Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410440 | sp|Q40468|IF415_TOBAC | 92.494 | 413 | 31 | 0 | 1 | 413 | 1 | 413 | 0.0 | 792 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410440 | A0A072V2Y5 | 99.516 | 413 | 2 | 0 | 1 | 413 | 1 | 413 | 0.0 | 850 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002790 | Msa1410440 | 0.803624 | 3.189433e-49 | -8.615850e-47 |
| Msa0003780 | Msa1410440 | 0.812010 | 5.257518e-51 | -8.615850e-47 |
| Msa0022970 | Msa1410440 | 0.804775 | 1.836958e-49 | -8.615850e-47 |
| Msa0032780 | Msa1410440 | 0.820900 | 5.371202e-53 | -8.615850e-47 |
| Msa0045730 | Msa1410440 | 0.876023 | 1.941154e-68 | -8.615850e-47 |
| Msa0046830 | Msa1410440 | 0.810560 | 1.084775e-50 | -8.615850e-47 |
| Msa0048180 | Msa1410440 | 0.811774 | 5.916592e-51 | -8.615850e-47 |
| Msa0074030 | Msa1410440 | 0.802818 | 4.683294e-49 | -8.615850e-47 |
| Msa0097580 | Msa1410440 | 0.824856 | 6.433558e-54 | -8.615850e-47 |
| Msa0116130 | Msa1410440 | 0.885946 | 5.241868e-72 | -8.615850e-47 |
| Msa0116670 | Msa1410440 | 0.832143 | 1.118147e-55 | -8.615850e-47 |
| Msa0118710 | Msa1410440 | 0.812711 | 3.694674e-51 | -8.615850e-47 |
| Msa1349570 | Msa1410440 | 0.823653 | 1.233387e-53 | -8.615850e-47 |
| Msa1360960 | Msa1410440 | 0.814336 | 1.622810e-51 | -8.615850e-47 |
| Msa1362790 | Msa1410440 | 0.877805 | 4.679839e-69 | -8.615850e-47 |
| Msa1363330 | Msa1410440 | 0.834778 | 2.461599e-56 | -8.615850e-47 |
| Msa1369150 | Msa1410440 | 0.804853 | 1.769243e-49 | -8.615850e-47 |
| Msa1369190 | Msa1410440 | 0.840024 | 1.115457e-57 | -8.615850e-47 |
| Msa1374240 | Msa1410440 | 0.807296 | 5.418685e-50 | -8.615850e-47 |
| Msa1380380 | Msa1410440 | 0.823550 | 1.304154e-53 | -8.615850e-47 |
| Msa1386600 | Msa1410440 | 0.833453 | 5.286656e-56 | -8.615850e-47 |
| Msa1399530 | Msa1410440 | 0.812496 | 4.117928e-51 | -8.615850e-47 |
| Msa1401390 | Msa1410440 | 0.862681 | 4.267363e-64 | -8.615850e-47 |
| Msa1403570 | Msa1410440 | 0.817369 | 3.418280e-52 | -8.615850e-47 |
| Msa1410440 | Msa1411500 | 0.842078 | 3.220739e-58 | -8.615850e-47 |
| Msa1410440 | Msa1418770 | 0.810432 | 1.156338e-50 | -8.615850e-47 |
| Msa1410440 | Msa1426490 | 0.832879 | 7.347976e-56 | -8.615850e-47 |
| Msa1410440 | Msa1427160 | 0.802406 | 5.695047e-49 | -8.615850e-47 |
| Msa1410440 | Msa1427560 | 0.853360 | 2.515687e-61 | -8.615850e-47 |
| Msa1410440 | Msa1428810 | 0.816422 | 5.577056e-52 | -8.615850e-47 |
| Msa1410440 | Msa1443300 | 0.838844 | 2.259192e-57 | -8.615850e-47 |
| Msa1410440 | Msa1449930 | 0.803826 | 2.895673e-49 | -8.615850e-47 |
| Msa1410440 | Msa1462860 | 0.830952 | 2.197761e-55 | -8.615850e-47 |
| Msa0607610 | Msa1410440 | 0.831017 | 2.117912e-55 | -8.615850e-47 |
| Msa0619860 | Msa1410440 | 0.800680 | 1.286693e-48 | -8.615850e-47 |
| Msa0620990 | Msa1410440 | 0.804076 | 2.569110e-49 | -8.615850e-47 |
| Msa0622750 | Msa1410440 | 0.878081 | 3.747538e-69 | -8.615850e-47 |
| Msa0623200 | Msa1410440 | 0.877539 | 5.793894e-69 | -8.615850e-47 |
| Msa0631250 | Msa1410440 | 0.841044 | 6.032289e-58 | -8.615850e-47 |
| Msa0659030 | Msa1410440 | 0.850507 | 1.623426e-60 | -8.615850e-47 |
| Msa0666230 | Msa1410440 | 0.818522 | 1.875738e-52 | -8.615850e-47 |
| Msa0687870 | Msa1410440 | 0.859248 | 4.716091e-63 | -8.615850e-47 |
| Msa0705000 | Msa1410440 | 0.853981 | 1.667719e-61 | -8.615850e-47 |
| Msa0705040 | Msa1410440 | 0.847567 | 1.065975e-59 | -8.615850e-47 |
| Msa0706500 | Msa1410440 | 0.845369 | 4.239881e-59 | -8.615850e-47 |
| Msa0709780 | Msa1410440 | 0.853151 | 2.887925e-61 | -8.615850e-47 |
| Msa0717380 | Msa1410440 | 0.811472 | 6.883254e-51 | -8.615850e-47 |
| Msa0781080 | Msa1410440 | 0.820849 | 5.520150e-53 | -8.615850e-47 |
| Msa0785130 | Msa1410440 | 0.856372 | 3.364962e-62 | -8.615850e-47 |
| Msa0790400 | Msa1410440 | 0.847717 | 9.694211e-60 | -8.615850e-47 |
| Msa0792420 | Msa1410440 | 0.832648 | 8.382966e-56 | -8.615850e-47 |
| Msa0808800 | Msa1410440 | 0.813177 | 2.920448e-51 | -8.615850e-47 |
| Msa0817540 | Msa1410440 | 0.833651 | 4.718726e-56 | -8.615850e-47 |
| Msa0133540 | Msa1410440 | 0.809505 | 1.830874e-50 | -8.615850e-47 |
| Msa0138920 | Msa1410440 | 0.844670 | 6.547916e-59 | -8.615850e-47 |
| Msa0146340 | Msa1410440 | 0.845521 | 3.855481e-59 | -8.615850e-47 |
| Msa0172900 | Msa1410440 | 0.807819 | 4.194529e-50 | -8.615850e-47 |
| Msa0173530 | Msa1410440 | 0.830027 | 3.699284e-55 | -8.615850e-47 |
| Msa0178120 | Msa1410440 | 0.808377 | 3.190639e-50 | -8.615850e-47 |
| Msa0181490 | Msa1410440 | 0.800094 | 1.693338e-48 | -8.615850e-47 |
| Msa0181610 | Msa1410440 | 0.804949 | 1.689793e-49 | -8.615850e-47 |
| Msa0188690 | Msa1410440 | 0.840025 | 1.114614e-57 | -8.615850e-47 |
| Msa0189700 | Msa1410440 | 0.811542 | 6.644605e-51 | -8.615850e-47 |
| Msa0192230 | Msa1410440 | 0.813275 | 2.778968e-51 | -8.615850e-47 |
| Msa0218830 | Msa1410440 | 0.829468 | 5.061135e-55 | -8.615850e-47 |
| Msa0219120 | Msa1410440 | 0.830550 | 2.756950e-55 | -8.615850e-47 |
| Msa0221030 | Msa1410440 | 0.838769 | 2.361401e-57 | -8.615850e-47 |
| Msa0223170 | Msa1410440 | 0.801263 | 9.779653e-49 | -8.615850e-47 |
| Msa0230490 | Msa1410440 | 0.864506 | 1.157568e-64 | -8.615850e-47 |
| Msa0232010 | Msa1410440 | 0.804494 | 2.102365e-49 | -8.615850e-47 |
| Msa0232080 | Msa1410440 | 0.809452 | 1.879379e-50 | -8.615850e-47 |
| Msa1227690 | Msa1410440 | 0.806701 | 7.238738e-50 | -8.615850e-47 |
| Msa1230580 | Msa1410440 | 0.813848 | 2.079648e-51 | -8.615850e-47 |
| Msa1241190 | Msa1410440 | 0.824224 | 9.063481e-54 | -8.615850e-47 |
| Msa1258710 | Msa1410440 | 0.845818 | 3.202575e-59 | -8.615850e-47 |
| Msa1266060 | Msa1410440 | 0.998339 | 2.859161e-262 | -8.615850e-47 |
| Msa1273340 | Msa1410440 | 0.807647 | 4.564000e-50 | -8.615850e-47 |
| Msa1299590 | Msa1410440 | 0.812768 | 3.590629e-51 | -8.615850e-47 |
| Msa1321790 | Msa1410440 | 0.816798 | 4.592217e-52 | -8.615850e-47 |
| Msa1332250 | Msa1410440 | 0.853472 | 2.336078e-61 | -8.615850e-47 |
| Msa1333560 | Msa1410440 | 0.844063 | 9.532589e-59 | -8.615850e-47 |
| Msa1338190 | Msa1410440 | 0.838855 | 2.243990e-57 | -8.615850e-47 |
| Msa1343260 | Msa1410440 | 0.852036 | 6.005175e-61 | -8.615850e-47 |
| Msa0423750 | Msa1410440 | 0.830818 | 2.369859e-55 | -8.615850e-47 |
| Msa0427780 | Msa1410440 | 0.801251 | 9.832033e-49 | -8.615850e-47 |
| Msa0434920 | Msa1410440 | 0.837229 | 5.879255e-57 | -8.615850e-47 |
| Msa0435370 | Msa1410440 | 0.826614 | 2.462465e-54 | -8.615850e-47 |
| Msa0435420 | Msa1410440 | 0.836908 | 7.102326e-57 | -8.615850e-47 |
| Msa0435570 | Msa1410440 | 0.813633 | 2.318749e-51 | -8.615850e-47 |
| Msa0443390 | Msa1410440 | 0.854438 | 1.230658e-61 | -8.615850e-47 |
| Msa1019240 | Msa1410440 | 0.848345 | 6.503087e-60 | -8.615850e-47 |
| Msa1019260 | Msa1410440 | 0.853135 | 2.919277e-61 | -8.615850e-47 |
| Msa1039520 | Msa1410440 | 0.816389 | 5.671963e-52 | -8.615850e-47 |
| Msa1043690 | Msa1410440 | 0.818903 | 1.537572e-52 | -8.615850e-47 |
| Msa1104140 | Msa1410440 | 0.816184 | 6.304400e-52 | -8.615850e-47 |
| Msa1104210 | Msa1410440 | 0.840403 | 8.881054e-58 | -8.615850e-47 |
| Msa0244780 | Msa1410440 | 0.802072 | 6.672635e-49 | -8.615850e-47 |
| Msa0245580 | Msa1410440 | 0.801282 | 9.692964e-49 | -8.615850e-47 |
| Msa0258850 | Msa1410440 | 0.832083 | 1.157299e-55 | -8.615850e-47 |
| Msa0262480 | Msa1410440 | 0.825385 | 4.824587e-54 | -8.615850e-47 |
| Msa0264010 | Msa1410440 | 0.804434 | 2.164267e-49 | -8.615850e-47 |
| Msa0270210 | Msa1410440 | 0.823503 | 1.337115e-53 | -8.615850e-47 |
| Msa0289580 | Msa1410440 | 0.812677 | 3.758525e-51 | -8.615850e-47 |
| Msa0289610 | Msa1410440 | 0.820753 | 5.807125e-53 | -8.615850e-47 |
| Msa0298200 | Msa1410440 | 0.834230 | 3.379398e-56 | -8.615850e-47 |
| Msa0300350 | Msa1410440 | 0.820378 | 7.081712e-53 | -8.615850e-47 |
| Msa0307850 | Msa1410440 | 0.837429 | 5.224606e-57 | -8.615850e-47 |
| Msa0327300 | Msa1410440 | 0.829854 | 4.078322e-55 | -8.615850e-47 |
| Msa0327330 | Msa1410440 | 0.818230 | 2.184538e-52 | -8.615850e-47 |
| Msa0333190 | Msa1410440 | 0.809988 | 1.441020e-50 | -8.615850e-47 |
| Msa0336010 | Msa1410440 | 0.816362 | 5.749783e-52 | -8.615850e-47 |
| Msa0337670 | Msa1410440 | 0.823255 | 1.528101e-53 | -8.615850e-47 |
| Msa0348830 | Msa1410440 | 0.877320 | 6.906937e-69 | -8.615850e-47 |
| Msa0359040 | Msa1410440 | 0.800449 | 1.433707e-48 | -8.615850e-47 |
| Msa1119070 | Msa1410440 | 0.834119 | 3.602581e-56 | -8.615850e-47 |
| Msa1119170 | Msa1410440 | 0.836685 | 8.094030e-57 | -8.615850e-47 |
| Msa1123830 | Msa1410440 | 0.810424 | 1.160690e-50 | -8.615850e-47 |
| Msa1126510 | Msa1410440 | 0.815841 | 7.518237e-52 | -8.615850e-47 |
| Msa1127590 | Msa1410440 | 0.810166 | 1.319507e-50 | -8.615850e-47 |
| Msa1143650 | Msa1410440 | 0.832143 | 1.118147e-55 | -8.615850e-47 |
| Msa1166860 | Msa1410440 | 0.824224 | 9.063107e-54 | -8.615850e-47 |
| Msa1166870 | Msa1410440 | 0.833584 | 4.903950e-56 | -8.615850e-47 |
