 161 529 3.94e-37 142
Msa0867060 MtrunA17_Chr8g0347161 29.167 360 232 9 42 380 103 460 7.90e-37 141
Msa0867060 MtrunA17_Chr1g0204391 28.610 367 219 7 49 380 52 410 3.08e-36 139
Msa0867060 MtrunA17_Chr8g0386451 28.052 385 253 9 42 406 289 669 3.31e-36 140
Msa0867060 MtrunA17_Chr8g0347151 27.704 379 235 8 42 391 202 570 3.75e-36 140
Msa0867060 MtrunA17_Chr6g0466611 28.947 380 242 9 41 396 142 517 5.87e-35 137
Msa0867060 MtrunA17_Chr4g0025141 36.715 207 116 5 214 405 14 220 2.64e-34 127
Msa0867060 MtrunA17_Chr1g0192021 26.895 409 244 8 41 397 26 431 2.86e-34 134
Msa0867060 MtrunA17_Chr4g0034411 28.809 361 235 11 68 413 102 455 5.97e-33 131
Msa0867060 MtrunA17_Chr5g0443991 28.571 350 229 10 68 402 102 445 1.85e-32 129
Msa0867060 MtrunA17_Chr3g0137901 39.024 164 98 2 247 409 10 172 8.56e-32 119
Msa0867060 MtrunA17_Chr5g0429221 26.975 367 248 7 41 396 3 360 1.06e-29 119
Msa0867060 MtrunA17_Chr3g0137891 42.236 161 90 3 78 235 1 161 8.01e-28 110
Msa0867060 MtrunA17_Chr3g0145781 25.728 412 252 13 24 394 120 518 1.54e-25 108
Msa0867060 MtrunA17_Chr4g0039471 37.097 186 114 2 41 223 223 408 8.50e-24 102
Msa0867060 MtrunA17_Chr4g0004301 25.729 377 210 13 79 388 71 444 3.64e-23 101
Msa0867060 MtrunA17_Chr5g0434301 25.729 377 210 13 79 388 71 444 1.70e-22 99.4
Msa0867060 MtrunA17_Chr4g0025131 35.802 162 97 3 41 197 56 215 1.83e-22 96.7
Msa0867060 MtrunA17_Chr4g0062321 29.237 236 157 6 117 348 4 233 1.91e-22 95.5
Msa0867060 MtrunA17_Chr4g0025101 30.252 238 100 7 198 411 7 202 3.71e-22 94.0
Msa0867060 MtrunA17_Chr4g0074521 26.184 359 223 11 49 372 90 441 3.83e-22 98.2
Msa0867060 MtrunA17_Chr8g0349951 37.500 136 84 1 41 175 10 145 1.19e-18 82.4
Msa0867060 MtrunA17_Chr4g0029191 31.183 186 118 5 41 217 44 228 6.24e-18 85.9
Msa0867060 MtrunA17_Chr4g0029191 35.106 94 61 0 310 403 392 485 8.68e-14 73.2
Msa0867060 MtrunA17_Chr2g0301281 30.645 186 119 5 41 217 41 225 1.91e-17 84.3
Msa0867060 MtrunA17_Chr2g0301281 34.021 97 63 1 310 406 389 484 1.08e-13 72.8
Msa0867060 MtrunA17_Chr1g0155201 27.660 235 143 9 160 387 13 227 5.23e-15 75.9
Msa0867060 MtrunA17_Chr8g0354761 23.204 362 244 11 64 404 31 379 1.90e-14 74.7
Msa0867060 MtrunA17_Chr0c30g0494091 30.065 153 98 2 49 192 90 242 1.66e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867060 AT3G13920.1 91.283 413 35 1 1 413 1 412 0.0 776
Msa0867060 AT1G54270.1 91.304 414 33 2 1 413 1 412 0.0 771
Msa0867060 AT3G13920.4 90.073 413 35 2 1 413 1 407 0.0 759
Msa0867060 AT1G72730.1 88.164 414 48 1 1 413 1 414 0.0 756
Msa0867060 AT1G54270.2 90.097 414 33 3 1 413 1 407 0.0 754
Msa0867060 AT3G13920.3 93.766 385 24 0 29 413 18 402 0.0 745
Msa0867060 AT3G13920.2 91.560 391 32 1 1 391 1 390 0.0 736
Msa0867060 AT3G13920.5 91.560 391 32 1 1 391 5 394 0.0 736
Msa0867060 AT3G19760.1 64.191 377 135 0 37 413 32 408 4.66e-180 508
Msa0867060 AT1G51380.1 58.808 369 152 0 41 409 23 391 7.95e-162 461
Msa0867060 AT1G51380.2 59.127 252 103 0 41 292 23 274 2.51e-107 318
Msa0867060 AT3G61240.2 40.722 388 217 4 22 409 117 491 9.80e-93 288
Msa0867060 AT3G61240.1 40.722 388 217 4 22 409 117 491 9.80e-93 288
Msa0867060 AT4G00660.1 38.875 391 226 3 19 409 121 498 1.03e-90 283
Msa0867060 AT4G00660.2 38.875 391 226 3 19 409 121 498 1.03e-90 283
Msa0867060 AT2G45810.1 40.415 386 217 4 22 407 147 519 2.75e-90 283
Msa0867060 AT1G51380.4 56.872 211 91 0 41 251 23 233 6.45e-82 254
Msa0867060 AT1G51380.3 56.872 211 91 0 41 251 23 233 8.78e-82 253
Msa0867060 AT5G11170.1 38.046 389 234 7 27 409 32 419 3.89e-76 243
Msa0867060 AT5G11200.1 38.046 389 234 7 27 409 32 419 3.89e-76 243
Msa0867060 AT5G11170.2 38.872 337 200 6 78 409 1 336 1.87e-69 223
Msa0867060 AT5G11200.3 34.419 430 234 8 27 409 32 460 9.96e-68 222
Msa0867060 AT3G53110.1 35.000 400 232 11 33 407 81 477 2.86e-67 222
Msa0867060 AT5G26742.1 35.000 420 244 10 9 413 80 485 9.00e-65 221
Msa0867060 AT5G26742.2 35.000 420 244 10 9 413 80 485 9.13e-65 221
Msa0867060 AT5G26742.3 35.844 385 215 10 44 413 25 392 2.22e-63 215
Msa0867060 AT2G33730.1 34.937 395 225 6 41 410 314 701 2.57e-63 216
Msa0867060 AT5G63120.2 34.392 378 242 2 42 413 167 544 6.53e-63 213
Msa0867060 AT3G22330.1 32.710 428 264 9 3 411 58 480 1.92e-62 212
Msa0867060 AT3G22310.2 34.309 376 234 6 45 411 121 492 2.85e-62 211
Msa0867060 AT3G22310.1 34.309 376 234 6 45 411 121 492 3.75e-62 211
Msa0867060 AT1G55150.1 34.571 350 223 2 41 384 100 449 4.17e-62 208
Msa0867060 AT1G55150.2 34.571 350 223 2 41 384 125 474 5.67e-62 209
Msa0867060 AT1G77030.1 32.432 370 246 3 42 407 30 399 5.42e-60 209
Msa0867060 AT3G58570.1 33.416 401 236 8 33 406 136 532 2.36e-58 202
Msa0867060 AT3G58510.1 33.247 385 227 8 43 406 160 535 6.95e-58 200
Msa0867060 AT3G58510.3 33.247 385 227 8 43 406 160 535 6.95e-58 200
Msa0867060 AT3G58510.2 33.247 385 227 8 43 406 160 535 6.95e-58 200
Msa0867060 AT2G42520.2 33.017 421 248 10 16 406 129 545 1.36e-57 199
Msa0867060 AT2G42520.1 33.017 421 248 10 16 406 129 545 1.36e-57 199
Msa0867060 AT2G42520.3 33.017 421 248 10 16 406 129 545 1.36e-57 199
Msa0867060 AT5G14610.5 34.204 383 235 10 41 412 170 546 5.12e-57 198
Msa0867060 AT5G14610.6 34.204 383 235 10 41 412 162 538 5.41e-57 198
Msa0867060 AT5G14610.2 34.204 383 235 10 41 412 162 538 5.67e-57 198
Msa0867060 AT5G60990.1 32.143 392 250 5 36 413 5 394 3.04e-56 192
Msa0867060 AT1G16280.1 32.964 361 237 2 41 396 59 419 1.28e-55 191
Msa0867060 AT4G16630.1 33.867 375 239 4 31 396 155 529 1.40e-55 196
Msa0867060 AT1G20920.2 33.511 376 240 5 46 412 197 571 1.50e-55 196
Msa0867060 AT3G01540.1 33.862 378 243 6 41 412 159 535 2.40e-55 193
Msa0867060 AT3G01540.4 33.862 378 243 6 41 412 159 535 2.43e-55 193
Msa0867060 AT3G01540.2 33.862 378 243 6 41 412 159 535 2.43e-55 193
Msa0867060 AT3G01540.3 33.862 378 243 6 41 412 159 535 2.43e-55 193
Msa0867060 AT2G47330.1 34.807 362 213 8 41 387 229 582 2.53e-55 195
Msa0867060 AT3G06480.1 33.681 383 241 6 39 412 434 812 6.06e-55 196
Msa0867060 AT1G20920.4 33.511 376 240 5 46 412 535 909 3.42e-54 194
Msa0867060 AT1G20920.6 33.511 376 240 5 46 412 535 909 3.42e-54 194
