Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266060 | KEH32495.1 | 99.516 | 413 | 2 | 0 | 1 | 413 | 1 | 413 | 0.0 | 850 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266060 | sp|Q40468|IF415_TOBAC | 92.494 | 413 | 31 | 0 | 1 | 413 | 1 | 413 | 0.0 | 792 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa1266060 | 0.804647 | 1.953973e-49 | -8.615850e-47 |
| Msa0002790 | Msa1266060 | 0.807759 | 4.320486e-50 | -8.615850e-47 |
| Msa0003780 | Msa1266060 | 0.809157 | 2.173786e-50 | -8.615850e-47 |
| Msa0022970 | Msa1266060 | 0.802341 | 5.874718e-49 | -8.615850e-47 |
| Msa0032780 | Msa1266060 | 0.825841 | 3.761760e-54 | -8.615850e-47 |
| Msa0045730 | Msa1266060 | 0.869950 | 2.108564e-66 | -8.615850e-47 |
| Msa0046830 | Msa1266060 | 0.812890 | 3.376101e-51 | -8.615850e-47 |
| Msa0048180 | Msa1266060 | 0.814612 | 1.410132e-51 | -8.615850e-47 |
| Msa0074030 | Msa1266060 | 0.806039 | 9.984057e-50 | -8.615850e-47 |
| Msa0097580 | Msa1266060 | 0.819691 | 1.016775e-52 | -8.615850e-47 |
| Msa0116130 | Msa1266060 | 0.882217 | 1.253731e-70 | -8.615850e-47 |
| Msa0116670 | Msa1266060 | 0.833477 | 5.214485e-56 | -8.615850e-47 |
| Msa0118710 | Msa1266060 | 0.812259 | 4.638675e-51 | -8.615850e-47 |
| Msa0607610 | Msa1266060 | 0.828148 | 1.055868e-54 | -8.615850e-47 |
| Msa0615580 | Msa1266060 | 0.804858 | 1.764960e-49 | -8.615850e-47 |
| Msa0622750 | Msa1266060 | 0.870941 | 9.971937e-67 | -8.615850e-47 |
| Msa0623200 | Msa1266060 | 0.872054 | 4.268403e-67 | -8.615850e-47 |
| Msa0631250 | Msa1266060 | 0.840068 | 1.086315e-57 | -8.615850e-47 |
| Msa0659030 | Msa1266060 | 0.840233 | 9.837691e-58 | -8.615850e-47 |
| Msa0666230 | Msa1266060 | 0.820645 | 6.149670e-53 | -8.615850e-47 |
| Msa0687870 | Msa1266060 | 0.862334 | 5.455620e-64 | -8.615850e-47 |
| Msa0705000 | Msa1266060 | 0.846829 | 1.698852e-59 | -8.615850e-47 |
| Msa0705040 | Msa1266060 | 0.838981 | 2.081736e-57 | -8.615850e-47 |
| Msa0706500 | Msa1266060 | 0.842888 | 1.964000e-58 | -8.615850e-47 |
| Msa0709780 | Msa1266060 | 0.845783 | 3.273573e-59 | -8.615850e-47 |
| Msa0717380 | Msa1266060 | 0.812182 | 4.821233e-51 | -8.615850e-47 |
| Msa0781080 | Msa1266060 | 0.820008 | 8.603468e-53 | -8.615850e-47 |
| Msa0785130 | Msa1266060 | 0.857423 | 1.648777e-62 | -8.615850e-47 |
| Msa0790400 | Msa1266060 | 0.854139 | 1.502188e-61 | -8.615850e-47 |
| Msa0792420 | Msa1266060 | 0.830784 | 2.415783e-55 | -8.615850e-47 |
| Msa0808800 | Msa1266060 | 0.818681 | 1.726535e-52 | -8.615850e-47 |
| Msa0817540 | Msa1266060 | 0.836835 | 7.413863e-57 | -8.615850e-47 |
| Msa0133540 | Msa1266060 | 0.808953 | 2.403854e-50 | -8.615850e-47 |
| Msa0138920 | Msa1266060 | 0.839155 | 1.876714e-57 | -8.615850e-47 |
| Msa0146340 | Msa1266060 | 0.840960 | 6.347991e-58 | -8.615850e-47 |
| Msa0172900 | Msa1266060 | 0.813838 | 2.089527e-51 | -8.615850e-47 |
| Msa0173530 | Msa1266060 | 0.831996 | 1.215965e-55 | -8.615850e-47 |
| Msa0178120 | Msa1266060 | 0.811131 | 8.163243e-51 | -8.615850e-47 |
| Msa0181610 | Msa1266060 | 0.803143 | 4.012723e-49 | -8.615850e-47 |
| Msa0188690 | Msa1266060 | 0.848164 | 7.298564e-60 | -8.615850e-47 |
| Msa0189700 | Msa1266060 | 0.825519 | 4.485885e-54 | -8.615850e-47 |
| Msa0192230 | Msa1266060 | 0.811972 | 5.358140e-51 | -8.615850e-47 |
| Msa0218830 | Msa1266060 | 0.833040 | 6.700174e-56 | -8.615850e-47 |
| Msa0219120 | Msa1266060 | 0.829306 | 5.542510e-55 | -8.615850e-47 |
| Msa0221030 | Msa1266060 | 0.838895 | 2.190754e-57 | -8.615850e-47 |
| Msa0223170 | Msa1266060 | 0.805578 | 1.247833e-49 | -8.615850e-47 |
| Msa0230490 | Msa1266060 | 0.869416 | 3.148386e-66 | -8.615850e-47 |
| Msa0232010 | Msa1266060 | 0.818270 | 2.139131e-52 | -8.615850e-47 |