| Msa1167540 | Msa1410440 | 0.805997 | 1.018709e-49 | -8.615850e-47 |
| Msa1171960 | Msa1410440 | 0.807132 | 5.869050e-50 | -8.615850e-47 |
| Msa1208020 | Msa1410440 | 0.828940 | 6.799884e-55 | -8.615850e-47 |
| Msa1218140 | Msa1410440 | 0.829007 | 6.547742e-55 | -8.615850e-47 |
| Msa0483110 | Msa1410440 | 0.826574 | 2.517580e-54 | -8.615850e-47 |
| Msa0526540 | Msa1410440 | 0.838345 | 3.039103e-57 | -8.615850e-47 |
| Msa0527020 | Msa1410440 | 0.808767 | 2.634982e-50 | -8.615850e-47 |
| Msa0527150 | Msa1410440 | 0.832845 | 7.489687e-56 | -8.615850e-47 |
| Msa0534750 | Msa1410440 | 0.841889 | 3.613212e-58 | -8.615850e-47 |
| Msa0568470 | Msa1410440 | 0.800666 | 1.295093e-48 | -8.615850e-47 |
| Msa0576940 | Msa1410440 | 0.843102 | 1.722441e-58 | -8.615850e-47 |
| Msa0590940 | Msa1410440 | 0.819459 | 1.148441e-52 | -8.615850e-47 |
| Msa0867060 | Msa1410440 | 0.997283 | 7.263815e-240 | -8.615850e-47 |
| Msa0872670 | Msa1410440 | 0.815350 | 9.672558e-52 | -8.615850e-47 |
| Msa0881290 | Msa1410440 | 0.811870 | 5.639425e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410440 | MtrunA17_Chr4g0070981 | 99.516 | 413 | 2 | 0 | 1 | 413 | 1 | 413 | 0.0 | 850 |
| Msa1410440 | MtrunA17_Chr2g0299681 | 93.705 | 413 | 26 | 0 | 1 | 413 | 1 | 413 | 0.0 | 803 |
| Msa1410440 | MtrunA17_Chr8g0342861 | 91.525 | 413 | 35 | 0 | 1 | 413 | 1 | 413 | 0.0 | 785 |
| Msa1410440 | MtrunA17_Chr2g0329931 | 91.525 | 413 | 35 | 0 | 1 | 413 | 1 | 413 | 0.0 | 782 |
| Msa1410440 | MtrunA17_Chr2g0297261 | 64.879 | 373 | 131 | 0 | 41 | 413 | 34 | 406 | 0.0 | 512 |
| Msa1410440 | MtrunA17_Chr1g0169331 | 60.152 | 394 | 120 | 5 | 56 | 413 | 6 | 398 | 5.30e-161 | 458 |
| Msa1410440 | MtrunA17_Chr8g0342851 | 61.272 | 346 | 102 | 4 | 71 | 413 | 3 | 319 | 8.21e-140 | 402 |
| Msa1410440 | MtrunA17_Chr7g0247191 | 39.948 | 388 | 220 | 3 | 19 | 406 | 139 | 513 | 9.25e-91 | 283 |
| Msa1410440 | MtrunA17_Chr7g0247181 | 39.433 | 388 | 222 | 3 | 19 | 406 | 129 | 503 | 1.34e-89 | 280 |
| Msa1410440 | MtrunA17_Chr7g0247221 | 39.433 | 388 | 222 | 3 | 19 | 406 | 132 | 506 | 2.22e-89 | 280 |
| Msa1410440 | MtrunA17_Chr4g0003441 | 39.402 | 368 | 217 | 6 | 47 | 409 | 114 | 480 | 1.55e-75 | 243 |
| Msa1410440 | MtrunA17_Chr1g0149251 | 38.872 | 337 | 200 | 6 | 78 | 409 | 1 | 336 | 1.83e-70 | 225 |
| Msa1410440 | MtrunA17_Chr3g0107851 | 35.467 | 375 | 220 | 5 | 40 | 396 | 116 | 486 | 9.07e-68 | 224 |
| Msa1410440 | MtrunA17_Chr1g0179761 | 35.492 | 417 | 227 | 13 | 28 | 411 | 71 | 478 | 2.59e-66 | 219 |
| Msa1410440 | MtrunA17_Chr7g0271121 | 38.304 | 342 | 196 | 8 | 66 | 396 | 131 | 468 | 2.14e-62 | 214 |
| Msa1410440 | MtrunA17_Chr3g0095031 | 33.413 | 419 | 258 | 8 | 2 | 411 | 59 | 465 | 1.31e-61 | 208 |
| Msa1410440 | MtrunA17_Chr2g0330401 | 33.611 | 360 | 233 | 2 | 41 | 394 | 96 | 455 | 2.77e-61 | 206 |
| Msa1410440 | MtrunA17_Chr3g0121351 | 34.103 | 390 | 234 | 7 | 40 | 407 | 144 | 532 | 8.82e-61 | 207 |
| Msa1410440 | MtrunA17_Chr4g0076491 | 33.770 | 382 | 215 | 6 | 47 | 397 | 293 | 667 | 1.53e-60 | 208 |
| Msa1410440 | MtrunA17_Chr5g0442191 | 34.501 | 371 | 230 | 7 | 45 | 406 | 85 | 451 | 3.14e-60 | 205 |
| Msa1410440 | MtrunA17_Chr6g0483491 | 32.884 | 371 | 245 | 3 | 41 | 408 | 10 | 379 | 1.33e-59 | 200 |
| Msa1410440 | MtrunA17_Chr7g0236841 | 32.884 | 371 | 245 | 3 | 41 | 408 | 10 | 379 | 3.19e-59 | 199 |
| Msa1410440 | MtrunA17_Chr7g0270131 | 34.648 | 355 | 223 | 6 | 41 | 387 | 232 | 585 | 5.16e-59 | 205 |
| Msa1410440 | MtrunA17_Chr6g0449741 | 33.947 | 380 | 215 | 6 | 47 | 397 | 255 | 627 | 6.81e-59 | 203 |
| Msa1410440 | MtrunA17_Chr1g0193491 | 35.196 | 358 | 204 | 8 | 45 | 384 | 118 | 465 | 3.05e-58 | 201 |
| Msa1410440 | MtrunA17_Chr4g0063551 | 33.673 | 392 | 231 | 6 | 42 | 407 | 141 | 529 | 6.44e-58 | 201 |
| Msa1410440 | MtrunA17_Chr4g0040761 | 32.162 | 370 | 247 | 3 | 42 | 407 | 20 | 389 | 6.27e-57 | 199 |
| Msa1410440 | MtrunA17_Chr2g0310581 | 32.292 | 384 | 253 | 4 | 17 | 395 | 31 | 412 | 1.02e-56 | 194 |
| Msa1410440 | MtrunA17_Chr1g0176041 | 31.701 | 388 | 245 | 5 | 40 | 407 | 153 | 540 | 1.84e-55 | 193 |
| Msa1410440 | MtrunA17_Chr1g0157691 | 30.848 | 389 | 250 | 8 | 41 | 413 | 147 | 532 | 2.67e-55 | 192 |
| Msa1410440 | MtrunA17_Chr3g0098121 | 34.153 | 366 | 229 | 5 | 40 | 396 | 151 | 513 | 1.51e-54 | 192 |
| Msa1410440 | MtrunA17_Chr1g0200181 | 30.848 | 389 | 250 | 8 | 41 | 413 | 145 | 530 | 1.70e-54 | 190 |
| Msa1410440 | MtrunA17_Chr2g0277821 | 33.594 | 384 | 239 | 5 | 41 | 412 | 504 | 883 | 2.60e-54 | 194 |
| Msa1410440 | MtrunA17_Chr6g0449911 | 33.681 | 383 | 237 | 9 | 41 | 412 | 165 | 541 | 3.44e-54 | 191 |
| Msa1410440 | MtrunA17_Chr5g0409981 | 33.505 | 388 | 237 | 7 | 28 | 403 | 95 | 473 | 5.65e-53 | 184 |
| Msa1410440 | MtrunA17_Chr2g0293631 | 32.162 | 370 | 240 | 5 | 24 | 387 | 483 | 847 | 2.13e-52 | 188 |
| Msa1410440 | MtrunA17_Chr6g0461751 | 32.418 | 364 | 234 | 6 | 41 | 394 | 140 | 501 | 2.65e-49 | 175 |
| Msa1410440 | MtrunA17_Chr2g0300291 | 33.243 | 367 | 232 | 6 | 40 | 396 | 140 | 503 | 5.01e-49 | 177 |
| Msa1410440 | MtrunA17_Chr2g0307471 | 31.335 | 367 | 233 | 9 | 40 | 392 | 90 | 451 | 1.95e-45 | 165 |
| Msa1410440 | MtrunA17_Chr4g0062301 | 30.919 | 359 | 226 | 10 | 50 | 392 | 106 | 458 | 3.44e-43 | 159 |
| Msa1410440 | MtrunA17_Chr7g0263771 | 28.900 | 391 | 251 | 7 | 34 | 412 | 129 | 504 | 2.79e-42 | 157 |
| Msa1410440 | MtrunA17_Chr3g0114081 | 29.730 | 370 | 232 | 7 | 47 | 389 | 22 | 390 | 5.90e-42 | 155 |
| Msa1410440 | MtrunA17_Chr6g0475251 | 30.199 | 351 | 218 | 6 | 45 | 380 | 115 | 453 | 1.89e-40 | 152 |
| Msa1410440 | MtrunA17_Chr2g0309551 | 25.837 | 418 | 245 | 7 | 41 | 396 | 109 | 523 | 3.71e-40 | 150 |
| Msa1410440 | MtrunA17_Chr4g0058591 | 30.938 | 320 | 215 | 2 | 41 | 354 | 202 | 521 | 2.46e-39 | 147 |
| Msa1410440 | MtrunA17_Chr7g0236831 | 25.850 | 441 | 241 | 10 | 39 | 399 | 161 | 595 | 2.12e-37 | 144 |
| Msa1410440 | MtrunA17_Chr8g0347171 | 27.968 | 379 | 234 | 9 | 42 | 391 | 161 | 529 | 3.94e-37 | 142 |
| Msa1410440 | MtrunA17_Chr8g0347161 | 29.167 | 360 | 232 | 9 | 42 | 380 | 103 | 460 | 7.90e-37 | 141 |
| Msa1410440 | MtrunA17_Chr1g0204391 | 28.610 | 367 | 219 | 7 | 49 | 380 | 52 | 410 | 3.08e-36 | 139 |
| Msa1410440 | MtrunA17_Chr8g0386451 | 28.052 | 385 | 253 | 9 | 42 | 406 | 289 | 669 | 3.31e-36 | 140 |
| Msa1410440 | MtrunA17_Chr8g0347151 | 27.704 | 379 | 235 | 8 | 42 | 391 | 202 | 570 | 3.75e-36 | 140 |
| Msa1410440 | MtrunA17_Chr6g0466611 | 28.947 | 380 | 242 | 9 | 41 | 396 | 142 | 517 | 5.87e-35 | 137 |
| Msa1410440 | MtrunA17_Chr4g0025141 | 36.715 | 207 | 116 | 5 | 214 | 405 | 14 | 220 | 2.64e-34 | 127 |
| Msa1410440 | MtrunA17_Chr1g0192021 | 26.895 | 409 | 244 | 8 | 41 | 397 | 26 | 431 | 2.86e-34 | 134 |
| Msa1410440 | MtrunA17_Chr4g0034411 | 28.809 | 361 | 235 | 11 | 68 | 413 | 102 | 455 | 5.97e-33 | 131 |
| Msa1410440 | MtrunA17_Chr5g0443991 | 28.571 | 350 | 229 | 10 | 68 | 402 | 102 | 445 | 1.85e-32 | 129 |
| Msa1410440 | MtrunA17_Chr3g0137901 | 39.024 | 164 | 98 | 2 | 247 | 409 | 10 | 172 | 8.56e-32 | 119 |
| Msa1410440 | MtrunA17_Chr5g0429221 | 26.975 | 367 | 248 | 7 | 41 | 396 | 3 | 360 | 1.06e-29 | 119 |
| Msa1410440 | MtrunA17_Chr3g0137891 | 42.236 | 161 | 90 | 3 | 78 | 235 | 1 | 161 | 8.01e-28 | 110 |
| Msa1410440 | MtrunA17_Chr3g0145781 | 25.728 | 412 | 252 | 13 | 24 | 394 | 120 | 518 | 1.54e-25 | 108 |
| Msa1410440 | MtrunA17_Chr4g0039471 | 37.097 | 186 | 114 | 2 | 41 | 223 | 223 | 408 | 8.50e-24 | 102 |
| Msa1410440 | MtrunA17_Chr4g0004301 | 25.729 | 377 | 210 | 13 | 79 | 388 | 71 | 444 | 3.64e-23 | 101 |
| Msa1410440 | MtrunA17_Chr5g0434301 | 25.729 | 377 | 210 | 13 | 79 | 388 | 71 | 444 | 1.70e-22 | 99.4 |
| Msa1410440 | MtrunA17_Chr4g0025131 | 35.802 | 162 | 97 | 3 | 41 | 197 | 56 | 215 | 1.83e-22 | 96.7 |
| Msa1410440 | MtrunA17_Chr4g0062321 | 29.237 | 236 | 157 | 6 | 117 | 348 | 4 | 233 | 1.91e-22 | 95.5 |
| Msa1410440 | MtrunA17_Chr4g0025101 | 30.252 | 238 | 100 | 7 | 198 | 411 | 7 | 202 | 3.71e-22 | 94.0 |
| Msa1410440 | MtrunA17_Chr4g0074521 | 26.184 | 359 | 223 | 11 | 49 | 372 | 90 | 441 | 3.83e-22 | 98.2 |
| Msa1410440 | MtrunA17_Chr8g0349951 | 37.500 | 136 | 84 | 1 | 41 | 175 | 10 | 145 | 1.19e-18 | 82.4 |
| Msa1410440 | MtrunA17_Chr4g0029191 | 31.183 | 186 | 118 | 5 | 41 | 217 | 44 | 228 | 6.24e-18 | 85.9 |
| Msa1410440 | MtrunA17_Chr4g0029191 | 35.106 | 94 | 61 | 0 | 310 | 403 | 392 | 485 | 8.68e-14 | 73.2 |
| Msa1410440 | MtrunA17_Chr2g0301281 | 30.645 | 186 | 119 | 5 | 41 | 217 | 41 | 225 | 1.91e-17 | 84.3 |
| Msa1410440 | MtrunA17_Chr2g0301281 | 34.021 | 97 | 63 | 1 | 310 | 406 | 389 | 484 | 1.08e-13 | 72.8 |
| Msa1410440 | MtrunA17_Chr1g0155201 | 27.660 | 235 | 143 | 9 | 160 | 387 | 13 | 227 | 5.23e-15 | 75.9 |
| Msa1410440 | MtrunA17_Chr8g0354761 | 23.204 | 362 | 244 | 11 | 64 | 404 | 31 | 379 | 1.90e-14 | 74.7 |
| Msa1410440 | MtrunA17_Chr0c30g0494091 | 30.065 | 153 | 98 | 2 | 49 | 192 | 90 | 242 | 1.66e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410440 | AT3G13920.1 | 91.283 | 413 | 35 | 1 | 1 | 413 | 1 | 412 | 0.0 | 776 |