Msa0867060 AT1G20920.3 33.511 376 240 5 46 412 535 909 3.42e-54 194
Msa0867060 AT1G20920.7 33.511 376 240 5 46 412 535 909 3.42e-54 194
Msa0867060 AT1G20920.5 33.511 376 240 5 46 412 535 909 3.42e-54 194
Msa0867060 AT1G20920.1 33.511 376 240 5 46 412 535 909 3.42e-54 194
Msa0867060 AT5G14610.7 33.062 369 230 9 55 412 45 407 8.21e-53 184
Msa0867060 AT5G14610.3 33.062 369 230 9 55 412 45 407 8.21e-53 184
Msa0867060 AT5G51280.1 30.412 388 251 7 41 412 147 531 1.07e-52 185
Msa0867060 AT4G33370.1 31.443 388 247 8 41 412 98 482 1.17e-52 184
Msa0867060 AT1G28180.1 35.072 345 204 7 79 410 12 349 6.01e-52 178
Msa0867060 AT5G14610.1 32.984 382 239 10 42 412 231 606 6.69e-52 185
Msa0867060 AT3G02065.3 30.750 400 260 7 6 394 80 473 7.36e-52 181
Msa0867060 AT3G02065.2 30.750 400 260 7 6 394 80 473 7.36e-52 181
Msa0867060 AT1G31970.1 32.713 376 235 6 41 403 117 487 2.96e-50 178
Msa0867060 AT3G18600.1 31.937 382 246 7 41 412 90 467 3.67e-50 178
Msa0867060 AT1G12770.2 27.163 416 241 6 41 396 111 524 1.11e-48 174
Msa0867060 AT1G12770.1 27.163 416 241 6 41 396 111 524 1.11e-48 174
Msa0867060 AT3G09720.2 29.843 382 259 5 34 412 138 513 1.36e-47 171
Msa0867060 AT3G09720.1 29.843 382 259 5 34 412 138 513 1.36e-47 171
Msa0867060 AT3G02065.1 32.523 329 209 6 77 394 10 336 7.59e-47 165
Msa0867060 AT3G09620.2 32.267 375 211 8 46 409 403 745 1.43e-46 172
Msa0867060 AT3G09620.1 32.267 375 211 8 46 409 402 744 1.52e-46 172
Msa0867060 AT5G65900.1 31.180 356 235 5 41 387 155 509 1.62e-45 166
Msa0867060 AT5G05450.1 29.737 380 239 9 50 404 26 402 6.37e-44 161
Msa0867060 AT5G63120.1 34.091 308 197 2 42 343 167 474 8.65e-44 159
Msa0867060 AT5G63120.3 34.091 308 197 2 42 343 167 474 9.07e-44 159
Msa0867060 AT5G63120.4 34.091 308 197 2 42 343 167 474 9.07e-44 159
Msa0867060 AT5G63120.5 34.091 308 197 2 42 343 167 474 9.07e-44 159
Msa0867060 AT5G62190.1 30.978 368 230 8 55 405 111 471 4.85e-43 160
Msa0867060 AT1G71370.1 30.056 356 233 7 47 387 23 377 2.28e-42 157
Msa0867060 AT5G14610.4 32.934 334 207 10 41 363 170 497 3.44e-41 152
Msa0867060 AT3G06480.2 32.198 323 206 6 39 352 434 752 1.36e-38 148
Msa0867060 AT5G63630.1 27.020 396 247 8 42 407 56 439 1.02e-37 143
Msa0867060 AT5G63630.2 27.020 396 247 8 42 407 250 633 1.55e-36 142
Msa0867060 AT2G07750.1 27.073 410 256 11 29 407 362 759 2.55e-36 141
Msa0867060 AT5G08620.1 27.822 381 240 6 42 395 82 454 3.78e-36 139
Msa0867060 AT5G08610.1 27.297 381 242 6 42 395 384 756 1.04e-35 140
Msa0867060 AT5G11200.2 37.247 247 140 6 27 267 32 269 1.06e-34 134
Msa0867060 AT5G11200.2 37.356 174 106 3 238 409 306 478 5.13e-29 118
Msa0867060 AT1G63250.1 27.047 403 253 10 35 407 321 712 2.85e-34 135
Msa0867060 AT4G34910.1 26.166 386 228 7 41 372 47 429 3.61e-33 131
Msa0867060 AT5G54910.1 27.763 371 244 10 42 396 73 435 2.97e-32 129
Msa0867060 AT5G19210.2 27.551 392 234 12 49 402 85 464 1.87e-31 125
Msa0867060 AT2G40700.1 25.393 445 249 13 41 403 31 474 1.99e-31 126
Msa0867060 AT3G16840.2 25.968 439 238 11 39 400 190 618 1.21e-30 125
Msa0867060 AT3G16840.1 25.968 439 238 11 39 400 189 617 1.44e-30 124
Msa0867060 AT4G09730.1 25.773 388 252 9 37 396 109 488 1.89e-30 124
Msa0867060 AT1G71280.2 29.073 313 180 10 47 345 24 308 6.39e-29 115
Msa0867060 AT3G06980.1 28.900 391 236 13 41 394 375 760 9.84e-29 119
Msa0867060 AT1G71280.1 29.167 312 181 9 47 345 24 308 5.04e-28 115
Msa0867060 AT4G15850.1 25.066 379 208 13 79 387 74 446 4.42e-25 107
Msa0867060 AT5G19210.1 26.006 323 179 11 123 402 2 307 1.80e-17 83.2
Msa0867060 AT5G19210.3 26.006 323 179 11 123 402 2 307 1.80e-17 83.2
Msa0867060 AT1G28180.2 38.095 126 55 4 63 177 5 118 5.10e-14 68.9

Find 148 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCATTGTTGAATTCATTAT+TGG 0.154821 5_4:-69717183 Msa0867060:three_prime_UTR
TTCCTTCGTGACAAAGTTAA+TGG 0.209772 5_4:+69717465 None:intergenic
AAAGAGGACACTTGTTAAAA+TGG 0.225467 5_4:-69721500 Msa0867060:five_prime_UTR
ATTATGCGTGAATTCCGTTC+TGG 0.257405 5_4:-69717640 Msa0867060:CDS
AAGCAGAAATAAAACCAAAA+AGG 0.257431 5_4:+69717281 None:intergenic
ACAAACATCTTGATGTAATC+TGG 0.288428 5_4:+69718825 None:intergenic
GACACTTGTTAAAATGGTTT+TGG 0.290357 5_4:-69721494 Msa0867060:five_prime_UTR
CTAACACATTGTAAAACTTC+TGG 0.300063 5_4:+69717419 None:intergenic
CGCTAGTTGGTCAAACTAAC+TGG 0.301312 5_4:+69721428 None:intergenic
CGGAGTTAGTTAACGGAGTT+AGG 0.302052 5_4:+69721236 None:intergenic
ACTAATTTCCGACTAATATA+TGG 0.309434 5_4:+69717344 None:intergenic
CAGCTGATGGAGATGAATTC+TGG 0.313882 5_4:-69720321 Msa0867060:CDS
TAGTCGGAAATTAGTACTTT+TGG 0.320355 5_4:-69717336 Msa0867060:three_prime_UTR
GAATTCATTATTGGCCAAAT+TGG 0.323036 5_4:-69717174 Msa0867060:three_prime_UTR
TTGACTGAGAGGGGTAAATT+AGG 0.328799 5_4:-69721405 Msa0867060:five_prime_UTR
CACTCTTACTTATTTCTAGA+AGG 0.332605 5_4:-69717140 Msa0867060:three_prime_UTR
AAACTGCTTAATACCCTCTA+AGG 0.342172 5_4:+69717855 None:intergenic
TCAACTCCGCGGCGTAGATC+CGG 0.346393 5_4:-69721275 Msa0867060:five_prime_UTR
TTCTATCTTGCAGTTATGGC+TGG 0.354302 5_4:-69720523 Msa0867060:intron
TTTGAAGTTGTCTGAATATC+GGG 0.356229 5_4:-69717215 Msa0867060:three_prime_UTR
GCGTGATGAGCTTACCTTAG+AGG 0.362955 5_4:-69717869 Msa0867060:CDS
GTGAGTGTCTAACACCAATT+TGG 0.377530 5_4:+69717160 None:intergenic
TTCTCGAGGTTTCAAAGATC+AGG 0.384116 5_4:-69718778 Msa0867060:intron
CAACAGGCTCAGTCTGGAAC+CGG 0.398765 5_4:-69719119 Msa0867060:CDS
ATACGATAAAACCAAGCAAC+AGG 0.405290 5_4:+69721343 None:intergenic
CTTTACCTTACCCTGTTGCT+TGG 0.405864 5_4:-69721354 Msa0867060:five_prime_UTR
TTATGCGTGAATTCCGTTCT+GGG 0.406482 5_4:-69717639 Msa0867060:CDS
CATAATATCAACGAGTCTAA+TGG 0.408740 5_4:+69717009 None:intergenic
TTATGTCAATGTTGAGAAAG+AGG 0.412746 5_4:-69717833 Msa0867060:CDS
CAACTCCGCGGCGTAGATCC+GGG 0.416571 5_4:-69721274 Msa0867060:five_prime_UTR
CTCAGGGGCATTTATGCATA+TGG 0.421726 5_4:-69720241 Msa0867060:intron
GGGACTTGATGTTATTCAAC+AGG 0.422508 5_4:-69719135 Msa0867060:CDS
AGAAGCTCAGCAACATTTGA+TGG 0.425416 5_4:+69717385 None:intergenic
TTCGGTTTAATCCACTTTCA+AGG 0.427640 5_4:-69721207 Msa0867060:intron
TCACATTGTAGTCAAGTTGC+TGG 0.431595 5_4:+69719066 None:intergenic