| Msa1410440 | AT1G54270.1 | 91.304 | 414 | 33 | 2 | 1 | 413 | 1 | 412 | 0.0 | 771 |
| Msa1410440 | AT3G13920.4 | 90.073 | 413 | 35 | 2 | 1 | 413 | 1 | 407 | 0.0 | 759 |
| Msa1410440 | AT1G72730.1 | 88.164 | 414 | 48 | 1 | 1 | 413 | 1 | 414 | 0.0 | 756 |
| Msa1410440 | AT1G54270.2 | 90.097 | 414 | 33 | 3 | 1 | 413 | 1 | 407 | 0.0 | 754 |
| Msa1410440 | AT3G13920.3 | 93.766 | 385 | 24 | 0 | 29 | 413 | 18 | 402 | 0.0 | 745 |
| Msa1410440 | AT3G13920.2 | 91.560 | 391 | 32 | 1 | 1 | 391 | 1 | 390 | 0.0 | 736 |
| Msa1410440 | AT3G13920.5 | 91.560 | 391 | 32 | 1 | 1 | 391 | 5 | 394 | 0.0 | 736 |
| Msa1410440 | AT3G19760.1 | 64.191 | 377 | 135 | 0 | 37 | 413 | 32 | 408 | 4.66e-180 | 508 |
| Msa1410440 | AT1G51380.1 | 58.808 | 369 | 152 | 0 | 41 | 409 | 23 | 391 | 7.95e-162 | 461 |
| Msa1410440 | AT1G51380.2 | 59.127 | 252 | 103 | 0 | 41 | 292 | 23 | 274 | 2.51e-107 | 318 |
| Msa1410440 | AT3G61240.2 | 40.722 | 388 | 217 | 4 | 22 | 409 | 117 | 491 | 9.80e-93 | 288 |
| Msa1410440 | AT3G61240.1 | 40.722 | 388 | 217 | 4 | 22 | 409 | 117 | 491 | 9.80e-93 | 288 |
| Msa1410440 | AT4G00660.1 | 38.875 | 391 | 226 | 3 | 19 | 409 | 121 | 498 | 1.03e-90 | 283 |
| Msa1410440 | AT4G00660.2 | 38.875 | 391 | 226 | 3 | 19 | 409 | 121 | 498 | 1.03e-90 | 283 |
| Msa1410440 | AT2G45810.1 | 40.415 | 386 | 217 | 4 | 22 | 407 | 147 | 519 | 2.75e-90 | 283 |
| Msa1410440 | AT1G51380.4 | 56.872 | 211 | 91 | 0 | 41 | 251 | 23 | 233 | 6.45e-82 | 254 |
| Msa1410440 | AT1G51380.3 | 56.872 | 211 | 91 | 0 | 41 | 251 | 23 | 233 | 8.78e-82 | 253 |
| Msa1410440 | AT5G11170.1 | 38.046 | 389 | 234 | 7 | 27 | 409 | 32 | 419 | 3.89e-76 | 243 |
| Msa1410440 | AT5G11200.1 | 38.046 | 389 | 234 | 7 | 27 | 409 | 32 | 419 | 3.89e-76 | 243 |
| Msa1410440 | AT5G11170.2 | 38.872 | 337 | 200 | 6 | 78 | 409 | 1 | 336 | 1.87e-69 | 223 |
| Msa1410440 | AT5G11200.3 | 34.419 | 430 | 234 | 8 | 27 | 409 | 32 | 460 | 9.96e-68 | 222 |
| Msa1410440 | AT3G53110.1 | 35.000 | 400 | 232 | 11 | 33 | 407 | 81 | 477 | 2.86e-67 | 222 |
| Msa1410440 | AT5G26742.1 | 35.000 | 420 | 244 | 10 | 9 | 413 | 80 | 485 | 9.00e-65 | 221 |
| Msa1410440 | AT5G26742.2 | 35.000 | 420 | 244 | 10 | 9 | 413 | 80 | 485 | 9.13e-65 | 221 |
| Msa1410440 | AT5G26742.3 | 35.844 | 385 | 215 | 10 | 44 | 413 | 25 | 392 | 2.22e-63 | 215 |
| Msa1410440 | AT2G33730.1 | 34.937 | 395 | 225 | 6 | 41 | 410 | 314 | 701 | 2.57e-63 | 216 |
| Msa1410440 | AT5G63120.2 | 34.392 | 378 | 242 | 2 | 42 | 413 | 167 | 544 | 6.53e-63 | 213 |
| Msa1410440 | AT3G22330.1 | 32.710 | 428 | 264 | 9 | 3 | 411 | 58 | 480 | 1.92e-62 | 212 |
| Msa1410440 | AT3G22310.2 | 34.309 | 376 | 234 | 6 | 45 | 411 | 121 | 492 | 2.85e-62 | 211 |
| Msa1410440 | AT3G22310.1 | 34.309 | 376 | 234 | 6 | 45 | 411 | 121 | 492 | 3.75e-62 | 211 |
| Msa1410440 | AT1G55150.1 | 34.571 | 350 | 223 | 2 | 41 | 384 | 100 | 449 | 4.17e-62 | 208 |
| Msa1410440 | AT1G55150.2 | 34.571 | 350 | 223 | 2 | 41 | 384 | 125 | 474 | 5.67e-62 | 209 |
| Msa1410440 | AT1G77030.1 | 32.432 | 370 | 246 | 3 | 42 | 407 | 30 | 399 | 5.42e-60 | 209 |
| Msa1410440 | AT3G58570.1 | 33.416 | 401 | 236 | 8 | 33 | 406 | 136 | 532 | 2.36e-58 | 202 |
| Msa1410440 | AT3G58510.1 | 33.247 | 385 | 227 | 8 | 43 | 406 | 160 | 535 | 6.95e-58 | 200 |
| Msa1410440 | AT3G58510.3 | 33.247 | 385 | 227 | 8 | 43 | 406 | 160 | 535 | 6.95e-58 | 200 |
| Msa1410440 | AT3G58510.2 | 33.247 | 385 | 227 | 8 | 43 | 406 | 160 | 535 | 6.95e-58 | 200 |
| Msa1410440 | AT2G42520.2 | 33.017 | 421 | 248 | 10 | 16 | 406 | 129 | 545 | 1.36e-57 | 199 |
| Msa1410440 | AT2G42520.1 | 33.017 | 421 | 248 | 10 | 16 | 406 | 129 | 545 | 1.36e-57 | 199 |
| Msa1410440 | AT2G42520.3 | 33.017 | 421 | 248 | 10 | 16 | 406 | 129 | 545 | 1.36e-57 | 199 |
| Msa1410440 | AT5G14610.5 | 34.204 | 383 | 235 | 10 | 41 | 412 | 170 | 546 | 5.12e-57 | 198 |
| Msa1410440 | AT5G14610.6 | 34.204 | 383 | 235 | 10 | 41 | 412 | 162 | 538 | 5.41e-57 | 198 |
| Msa1410440 | AT5G14610.2 | 34.204 | 383 | 235 | 10 | 41 | 412 | 162 | 538 | 5.67e-57 | 198 |
| Msa1410440 | AT5G60990.1 | 32.143 | 392 | 250 | 5 | 36 | 413 | 5 | 394 | 3.04e-56 | 192 |
| Msa1410440 | AT1G16280.1 | 32.964 | 361 | 237 | 2 | 41 | 396 | 59 | 419 | 1.28e-55 | 191 |
| Msa1410440 | AT4G16630.1 | 33.867 | 375 | 239 | 4 | 31 | 396 | 155 | 529 | 1.40e-55 | 196 |
| Msa1410440 | AT1G20920.2 | 33.511 | 376 | 240 | 5 | 46 | 412 | 197 | 571 | 1.50e-55 | 196 |
| Msa1410440 | AT3G01540.1 | 33.862 | 378 | 243 | 6 | 41 | 412 | 159 | 535 | 2.40e-55 | 193 |
| Msa1410440 | AT3G01540.4 | 33.862 | 378 | 243 | 6 | 41 | 412 | 159 | 535 | 2.43e-55 | 193 |
| Msa1410440 | AT3G01540.2 | 33.862 | 378 | 243 | 6 | 41 | 412 | 159 | 535 | 2.43e-55 | 193 |
| Msa1410440 | AT3G01540.3 | 33.862 | 378 | 243 | 6 | 41 | 412 | 159 | 535 | 2.43e-55 | 193 |
| Msa1410440 | AT2G47330.1 | 34.807 | 362 | 213 | 8 | 41 | 387 | 229 | 582 | 2.53e-55 | 195 |
| Msa1410440 | AT3G06480.1 | 33.681 | 383 | 241 | 6 | 39 | 412 | 434 | 812 | 6.06e-55 | 196 |
| Msa1410440 | AT1G20920.4 | 33.511 | 376 | 240 | 5 | 46 | 412 | 535 | 909 | 3.42e-54 | 194 |
| Msa1410440 | AT1G20920.6 | 33.511 | 376 | 240 | 5 | 46 | 412 | 535 | 909 | 3.42e-54 | 194 |
| Msa1410440 | AT1G20920.3 | 33.511 | 376 | 240 | 5 | 46 | 412 | 535 | 909 | 3.42e-54 | 194 |
| Msa1410440 | AT1G20920.7 | 33.511 | 376 | 240 | 5 | 46 | 412 | 535 | 909 | 3.42e-54 | 194 |
| Msa1410440 | AT1G20920.5 | 33.511 | 376 | 240 | 5 | 46 | 412 | 535 | 909 | 3.42e-54 | 194 |
| Msa1410440 | AT1G20920.1 | 33.511 | 376 | 240 | 5 | 46 | 412 | 535 | 909 | 3.42e-54 | 194 |
| Msa1410440 | AT5G14610.7 | 33.062 | 369 | 230 | 9 | 55 | 412 | 45 | 407 | 8.21e-53 | 184 |
| Msa1410440 | AT5G14610.3 | 33.062 | 369 | 230 | 9 | 55 | 412 | 45 | 407 | 8.21e-53 | 184 |
| Msa1410440 | AT5G51280.1 | 30.412 | 388 | 251 | 7 | 41 | 412 | 147 | 531 | 1.07e-52 | 185 |
| Msa1410440 | AT4G33370.1 | 31.443 | 388 | 247 | 8 | 41 | 412 | 98 | 482 | 1.17e-52 | 184 |
| Msa1410440 | AT1G28180.1 | 35.072 | 345 | 204 | 7 | 79 | 410 | 12 | 349 | 6.01e-52 | 178 |
| Msa1410440 | AT5G14610.1 | 32.984 | 382 | 239 | 10 | 42 | 412 | 231 | 606 | 6.69e-52 | 185 |
| Msa1410440 | AT3G02065.3 | 30.750 | 400 | 260 | 7 | 6 | 394 | 80 | 473 | 7.36e-52 | 181 |
| Msa1410440 | AT3G02065.2 | 30.750 | 400 | 260 | 7 | 6 | 394 | 80 | 473 | 7.36e-52 | 181 |
| Msa1410440 | AT1G31970.1 | 32.713 | 376 | 235 | 6 | 41 | 403 | 117 | 487 | 2.96e-50 | 178 |
| Msa1410440 | AT3G18600.1 | 31.937 | 382 | 246 | 7 | 41 | 412 | 90 | 467 | 3.67e-50 | 178 |
| Msa1410440 | AT1G12770.2 | 27.163 | 416 | 241 | 6 | 41 | 396 | 111 | 524 | 1.11e-48 | 174 |
| Msa1410440 | AT1G12770.1 | 27.163 | 416 | 241 | 6 | 41 | 396 | 111 | 524 | 1.11e-48 | 174 |
| Msa1410440 | AT3G09720.2 | 29.843 | 382 | 259 | 5 | 34 | 412 | 138 | 513 | 1.36e-47 | 171 |
| Msa1410440 | AT3G09720.1 | 29.843 | 382 | 259 | 5 | 34 | 412 | 138 | 513 | 1.36e-47 | 171 |
| Msa1410440 | AT3G02065.1 | 32.523 | 329 | 209 | 6 | 77 | 394 | 10 | 336 | 7.59e-47 | 165 |
| Msa1410440 | AT3G09620.2 | 32.267 | 375 | 211 | 8 | 46 | 409 | 403 | 745 | 1.43e-46 | 172 |
| Msa1410440 | AT3G09620.1 | 32.267 | 375 | 211 | 8 | 46 | 409 | 402 | 744 | 1.52e-46 | 172 |
| Msa1410440 | AT5G65900.1 | 31.180 | 356 | 235 | 5 | 41 | 387 | 155 | 509 | 1.62e-45 | 166 |
| Msa1410440 | AT5G05450.1 | 29.737 | 380 | 239 | 9 | 50 | 404 | 26 | 402 | 6.37e-44 | 161 |
| Msa1410440 | AT5G63120.1 | 34.091 | 308 | 197 | 2 | 42 | 343 | 167 | 474 | 8.65e-44 | 159 |
| Msa1410440 | AT5G63120.3 | 34.091 | 308 | 197 | 2 | 42 | 343 | 167 | 474 | 9.07e-44 | 159 |
| Msa1410440 | AT5G63120.4 | 34.091 | 308 | 197 | 2 | 42 | 343 | 167 | 474 | 9.07e-44 | 159 |
| Msa1410440 | AT5G63120.5 | 34.091 | 308 | 197 | 2 | 42 | 343 | 167 | 474 | 9.07e-44 | 159 |
| Msa1410440 | AT5G62190.1 | 30.978 | 368 | 230 | 8 | 55 | 405 | 111 | 471 | 4.85e-43 | 160 |
| Msa1410440 | AT1G71370.1 | 30.056 | 356 | 233 | 7 | 47 | 387 | 23 | 377 | 2.28e-42 | 157 |
| Msa1410440 | AT5G14610.4 | 32.934 | 334 | 207 | 10 | 41 | 363 | 170 | 497 | 3.44e-41 | 152 |
| Msa1410440 | AT3G06480.2 | 32.198 | 323 | 206 | 6 | 39 | 352 | 434 | 752 | 1.36e-38 | 148 |
| Msa1410440 | AT5G63630.1 | 27.020 | 396 | 247 | 8 | 42 | 407 | 56 | 439 | 1.02e-37 | 143 |
| Msa1410440 | AT5G63630.2 | 27.020 | 396 | 247 | 8 | 42 | 407 | 250 | 633 | 1.55e-36 | 142 |
| Msa1410440 | AT2G07750.1 | 27.073 | 410 | 256 | 11 | 29 | 407 | 362 | 759 | 2.55e-36 | 141 |
| Msa1410440 | AT5G08620.1 | 27.822 | 381 | 240 | 6 | 42 | 395 | 82 | 454 | 3.78e-36 | 139 |
| Msa1410440 | AT5G08610.1 | 27.297 | 381 | 242 | 6 | 42 | 395 | 384 | 756 | 1.04e-35 | 140 |
| Msa1410440 | AT5G11200.2 | 37.247 | 247 | 140 | 6 | 27 | 267 | 32 | 269 | 1.06e-34 | 134 |
| Msa1410440 | AT5G11200.2 | 37.356 | 174 | 106 | 3 | 238 | 409 | 306 | 478 | 5.13e-29 | 118 |
| Msa1410440 | AT1G63250.1 | 27.047 | 403 | 253 | 10 | 35 | 407 | 321 | 712 | 2.85e-34 | 135 |
| Msa1410440 | AT4G34910.1 | 26.166 | 386 | 228 | 7 | 41 | 372 | 47 | 429 | 3.61e-33 | 131 |
| Msa1410440 | AT5G54910.1 | 27.763 | 371 | 244 | 10 | 42 | 396 | 73 | 435 | 2.97e-32 | 129 |
| Msa1410440 | AT5G19210.2 | 27.551 | 392 | 234 | 12 | 49 | 402 | 85 | 464 | 1.87e-31 | 125 |
| Msa1410440 | AT2G40700.1 | 25.393 | 445 | 249 | 13 | 41 | 403 | 31 | 474 | 1.99e-31 | 126 |
| Msa1410440 | AT3G16840.2 | 25.968 | 439 | 238 | 11 | 39 | 400 | 190 | 618 | 1.21e-30 | 125 |
| Msa1410440 | AT3G16840.1 | 25.968 | 439 | 238 | 11 | 39 | 400 | 189 | 617 | 1.44e-30 | 124 |
| Msa1410440 | AT4G09730.1 | 25.773 | 388 | 252 | 9 | 37 | 396 | 109 | 488 | 1.89e-30 | 124 |
| Msa1410440 | AT1G71280.2 | 29.073 | 313 | 180 | 10 | 47 | 345 | 24 | 308 | 6.39e-29 | 115 |
| Msa1410440 | AT3G06980.1 | 28.900 | 391 | 236 | 13 | 41 | 394 | 375 | 760 | 9.84e-29 | 119 |
| Msa1410440 | AT1G71280.1 | 29.167 | 312 | 181 | 9 | 47 | 345 | 24 | 308 | 5.04e-28 | 115 |
| Msa1410440 | AT4G15850.1 | 25.066 | 379 | 208 | 13 | 79 | 387 | 74 | 446 | 4.42e-25 | 107 |
| Msa1410440 | AT5G19210.1 | 26.006 | 323 | 179 | 11 | 123 | 402 | 2 | 307 | 1.80e-17 | 83.2 |
| Msa1410440 | AT5G19210.3 | 26.006 | 323 | 179 | 11 | 123 | 402 | 2 | 307 | 1.80e-17 | 83.2 |
| Msa1410440 | AT1G28180.2 | 38.095 | 126 | 55 | 4 | 63 | 177 | 5 | 118 | 5.10e-14 | 68.9 |
Find 147 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCATTGTTGAATTCATTAT+TGG | 0.154821 | tig0023654:-77746 | Msa1410440:three_prime_UTR |
| TTCCTTCGTGACAAAGTTAA+TGG | 0.209772 | tig0023654:+78028 | None:intergenic |
| AAAGACGACACTTGTTAAAA+TGG | 0.238528 | tig0023654:-82064 | Msa1410440:five_prime_UTR |
| ATTATGCGTGAATTCCGTTC+TGG | 0.257405 | tig0023654:-78203 | Msa1410440:CDS |
| AAGCAGAAATAAAACCAAAA+AGG | 0.257431 | tig0023654:+77844 | None:intergenic |
| ACAAACATCTTGATGTAATC+TGG | 0.288428 | tig0023654:+79388 | None:intergenic |
| CTAACACATTGTAAAACTTC+TGG | 0.300063 | tig0023654:+77982 | None:intergenic |
| CGCTAGTTGGTCAAACTAAC+TGG | 0.301312 | tig0023654:+81992 | None:intergenic |
| CGGAGTTAGTTAACGGAGTT+AGG | 0.302052 | tig0023654:+81800 | None:intergenic |
| ACTAATTTCCGACTAATATA+TGG | 0.309434 | tig0023654:+77907 | None:intergenic |
| CAGCTGATGGAGATGAATTC+TGG | 0.313882 | tig0023654:-80883 | Msa1410440:CDS |
| TAGTCGGAAATTAGTACTTT+TGG | 0.320355 | tig0023654:-77899 | Msa1410440:three_prime_UTR |
| GAATTCATTATTGGCCAAAT+TGG | 0.323036 | tig0023654:-77737 | Msa1410440:three_prime_UTR |
| GACACTTGTTAAAATGGTTT+TGG | 0.326020 | tig0023654:-82058 | Msa1410440:five_prime_UTR |
| TTGACTGAGAGGGGTAAATT+AGG | 0.328799 | tig0023654:-81969 | Msa1410440:five_prime_UTR |
| CACTCTTACTTATTTCTAGA+AGG | 0.332605 | tig0023654:-77703 | Msa1410440:three_prime_UTR |
| AAACTGCTTAATACCCTCTA+AGG | 0.342172 | tig0023654:+78418 | None:intergenic |
| TCAACTCCGCGGCGTAGATC+CGG | 0.346393 | tig0023654:-81839 | Msa1410440:five_prime_UTR |
| TTCTATCTTGCAGTTATGGC+TGG | 0.354302 | tig0023654:-81085 | Msa1410440:intron |
| TTTGAAGTTGTCTGAATATC+GGG | 0.356229 | tig0023654:-77778 | Msa1410440:three_prime_UTR |
| GCGTGATGAGCTTACCTTAG+AGG | 0.362955 | tig0023654:-78432 | Msa1410440:CDS |
| GTGAGTGTCTAACACCAATT+TGG | 0.377530 | tig0023654:+77723 | None:intergenic |
| TTCTCGAGGTTTCAAAGATC+AGG | 0.384116 | tig0023654:-79341 | Msa1410440:intron |
| CAACAGGCTCAGTCTGGAAC+CGG | 0.398765 | tig0023654:-79682 | Msa1410440:CDS |
| ATACGATAAAACCAAGCAAC+AGG | 0.405290 | tig0023654:+81907 | None:intergenic |
| CTTTACCTTACCCTGTTGCT+TGG | 0.405864 | tig0023654:-81918 | Msa1410440:five_prime_UTR |
| TTATGCGTGAATTCCGTTCT+GGG | 0.406482 | tig0023654:-78202 | Msa1410440:CDS |
| CATAATATCAACGAGTCTAA+TGG | 0.408740 | tig0023654:+77572 | None:intergenic |
| TTATGTCAATGTTGAGAAAG+AGG | 0.412746 | tig0023654:-78396 | Msa1410440:CDS |
| CAACTCCGCGGCGTAGATCC+GGG | 0.416571 | tig0023654:-81838 | Msa1410440:five_prime_UTR |
| CTCAGGGGCATTTATGCATA+TGG | 0.421726 | tig0023654:-80803 | Msa1410440:intron |
| GGGACTTGATGTTATTCAAC+AGG | 0.422508 | tig0023654:-79698 | Msa1410440:CDS |
| AGAAGCTCAGCAACATTTGA+TGG | 0.425416 | tig0023654:+77948 | None:intergenic |
| TTCGGTTTAATCCACTTTCA+AGG | 0.427640 | tig0023654:-81771 | Msa1410440:intron |
| TCACATTGTAGTCAAGTTGC+TGG | 0.431595 | tig0023654:+79629 | None:intergenic |
| CTTTGTCTGTTTGATAGTCT+TGG | 0.431769 | tig0023654:-77816 | Msa1410440:three_prime_UTR |
| TGTGACTCAGTGCCAGGCCT+TGG | 0.434416 | tig0023654:-79611 | Msa1410440:CDS |
| TTATAACCAGAGACACTTGT+TGG | 0.437621 | tig0023654:+78129 | None:intergenic |
| GTTATTCAACAGGCTCAGTC+TGG | 0.446972 | tig0023654:-79688 | Msa1410440:CDS |
| GATCTACGCCGCGGAGTTGA+GGG | 0.454750 | tig0023654:+81842 | None:intergenic |
| CTTGTGATCTCAAGTGCCTC+AGG | 0.456300 | tig0023654:+78491 | None:intergenic |
| GCCATCTGCTATTCAGCAAA+GGG | 0.457115 | tig0023654:-79740 | Msa1410440:CDS |
| CATGTTGTGGTTGGTACTCC+TGG | 0.466328 | tig0023654:-79448 | Msa1410440:CDS |
| TGGAGACTATCTAGGTGTTA+AGG | 0.466474 | tig0023654:-79533 | Msa1410440:CDS |
| TGATGTCCAACAAGTGTCTC+TGG | 0.467134 | tig0023654:-78135 | Msa1410440:CDS |
| AAGCAACAGGGTAAGGTAAA+GGG | 0.468637 | tig0023654:+81920 | None:intergenic |
| CGTGAGTAGCTGAGACTGTA+TGG | 0.474930 | tig0023654:+78255 | None:intergenic |
| ATTGGTCGTAGTGGAAGGTT+TGG | 0.483022 | tig0023654:-78065 | Msa1410440:CDS |
| CTACAATGTGACTCAGTGCC+AGG | 0.484625 | tig0023654:-79617 | Msa1410440:CDS |
| GAGAAGGTTATGCGTGCGCT+TGG | 0.485297 | tig0023654:-79553 | Msa1410440:CDS |
| CAAGCAACAGGGTAAGGTAA+AGG | 0.487292 | tig0023654:+81919 | None:intergenic |
| AAAACAGCAACTTTCTGCTC+TGG | 0.488201 | tig0023654:-79658 | Msa1410440:CDS |
| TCTCTCAGGATTGCAGCTGA+TGG | 0.488638 | tig0023654:-80896 | Msa1410440:intron |
| CGTGCGCTTGGAGACTATCT+AGG | 0.494302 | tig0023654:-79541 | Msa1410440:CDS |
| CAAACATCTTGATGTAATCT+GGG | 0.495526 | tig0023654:+79389 | None:intergenic |
| ACACCAGGAGGAAAGTTGAT+TGG | 0.496681 | tig0023654:-78304 | Msa1410440:CDS |
| GAGGGGTCACAATTCGATGC+TGG | 0.497994 | tig0023654:-81052 | Msa1410440:CDS |
| TGAGAAAGAGGAGTGGAAGC+TGG | 0.499050 | tig0023654:-78384 | Msa1410440:CDS |
| CCCTCTCAGTCAACGCTAGT+TGG | 0.499173 | tig0023654:+81979 | None:intergenic |
| AGCATCGAATTGTGACCCCT+CGG | 0.501118 | tig0023654:+81054 | None:intergenic |
| GATAGTTCTCAGGCTGGGTA+GGG | 0.504928 | tig0023654:+78096 | None:intergenic |
| TGGAATGAGGGAAACGGAAA+AGG | 0.507036 | tig0023654:-82035 | Msa1410440:five_prime_UTR |
| AGTGGAAGGTTTGGTAGAAA+AGG | 0.507500 | tig0023654:-78056 | Msa1410440:CDS |
| ATCAAGTGGTGTTCATGTTG+TGG | 0.507583 | tig0023654:-79461 | Msa1410440:CDS |
| TTTAATAACTACCGATCTGT+TGG | 0.509076 | tig0023654:-78168 | Msa1410440:CDS |
| TAGCTGAGACTGTATGGTCT+CGG | 0.513297 | tig0023654:+78261 | None:intergenic |
| GGATCTACGCCGCGGAGTTG+AGG | 0.513351 | tig0023654:+81841 | None:intergenic |
| GATATCTTTCAGCTGCTGCC+AGG | 0.515537 | tig0023654:-78551 | Msa1410440:CDS |
| TAAAACCAAGCAACAGGGTA+AGG | 0.520451 | tig0023654:+81913 | None:intergenic |
| AGGGGTCACAATTCGATGCT+GGG | 0.520845 | tig0023654:-81051 | Msa1410440:CDS |
| CTCTGCTACAATGCCTCCTG+AGG | 0.521626 | tig0023654:-78507 | Msa1410440:CDS |
| GAGAACTATCTCCATCGTAT+TGG | 0.523557 | tig0023654:-78083 | Msa1410440:CDS |
| GCATCGAATTGTGACCCCTC+GGG | 0.523997 | tig0023654:+81055 | None:intergenic |
| GGAGTTAGTTAACGGAGTTA+GGG | 0.527772 | tig0023654:+81801 | None:intergenic |
| ATAGCGAGATACCTTGAAAG+TGG | 0.529238 | tig0023654:+81760 | None:intergenic |
| ATCGTATTGGTCGTAGTGGA+AGG | 0.529668 | tig0023654:-78070 | Msa1410440:CDS |
| AAAGCGACGGAGTTAGTTAA+CGG | 0.531964 | tig0023654:+81793 | None:intergenic |
| CCCCTTTGCTGAATAGCAGA+TGG | 0.532541 | tig0023654:+79739 | None:intergenic |
| TGCTGAGCAAGCTCACGAGT+TGG | 0.532963 | tig0023654:+79580 | None:intergenic |
| TTTGTCCTCCATATATTAGT+CGG | 0.533852 | tig0023654:-77915 | Msa1410440:three_prime_UTR |
| TTACATCAAGATGTTTGTGT+TGG | 0.535747 | tig0023654:-79383 | Msa1410440:CDS |
| GTTTGTTAGAGAATCTCCTC+AGG | 0.536968 | tig0023654:-80820 | Msa1410440:CDS |
| CAACCAATCAACTTTCCTCC+TGG | 0.537041 | tig0023654:+78301 | None:intergenic |
| CTCAGCTACTCACGGAGACA+TGG | 0.539056 | tig0023654:-78246 | Msa1410440:CDS |
| AACATCAAGTCCCTTGCAGA+AGG | 0.540831 | tig0023654:+79708 | None:intergenic |
| CTCCATCGTATTGGTCGTAG+TGG | 0.541717 | tig0023654:-78074 | Msa1410440:CDS |
| TTCACGCATAATAATGTCCC+TGG | 0.549331 | tig0023654:+78214 | None:intergenic |
| CGTGATGAGCTTACCTTAGA+GGG | 0.550253 | tig0023654:-78431 | Msa1410440:CDS |
| GACCAACGTATTCTATCAAG+TGG | 0.551798 | tig0023654:-79475 | Msa1410440:CDS |
| AGATAGTTCTCAGGCTGGGT+AGG | 0.552286 | tig0023654:+78095 | None:intergenic |
| ACCAACTAGCGTTGACTGAG+AGG | 0.554134 | tig0023654:-81980 | Msa1410440:five_prime_UTR |
| ATACGATGGAGATAGTTCTC+AGG | 0.557654 | tig0023654:+78086 | None:intergenic |
| CGCTTCACAAGGATCCTCAC+AGG | 0.561401 | tig0023654:+78452 | None:intergenic |
| CTGAGGCACTTGAGATCACA+AGG | 0.563772 | tig0023654:-78490 | Msa1410440:CDS |