CTTTGTCTGTTTGATAGTCT+TGG 0.431769 5_4:-69717253 Msa0867060:three_prime_UTR
TGTGACTCAGTGCCAGGCCT+TGG 0.434416 5_4:-69719048 Msa0867060:CDS
TTATAACCAGAGACACTTGT+TGG 0.437621 5_4:+69717566 None:intergenic
GTTATTCAACAGGCTCAGTC+TGG 0.446972 5_4:-69719125 Msa0867060:CDS
GATCTACGCCGCGGAGTTGA+GGG 0.454750 5_4:+69721278 None:intergenic
CTTGTGATCTCAAGTGCCTC+AGG 0.456300 5_4:+69717928 None:intergenic
GCCATCTGCTATTCAGCAAA+GGG 0.457115 5_4:-69719177 Msa0867060:CDS
CATGTTGTGGTTGGTACTCC+TGG 0.466328 5_4:-69718885 Msa0867060:CDS
TGGAGACTATCTAGGTGTTA+AGG 0.466474 5_4:-69718970 Msa0867060:CDS
TGATGTCCAACAAGTGTCTC+TGG 0.467134 5_4:-69717572 Msa0867060:CDS
AAGCAACAGGGTAAGGTAAA+GGG 0.468637 5_4:+69721356 None:intergenic
CGTGAGTAGCTGAGACTGTA+TGG 0.474930 5_4:+69717692 None:intergenic
ATTGGTCGTAGTGGAAGGTT+TGG 0.483022 5_4:-69717502 Msa0867060:CDS
CTACAATGTGACTCAGTGCC+AGG 0.484625 5_4:-69719054 Msa0867060:CDS
GAGAAGGTTATGCGTGCGCT+TGG 0.485297 5_4:-69718990 Msa0867060:CDS
CAAGCAACAGGGTAAGGTAA+AGG 0.487292 5_4:+69721355 None:intergenic
AAAACAGCAACTTTCTGCTC+TGG 0.488201 5_4:-69719095 Msa0867060:CDS
TCTCTCAGGATTGCAGCTGA+TGG 0.488638 5_4:-69720334 Msa0867060:intron
CGTGCGCTTGGAGACTATCT+AGG 0.494302 5_4:-69718978 Msa0867060:CDS
CAAACATCTTGATGTAATCT+GGG 0.495526 5_4:+69718826 None:intergenic
ACACCAGGAGGAAAGTTGAT+TGG 0.496681 5_4:-69717741 Msa0867060:CDS
GAGGGGTCACAATTCGATGC+TGG 0.497994 5_4:-69720490 Msa0867060:CDS
TGAGAAAGAGGAGTGGAAGC+TGG 0.499050 5_4:-69717821 Msa0867060:CDS
CCCTCTCAGTCAACGCTAGT+TGG 0.499173 5_4:+69721415 None:intergenic
AGCATCGAATTGTGACCCCT+CGG 0.501118 5_4:+69720492 None:intergenic
TCTTCTTAGGGTTAGAAAAG+AGG 0.504060 5_4:-69721516 None:intergenic
GATAGTTCTCAGGCTGGGTA+GGG 0.504928 5_4:+69717533 None:intergenic
TGGAATGAGGGAAACGGAAA+AGG 0.507036 5_4:-69721471 Msa0867060:five_prime_UTR
AGTGGAAGGTTTGGTAGAAA+AGG 0.507500 5_4:-69717493 Msa0867060:CDS
ATCAAGTGGTGTTCATGTTG+TGG 0.507583 5_4:-69718898 Msa0867060:CDS
TTTAATAACTACCGATCTGT+TGG 0.509076 5_4:-69717605 Msa0867060:CDS
TAGCTGAGACTGTATGGTCT+CGG 0.513297 5_4:+69717698 None:intergenic
GGATCTACGCCGCGGAGTTG+AGG 0.513351 5_4:+69721277 None:intergenic
GATATCTTTCAGCTGCTGCC+AGG 0.515537 5_4:-69717988 Msa0867060:CDS
TAAAACCAAGCAACAGGGTA+AGG 0.520451 5_4:+69721349 None:intergenic
AGGGGTCACAATTCGATGCT+GGG 0.520845 5_4:-69720489 Msa0867060:CDS
CTCTGCTACAATGCCTCCTG+AGG 0.521626 5_4:-69717944 Msa0867060:CDS
GAGAACTATCTCCATCGTAT+TGG 0.523557 5_4:-69717520 Msa0867060:CDS
GCATCGAATTGTGACCCCTC+GGG 0.523997 5_4:+69720493 None:intergenic
GGAGTTAGTTAACGGAGTTA+GGG 0.527772 5_4:+69721237 None:intergenic
ATAGCGAGATACCTTGAAAG+TGG 0.529238 5_4:+69721196 None:intergenic
ATCGTATTGGTCGTAGTGGA+AGG 0.529668 5_4:-69717507 Msa0867060:CDS
AAAGCGACGGAGTTAGTTAA+CGG 0.531964 5_4:+69721229 None:intergenic
CCCCTTTGCTGAATAGCAGA+TGG 0.532541 5_4:+69719176 None:intergenic
TGCTGAGCAAGCTCACGAGT+TGG 0.532963 5_4:+69719017 None:intergenic
TTTGTCCTCCATATATTAGT+CGG 0.533852 5_4:-69717352 Msa0867060:three_prime_UTR
TTACATCAAGATGTTTGTGT+TGG 0.535747 5_4:-69718820 Msa0867060:CDS
GTTTGTTAGAGAATCTCCTC+AGG 0.536968 5_4:-69720258 Msa0867060:CDS
CAACCAATCAACTTTCCTCC+TGG 0.537041 5_4:+69717738 None:intergenic
CTCAGCTACTCACGGAGACA+TGG 0.539056 5_4:-69717683 Msa0867060:CDS
AACATCAAGTCCCTTGCAGA+AGG 0.540831 5_4:+69719145 None:intergenic
CTCCATCGTATTGGTCGTAG+TGG 0.541717 5_4:-69717511 Msa0867060:CDS
TTCACGCATAATAATGTCCC+TGG 0.549331 5_4:+69717651 None:intergenic
CGTGATGAGCTTACCTTAGA+GGG 0.550253 5_4:-69717868 Msa0867060:CDS
GACCAACGTATTCTATCAAG+TGG 0.551798 5_4:-69718912 Msa0867060:CDS
AGATAGTTCTCAGGCTGGGT+AGG 0.552286 5_4:+69717532 None:intergenic
ACCAACTAGCGTTGACTGAG+AGG 0.554134 5_4:-69721416 Msa0867060:five_prime_UTR
ATACGATGGAGATAGTTCTC+AGG 0.557654 5_4:+69717523 None:intergenic
CGCTTCACAAGGATCCTCAC+AGG 0.561401 5_4:+69717889 None:intergenic
CTGAGGCACTTGAGATCACA+AGG 0.563772 5_4:-69717927 Msa0867060:CDS
AGCATATCAAACACACGACC+AGG 0.568622 5_4:+69718867 None:intergenic
AGTGGTGTTCATGTTGTGGT+TGG 0.573575 5_4:-69718894 Msa0867060:CDS
AACAGGCTCAGTCTGGAACC+GGG 0.573707 5_4:-69719118 Msa0867060:CDS
ACTCCTACTTGAATCTTACC+TGG 0.574870 5_4:+69717970 None:intergenic
AGCCATCTGCTATTCAGCAA+AGG 0.576198 5_4:-69719178 Msa0867060:CDS
GATGGAGATAGTTCTCAGGC+TGG 0.577660 5_4:+69717527 None:intergenic
ATGGCTGGACTTGCACCCGA+GGG 0.585147 5_4:-69720508 Msa0867060:CDS
AACTCCGCGGCGTAGATCCG+GGG 0.585487 5_4:-69721273 Msa0867060:five_prime_UTR
ATTCTGGACTTCTTATGATG+AGG 0.585617 5_4:-69720305 Msa0867060:CDS
AGTTCTCAGGCTGGGTAGGG+AGG 0.588214 5_4:+69717536 None:intergenic
CAAGATGTTTGTGTTGGATG+AGG 0.589017 5_4:-69718814 Msa0867060:CDS
TTGGAGCTAAAACCAAGGCC+TGG 0.589196 5_4:+69719036 None:intergenic
TTTGTCACGAAGGAAGATGA+AGG 0.595012 5_4:-69717457 Msa0867060:CDS
TATGGCTGGACTTGCACCCG+AGG 0.596497 5_4:-69720509 Msa0867060:CDS
CCAACTAGCGTTGACTGAGA+GGG 0.600177 5_4:-69721415 Msa0867060:five_prime_UTR
GCTGATGAAATGCTTTCTCG+AGG 0.601323 5_4:-69718792 Msa0867060:CDS
GAGACATGGATCAAAATACC+AGG 0.602543 5_4:-69717669 Msa0867060:CDS
CTGCCAGGTAAGATTCAAGT+AGG 0.602744 5_4:-69717973 Msa0867060:CDS
GCTTGCTCAGCAGATTGAGA+AGG 0.608979 5_4:-69719006 Msa0867060:CDS
GGGGATAGTTCCCTTCTGCA+AGG 0.611798 5_4:-69719156 Msa0867060:CDS
GGGATAGTTCCCTTCTGCAA+GGG 0.612393 5_4:-69719155 Msa0867060:CDS
ATGGAGATAGTTCTCAGGCT+GGG 0.613686 5_4:+69717528 None:intergenic
ACATCAAGTCCCTTGCAGAA+GGG 0.620896 5_4:+69719146 None:intergenic
CAACTAGCGTTGACTGAGAG+GGG 0.630133 5_4:-69721414 Msa0867060:five_prime_UTR
TTTGTTAGAGAATCTCCTCA+GGG 0.631297 5_4:-69720257 Msa0867060:CDS
AAGGTGCATGCTTGTGTCGG+AGG 0.632831 5_4:-69718951 Msa0867060:CDS
ACTACCGATCTGTTGGCTCG+TGG 0.635749 5_4:-69717598 Msa0867060:CDS
TTCCACTACGACCAATACGA+TGG 0.638034 5_4:+69717509 None:intergenic
TAAGCTCATCACGCTTCACA+AGG 0.638139 5_4:+69717878 None:intergenic
TCAATGTTGAGAAAGAGGAG+TGG 0.638471 5_4:-69717828 Msa0867060:CDS
AGTTGTCTGAATATCGGGGT+AGG 0.638841 5_4:-69717210 Msa0867060:three_prime_UTR
GTGATCTCAAGTGCCTCAGG+AGG 0.642550 5_4:+69717931 None:intergenic
TGCCATTAACTTTGTCACGA+AGG 0.643459 5_4:-69717467 Msa0867060:CDS