| AGCATATCAAACACACGACC+AGG | 0.568622 | tig0023654:+79430 | None:intergenic |
| AGTGGTGTTCATGTTGTGGT+TGG | 0.573575 | tig0023654:-79457 | Msa1410440:CDS |
| AACAGGCTCAGTCTGGAACC+GGG | 0.573707 | tig0023654:-79681 | Msa1410440:CDS |
| ACTCCTACTTGAATCTTACC+TGG | 0.574870 | tig0023654:+78533 | None:intergenic |
| AGCCATCTGCTATTCAGCAA+AGG | 0.576198 | tig0023654:-79741 | Msa1410440:CDS |
| GATGGAGATAGTTCTCAGGC+TGG | 0.577660 | tig0023654:+78090 | None:intergenic |
| ATGGCTGGACTTGCACCCGA+GGG | 0.585147 | tig0023654:-81070 | Msa1410440:CDS |
| AACTCCGCGGCGTAGATCCG+GGG | 0.585487 | tig0023654:-81837 | Msa1410440:five_prime_UTR |
| ATTCTGGACTTCTTATGATG+AGG | 0.585617 | tig0023654:-80867 | Msa1410440:CDS |
| AGTTCTCAGGCTGGGTAGGG+AGG | 0.588214 | tig0023654:+78099 | None:intergenic |
| CAAGATGTTTGTGTTGGATG+AGG | 0.589017 | tig0023654:-79377 | Msa1410440:CDS |
| TTGGAGCTAAAACCAAGGCC+TGG | 0.589196 | tig0023654:+79599 | None:intergenic |
| TTTGTCACGAAGGAAGATGA+AGG | 0.595012 | tig0023654:-78020 | Msa1410440:CDS |
| TATGGCTGGACTTGCACCCG+AGG | 0.596497 | tig0023654:-81071 | Msa1410440:CDS |
| CCAACTAGCGTTGACTGAGA+GGG | 0.600177 | tig0023654:-81979 | Msa1410440:five_prime_UTR |
| GCTGATGAAATGCTTTCTCG+AGG | 0.601323 | tig0023654:-79355 | Msa1410440:CDS |
| GAGACATGGATCAAAATACC+AGG | 0.602543 | tig0023654:-78232 | Msa1410440:CDS |
| CTGCCAGGTAAGATTCAAGT+AGG | 0.602744 | tig0023654:-78536 | Msa1410440:CDS |
| GCTTGCTCAGCAGATTGAGA+AGG | 0.608979 | tig0023654:-79569 | Msa1410440:CDS |
| GGGGATAGTTCCCTTCTGCA+AGG | 0.611798 | tig0023654:-79719 | Msa1410440:CDS |
| GGGATAGTTCCCTTCTGCAA+GGG | 0.612393 | tig0023654:-79718 | Msa1410440:CDS |
| ATGGAGATAGTTCTCAGGCT+GGG | 0.613686 | tig0023654:+78091 | None:intergenic |
| ACATCAAGTCCCTTGCAGAA+GGG | 0.620896 | tig0023654:+79709 | None:intergenic |
| CAACTAGCGTTGACTGAGAG+GGG | 0.630133 | tig0023654:-81978 | Msa1410440:five_prime_UTR |
| TTTGTTAGAGAATCTCCTCA+GGG | 0.631297 | tig0023654:-80819 | Msa1410440:CDS |
| AAGGTGCATGCTTGTGTCGG+AGG | 0.632831 | tig0023654:-79514 | Msa1410440:CDS |
| ACTACCGATCTGTTGGCTCG+TGG | 0.635749 | tig0023654:-78161 | Msa1410440:CDS |
| TTCCACTACGACCAATACGA+TGG | 0.638034 | tig0023654:+78072 | None:intergenic |
| TAAGCTCATCACGCTTCACA+AGG | 0.638139 | tig0023654:+78441 | None:intergenic |
| TCAATGTTGAGAAAGAGGAG+TGG | 0.638471 | tig0023654:-78391 | Msa1410440:CDS |
| AGTTGTCTGAATATCGGGGT+AGG | 0.638841 | tig0023654:-77773 | Msa1410440:three_prime_UTR |
| GTGATCTCAAGTGCCTCAGG+AGG | 0.642550 | tig0023654:+78494 | None:intergenic |
| TGCCATTAACTTTGTCACGA+AGG | 0.643459 | tig0023654:-78030 | Msa1410440:CDS |
| GTTAAGGTGCATGCTTGTGT+CGG | 0.644815 | tig0023654:-79517 | Msa1410440:CDS |
| ACGAGTTGGAGCTAAAACCA+AGG | 0.644823 | tig0023654:+79594 | None:intergenic |
| TGGATTAAACCGAAAAGCGA+CGG | 0.648057 | tig0023654:+81780 | None:intergenic |
| AAACACGAGAAGACCCAGAA+CGG | 0.652225 | tig0023654:+78189 | None:intergenic |
| TTGAAGTTGTCTGAATATCG+GGG | 0.659994 | tig0023654:-77777 | Msa1410440:three_prime_UTR |
| CATACAGTCTCAGCTACTCA+CGG | 0.666004 | tig0023654:-78254 | Msa1410440:CDS |
| TACGATAAAACCAAGCAACA+GGG | 0.666972 | tig0023654:+81908 | None:intergenic |
| AATTTCCGACTAATATATGG+AGG | 0.667446 | tig0023654:+77910 | None:intergenic |
| CATCTGCTATTCAGCAAAGG+GGG | 0.672902 | tig0023654:-79738 | Msa1410440:CDS |
| AATACCACGAGCCAACAGAT+CGG | 0.674449 | tig0023654:+78157 | None:intergenic |
| TGGCTGGACTTGCACCCGAG+GGG | 0.685827 | tig0023654:-81069 | Msa1410440:CDS |
| CCATCTGCTATTCAGCAAAG+GGG | 0.689569 | tig0023654:-79739 | Msa1410440:CDS |
| CACCACTTGATAGAATACGT+TGG | 0.711575 | tig0023654:+79473 | None:intergenic |
| AGACATGGATCAAAATACCA+GGG | 0.718305 | tig0023654:-78231 | Msa1410440:CDS |
| CATATGCATAAATGCCCCTG+AGG | 0.718966 | tig0023654:+80804 | None:intergenic |
| AACTCCCCGGATCTACGCCG+CGG | 0.720835 | tig0023654:+81833 | None:intergenic |
| AATTGTGTGATGAGACGTAG+TGG | 0.741003 | tig0023654:-77595 | Msa1410440:three_prime_UTR |
| TTGTTAGAGAATCTCCTCAG+GGG | 0.744236 | tig0023654:-80818 | Msa1410440:CDS |
| AGTTTATGAACAAACCTGTG+AGG | 0.746705 | tig0023654:-78466 | Msa1410440:CDS |
| GAGTTGAGGGATGAAAACGA+AGG | 0.764414 | tig0023654:+81855 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTAAAAATTCAAAATATA+TGG | - | tig0023654:79733-79752 | Msa1410440:CDS | 10.0% |
| !! | TAAAATAAGATAGAAATAGT+TGG | + | tig0023654:78024-78043 | None:intergenic | 15.0% |
| !!! | TAGTTACAACATTTTTTTTT+TGG | + | tig0023654:79476-79495 | None:intergenic | 15.0% |
| !! | TATGTTATAACTGTTATGTT+AGG | - | tig0023654:78207-78226 | Msa1410440:CDS | 20.0% |
| !! | TAGTACATGAAAAAAATGAA+GGG | + | tig0023654:78609-78628 | None:intergenic | 20.0% |
| !!! | TGTTTTAATGTAGGAATTTT+TGG | - | tig0023654:78632-78651 | Msa1410440:intron | 20.0% |
| !! | TGAAATCATTATTACTAGTT+TGG | - | tig0023654:78661-78680 | Msa1410440:intron | 20.0% |
| !! | TATATTGTTCTTAATGTCTT+TGG | - | tig0023654:78843-78862 | Msa1410440:intron | 20.0% |
| !! | GAAAAAGAGACTTATAAAAA+GGG | + | tig0023654:78915-78934 | None:intergenic | 20.0% |
| !! | TGAAAAAGAGACTTATAAAA+AGG | + | tig0023654:78916-78935 | None:intergenic | 20.0% |
| !! | TCACATATATTGAGAAAAAT+TGG | - | tig0023654:78940-78959 | Msa1410440:intron | 20.0% |
| !!! | TTTTTGAATTAAGACTACAA+GGG | + | tig0023654:79238-79257 | None:intergenic | 20.0% |
| !!! | TTTTTTGAATTAAGACTACA+AGG | + | tig0023654:79239-79258 | None:intergenic | 20.0% |
| !!! | TTGAATTTTTAAGAGTACAA+CGG | + | tig0023654:79727-79746 | None:intergenic | 20.0% |
| !! | TACAACAATTATGAAATAGA+TGG | + | tig0023654:80289-80308 | None:intergenic | 20.0% |
| !!! | TTAAGTGTTTTGTTTCTTTT+TGG | - | tig0023654:80512-80531 | Msa1410440:intron | 20.0% |
| !!! | TAAGAATTTAACCTTTTTTC+TGG | - | tig0023654:80942-80961 | Msa1410440:intron | 20.0% |
| ! | TGAAAGTGAAATATGAAAGA+TGG | + | tig0023654:77878-77897 | None:intergenic | 25.0% |
| !!! | TGTTTCATGTTTTAACTGTT+AGG | - | tig0023654:78085-78104 | Msa1410440:CDS | 25.0% |
| !!! | TTTGTGTTGTTTTATACTGT+TGG | - | tig0023654:78133-78152 | Msa1410440:CDS | 25.0% |
| !!! | TTGTGTTGTTTTATACTGTT+GGG | - | tig0023654:78134-78153 | Msa1410440:CDS | 25.0% |
| ! | TCTCACTTATGTAATTTAGT+CGG | + | tig0023654:78263-78282 | None:intergenic | 25.0% |
| ! | ATTACATAAGTGAGACAATT+TGG | - | tig0023654:78268-78287 | Msa1410440:CDS | 25.0% |
| ! | TTACATAAGTGAGACAATTT+GGG | - | tig0023654:78269-78288 | Msa1410440:CDS | 25.0% |
| ! | TTCAAGATAGCTTATGAAAA+TGG | - | tig0023654:78335-78354 | Msa1410440:CDS | 25.0% |
| ! | CTAGTACATGAAAAAAATGA+AGG | + | tig0023654:78610-78629 | None:intergenic | 25.0% |
| !!! | GTACTAGTTTGTTTTAATGT+AGG | - | tig0023654:78623-78642 | Msa1410440:intron | 25.0% |
| !!! | GTTTGGTTACCTTTTTTTTA+TGG | - | tig0023654:78678-78697 | Msa1410440:intron | 25.0% |
| ! | GAGAAAAAGCCATAAAAAAA+AGG | + | tig0023654:78690-78709 | None:intergenic | 25.0% |
| !!! | TTATGATAGTTTTGATGCTA+TGG | - | tig0023654:78759-78778 | Msa1410440:intron | 25.0% |
| !!! | TATGATAGTTTTGATGCTAT+GGG | - | tig0023654:78760-78779 | Msa1410440:intron | 25.0% |
| !! | AGAGAATAACAATATTTTCC+AGG | + | tig0023654:78881-78900 | None:intergenic | 25.0% |
| !! | AATATTGTTATTCTCTGTCA+TGG | - | tig0023654:78885-78904 | Msa1410440:intron | 25.0% |
| !!! | CAGTTTGCTAAAAAAAATAG+TGG | + | tig0023654:79413-79432 | None:intergenic | 25.0% |
| ! | GTGCATAACTAATTAACTAT+TGG | - | tig0023654:79509-79528 | Msa1410440:CDS | 25.0% |
| ! | TTTGAAAGATGCCTTATATT+TGG | - | tig0023654:79645-79664 | Msa1410440:CDS | 25.0% |
| ! | TTGAAAGATGCCTTATATTT+GGG | - | tig0023654:79646-79665 | Msa1410440:CDS | 25.0% |
| ! | GACTAATTATAAGGACAATT+TGG | + | tig0023654:79684-79703 | None:intergenic | 25.0% |
| ! | ATTGTCCTTATAATTAGTCA+TGG | - | tig0023654:79685-79704 | Msa1410440:CDS | 25.0% |
| !!! | TATTGTTTTTTTCTCTACGA+TGG | - | tig0023654:79793-79812 | Msa1410440:intron | 25.0% |
| !!! | ATTGTTTTTTTCTCTACGAT+GGG | - | tig0023654:79794-79813 | Msa1410440:intron | 25.0% |
| ! | GTAATTGACAAAAGTGAAAA+AGG | + | tig0023654:80314-80333 | None:intergenic | 25.0% |
| ! | ACATAAAAAAACAACACAGA+AGG | + | tig0023654:80340-80359 | None:intergenic | 25.0% |
| ! | AAAAGTAAAAAGACAAGTGT+GGG | + | tig0023654:80369-80388 | None:intergenic | 25.0% |
| ! | ATGAAGCAGAAATAAGAAAA+TGG | + | tig0023654:80472-80491 | None:intergenic | 25.0% |
| !!! | GTTTCTTTTTGGAATTTTGA+CGG | - | tig0023654:80523-80542 | Msa1410440:intron | 25.0% |
| !!! | TTTCTTTTTGGAATTTTGAC+GGG | - | tig0023654:80524-80543 | Msa1410440:intron | 25.0% |
| ! | GAAACTAAAAAATGAATTCG+GGG | + | tig0023654:80724-80743 | None:intergenic | 25.0% |
| ! | GGAAACTAAAAAATGAATTC+GGG | + | tig0023654:80725-80744 | None:intergenic | 25.0% |
| ! | GGGAAACTAAAAAATGAATT+CGG | + | tig0023654:80726-80745 | None:intergenic | 25.0% |
| !! | CAAAAGTAAAGTGTTTGTTT+GGG | + | tig0023654:80862-80881 | None:intergenic | 25.0% |
| ! | ACTAATTTCCGACTAATATA+TGG | + | tig0023654:81698-81717 | None:intergenic | 25.0% |