GTTAAGGTGCATGCTTGTGT+CGG 0.644815 5_4:-69718954 Msa0867060:CDS
ACGAGTTGGAGCTAAAACCA+AGG 0.644823 5_4:+69719031 None:intergenic
TGGATTAAACCGAAAAGCGA+CGG 0.648057 5_4:+69721216 None:intergenic
AAACACGAGAAGACCCAGAA+CGG 0.652225 5_4:+69717626 None:intergenic
TTGAAGTTGTCTGAATATCG+GGG 0.659994 5_4:-69717214 Msa0867060:three_prime_UTR
CATACAGTCTCAGCTACTCA+CGG 0.666004 5_4:-69717691 Msa0867060:CDS
TACGATAAAACCAAGCAACA+GGG 0.666972 5_4:+69721344 None:intergenic
AATTTCCGACTAATATATGG+AGG 0.667446 5_4:+69717347 None:intergenic
CATCTGCTATTCAGCAAAGG+GGG 0.672902 5_4:-69719175 Msa0867060:CDS
AATACCACGAGCCAACAGAT+CGG 0.674449 5_4:+69717594 None:intergenic
TGGCTGGACTTGCACCCGAG+GGG 0.685827 5_4:-69720507 Msa0867060:CDS
CCATCTGCTATTCAGCAAAG+GGG 0.689569 5_4:-69719176 Msa0867060:CDS
CACCACTTGATAGAATACGT+TGG 0.711575 5_4:+69718910 None:intergenic
AGACATGGATCAAAATACCA+GGG 0.718305 5_4:-69717668 Msa0867060:CDS
CATATGCATAAATGCCCCTG+AGG 0.718966 5_4:+69720242 None:intergenic
AACTCCCCGGATCTACGCCG+CGG 0.720835 5_4:+69721269 None:intergenic
AATTGTGTGATGAGACGTAG+TGG 0.741003 5_4:-69717032 Msa0867060:three_prime_UTR
TTGTTAGAGAATCTCCTCAG+GGG 0.744236 5_4:-69720256 Msa0867060:CDS
AGTTTATGAACAAACCTGTG+AGG 0.746705 5_4:-69717903 Msa0867060:CDS
GAGTTGAGGGATGAAAACGA+AGG 0.764414 5_4:+69721291 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTTAAAAATTCAAAATATA+TGG - chr5_4:69719169-69719188 Msa0867060:CDS 10.0%
!! TAAAATAAGATAGAAATAGT+TGG + chr5_4:69717461-69717480 None:intergenic 15.0%
!!! AGTTACAACATTTTTTTTTT+TGG + chr5_4:69718911-69718930 None:intergenic 15.0%
!! TATGTTATAACTGTTATGTT+AGG - chr5_4:69717642-69717661 Msa0867060:CDS 20.0%
!! TAGTACATGAAAAAAATGAA+GGG + chr5_4:69718044-69718063 None:intergenic 20.0%
!!! TGTTTTAATGTAGGAATTTT+TGG - chr5_4:69718067-69718086 Msa0867060:intron 20.0%
!! TGAAATCATTATTACTAGTT+TGG - chr5_4:69718096-69718115 Msa0867060:intron 20.0%
!! TATATTGTTCTTAATGTCTT+TGG - chr5_4:69718278-69718297 Msa0867060:intron 20.0%
!! GAAAAAGAGACTTATAAAAA+GGG + chr5_4:69718350-69718369 None:intergenic 20.0%
!! TGAAAAAGAGACTTATAAAA+AGG + chr5_4:69718351-69718370 None:intergenic 20.0%
!! TCACATATATTGAGAAAAAT+TGG - chr5_4:69718375-69718394 Msa0867060:intron 20.0%
!!! TTTTTGAATTAAGACTACAA+GGG + chr5_4:69718673-69718692 None:intergenic 20.0%
!!! TTTTTTGAATTAAGACTACA+AGG + chr5_4:69718674-69718693 None:intergenic 20.0%
!!! TTGAATTTTTAAGAGTACAA+CGG + chr5_4:69719163-69719182 None:intergenic 20.0%
!! TACAACAATTATGAAATAGA+TGG + chr5_4:69719725-69719744 None:intergenic 20.0%
!!! TTAAGTGTTTTGTTTCTTTT+TGG - chr5_4:69719948-69719967 Msa0867060:intron 20.0%
!!! TAAGAATTTAACCTTTTTTC+TGG - chr5_4:69720378-69720397 Msa0867060:intron 20.0%
! TGAAAGTGAAATATGAAAGA+TGG + chr5_4:69717315-69717334 None:intergenic 25.0%
!!! TGTTTCATGTTTTAACTGTT+AGG - chr5_4:69717522-69717541 Msa0867060:CDS 25.0%
!!! TTTGTGTTGTTTTATACTGT+TGG - chr5_4:69717569-69717588 Msa0867060:CDS 25.0%
!!! TTGTGTTGTTTTATACTGTT+GGG - chr5_4:69717570-69717589 Msa0867060:CDS 25.0%
! TCTCACTTATGTAATTTAGT+CGG + chr5_4:69717698-69717717 None:intergenic 25.0%
! ATTACATAAGTGAGACAATT+TGG - chr5_4:69717703-69717722 Msa0867060:CDS 25.0%
! TTACATAAGTGAGACAATTT+GGG - chr5_4:69717704-69717723 Msa0867060:CDS 25.0%
! TTCAAGATAGCTTATGAAAA+TGG - chr5_4:69717770-69717789 Msa0867060:CDS 25.0%
! CTAGTACATGAAAAAAATGA+AGG + chr5_4:69718045-69718064 None:intergenic 25.0%
!!! GTACTAGTTTGTTTTAATGT+AGG - chr5_4:69718058-69718077 Msa0867060:intron 25.0%
!!! GTTTGGTTACCTTTTTTTTA+TGG - chr5_4:69718113-69718132 Msa0867060:intron 25.0%
! GAGAAAAAGCCATAAAAAAA+AGG + chr5_4:69718125-69718144 None:intergenic 25.0%
!!! TTATGATAGTTTTGATGCTA+TGG - chr5_4:69718194-69718213 Msa0867060:intron 25.0%
!!! TATGATAGTTTTGATGCTAT+GGG - chr5_4:69718195-69718214 Msa0867060:intron 25.0%
!! AGAGAATAACAATATTTTCC+AGG + chr5_4:69718316-69718335 None:intergenic 25.0%
!! AATATTGTTATTCTCTGTCA+TGG - chr5_4:69718320-69718339 Msa0867060:intron 25.0%
!!! CAGTTTGCTAAAAAAAATAG+TGG + chr5_4:69718848-69718867 None:intergenic 25.0%
! GTGCATAACTAATTAACTAT+TGG - chr5_4:69718945-69718964 Msa0867060:CDS 25.0%
! TTTGAAAGATGCCTTATATT+TGG - chr5_4:69719081-69719100 Msa0867060:CDS 25.0%
! TTGAAAGATGCCTTATATTT+GGG - chr5_4:69719082-69719101 Msa0867060:CDS 25.0%
! GACTAATTATAAGGACAATT+TGG + chr5_4:69719120-69719139 None:intergenic 25.0%
! ATTGTCCTTATAATTAGTCA+TGG - chr5_4:69719121-69719140 Msa0867060:CDS 25.0%
!!! TATTGTTTTTTTCTCTACGA+TGG - chr5_4:69719229-69719248 Msa0867060:intron 25.0%
!!! ATTGTTTTTTTCTCTACGAT+GGG - chr5_4:69719230-69719249 Msa0867060:intron 25.0%
! GTAATTGACAAAAGTGAAAA+AGG + chr5_4:69719750-69719769 None:intergenic 25.0%
! ACATAAAAAAACAACACAGA+AGG + chr5_4:69719776-69719795 None:intergenic 25.0%
! AAAAGTAAAAAGACAAGTGT+GGG + chr5_4:69719805-69719824 None:intergenic 25.0%
! ATGAAGCAGAAATAAGAAAA+TGG + chr5_4:69719908-69719927 None:intergenic 25.0%
!!! GTTTCTTTTTGGAATTTTGA+CGG - chr5_4:69719959-69719978 Msa0867060:intron 25.0%
!!! TTTCTTTTTGGAATTTTGAC+GGG - chr5_4:69719960-69719979 Msa0867060:intron 25.0%
! GAAACTAAAAAATGAATTCG+GGG + chr5_4:69720160-69720179 None:intergenic 25.0%
! GGAAACTAAAAAATGAATTC+GGG + chr5_4:69720161-69720180 None:intergenic 25.0%
! GGGAAACTAAAAAATGAATT+CGG + chr5_4:69720162-69720181 None:intergenic 25.0%
!! CAAAAGTAAAGTGTTTGTTT+GGG + chr5_4:69720298-69720317 None:intergenic 25.0%
! ACTAATTTCCGACTAATATA+TGG + chr5_4:69721134-69721153 None:intergenic 25.0%
! AGCAGAAATAAAACCAAAAA+GGG + chr5_4:69721196-69721215 None:intergenic 25.0%
! AAGCAGAAATAAAACCAAAA+AGG + chr5_4:69721197-69721216 None:intergenic 25.0%
!!! TTTTGAAGTTGTCTGAATAT+CGG - chr5_4:69721259-69721278 Msa0867060:five_prime_UTR 25.0%
! TGCATTGTTGAATTCATTAT+TGG - chr5_4:69721292-69721311 Msa0867060:five_prime_UTR 25.0%
! AAAGAGGACACTTGTTAAAA+TGG - chr5_4:69716975-69716994 Msa0867060:three_prime_UTR 30.0%
!! GACACTTGTTAAAATGGTTT+TGG - chr5_4:69716981-69717000 Msa0867060:three_prime_UTR 30.0%
!!! ACTTGTTAAAATGGTTTTGG+TGG - chr5_4:69716984-69717003 Msa0867060:three_prime_UTR 30.0%
AAATAGTTGGAAAAGCAAAG+AGG + chr5_4:69717448-69717467 None:intergenic 30.0%
!!! CATGTTTTAACTGTTAGGTT+AGG - chr5_4:69717527-69717546 Msa0867060:CDS 30.0%
!! TTGTTTTATACTGTTGGGTT+AGG - chr5_4:69717575-69717594 Msa0867060:CDS 30.0%
!! TGTTATGTTAGGTTAGCTTT+AGG - chr5_4:69717653-69717672 Msa0867060:CDS 30.0%
!! GTTATGTTAGGTTAGCTTTA+GGG - chr5_4:69717654-69717673 Msa0867060:CDS 30.0%
AAACAACTTATTTGCAGGAA+TGG + chr5_4:69717876-69717895 None:intergenic 30.0%
!! TTTTTATGGCTTTTTCTCTC+AGG - chr5_4:69718127-69718146 Msa0867060:intron 30.0%
! TATTTTCCAGGTGTAAGTAA+AGG + chr5_4:69718304-69718323 None:intergenic 30.0%
! TGTGGAAACATTTTATGTGT+TGG - chr5_4:69718426-69718445 Msa0867060:intron 30.0%
! GTGGAAACATTTTATGTGTT+GGG - chr5_4:69718427-69718446 Msa0867060:intron 30.0%
AGTGAATGATTGTTACCAAA+CGG + chr5_4:69718558-69718577 None:intergenic 30.0%
TTGGTTGAATTTGTAGTGTT+TGG + chr5_4:69718760-69718779 None:intergenic 30.0%
TGAAAGATGCCTTATATTTG+GGG - chr5_4:69719083-69719102 Msa0867060:CDS 30.0%
TCCTTATAATTAGTCATGGA+AGG - chr5_4:69719125-69719144 Msa0867060:CDS 30.0%
TCCTTCCATGACTAATTATA+AGG + chr5_4:69719129-69719148 None:intergenic 30.0%
! TAGACACTTTCTGTTTTCTT+TGG - chr5_4:69719206-69719225 Msa0867060:intron 30.0%
CAAACATCTTGATGTAATCT+GGG + chr5_4:69719652-69719671 None:intergenic 30.0%
ACAAACATCTTGATGTAATC+TGG + chr5_4:69719653-69719672 None:intergenic 30.0%
TTACATCAAGATGTTTGTGT+TGG - chr5_4:69719655-69719674 Msa0867060:intron 30.0%
GAAAAGTAAAAAGACAAGTG+TGG + chr5_4:69719806-69719825 None:intergenic 30.0%
TGAGAGTAGTATAACAAGAT+AGG - chr5_4:69720087-69720106 Msa0867060:intron 30.0%
!!! GAGGTTAATTTTTTCTCAAC+AGG + chr5_4:69720206-69720225 None:intergenic 30.0%
AAAAAATTAACCTCCATGCA+AGG - chr5_4:69720212-69720231 Msa0867060:intron 30.0%
! CCAAAAGTAAAGTGTTTGTT+TGG + chr5_4:69720299-69720318 None:intergenic 30.0%
! CCAAACAAACACTTTACTTT+TGG - chr5_4:69720296-69720315 Msa0867060:CDS 30.0%
AATATGACTACAGACCAATA+AGG + chr5_4:69720404-69720423 None:intergenic 30.0%
ATCTGATAACAAAAAAGCCA+AGG + chr5_4:69720463-69720482 None:intergenic 30.0%
TTATGTCAATGTTGAGAAAG+AGG - chr5_4:69720642-69720661 Msa0867060:intron 30.0%
TTTAATAACTACCGATCTGT+TGG - chr5_4:69720870-69720889 Msa0867060:intron 30.0%
CTAACACATTGTAAAACTTC+TGG + chr5_4:69721059-69721078 None:intergenic 30.0%
! GTTTTACAATGTGTTAGTTG+AGG - chr5_4:69721062-69721081 Msa0867060:intron 30.0%
TTTGTCCTCCATATATTAGT+CGG - chr5_4:69721123-69721142 Msa0867060:intron 30.0%
AATTTCCGACTAATATATGG+AGG + chr5_4:69721131-69721150 None:intergenic 30.0%
! TAGTCGGAAATTAGTACTTT+TGG - chr5_4:69721139-69721158 Msa0867060:intron 30.0%
AAATAAAACCAAAAAGGGGA+GGG + chr5_4:69721191-69721210 None:intergenic 30.0%
GCAGAAATAAAACCAAAAAG+GGG + chr5_4:69721195-69721214 None:intergenic 30.0%
! TTTGAAGTTGTCTGAATATC+GGG - chr5_4:69721260-69721279 Msa0867060:five_prime_UTR 30.0%
GAATTCATTATTGGCCAAAT+TGG - chr5_4:69721301-69721320 Msa0867060:five_prime_UTR 30.0%
!! CACTCTTACTTATTTCTAGA+AGG - chr5_4:69721335-69721354 Msa0867060:five_prime_UTR 30.0%
CATAATATCAACGAGTCTAA+TGG + chr5_4:69721469-69721488 None:intergenic 30.0%
!!! AAAATGGTTTTGGTGGAATG+AGG - chr5_4:69716991-69717010 Msa0867060:three_prime_UTR 35.0%
!!! AAATGGTTTTGGTGGAATGA+GGG - chr5_4:69716992-69717011 Msa0867060:three_prime_UTR 35.0%
TACGATAAAACCAAGCAACA+GGG + chr5_4:69717134-69717153 None:intergenic 35.0%
ATACGATAAAACCAAGCAAC+AGG + chr5_4:69717135-69717154 None:intergenic 35.0%
TTCGGTTTAATCCACTTTCA+AGG - chr5_4:69717268-69717287 Msa0867060:three_prime_UTR 35.0%
TGGCTAAACAACTTATTTGC+AGG + chr5_4:69717881-69717900 None:intergenic 35.0%
!! CTGTTTCTATCTTGCAGTTA+TGG - chr5_4:69717948-69717967 Msa0867060:CDS 35.0%
ATTCTGGACTTCTTATGATG+AGG - chr5_4:69718170-69718189 Msa0867060:intron 35.0%
TTTGTTAGAGAATCTCCTCA+GGG - chr5_4:69718218-69718237 Msa0867060:intron 35.0%
! ACATTTTATGTGTTGGGATG+TGG - chr5_4:69718433-69718452 Msa0867060:intron 35.0%
! CATTTTATGTGTTGGGATGT+GGG - chr5_4:69718434-69718453 Msa0867060:intron 35.0%
GTGAATGATTGTTACCAAAC+GGG + chr5_4:69718557-69718576 None:intergenic 35.0%
CTTGTAAGGTAGCTAGTTAA+CGG + chr5_4:69718795-69718814 None:intergenic 35.0%
AACAAAACACACATGCACTA+AGG + chr5_4:69718873-69718892 None:intergenic 35.0%
GGAAGAAGAAAAGTCAATGT+TGG + chr5_4:69718996-69719015 None:intergenic 35.0%
!! TTGATGCTACTGATTTGTCT+TGG + chr5_4:69719017-69719036 None:intergenic 35.0%
GAAAGATGCCTTATATTTGG+GGG - chr5_4:69719084-69719103 Msa0867060:CDS 35.0%
!! AAAAAGTGCCCCCAAATATA+AGG + chr5_4:69719095-69719114 None:intergenic 35.0%
ACACTTAACAGAGCTGAAAA+TGG + chr5_4:69719936-69719955 None:intergenic 35.0%
GAGTAGTATAACAAGATAGG+AGG - chr5_4:69720090-69720109 Msa0867060:intron 35.0%
ATAACAAGATAGGAGGATCT+AGG - chr5_4:69720097-69720116 Msa0867060:intron 35.0%
TAACAAGATAGGAGGATCTA+GGG - chr5_4:69720098-69720117 Msa0867060:intron 35.0%
AGGAATTCGGATAATTATGG+AGG + chr5_4:69720137-69720156 None:intergenic 35.0%
ACTAAAAAATGAATTCGGGG+AGG + chr5_4:69720157-69720176 None:intergenic 35.0%
!!! TTTTTAGTTTCCCCAACTTG+TGG - chr5_4:69720169-69720188 Msa0867060:intron 35.0%
!!! TTTTAGTTTCCCCAACTTGT+GGG - chr5_4:69720170-69720189 Msa0867060:intron 35.0%
! AAGTAAAGTGTTTGTTTGGG+AGG + chr5_4:69720295-69720314 None:intergenic 35.0%
!!! AACCTTTTTTCTGGCCTTAT+TGG - chr5_4:69720387-69720406 Msa0867060:intron 35.0%
TGATAACAAAAAAGCCAAGG+AGG + chr5_4:69720460-69720479 None:intergenic 35.0%
AGTTTATGAACAAACCTGTG+AGG - chr5_4:69720572-69720591 Msa0867060:intron 35.0%
AAACTGCTTAATACCCTCTA+AGG + chr5_4:69720623-69720642 None:intergenic 35.0%
AAAAATGACACTCTGAGTGA+TGG + chr5_4:69720710-69720729 None:intergenic 35.0%
AGACATGGATCAAAATACCA+GGG - chr5_4:69720807-69720826 Msa0867060:intron 35.0%
TTATAACCAGAGACACTTGT+TGG + chr5_4:69720912-69720931 None:intergenic 35.0%
TTCCTTCGTGACAAAGTTAA+TGG + chr5_4:69721013-69721032 None:intergenic 35.0%
GAAATAAAACCAAAAAGGGG+AGG + chr5_4:69721192-69721211 None:intergenic 35.0%
! CTTTGTCTGTTTGATAGTCT+TGG - chr5_4:69721222-69721241 Msa0867060:five_prime_UTR 35.0%
TTGAAGTTGTCTGAATATCG+GGG - chr5_4:69721261-69721280 Msa0867060:five_prime_UTR 35.0%
! TTTTGGTGGAATGAGGGAAA+CGG - chr5_4:69716998-69717017 Msa0867060:three_prime_UTR 40.0%