| ! | AGCAGAAATAAAACCAAAAA+GGG | + | tig0023654:81760-81779 | None:intergenic | 25.0% |
| ! | AAGCAGAAATAAAACCAAAA+AGG | + | tig0023654:81761-81780 | None:intergenic | 25.0% |
| !!! | TTTTGAAGTTGTCTGAATAT+CGG | - | tig0023654:81823-81842 | Msa1410440:five_prime_UTR | 25.0% |
| ! | TGCATTGTTGAATTCATTAT+TGG | - | tig0023654:81856-81875 | Msa1410440:five_prime_UTR | 25.0% |
| ! | AAAGACGACACTTGTTAAAA+TGG | - | tig0023654:77538-77557 | Msa1410440:three_prime_UTR | 30.0% |
| !! | GACACTTGTTAAAATGGTTT+TGG | - | tig0023654:77544-77563 | Msa1410440:three_prime_UTR | 30.0% |
| !!! | ACTTGTTAAAATGGTTTTGG+TGG | - | tig0023654:77547-77566 | Msa1410440:three_prime_UTR | 30.0% |
| AAATAGTTGGAAAAGCAAAG+AGG | + | tig0023654:78011-78030 | None:intergenic | 30.0% | |
| !!! | CATGTTTTAACTGTTAGGTT+AGG | - | tig0023654:78090-78109 | Msa1410440:CDS | 30.0% |
| !! | TTGTTTTATACTGTTGGGTT+AGG | - | tig0023654:78139-78158 | Msa1410440:CDS | 30.0% |
| !! | TGTTATGTTAGGTTAGCTTT+AGG | - | tig0023654:78218-78237 | Msa1410440:CDS | 30.0% |
| !! | GTTATGTTAGGTTAGCTTTA+GGG | - | tig0023654:78219-78238 | Msa1410440:CDS | 30.0% |
| AAACAACTTATTTGCAGGAA+TGG | + | tig0023654:78441-78460 | None:intergenic | 30.0% | |
| !! | TTTTTATGGCTTTTTCTCTC+AGG | - | tig0023654:78692-78711 | Msa1410440:intron | 30.0% |
| ! | TATTTTCCAGGTGTAAGTAA+AGG | + | tig0023654:78869-78888 | None:intergenic | 30.0% |
| ! | TGTGGAAACATTTTATGTGT+TGG | - | tig0023654:78991-79010 | Msa1410440:intron | 30.0% |
| ! | GTGGAAACATTTTATGTGTT+GGG | - | tig0023654:78992-79011 | Msa1410440:intron | 30.0% |
| AGTGAATGATTGTTACCAAA+CGG | + | tig0023654:79123-79142 | None:intergenic | 30.0% | |
| TTGGTTGAATTTGTAGTGTT+TGG | + | tig0023654:79325-79344 | None:intergenic | 30.0% | |
| TGAAAGATGCCTTATATTTG+GGG | - | tig0023654:79647-79666 | Msa1410440:CDS | 30.0% | |
| TCCTTATAATTAGTCATGGA+AGG | - | tig0023654:79689-79708 | Msa1410440:CDS | 30.0% | |
| TCCTTCCATGACTAATTATA+AGG | + | tig0023654:79693-79712 | None:intergenic | 30.0% | |
| ! | TAGACACTTTCTGTTTTCTT+TGG | - | tig0023654:79770-79789 | Msa1410440:intron | 30.0% |
| CAAACATCTTGATGTAATCT+GGG | + | tig0023654:80216-80235 | None:intergenic | 30.0% | |
| ACAAACATCTTGATGTAATC+TGG | + | tig0023654:80217-80236 | None:intergenic | 30.0% | |
| TTACATCAAGATGTTTGTGT+TGG | - | tig0023654:80219-80238 | Msa1410440:intron | 30.0% | |
| GAAAAGTAAAAAGACAAGTG+TGG | + | tig0023654:80370-80389 | None:intergenic | 30.0% | |
| TGAGAGTAGTATAACAAGAT+AGG | - | tig0023654:80651-80670 | Msa1410440:intron | 30.0% | |
| !!! | GAGGTTAATTTTTTCTCAAC+AGG | + | tig0023654:80770-80789 | None:intergenic | 30.0% |
| AAAAAATTAACCTCCATGCA+AGG | - | tig0023654:80776-80795 | Msa1410440:intron | 30.0% | |
| ! | CCAAAAGTAAAGTGTTTGTT+TGG | + | tig0023654:80863-80882 | None:intergenic | 30.0% |
| ! | CCAAACAAACACTTTACTTT+TGG | - | tig0023654:80860-80879 | Msa1410440:CDS | 30.0% |
| AATATGACTACAGACCAATA+AGG | + | tig0023654:80968-80987 | None:intergenic | 30.0% | |
| ATCTGATAACAAAAAAGCCA+AGG | + | tig0023654:81027-81046 | None:intergenic | 30.0% | |
| TTATGTCAATGTTGAGAAAG+AGG | - | tig0023654:81206-81225 | Msa1410440:intron | 30.0% | |
| TTTAATAACTACCGATCTGT+TGG | - | tig0023654:81434-81453 | Msa1410440:intron | 30.0% | |
| CTAACACATTGTAAAACTTC+TGG | + | tig0023654:81623-81642 | None:intergenic | 30.0% | |
| ! | GTTTTACAATGTGTTAGTTG+AGG | - | tig0023654:81626-81645 | Msa1410440:intron | 30.0% |
| TTTGTCCTCCATATATTAGT+CGG | - | tig0023654:81687-81706 | Msa1410440:intron | 30.0% | |
| AATTTCCGACTAATATATGG+AGG | + | tig0023654:81695-81714 | None:intergenic | 30.0% | |
| ! | TAGTCGGAAATTAGTACTTT+TGG | - | tig0023654:81703-81722 | Msa1410440:intron | 30.0% |
| AAATAAAACCAAAAAGGGGA+GGG | + | tig0023654:81755-81774 | None:intergenic | 30.0% | |
| GCAGAAATAAAACCAAAAAG+GGG | + | tig0023654:81759-81778 | None:intergenic | 30.0% | |
| ! | TTTGAAGTTGTCTGAATATC+GGG | - | tig0023654:81824-81843 | Msa1410440:five_prime_UTR | 30.0% |
| GAATTCATTATTGGCCAAAT+TGG | - | tig0023654:81865-81884 | Msa1410440:five_prime_UTR | 30.0% | |
| !! | CACTCTTACTTATTTCTAGA+AGG | - | tig0023654:81899-81918 | Msa1410440:five_prime_UTR | 30.0% |
| CATAATATCAACGAGTCTAA+TGG | + | tig0023654:82033-82052 | None:intergenic | 30.0% | |
| !!! | AAAATGGTTTTGGTGGAATG+AGG | - | tig0023654:77554-77573 | Msa1410440:three_prime_UTR | 35.0% |
| !!! | AAATGGTTTTGGTGGAATGA+GGG | - | tig0023654:77555-77574 | Msa1410440:three_prime_UTR | 35.0% |
| TACGATAAAACCAAGCAACA+GGG | + | tig0023654:77697-77716 | None:intergenic | 35.0% | |
| ATACGATAAAACCAAGCAAC+AGG | + | tig0023654:77698-77717 | None:intergenic | 35.0% | |
| TTCGGTTTAATCCACTTTCA+AGG | - | tig0023654:77831-77850 | Msa1410440:three_prime_UTR | 35.0% | |
| TGGCTAAACAACTTATTTGC+AGG | + | tig0023654:78446-78465 | None:intergenic | 35.0% | |
| !! | CTGTTTCTATCTTGCAGTTA+TGG | - | tig0023654:78513-78532 | Msa1410440:CDS | 35.0% |
| ATTCTGGACTTCTTATGATG+AGG | - | tig0023654:78735-78754 | Msa1410440:intron | 35.0% | |
| TTTGTTAGAGAATCTCCTCA+GGG | - | tig0023654:78783-78802 | Msa1410440:intron | 35.0% | |
| ! | ACATTTTATGTGTTGGGATG+TGG | - | tig0023654:78998-79017 | Msa1410440:intron | 35.0% |
| ! | CATTTTATGTGTTGGGATGT+GGG | - | tig0023654:78999-79018 | Msa1410440:intron | 35.0% |
| GTGAATGATTGTTACCAAAC+GGG | + | tig0023654:79122-79141 | None:intergenic | 35.0% | |
| CTTGTAAGGTAGCTAGTTAA+CGG | + | tig0023654:79360-79379 | None:intergenic | 35.0% | |
| AACAAAACACACATGCACTA+AGG | + | tig0023654:79438-79457 | None:intergenic | 35.0% | |
| GGAAGAAGAAAAGTCAATGT+TGG | + | tig0023654:79560-79579 | None:intergenic | 35.0% | |
| !! | TTGATGCTACTGATTTGTCT+TGG | + | tig0023654:79581-79600 | None:intergenic | 35.0% |
| GAAAGATGCCTTATATTTGG+GGG | - | tig0023654:79648-79667 | Msa1410440:CDS | 35.0% | |
| !! | AAAAAGTGCCCCCAAATATA+AGG | + | tig0023654:79659-79678 | None:intergenic | 35.0% |
| ACACTTAACAGAGCTGAAAA+TGG | + | tig0023654:80500-80519 | None:intergenic | 35.0% | |
| GAGTAGTATAACAAGATAGG+AGG | - | tig0023654:80654-80673 | Msa1410440:intron | 35.0% | |
| ATAACAAGATAGGAGGATCT+AGG | - | tig0023654:80661-80680 | Msa1410440:intron | 35.0% | |
| TAACAAGATAGGAGGATCTA+GGG | - | tig0023654:80662-80681 | Msa1410440:intron | 35.0% | |
| AGGAATTCGGATAATTATGG+AGG | + | tig0023654:80701-80720 | None:intergenic | 35.0% | |
| ACTAAAAAATGAATTCGGGG+AGG | + | tig0023654:80721-80740 | None:intergenic | 35.0% | |
| !!! | TTTTTAGTTTCCCCAACTTG+TGG | - | tig0023654:80733-80752 | Msa1410440:intron | 35.0% |
| !!! | TTTTAGTTTCCCCAACTTGT+GGG | - | tig0023654:80734-80753 | Msa1410440:intron | 35.0% |
| ! | AAGTAAAGTGTTTGTTTGGG+AGG | + | tig0023654:80859-80878 | None:intergenic | 35.0% |
| !!! | AACCTTTTTTCTGGCCTTAT+TGG | - | tig0023654:80951-80970 | Msa1410440:intron | 35.0% |
| TGATAACAAAAAAGCCAAGG+AGG | + | tig0023654:81024-81043 | None:intergenic | 35.0% | |
| AGTTTATGAACAAACCTGTG+AGG | - | tig0023654:81136-81155 | Msa1410440:intron | 35.0% | |
| AAACTGCTTAATACCCTCTA+AGG | + | tig0023654:81187-81206 | None:intergenic | 35.0% | |
| AAAAATGACACTCTGAGTGA+TGG | + | tig0023654:81274-81293 | None:intergenic | 35.0% | |
| AGACATGGATCAAAATACCA+GGG | - | tig0023654:81371-81390 | Msa1410440:intron | 35.0% | |
| TTATAACCAGAGACACTTGT+TGG | + | tig0023654:81476-81495 | None:intergenic | 35.0% | |
| TTCCTTCGTGACAAAGTTAA+TGG | + | tig0023654:81577-81596 | None:intergenic | 35.0% | |
| GAAATAAAACCAAAAAGGGG+AGG | + | tig0023654:81756-81775 | None:intergenic | 35.0% | |
| ! | CTTTGTCTGTTTGATAGTCT+TGG | - | tig0023654:81786-81805 | Msa1410440:five_prime_UTR | 35.0% |
| TTGAAGTTGTCTGAATATCG+GGG | - | tig0023654:81825-81844 | Msa1410440:five_prime_UTR | 35.0% | |
| ! | TTTTGGTGGAATGAGGGAAA+CGG | - | tig0023654:77561-77580 | Msa1410440:three_prime_UTR | 40.0% |
| TTGACTGAGAGGGGTAAATT+AGG | - | tig0023654:77633-77652 | Msa1410440:three_prime_UTR | 40.0% | |
| AAGCAACAGGGTAAGGTAAA+GGG | + | tig0023654:77685-77704 | None:intergenic | 40.0% | |
| TAAAACCAAGCAACAGGGTA+AGG | + | tig0023654:77692-77711 | None:intergenic | 40.0% | |
| GGAGTTAGTTAACGGAGTTA+GGG | + | tig0023654:77804-77823 | None:intergenic | 40.0% | |
| AAAGCGACGGAGTTAGTTAA+CGG | + | tig0023654:77812-77831 | None:intergenic | 40.0% | |
| !!! | TAACTAACTCCGTCGCTTTT+CGG | - | tig0023654:77813-77832 | Msa1410440:three_prime_UTR | 40.0% |
| TGGATTAAACCGAAAAGCGA+CGG | + | tig0023654:77825-77844 | None:intergenic | 40.0% | |
| ATAGCGAGATACCTTGAAAG+TGG | + | tig0023654:77845-77864 | None:intergenic | 40.0% | |
| TTTCACTTTCATCGCGACAA+TGG | - | tig0023654:77887-77906 | Msa1410440:three_prime_UTR | 40.0% | |
| AGACAATTTGGGCAAACGTA+TGG | - | tig0023654:78280-78299 | Msa1410440:CDS | 40.0% | |
| TTCTATCTTGCAGTTATGGC+TGG | - | tig0023654:78517-78536 | Msa1410440:CDS | 40.0% | |
| ! | GTTTGTTAGAGAATCTCCTC+AGG | - | tig0023654:78782-78801 | Msa1410440:intron | 40.0% |
| TTGTTAGAGAATCTCCTCAG+GGG | - | tig0023654:78784-78803 | Msa1410440:intron | 40.0% | |
| !! | TGGTAGAAGTGTTCCTTAGA+CGG | - | tig0023654:78960-78979 | Msa1410440:intron | 40.0% |
| AGTGTTCCTTAGACGGTAAA+AGG | - | tig0023654:78967-78986 | Msa1410440:intron | 40.0% | |
| ATGACGAAAAATGACCCGTT+TGG | - | tig0023654:79105-79124 | Msa1410440:intron | 40.0% | |
| ! | CTAATAGCGGAAGACTTGTA+AGG | + | tig0023654:79374-79393 | None:intergenic | 40.0% |
| GCTGTTAAGCTAGCTAATAG+CGG | + | tig0023654:79387-79406 | None:intergenic | 40.0% | |
| ACTAGTATGACTCGTGCTTT+AGG | - | tig0023654:79830-79849 | Msa1410440:intron | 40.0% | |
| GGGACTTGATGTTATTCAAC+AGG | - | tig0023654:79904-79923 | Msa1410440:intron | 40.0% | |
| AAAACAGCAACTTTCTGCTC+TGG | - | tig0023654:79944-79963 | Msa1410440:intron | 40.0% | |
| ! | TCACATTGTAGTCAAGTTGC+TGG | + | tig0023654:79976-79995 | None:intergenic | 40.0% |
| TGGAGACTATCTAGGTGTTA+AGG | - | tig0023654:80069-80088 | Msa1410440:intron | 40.0% | |
| GACCAACGTATTCTATCAAG+TGG | - | tig0023654:80127-80146 | Msa1410440:intron | 40.0% | |
| CACCACTTGATAGAATACGT+TGG | + | tig0023654:80132-80151 | None:intergenic | 40.0% | |
| ATCAAGTGGTGTTCATGTTG+TGG | - | tig0023654:80141-80160 | Msa1410440:intron | 40.0% | |
| CAAGATGTTTGTGTTGGATG+AGG | - | tig0023654:80225-80244 | Msa1410440:intron | 40.0% | |
| TTCTCGAGGTTTCAAAGATC+AGG | - | tig0023654:80261-80280 | Msa1410440:intron | 40.0% | |
| !!! | GGCTCACCTATTTTTGGATT+GGG | - | tig0023654:80573-80592 | Msa1410440:intron | 40.0% |
| CACACTCCCAATCCAAAAAT+AGG | + | tig0023654:80582-80601 | None:intergenic | 40.0% | |
| !! | TTGGATTGGGAGTGTGTTTT+TGG | - | tig0023654:80586-80605 | Msa1410440:intron | 40.0% |
| AACAAGATAGGAGGATCTAG+GGG | - | tig0023654:80663-80682 | Msa1410440:intron | 40.0% | |
| GGGAGGAATTCGGATAATTA+TGG | + | tig0023654:80704-80723 | None:intergenic | 40.0% | |
| AATGAATTCGGGGAGGAATT+CGG | + | tig0023654:80714-80733 | None:intergenic | 40.0% | |
| ! | TTTAGTTTCCCCAACTTGTG+GGG | - | tig0023654:80735-80754 | Msa1410440:intron | 40.0% |
| AAATTAACCTCCATGCAAGG+TGG | - | tig0023654:80779-80798 | Msa1410440:intron | 40.0% | |
| AATTAACCTCCATGCAAGGT+GGG | - | tig0023654:80780-80799 | Msa1410440:intron | 40.0% | |
| AAAGAGGAAGAGAAGGGAAA+TGG | + | tig0023654:80821-80840 | None:intergenic | 40.0% | |
| GACCAATAAGGCCAGAAAAA+AGG | + | tig0023654:80956-80975 | None:intergenic | 40.0% | |
| AAAAGCCAAGGAGGTTAAAG+CGG | + | tig0023654:81015-81034 | None:intergenic | 40.0% | |
| ACTCCTACTTGAATCTTACC+TGG | + | tig0023654:81072-81091 | None:intergenic | 40.0% | |
| TCAATGTTGAGAAAGAGGAG+TGG | - | tig0023654:81211-81230 | Msa1410440:intron | 40.0% | |
| !!! | GTGTCATTTTTGTGAACACC+AGG | - | tig0023654:81283-81302 | Msa1410440:intron | 40.0% |
| !! | TCATTTTTGTGAACACCAGG+AGG | - | tig0023654:81286-81305 | Msa1410440:intron | 40.0% |
| GAGACATGGATCAAAATACC+AGG | - | tig0023654:81370-81389 | Msa1410440:intron | 40.0% | |
| TTCACGCATAATAATGTCCC+TGG | + | tig0023654:81391-81410 | None:intergenic | 40.0% | |
| ATTATGCGTGAATTCCGTTC+TGG | - | tig0023654:81399-81418 | Msa1410440:intron | 40.0% | |
| TTATGCGTGAATTCCGTTCT+GGG | - | tig0023654:81400-81419 | Msa1410440:intron | 40.0% | |
| ATACGATGGAGATAGTTCTC+AGG | + | tig0023654:81519-81538 | None:intergenic | 40.0% | |
| GAGAACTATCTCCATCGTAT+TGG | - | tig0023654:81519-81538 | Msa1410440:intron | 40.0% | |
| ! | AGTGGAAGGTTTGGTAGAAA+AGG | - | tig0023654:81546-81565 | Msa1410440:intron | 40.0% |
| TGCCATTAACTTTGTCACGA+AGG | - | tig0023654:81572-81591 | Msa1410440:intron | 40.0% | |
| TTTGTCACGAAGGAAGATGA+AGG | - | tig0023654:81582-81601 | Msa1410440:intron | 40.0% | |
| AGAAGCTCAGCAACATTTGA+TGG | + | tig0023654:81657-81676 | None:intergenic | 40.0% | |
| GTGAGTGTCTAACACCAATT+TGG | + | tig0023654:81882-81901 | None:intergenic | 40.0% | |
| AATTGTGTGATGAGACGTAG+TGG | - | tig0023654:82007-82026 | Msa1410440:five_prime_UTR | 40.0% | |
| TGGAATGAGGGAAACGGAAA+AGG | - | tig0023654:77567-77586 | Msa1410440:three_prime_UTR | 45.0% | |
| CGCTAGTTGGTCAAACTAAC+TGG | + | tig0023654:77613-77632 | None:intergenic | 45.0% | |
| CAAGCAACAGGGTAAGGTAA+AGG | + | tig0023654:77686-77705 | None:intergenic | 45.0% | |
| CTTTACCTTACCCTGTTGCT+TGG | - | tig0023654:77684-77703 | Msa1410440:three_prime_UTR | 45.0% | |
| GAGTTGAGGGATGAAAACGA+AGG | + | tig0023654:77750-77769 | None:intergenic | 45.0% | |
| CGGAGTTAGTTAACGGAGTT+AGG | + | tig0023654:77805-77824 | None:intergenic | 45.0% | |
| AGCACGAGTAAGGAGTTGTT+TGG | + | tig0023654:78466-78485 | None:intergenic | 45.0% | |
| CAACAAGATCAGCACGAGTA+AGG | + | tig0023654:78476-78495 | None:intergenic | 45.0% | |
| CAGCTGATGGAGATGAATTC+TGG | - | tig0023654:78719-78738 | Msa1410440:intron | 45.0% | |
| CATATGCATAAATGCCCCTG+AGG | + | tig0023654:78801-78820 | None:intergenic | 45.0% | |
| !! | CTCAGGGGCATTTATGCATA+TGG | - | tig0023654:78799-78818 | Msa1410440:intron | 45.0% |
| ! | CTTTGGCCTTTACTTACACC+TGG | - | tig0023654:78860-78879 | Msa1410440:intron | 45.0% |
| ! | CCACAACCTTTTACCGTCTA+AGG | + | tig0023654:78976-78995 | None:intergenic | 45.0% |
| CCTTAGACGGTAAAAGGTTG+TGG | - | tig0023654:78973-78992 | Msa1410440:intron | 45.0% | |
| TACCCCAATTCTCTGCACTT+AGG | - | tig0023654:79035-79054 | Msa1410440:intron | 45.0% | |
| ACCCCAATTCTCTGCACTTA+GGG | - | tig0023654:79036-79055 | Msa1410440:intron | 45.0% | |
| ACCCTAAGTGCAGAGAATTG+GGG | + | tig0023654:79040-79059 | None:intergenic | 45.0% | |
| GACCCTAAGTGCAGAGAATT+GGG | + | tig0023654:79041-79060 | None:intergenic | 45.0% | |
| AGACCCTAAGTGCAGAGAAT+TGG | + | tig0023654:79042-79061 | None:intergenic | 45.0% | |
| GTAAGGTAGCTAGTTAACGG+CGG | + | tig0023654:79357-79376 | None:intergenic | 45.0% | |
| AGCCATCTGCTATTCAGCAA+AGG | - | tig0023654:79861-79880 | Msa1410440:intron | 45.0% | |
| GCCATCTGCTATTCAGCAAA+GGG | - | tig0023654:79862-79881 | Msa1410440:intron | 45.0% | |
| CCATCTGCTATTCAGCAAAG+GGG | - | tig0023654:79863-79882 | Msa1410440:intron | 45.0% | |
| CATCTGCTATTCAGCAAAGG+GGG | - | tig0023654:79864-79883 | Msa1410440:intron | 45.0% | |
| ACATCAAGTCCCTTGCAGAA+GGG | + | tig0023654:79896-79915 | None:intergenic | 45.0% | |
| AACATCAAGTCCCTTGCAGA+AGG | + | tig0023654:79897-79916 | None:intergenic | 45.0% | |
| GTTATTCAACAGGCTCAGTC+TGG | - | tig0023654:79914-79933 | Msa1410440:intron | 45.0% | |
| !!! | GCAGAAAGTTGCTGTTTTCC+CGG | + | tig0023654:79942-79961 | None:intergenic | 45.0% |
| ! | ACGAGTTGGAGCTAAAACCA+AGG | + | tig0023654:80011-80030 | None:intergenic | 45.0% |
| GTTAAGGTGCATGCTTGTGT+CGG | - | tig0023654:80085-80104 | Msa1410440:intron | 45.0% | |
| AGTGGTGTTCATGTTGTGGT+TGG | - | tig0023654:80145-80164 | Msa1410440:intron | 45.0% | |
| AGCATATCAAACACACGACC+AGG | + | tig0023654:80175-80194 | None:intergenic | 45.0% | |
| GCTGATGAAATGCTTTCTCG+AGG | - | tig0023654:80247-80266 | Msa1410440:intron | 45.0% | |
| !!! | GGGCTCACCTATTTTTGGAT+TGG | - | tig0023654:80572-80591 | Msa1410440:intron | 45.0% |
| !!! | GATTGGGAGTGTGTTTTTGG+AGG | - | tig0023654:80589-80608 | Msa1410440:intron | 45.0% |
| ATTAACCTCCATGCAAGGTG+GGG | - | tig0023654:80781-80800 | Msa1410440:intron | 45.0% | |
| TGTTTGGGAGGCAGATGTTT+GGG | + | tig0023654:80847-80866 | None:intergenic | 45.0% | |
| TTGTTTGGGAGGCAGATGTT+TGG | + | tig0023654:80848-80867 | None:intergenic | 45.0% | |
| GTAAACCGCTTTAACCTCCT+TGG | - | tig0023654:81007-81026 | Msa1410440:intron | 45.0% | |
| CTGCCAGGTAAGATTCAAGT+AGG | - | tig0023654:81066-81085 | Msa1410440:CDS | 45.0% | |
| TAAGCTCATCACGCTTCACA+AGG | + | tig0023654:81164-81183 | None:intergenic | 45.0% | |
| CGTGATGAGCTTACCTTAGA+GGG | - | tig0023654:81171-81190 | Msa1410440:intron | 45.0% | |
| ! | ACACCAGGAGGAAAGTTGAT+TGG | - | tig0023654:81298-81317 | Msa1410440:intron | 45.0% |
| CAACCAATCAACTTTCCTCC+TGG | + | tig0023654:81304-81323 | None:intergenic | 45.0% | |
| TAGCTGAGACTGTATGGTCT+CGG | + | tig0023654:81344-81363 | None:intergenic | 45.0% | |
| CATACAGTCTCAGCTACTCA+CGG | - | tig0023654:81348-81367 | Msa1410440:intron | 45.0% | |
| AAACACGAGAAGACCCAGAA+CGG | + | tig0023654:81416-81435 | None:intergenic | 45.0% | |
| AATACCACGAGCCAACAGAT+CGG | + | tig0023654:81448-81467 | None:intergenic | 45.0% | |
| TGATGTCCAACAAGTGTCTC+TGG | - | tig0023654:81467-81486 | Msa1410440:intron | 45.0% | |
| ATGGAGATAGTTCTCAGGCT+GGG | + | tig0023654:81514-81533 | None:intergenic | 45.0% | |
| TTCCACTACGACCAATACGA+TGG | + | tig0023654:81533-81552 | None:intergenic | 45.0% | |
| ! | ATCGTATTGGTCGTAGTGGA+AGG | - | tig0023654:81532-81551 | Msa1410440:intron | 45.0% |
| ! | ATTGGTCGTAGTGGAAGGTT+TGG | - | tig0023654:81537-81556 | Msa1410440:intron | 45.0% |
| ! | ACTTTACACCCTCCCCTTTT+TGG | - | tig0023654:81744-81763 | Msa1410440:intron | 45.0% |
| AGTTGTCTGAATATCGGGGT+AGG | - | tig0023654:81829-81848 | Msa1410440:five_prime_UTR | 45.0% | |
| !! | ACCAACTAGCGTTGACTGAG+AGG | - | tig0023654:77622-77641 | Msa1410440:three_prime_UTR | 50.0% |
| !! | CCAACTAGCGTTGACTGAGA+GGG | - | tig0023654:77623-77642 | Msa1410440:three_prime_UTR | 50.0% |
| !! | CAACTAGCGTTGACTGAGAG+GGG | - | tig0023654:77624-77643 | Msa1410440:three_prime_UTR | 50.0% |