TTGACTGAGAGGGGTAAATT+AGG - chr5_4:69717070-69717089 Msa0867060:three_prime_UTR 40.0%
AAGCAACAGGGTAAGGTAAA+GGG + chr5_4:69717122-69717141 None:intergenic 40.0%
TAAAACCAAGCAACAGGGTA+AGG + chr5_4:69717129-69717148 None:intergenic 40.0%
GGAGTTAGTTAACGGAGTTA+GGG + chr5_4:69717241-69717260 None:intergenic 40.0%
AAAGCGACGGAGTTAGTTAA+CGG + chr5_4:69717249-69717268 None:intergenic 40.0%
!!! TAACTAACTCCGTCGCTTTT+CGG - chr5_4:69717250-69717269 Msa0867060:three_prime_UTR 40.0%
TGGATTAAACCGAAAAGCGA+CGG + chr5_4:69717262-69717281 None:intergenic 40.0%
ATAGCGAGATACCTTGAAAG+TGG + chr5_4:69717282-69717301 None:intergenic 40.0%
TTTCACTTTCATCGCGACAA+TGG - chr5_4:69717324-69717343 Msa0867060:three_prime_UTR 40.0%
AGACAATTTGGGCAAACGTA+TGG - chr5_4:69717715-69717734 Msa0867060:CDS 40.0%
TTCTATCTTGCAGTTATGGC+TGG - chr5_4:69717952-69717971 Msa0867060:CDS 40.0%
! GTTTGTTAGAGAATCTCCTC+AGG - chr5_4:69718217-69718236 Msa0867060:intron 40.0%
TTGTTAGAGAATCTCCTCAG+GGG - chr5_4:69718219-69718238 Msa0867060:intron 40.0%
!! TGGTAGAAGTGTTCCTTAGA+CGG - chr5_4:69718395-69718414 Msa0867060:intron 40.0%
AGTGTTCCTTAGACGGTAAA+AGG - chr5_4:69718402-69718421 Msa0867060:intron 40.0%
ATGACGAAAAATGACCCGTT+TGG - chr5_4:69718540-69718559 Msa0867060:intron 40.0%
! CTAATAGCGGAAGACTTGTA+AGG + chr5_4:69718809-69718828 None:intergenic 40.0%
GCTGTTAAGCTAGCTAATAG+CGG + chr5_4:69718822-69718841 None:intergenic 40.0%
ACTAGTATGACTCGTGCTTT+AGG - chr5_4:69719266-69719285 Msa0867060:intron 40.0%
GGGACTTGATGTTATTCAAC+AGG - chr5_4:69719340-69719359 Msa0867060:intron 40.0%
AAAACAGCAACTTTCTGCTC+TGG - chr5_4:69719380-69719399 Msa0867060:intron 40.0%
! TCACATTGTAGTCAAGTTGC+TGG + chr5_4:69719412-69719431 None:intergenic 40.0%
TGGAGACTATCTAGGTGTTA+AGG - chr5_4:69719505-69719524 Msa0867060:intron 40.0%
GACCAACGTATTCTATCAAG+TGG - chr5_4:69719563-69719582 Msa0867060:intron 40.0%
CACCACTTGATAGAATACGT+TGG + chr5_4:69719568-69719587 None:intergenic 40.0%
ATCAAGTGGTGTTCATGTTG+TGG - chr5_4:69719577-69719596 Msa0867060:intron 40.0%
CAAGATGTTTGTGTTGGATG+AGG - chr5_4:69719661-69719680 Msa0867060:intron 40.0%
TTCTCGAGGTTTCAAAGATC+AGG - chr5_4:69719697-69719716 Msa0867060:intron 40.0%
!!! GGCTCACCTATTTTTGGATT+GGG - chr5_4:69720009-69720028 Msa0867060:intron 40.0%
CACACTCCCAATCCAAAAAT+AGG + chr5_4:69720018-69720037 None:intergenic 40.0%
!! TTGGATTGGGAGTGTGTTTT+TGG - chr5_4:69720022-69720041 Msa0867060:intron 40.0%
AACAAGATAGGAGGATCTAG+GGG - chr5_4:69720099-69720118 Msa0867060:intron 40.0%
GGGAGGAATTCGGATAATTA+TGG + chr5_4:69720140-69720159 None:intergenic 40.0%
AATGAATTCGGGGAGGAATT+CGG + chr5_4:69720150-69720169 None:intergenic 40.0%
! TTTAGTTTCCCCAACTTGTG+GGG - chr5_4:69720171-69720190 Msa0867060:intron 40.0%
AAATTAACCTCCATGCAAGG+TGG - chr5_4:69720215-69720234 Msa0867060:intron 40.0%
AATTAACCTCCATGCAAGGT+GGG - chr5_4:69720216-69720235 Msa0867060:intron 40.0%
AAAGAGGAAGAGAAGGGAAA+TGG + chr5_4:69720257-69720276 None:intergenic 40.0%
GACCAATAAGGCCAGAAAAA+AGG + chr5_4:69720392-69720411 None:intergenic 40.0%
AAAAGCCAAGGAGGTTAAAG+CGG + chr5_4:69720451-69720470 None:intergenic 40.0%
ACTCCTACTTGAATCTTACC+TGG + chr5_4:69720508-69720527 None:intergenic 40.0%
TCAATGTTGAGAAAGAGGAG+TGG - chr5_4:69720647-69720666 Msa0867060:intron 40.0%
!!! GTGTCATTTTTGTGAACACC+AGG - chr5_4:69720719-69720738 Msa0867060:intron 40.0%
!! TCATTTTTGTGAACACCAGG+AGG - chr5_4:69720722-69720741 Msa0867060:intron 40.0%
GAGACATGGATCAAAATACC+AGG - chr5_4:69720806-69720825 Msa0867060:intron 40.0%
TTCACGCATAATAATGTCCC+TGG + chr5_4:69720827-69720846 None:intergenic 40.0%
ATTATGCGTGAATTCCGTTC+TGG - chr5_4:69720835-69720854 Msa0867060:intron 40.0%
TTATGCGTGAATTCCGTTCT+GGG - chr5_4:69720836-69720855 Msa0867060:intron 40.0%
ATACGATGGAGATAGTTCTC+AGG + chr5_4:69720955-69720974 None:intergenic 40.0%
GAGAACTATCTCCATCGTAT+TGG - chr5_4:69720955-69720974 Msa0867060:intron 40.0%
! AGTGGAAGGTTTGGTAGAAA+AGG - chr5_4:69720982-69721001 Msa0867060:intron 40.0%
TGCCATTAACTTTGTCACGA+AGG - chr5_4:69721008-69721027 Msa0867060:intron 40.0%
TTTGTCACGAAGGAAGATGA+AGG - chr5_4:69721018-69721037 Msa0867060:intron 40.0%
AGAAGCTCAGCAACATTTGA+TGG + chr5_4:69721093-69721112 None:intergenic 40.0%
GTGAGTGTCTAACACCAATT+TGG + chr5_4:69721318-69721337 None:intergenic 40.0%
AATTGTGTGATGAGACGTAG+TGG - chr5_4:69721443-69721462 Msa0867060:five_prime_UTR 40.0%
TGGAATGAGGGAAACGGAAA+AGG - chr5_4:69717004-69717023 Msa0867060:three_prime_UTR 45.0%
CGCTAGTTGGTCAAACTAAC+TGG + chr5_4:69717050-69717069 None:intergenic 45.0%
CAAGCAACAGGGTAAGGTAA+AGG + chr5_4:69717123-69717142 None:intergenic 45.0%
CTTTACCTTACCCTGTTGCT+TGG - chr5_4:69717121-69717140 Msa0867060:three_prime_UTR 45.0%
GAGTTGAGGGATGAAAACGA+AGG + chr5_4:69717187-69717206 None:intergenic 45.0%
CGGAGTTAGTTAACGGAGTT+AGG + chr5_4:69717242-69717261 None:intergenic 45.0%
AGCACGAGTAAGGAGTTGTT+TGG + chr5_4:69717901-69717920 None:intergenic 45.0%
CAACAAGATCAGCACGAGTA+AGG + chr5_4:69717911-69717930 None:intergenic 45.0%
CAGCTGATGGAGATGAATTC+TGG - chr5_4:69718154-69718173 Msa0867060:intron 45.0%
CATATGCATAAATGCCCCTG+AGG + chr5_4:69718236-69718255 None:intergenic 45.0%
!! CTCAGGGGCATTTATGCATA+TGG - chr5_4:69718234-69718253 Msa0867060:intron 45.0%
! CTTTGGCCTTTACTTACACC+TGG - chr5_4:69718295-69718314 Msa0867060:intron 45.0%
! CCACAACCTTTTACCGTCTA+AGG + chr5_4:69718411-69718430 None:intergenic 45.0%
CCTTAGACGGTAAAAGGTTG+TGG - chr5_4:69718408-69718427 Msa0867060:intron 45.0%
TACCCCAATTCTCTGCACTT+AGG - chr5_4:69718470-69718489 Msa0867060:intron 45.0%
ACCCCAATTCTCTGCACTTA+GGG - chr5_4:69718471-69718490 Msa0867060:intron 45.0%
ACCCTAAGTGCAGAGAATTG+GGG + chr5_4:69718475-69718494 None:intergenic 45.0%
GACCCTAAGTGCAGAGAATT+GGG + chr5_4:69718476-69718495 None:intergenic 45.0%
AGACCCTAAGTGCAGAGAAT+TGG + chr5_4:69718477-69718496 None:intergenic 45.0%
GTAAGGTAGCTAGTTAACGG+CGG + chr5_4:69718792-69718811 None:intergenic 45.0%
AGCCATCTGCTATTCAGCAA+AGG - chr5_4:69719297-69719316 Msa0867060:intron 45.0%
GCCATCTGCTATTCAGCAAA+GGG - chr5_4:69719298-69719317 Msa0867060:intron 45.0%
CCATCTGCTATTCAGCAAAG+GGG - chr5_4:69719299-69719318 Msa0867060:intron 45.0%
CATCTGCTATTCAGCAAAGG+GGG - chr5_4:69719300-69719319 Msa0867060:intron 45.0%
ACATCAAGTCCCTTGCAGAA+GGG + chr5_4:69719332-69719351 None:intergenic 45.0%
AACATCAAGTCCCTTGCAGA+AGG + chr5_4:69719333-69719352 None:intergenic 45.0%
GTTATTCAACAGGCTCAGTC+TGG - chr5_4:69719350-69719369 Msa0867060:intron 45.0%
!!! GCAGAAAGTTGCTGTTTTCC+CGG + chr5_4:69719378-69719397 None:intergenic 45.0%
! ACGAGTTGGAGCTAAAACCA+AGG + chr5_4:69719447-69719466 None:intergenic 45.0%
GTTAAGGTGCATGCTTGTGT+CGG - chr5_4:69719521-69719540 Msa0867060:intron 45.0%
AGTGGTGTTCATGTTGTGGT+TGG - chr5_4:69719581-69719600 Msa0867060:intron 45.0%
AGCATATCAAACACACGACC+AGG + chr5_4:69719611-69719630 None:intergenic 45.0%
GCTGATGAAATGCTTTCTCG+AGG - chr5_4:69719683-69719702 Msa0867060:intron 45.0%
!!! GGGCTCACCTATTTTTGGAT+TGG - chr5_4:69720008-69720027 Msa0867060:intron 45.0%
!!! GATTGGGAGTGTGTTTTTGG+AGG - chr5_4:69720025-69720044 Msa0867060:intron 45.0%
ATTAACCTCCATGCAAGGTG+GGG - chr5_4:69720217-69720236 Msa0867060:intron 45.0%
TGTTTGGGAGGCAGATGTTT+GGG + chr5_4:69720283-69720302 None:intergenic 45.0%
TTGTTTGGGAGGCAGATGTT+TGG + chr5_4:69720284-69720303 None:intergenic 45.0%
GTAAACCGCTTTAACCTCCT+TGG - chr5_4:69720443-69720462 Msa0867060:intron 45.0%
CTGCCAGGTAAGATTCAAGT+AGG - chr5_4:69720502-69720521 Msa0867060:CDS 45.0%
TAAGCTCATCACGCTTCACA+AGG + chr5_4:69720600-69720619 None:intergenic 45.0%
CGTGATGAGCTTACCTTAGA+GGG - chr5_4:69720607-69720626 Msa0867060:intron 45.0%
! ACACCAGGAGGAAAGTTGAT+TGG - chr5_4:69720734-69720753 Msa0867060:intron 45.0%
CAACCAATCAACTTTCCTCC+TGG + chr5_4:69720740-69720759 None:intergenic 45.0%
TAGCTGAGACTGTATGGTCT+CGG + chr5_4:69720780-69720799 None:intergenic 45.0%
CATACAGTCTCAGCTACTCA+CGG - chr5_4:69720784-69720803 Msa0867060:intron 45.0%
AAACACGAGAAGACCCAGAA+CGG + chr5_4:69720852-69720871 None:intergenic 45.0%
AATACCACGAGCCAACAGAT+CGG + chr5_4:69720884-69720903 None:intergenic 45.0%
TGATGTCCAACAAGTGTCTC+TGG - chr5_4:69720903-69720922 Msa0867060:intron 45.0%
ATGGAGATAGTTCTCAGGCT+GGG + chr5_4:69720950-69720969 None:intergenic 45.0%
TTCCACTACGACCAATACGA+TGG + chr5_4:69720969-69720988 None:intergenic 45.0%
! ATCGTATTGGTCGTAGTGGA+AGG - chr5_4:69720968-69720987 Msa0867060:intron 45.0%
! ATTGGTCGTAGTGGAAGGTT+TGG - chr5_4:69720973-69720992 Msa0867060:intron 45.0%
! ACTTTACACCCTCCCCTTTT+TGG - chr5_4:69721180-69721199 Msa0867060:intron 45.0%
AGTTGTCTGAATATCGGGGT+AGG - chr5_4:69721265-69721284 Msa0867060:five_prime_UTR 45.0%
!! ACCAACTAGCGTTGACTGAG+AGG - chr5_4:69717059-69717078 Msa0867060:three_prime_UTR 50.0%
!! CCAACTAGCGTTGACTGAGA+GGG - chr5_4:69717060-69717079 Msa0867060:three_prime_UTR 50.0%
!! CAACTAGCGTTGACTGAGAG+GGG - chr5_4:69717061-69717080 Msa0867060:three_prime_UTR 50.0%
! GTTTTCATCCCTCAACTCCG+CGG - chr5_4:69717189-69717208 Msa0867060:three_prime_UTR 50.0%
! CGTAGATCCGGGGAGTTTTT+GGG - chr5_4:69717212-69717231 Msa0867060:three_prime_UTR 50.0%
AGGGTTTCCCAAAAACTCCC+CGG + chr5_4:69717222-69717241 None:intergenic 50.0%
! AGCATCGAATTGTGACCCCT+CGG + chr5_4:69717986-69718005 None:intergenic 50.0%
AGGGGTCACAATTCGATGCT+GGG - chr5_4:69717986-69718005 Msa0867060:CDS 50.0%
TCTCTCAGGATTGCAGCTGA+TGG - chr5_4:69718141-69718160 Msa0867060:intron 50.0%
!! GCAGAGAATTGGGGTATTGC+AGG + chr5_4:69718466-69718485 None:intergenic 50.0%
CTCTGCACTTAGGGTCTGTT+TGG - chr5_4:69718480-69718499 Msa0867060:intron 50.0%
TTAACGGCGGATACGCTAGT+TGG + chr5_4:69718779-69718798 None:intergenic 50.0%
CCCCTTTGCTGAATAGCAGA+TGG + chr5_4:69719302-69719321 None:intergenic 50.0%
GGGATAGTTCCCTTCTGCAA+GGG - chr5_4:69719320-69719339 Msa0867060:intron 50.0%
CTACAATGTGACTCAGTGCC+AGG - chr5_4:69719421-69719440 Msa0867060:intron 50.0%
TTGGAGCTAAAACCAAGGCC+TGG + chr5_4:69719442-69719461 None:intergenic 50.0%
GCTTGCTCAGCAGATTGAGA+AGG - chr5_4:69719469-69719488 Msa0867060:intron 50.0%
! CATGTTGTGGTTGGTACTCC+TGG - chr5_4:69719590-69719609 Msa0867060:intron 50.0%
! TTTTGACGGGAAGAGCGAAG+AGG - chr5_4:69719973-69719992 Msa0867060:intron 50.0%
TTTGACGGGAAGAGCGAAGA+GGG - chr5_4:69719974-69719993 Msa0867060:intron 50.0%
!!! TGGGAGTGTGTTTTTGGAGG+AGG - chr5_4:69720028-69720047 Msa0867060:intron 50.0%
!!! GGGAGTGTGTTTTTGGAGGA+GGG - chr5_4:69720029-69720048 Msa0867060:intron 50.0%
!!! GGAGTGTGTTTTTGGAGGAG+GGG - chr5_4:69720030-69720049 Msa0867060:intron 50.0%
!!! GAGTGTGTTTTTGGAGGAGG+GGG - chr5_4:69720031-69720050 Msa0867060:intron 50.0%
!!! AGTGTGTTTTTGGAGGAGGG+GGG - chr5_4:69720032-69720051 Msa0867060:intron 50.0%
ACCGAAACTCCCCACAAGTT+GGG + chr5_4:69720183-69720202 None:intergenic 50.0%
TTAACCTCCATGCAAGGTGG+GGG - chr5_4:69720218-69720237 Msa0867060:intron 50.0%
GGGGGAAAAGAGGAAGAGAA+GGG + chr5_4:69720263-69720282 None:intergenic 50.0%
TGGGGGAAAAGAGGAAGAGA+AGG + chr5_4:69720264-69720283 None:intergenic 50.0%
GCAGATGTTTGGGGGAAAAG+AGG + chr5_4:69720273-69720292 None:intergenic 50.0%
TTTGGGAGGCAGATGTTTGG+GGG + chr5_4:69720281-69720300 None:intergenic 50.0%
GTTTGGGAGGCAGATGTTTG+GGG + chr5_4:69720282-69720301 None:intergenic 50.0%
GATATCTTTCAGCTGCTGCC+AGG - chr5_4:69720487-69720506 Msa0867060:CDS 50.0%
CTTGTGATCTCAAGTGCCTC+AGG + chr5_4:69720550-69720569 None:intergenic 50.0%
! CTGAGGCACTTGAGATCACA+AGG - chr5_4:69720548-69720567 Msa0867060:intron 50.0%
GCGTGATGAGCTTACCTTAG+AGG - chr5_4:69720606-69720625 Msa0867060:intron 50.0%
TGAGAAAGAGGAGTGGAAGC+TGG - chr5_4:69720654-69720673 Msa0867060:intron 50.0%
CGTGAGTAGCTGAGACTGTA+TGG + chr5_4:69720786-69720805 None:intergenic 50.0%
GATAGTTCTCAGGCTGGGTA+GGG + chr5_4:69720945-69720964 None:intergenic 50.0%
AGATAGTTCTCAGGCTGGGT+AGG + chr5_4:69720946-69720965 None:intergenic 50.0%
GATGGAGATAGTTCTCAGGC+TGG + chr5_4:69720951-69720970 None:intergenic 50.0%
! CTCCATCGTATTGGTCGTAG+TGG - chr5_4:69720964-69720983 Msa0867060:intron 50.0%
CCCTCTCAGTCAACGCTAGT+TGG + chr5_4:69717063-69717082 None:intergenic 55.0%
! GCGTAGATCCGGGGAGTTTT+TGG - chr5_4:69717211-69717230 Msa0867060:three_prime_UTR 55.0%
GCATCGAATTGTGACCCCTC+GGG + chr5_4:69717985-69718004 None:intergenic 55.0%