| ! | GTTTTCATCCCTCAACTCCG+CGG | - | tig0023654:77752-77771 | Msa1410440:three_prime_UTR | 50.0% |
| ! | CGTAGATCCGGGGAGTTTTT+GGG | - | tig0023654:77775-77794 | Msa1410440:three_prime_UTR | 50.0% |
| AGGGTTTCCCAAAAACTCCC+CGG | + | tig0023654:77785-77804 | None:intergenic | 50.0% | |
| ! | AGCATCGAATTGTGACCCCT+CGG | + | tig0023654:78551-78570 | None:intergenic | 50.0% |
| AGGGGTCACAATTCGATGCT+GGG | - | tig0023654:78551-78570 | Msa1410440:CDS | 50.0% | |
| TCTCTCAGGATTGCAGCTGA+TGG | - | tig0023654:78706-78725 | Msa1410440:intron | 50.0% | |
| !! | GCAGAGAATTGGGGTATTGC+AGG | + | tig0023654:79031-79050 | None:intergenic | 50.0% |
| CTCTGCACTTAGGGTCTGTT+TGG | - | tig0023654:79045-79064 | Msa1410440:intron | 50.0% | |
| TTAACGGCGGATACGCTAGT+TGG | + | tig0023654:79344-79363 | None:intergenic | 50.0% | |
| CCCCTTTGCTGAATAGCAGA+TGG | + | tig0023654:79866-79885 | None:intergenic | 50.0% | |
| GGGATAGTTCCCTTCTGCAA+GGG | - | tig0023654:79884-79903 | Msa1410440:intron | 50.0% | |
| CTACAATGTGACTCAGTGCC+AGG | - | tig0023654:79985-80004 | Msa1410440:intron | 50.0% | |
| TTGGAGCTAAAACCAAGGCC+TGG | + | tig0023654:80006-80025 | None:intergenic | 50.0% | |
| GCTTGCTCAGCAGATTGAGA+AGG | - | tig0023654:80033-80052 | Msa1410440:intron | 50.0% | |
| ! | CATGTTGTGGTTGGTACTCC+TGG | - | tig0023654:80154-80173 | Msa1410440:intron | 50.0% |
| ! | TTTTGACGGGAAGAGCGAAG+AGG | - | tig0023654:80537-80556 | Msa1410440:intron | 50.0% |
| TTTGACGGGAAGAGCGAAGA+GGG | - | tig0023654:80538-80557 | Msa1410440:intron | 50.0% | |
| !!! | TGGGAGTGTGTTTTTGGAGG+AGG | - | tig0023654:80592-80611 | Msa1410440:intron | 50.0% |
| !!! | GGGAGTGTGTTTTTGGAGGA+GGG | - | tig0023654:80593-80612 | Msa1410440:intron | 50.0% |
| !!! | GGAGTGTGTTTTTGGAGGAG+GGG | - | tig0023654:80594-80613 | Msa1410440:intron | 50.0% |
| !!! | GAGTGTGTTTTTGGAGGAGG+GGG | - | tig0023654:80595-80614 | Msa1410440:intron | 50.0% |
| !!! | AGTGTGTTTTTGGAGGAGGG+GGG | - | tig0023654:80596-80615 | Msa1410440:intron | 50.0% |
| ACCGAAACTCCCCACAAGTT+GGG | + | tig0023654:80747-80766 | None:intergenic | 50.0% | |
| TTAACCTCCATGCAAGGTGG+GGG | - | tig0023654:80782-80801 | Msa1410440:intron | 50.0% | |
| GGGGGAAAAGAGGAAGAGAA+GGG | + | tig0023654:80827-80846 | None:intergenic | 50.0% | |
| TGGGGGAAAAGAGGAAGAGA+AGG | + | tig0023654:80828-80847 | None:intergenic | 50.0% | |
| GCAGATGTTTGGGGGAAAAG+AGG | + | tig0023654:80837-80856 | None:intergenic | 50.0% | |
| TTTGGGAGGCAGATGTTTGG+GGG | + | tig0023654:80845-80864 | None:intergenic | 50.0% | |
| GTTTGGGAGGCAGATGTTTG+GGG | + | tig0023654:80846-80865 | None:intergenic | 50.0% | |
| GATATCTTTCAGCTGCTGCC+AGG | - | tig0023654:81051-81070 | Msa1410440:CDS | 50.0% | |
| CTTGTGATCTCAAGTGCCTC+AGG | + | tig0023654:81114-81133 | None:intergenic | 50.0% | |
| ! | CTGAGGCACTTGAGATCACA+AGG | - | tig0023654:81112-81131 | Msa1410440:intron | 50.0% |
| GCGTGATGAGCTTACCTTAG+AGG | - | tig0023654:81170-81189 | Msa1410440:intron | 50.0% | |
| TGAGAAAGAGGAGTGGAAGC+TGG | - | tig0023654:81218-81237 | Msa1410440:intron | 50.0% | |
| CGTGAGTAGCTGAGACTGTA+TGG | + | tig0023654:81350-81369 | None:intergenic | 50.0% | |
| GATAGTTCTCAGGCTGGGTA+GGG | + | tig0023654:81509-81528 | None:intergenic | 50.0% | |
| AGATAGTTCTCAGGCTGGGT+AGG | + | tig0023654:81510-81529 | None:intergenic | 50.0% | |
| GATGGAGATAGTTCTCAGGC+TGG | + | tig0023654:81515-81534 | None:intergenic | 50.0% | |
| ! | CTCCATCGTATTGGTCGTAG+TGG | - | tig0023654:81528-81547 | Msa1410440:intron | 50.0% |
| CCCTCTCAGTCAACGCTAGT+TGG | + | tig0023654:77626-77645 | None:intergenic | 55.0% | |
| ! | GCGTAGATCCGGGGAGTTTT+TGG | - | tig0023654:77774-77793 | Msa1410440:three_prime_UTR | 55.0% |
| GCATCGAATTGTGACCCCTC+GGG | + | tig0023654:78550-78569 | None:intergenic | 55.0% | |
| GAGGGGTCACAATTCGATGC+TGG | - | tig0023654:78550-78569 | Msa1410440:CDS | 55.0% | |
| GGGGATAGTTCCCTTCTGCA+AGG | - | tig0023654:79883-79902 | Msa1410440:intron | 55.0% | |
| ! | CAACAGGCTCAGTCTGGAAC+CGG | - | tig0023654:79920-79939 | Msa1410440:intron | 55.0% |
| ! | AACAGGCTCAGTCTGGAACC+GGG | - | tig0023654:79921-79940 | Msa1410440:intron | 55.0% |
| TGCTGAGCAAGCTCACGAGT+TGG | + | tig0023654:80025-80044 | None:intergenic | 55.0% | |
| GAGAAGGTTATGCGTGCGCT+TGG | - | tig0023654:80049-80068 | Msa1410440:intron | 55.0% | |
| CGTGCGCTTGGAGACTATCT+AGG | - | tig0023654:80061-80080 | Msa1410440:intron | 55.0% | |
| AAGGTGCATGCTTGTGTCGG+AGG | - | tig0023654:80088-80107 | Msa1410440:intron | 55.0% | |
| ! | AAGAGCGAAGAGGGCATGGA+GGG | - | tig0023654:80547-80566 | Msa1410440:intron | 55.0% |
| CCGAAACTCCCCACAAGTTG+GGG | + | tig0023654:80746-80765 | None:intergenic | 55.0% | |
| CCCCAACTTGTGGGGAGTTT+CGG | - | tig0023654:80743-80762 | Msa1410440:intron | 55.0% | |
| GACCGAAACTCCCCACAAGT+TGG | + | tig0023654:80748-80767 | None:intergenic | 55.0% | |
| CTCTGCTACAATGCCTCCTG+AGG | - | tig0023654:81095-81114 | Msa1410440:intron | 55.0% | |
| GTGATCTCAAGTGCCTCAGG+AGG | + | tig0023654:81111-81130 | None:intergenic | 55.0% | |
| CGCTTCACAAGGATCCTCAC+AGG | + | tig0023654:81153-81172 | None:intergenic | 55.0% | |
| CTCAGCTACTCACGGAGACA+TGG | - | tig0023654:81356-81375 | Msa1410440:intron | 55.0% | |
| !! | ACTACCGATCTGTTGGCTCG+TGG | - | tig0023654:81441-81460 | Msa1410440:intron | 55.0% |
| GATCTACGCCGCGGAGTTGA+GGG | + | tig0023654:77763-77782 | None:intergenic | 60.0% | |
| TCAACTCCGCGGCGTAGATC+CGG | - | tig0023654:77763-77782 | Msa1410440:three_prime_UTR | 60.0% | |
| TATGGCTGGACTTGCACCCG+AGG | - | tig0023654:78531-78550 | Msa1410440:CDS | 60.0% | |
| ATGGCTGGACTTGCACCCGA+GGG | - | tig0023654:78532-78551 | Msa1410440:CDS | 60.0% | |
| TGTGACTCAGTGCCAGGCCT+TGG | - | tig0023654:79991-80010 | Msa1410440:intron | 60.0% | |
| ! | GAAGAGCGAAGAGGGCATGG+AGG | - | tig0023654:80546-80565 | Msa1410440:intron | 60.0% |
| ! | AGAGCGAAGAGGGCATGGAG+GGG | - | tig0023654:80548-80567 | Msa1410440:intron | 60.0% |
| ! | GGGGGGGGCTCACCTATTTT+TGG | - | tig0023654:80567-80586 | Msa1410440:intron | 60.0% |
| AGTTCTCAGGCTGGGTAGGG+AGG | + | tig0023654:81506-81525 | None:intergenic | 60.0% | |
| GGATCTACGCCGCGGAGTTG+AGG | + | tig0023654:77764-77783 | None:intergenic | 65.0% | |
| CAACTCCGCGGCGTAGATCC+GGG | - | tig0023654:77764-77783 | Msa1410440:three_prime_UTR | 65.0% | |
| AACTCCGCGGCGTAGATCCG+GGG | - | tig0023654:77765-77784 | Msa1410440:three_prime_UTR | 65.0% | |
| AACTCCCCGGATCTACGCCG+CGG | + | tig0023654:77772-77791 | None:intergenic | 65.0% | |
| TGGCTGGACTTGCACCCGAG+GGG | - | tig0023654:78533-78552 | Msa1410440:CDS | 65.0% | |
| CGGGAAGAGCGAAGAGGGCA+TGG | - | tig0023654:80543-80562 | Msa1410440:intron | 65.0% | |
| ! | GAGCGAAGAGGGCATGGAGG+GGG | - | tig0023654:80549-80568 | Msa1410440:intron | 65.0% |
| ! | AGCGAAGAGGGCATGGAGGG+GGG | - | tig0023654:80550-80569 | Msa1410440:intron | 65.0% |
| ACCTCCATGCAAGGTGGGGG+TGG | - | tig0023654:80785-80804 | Msa1410440:intron | 65.0% | |
| CCTCCATGCAAGGTGGGGGT+GGG | - | tig0023654:80786-80805 | Msa1410440:intron | 65.0% | |
| ACTCCCACCCCCACCTTGCA+TGG | + | tig0023654:80792-80811 | None:intergenic | 65.0% | |
| ! | GCGAAGAGGGCATGGAGGGG+GGG | - | tig0023654:80551-80570 | Msa1410440:intron | 70.0% |
| ! | CGAAGAGGGCATGGAGGGGG+GGG | - | tig0023654:80552-80571 | Msa1410440:intron | 70.0% |
| CCCACCCCCACCTTGCATGG+AGG | + | tig0023654:80789-80808 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023654 | gene | 77529 | 82095 | 77529 | ID=Msa1410440;Name=Msa1410440 |
| tig0023654 | mRNA | 77529 | 82095 | 77529 | ID=Msa1410440-mRNA-1;Parent=Msa1410440;Name=Msa1410440-mRNA-1;_AED=0.12;_eAED=0.12;_QI=326|1|1|1|0.75|0.6|5|415|413 |
| tig0023654 | exon | 77529 | 78579 | 77529 | ID=Msa1410440-mRNA-1:exon:26552;Parent=Msa1410440-mRNA-1 |
| tig0023654 | exon | 79342 | 79772 | 79342 | ID=Msa1410440-mRNA-1:exon:26551;Parent=Msa1410440-mRNA-1 |
| tig0023654 | exon | 80804 | 80910 | 80804 | ID=Msa1410440-mRNA-1:exon:26550;Parent=Msa1410440-mRNA-1 |
| tig0023654 | exon | 81025 | 81094 | 81025 | ID=Msa1410440-mRNA-1:exon:26549;Parent=Msa1410440-mRNA-1 |
| tig0023654 | exon | 81772 | 82095 | 81772 | ID=Msa1410440-mRNA-1:exon:26548;Parent=Msa1410440-mRNA-1 |
| tig0023654 | five_prime_UTR | 81772 | 82095 | 81772 | ID=Msa1410440-mRNA-1:five_prime_utr;Parent=Msa1410440-mRNA-1 |
| tig0023654 | five_prime_UTR | 81093 | 81094 | 81093 | ID=Msa1410440-mRNA-1:five_prime_utr;Parent=Msa1410440-mRNA-1 |
| tig0023654 | CDS | 81025 | 81092 | 81025 | ID=Msa1410440-mRNA-1:cds;Parent=Msa1410440-mRNA-1 |
| tig0023654 | CDS | 80804 | 80910 | 80804 | ID=Msa1410440-mRNA-1:cds;Parent=Msa1410440-mRNA-1 |
| tig0023654 | CDS | 79342 | 79772 | 79342 | ID=Msa1410440-mRNA-1:cds;Parent=Msa1410440-mRNA-1 |
| tig0023654 | CDS | 77944 | 78579 | 77944 | ID=Msa1410440-mRNA-1:cds;Parent=Msa1410440-mRNA-1 |
| tig0023654 | three_prime_UTR | 77529 | 77943 | 77529 | ID=Msa1410440-mRNA-1:three_prime_utr;Parent=Msa1410440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