GAGGGGTCACAATTCGATGC+TGG - chr5_4:69717985-69718004 Msa0867060:CDS 55.0%
GGGGATAGTTCCCTTCTGCA+AGG - chr5_4:69719319-69719338 Msa0867060:intron 55.0%
! CAACAGGCTCAGTCTGGAAC+CGG - chr5_4:69719356-69719375 Msa0867060:intron 55.0%
! AACAGGCTCAGTCTGGAACC+GGG - chr5_4:69719357-69719376 Msa0867060:intron 55.0%
TGCTGAGCAAGCTCACGAGT+TGG + chr5_4:69719461-69719480 None:intergenic 55.0%
GAGAAGGTTATGCGTGCGCT+TGG - chr5_4:69719485-69719504 Msa0867060:intron 55.0%
CGTGCGCTTGGAGACTATCT+AGG - chr5_4:69719497-69719516 Msa0867060:intron 55.0%
AAGGTGCATGCTTGTGTCGG+AGG - chr5_4:69719524-69719543 Msa0867060:intron 55.0%
! AAGAGCGAAGAGGGCATGGA+GGG - chr5_4:69719983-69720002 Msa0867060:intron 55.0%
CCGAAACTCCCCACAAGTTG+GGG + chr5_4:69720182-69720201 None:intergenic 55.0%
CCCCAACTTGTGGGGAGTTT+CGG - chr5_4:69720179-69720198 Msa0867060:intron 55.0%
GACCGAAACTCCCCACAAGT+TGG + chr5_4:69720184-69720203 None:intergenic 55.0%
CTCTGCTACAATGCCTCCTG+AGG - chr5_4:69720531-69720550 Msa0867060:intron 55.0%
GTGATCTCAAGTGCCTCAGG+AGG + chr5_4:69720547-69720566 None:intergenic 55.0%
CGCTTCACAAGGATCCTCAC+AGG + chr5_4:69720589-69720608 None:intergenic 55.0%
CTCAGCTACTCACGGAGACA+TGG - chr5_4:69720792-69720811 Msa0867060:intron 55.0%
!! ACTACCGATCTGTTGGCTCG+TGG - chr5_4:69720877-69720896 Msa0867060:intron 55.0%
GATCTACGCCGCGGAGTTGA+GGG + chr5_4:69717200-69717219 None:intergenic 60.0%
TCAACTCCGCGGCGTAGATC+CGG - chr5_4:69717200-69717219 Msa0867060:three_prime_UTR 60.0%
TATGGCTGGACTTGCACCCG+AGG - chr5_4:69717966-69717985 Msa0867060:CDS 60.0%
ATGGCTGGACTTGCACCCGA+GGG - chr5_4:69717967-69717986 Msa0867060:CDS 60.0%
TGTGACTCAGTGCCAGGCCT+TGG - chr5_4:69719427-69719446 Msa0867060:intron 60.0%
! GAAGAGCGAAGAGGGCATGG+AGG - chr5_4:69719982-69720001 Msa0867060:intron 60.0%
! AGAGCGAAGAGGGCATGGAG+GGG - chr5_4:69719984-69720003 Msa0867060:intron 60.0%
! GGGGGGGGCTCACCTATTTT+TGG - chr5_4:69720003-69720022 Msa0867060:intron 60.0%
AGTTCTCAGGCTGGGTAGGG+AGG + chr5_4:69720942-69720961 None:intergenic 60.0%
GGATCTACGCCGCGGAGTTG+AGG + chr5_4:69717201-69717220 None:intergenic 65.0%
CAACTCCGCGGCGTAGATCC+GGG - chr5_4:69717201-69717220 Msa0867060:three_prime_UTR 65.0%
AACTCCGCGGCGTAGATCCG+GGG - chr5_4:69717202-69717221 Msa0867060:three_prime_UTR 65.0%
AACTCCCCGGATCTACGCCG+CGG + chr5_4:69717209-69717228 None:intergenic 65.0%
TGGCTGGACTTGCACCCGAG+GGG - chr5_4:69717968-69717987 Msa0867060:CDS 65.0%
CGGGAAGAGCGAAGAGGGCA+TGG - chr5_4:69719979-69719998 Msa0867060:intron 65.0%
! GAGCGAAGAGGGCATGGAGG+GGG - chr5_4:69719985-69720004 Msa0867060:intron 65.0%
! AGCGAAGAGGGCATGGAGGG+GGG - chr5_4:69719986-69720005 Msa0867060:intron 65.0%
ACCTCCATGCAAGGTGGGGG+TGG - chr5_4:69720221-69720240 Msa0867060:intron 65.0%
CCTCCATGCAAGGTGGGGGT+GGG - chr5_4:69720222-69720241 Msa0867060:intron 65.0%
ACTCCCACCCCCACCTTGCA+TGG + chr5_4:69720228-69720247 None:intergenic 65.0%
! GCGAAGAGGGCATGGAGGGG+GGG - chr5_4:69719987-69720006 Msa0867060:intron 70.0%
! CGAAGAGGGCATGGAGGGGG+GGG - chr5_4:69719988-69720007 Msa0867060:intron 70.0%
CCCACCCCCACCTTGCATGG+AGG + chr5_4:69720225-69720244 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 69716966 69721531 69716966 ID=Msa0867060;Name=Msa0867060
chr5_4 mRNA 69716966 69721531 69716966 ID=Msa0867060-mRNA-1;Parent=Msa0867060;Name=Msa0867060-mRNA-1;_AED=0.12;_eAED=0.12;_QI=326|1|1|1|0.75|0.6|5|415|413
chr5_4 exon 69716966 69718016 69716966 ID=Msa0867060-mRNA-1:exon:21887;Parent=Msa0867060-mRNA-1
chr5_4 exon 69718779 69719209 69718779 ID=Msa0867060-mRNA-1:exon:21886;Parent=Msa0867060-mRNA-1
chr5_4 exon 69720242 69720348 69720242 ID=Msa0867060-mRNA-1:exon:21885;Parent=Msa0867060-mRNA-1
chr5_4 exon 69720463 69720532 69720463 ID=Msa0867060-mRNA-1:exon:21884;Parent=Msa0867060-mRNA-1
chr5_4 exon 69721208 69721531 69721208 ID=Msa0867060-mRNA-1:exon:21883;Parent=Msa0867060-mRNA-1
chr5_4 five_prime_UTR 69721208 69721531 69721208 ID=Msa0867060-mRNA-1:five_prime_utr;Parent=Msa0867060-mRNA-1
chr5_4 five_prime_UTR 69720531 69720532 69720531 ID=Msa0867060-mRNA-1:five_prime_utr;Parent=Msa0867060-mRNA-1
chr5_4 CDS 69720463 69720530 69720463 ID=Msa0867060-mRNA-1:cds;Parent=Msa0867060-mRNA-1
chr5_4 CDS 69720242 69720348 69720242 ID=Msa0867060-mRNA-1:cds;Parent=Msa0867060-mRNA-1
chr5_4 CDS 69718779 69719209 69718779 ID=Msa0867060-mRNA-1:cds;Parent=Msa0867060-mRNA-1
chr5_4 CDS 69717381 69718016 69717381 ID=Msa0867060-mRNA-1:cds;Parent=Msa0867060-mRNA-1
chr5_4 three_prime_UTR 69716966 69717380 69716966 ID=Msa0867060-mRNA-1:three_prime_utr;Parent=Msa0867060-mRNA-1
Gene Sequence

>Msa0867060

ATGGCTGGACTTGCACCCGAGGGGTCACAATTCGATGCTGGGAAATTTGATCAAAAAATGAATGACTTGATTGCAGCTGATGGAGATGAATTCTGGACTTCTTATGATGAGGTTTATGATAGTTTTGATGCTATGGGTTTGTTAGAGAATCTCCTCAGGGGCATTTATGCATATGGTTTTGAAAAGCCATCTGCTATTCAGCAAAGGGGGATAGTTCCCTTCTGCAAGGGACTTGATGTTATTCAACAGGCTCAGTCTGGAACCGGGAAAACAGCAACTTTCTGCTCTGGTGTTCTCCAGCAACTTGACTACAATGTGACTCAGTGCCAGGCCTTGGTTTTAGCTCCAACTCGTGAGCTTGCTCAGCAGATTGAGAAGGTTATGCGTGCGCTTGGAGACTATCTAGGTGTTAAGGTGCATGCTTGTGTCGGAGGTACAAGTGTTCGTGAAGACCAACGTATTCTATCAAGTGGTGTTCATGTTGTGGTTGGTACTCCTGGTCGTGTGTTTGATATGCTGCGCAGACAGTCTCTTCACCCAGATTACATCAAGATGTTTGTGTTGGATGAGGCTGATGAAATGCTTTCTCGAGGTTTCAAAGATCAGATCTATGATATCTTTCAGCTGCTGCCAGGTAAGATTCAAGTAGGAGTTTTCTCTGCTACAATGCCTCCTGAGGCACTTGAGATCACAAGGAAGTTTATGAACAAACCTGTGAGGATCCTTGTGAAGCGTGATGAGCTTACCTTAGAGGGTATTAAGCAGTTTTATGTCAATGTTGAGAAAGAGGAGTGGAAGCTGGACACACTCTGTGATCTTTATGAGACATTAGCCATCACTCAGAGTGTCATTTTTGTGAACACCAGGAGGAAAGTTGATTGGTTGACTGACAAAATGCGAAGCCGAGACCATACAGTCTCAGCTACTCACGGAGACATGGATCAAAATACCAGGGACATTATTATGCGTGAATTCCGTTCTGGGTCTTCTCGTGTTTTAATAACTACCGATCTGTTGGCTCGTGGTATTGATGTCCAACAAGTGTCTCTGGTTATAAATTTTGACCTCCCTACCCAGCCTGAGAACTATCTCCATCGTATTGGTCGTAGTGGAAGGTTTGGTAGAAAAGGTGTTGCCATTAACTTTGTCACGAAGGAAGATGAAGGAATGCTACGAGATATCCAGAAGTTTTACAATGTGTTAGTTGAGGAGCTGCCATCAAATGTTGCTGAGCTTCTCTGA
Protein sequence

>Msa0867060

MAGLAPEGSQFDAGKFDQKMNDLIAADGDEFWTSYDEVYDSFDAMGLLENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYNVTQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLHPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKEDEGMLRDIQKFYNVLVEELPSNVAELL*