| Msa0232080 | Msa1266060 | 0.823108 | 1.654039e-53 | -8.615850e-47 |
| Msa0238090 | Msa1266060 | 0.803393 | 3.562230e-49 | -8.615850e-47 |
| Msa1227690 | Msa1266060 | 0.802818 | 4.683294e-49 | -8.615850e-47 |
| Msa1230580 | Msa1266060 | 0.817279 | 3.581534e-52 | -8.615850e-47 |
| Msa1241190 | Msa1266060 | 0.822308 | 2.538970e-53 | -8.615850e-47 |
| Msa1258710 | Msa1266060 | 0.840168 | 1.022625e-57 | -8.615850e-47 |
| Msa1262890 | Msa1266060 | 0.802562 | 5.288214e-49 | -8.615850e-47 |
| Msa1266060 | Msa1273340 | 0.812746 | 3.629590e-51 | -8.615850e-47 |
| Msa1266060 | Msa1299590 | 0.822686 | 2.074185e-53 | -8.615850e-47 |
| Msa1266060 | Msa1321790 | 0.819005 | 1.457620e-52 | -8.615850e-47 |
| Msa1266060 | Msa1332250 | 0.858787 | 6.480428e-63 | -8.615850e-47 |
| Msa1266060 | Msa1333560 | 0.840651 | 7.649559e-58 | -8.615850e-47 |
| Msa1266060 | Msa1338190 | 0.842676 | 2.235550e-58 | -8.615850e-47 |
| Msa1266060 | Msa1343260 | 0.861851 | 7.669625e-64 | -8.615850e-47 |
| Msa1266060 | Msa1349570 | 0.821467 | 3.975901e-53 | -8.615850e-47 |
| Msa1266060 | Msa1360960 | 0.815883 | 7.359637e-52 | -8.615850e-47 |
| Msa1266060 | Msa1362790 | 0.875975 | 2.016138e-68 | -8.615850e-47 |
| Msa1266060 | Msa1363330 | 0.834596 | 2.736197e-56 | -8.615850e-47 |
| Msa1266060 | Msa1369150 | 0.807274 | 5.475595e-50 | -8.615850e-47 |
| Msa1266060 | Msa1369190 | 0.837369 | 5.414249e-57 | -8.615850e-47 |
| Msa1266060 | Msa1374240 | 0.805758 | 1.143792e-49 | -8.615850e-47 |
| Msa1266060 | Msa1380380 | 0.820853 | 5.506403e-53 | -8.615850e-47 |
| Msa1266060 | Msa1386600 | 0.833335 | 5.658496e-56 | -8.615850e-47 |
| Msa1266060 | Msa1399530 | 0.810224 | 1.282099e-50 | -8.615850e-47 |
| Msa1266060 | Msa1401390 | 0.860468 | 2.023240e-63 | -8.615850e-47 |
| Msa1266060 | Msa1403570 | 0.823291 | 1.499396e-53 | -8.615850e-47 |
| Msa1266060 | Msa1410440 | 0.998339 | 2.859161e-262 | -8.615850e-47 |
| Msa1266060 | Msa1411500 | 0.850224 | 1.949624e-60 | -8.615850e-47 |
| Msa1266060 | Msa1418770 | 0.819244 | 1.285844e-52 | -8.615850e-47 |
| Msa1266060 | Msa1426120 | 0.801170 | 1.021865e-48 | -8.615850e-47 |
| Msa1266060 | Msa1426490 | 0.834355 | 3.144580e-56 | -8.615850e-47 |
| Msa1266060 | Msa1427160 | 0.805265 | 1.450887e-49 | -8.615850e-47 |
| Msa1266060 | Msa1427560 | 0.853025 | 3.137928e-61 | -8.615850e-47 |
| Msa1266060 | Msa1428810 | 0.805003 | 1.646109e-49 | -8.615850e-47 |
| Msa1266060 | Msa1443300 | 0.846884 | 1.640570e-59 | -8.615850e-47 |
| Msa1266060 | Msa1449930 | 0.802573 | 5.261382e-49 | -8.615850e-47 |
| Msa1266060 | Msa1462860 | 0.826106 | 3.255028e-54 | -8.615850e-47 |
| Msa0423750 | Msa1266060 | 0.831793 | 1.364529e-55 | -8.615850e-47 |
| Msa0427780 | Msa1266060 | 0.803280 | 3.758157e-49 | -8.615850e-47 |
| Msa0434920 | Msa1266060 | 0.830174 | 3.407770e-55 | -8.615850e-47 |
| Msa0435370 | Msa1266060 | 0.827496 | 1.515156e-54 | -8.615850e-47 |
| Msa0435420 | Msa1266060 | 0.838283 | 3.152473e-57 | -8.615850e-47 |
| Msa0435570 | Msa1266060 | 0.815578 | 8.605722e-52 | -8.615850e-47 |
| Msa0443390 | Msa1266060 | 0.854635 | 1.079636e-61 | -8.615850e-47 |
| Msa1019240 | Msa1266060 | 0.846397 | 2.229128e-59 | -8.615850e-47 |
| Msa1019260 | Msa1266060 | 0.852960 | 3.276268e-61 | -8.615850e-47 |
| Msa1039520 | Msa1266060 | 0.820270 | 7.493456e-53 | -8.615850e-47 |
| Msa1043690 | Msa1266060 | 0.813386 | 2.627468e-51 | -8.615850e-47 |
| Msa1104140 | Msa1266060 | 0.816336 | 5.828658e-52 | -8.615850e-47 |
| Msa1104210 | Msa1266060 | 0.839316 | 1.704454e-57 | -8.615850e-47 |
| Msa0245580 | Msa1266060 | 0.805346 | 1.395557e-49 | -8.615850e-47 |
| Msa0258850 | Msa1266060 | 0.833511 | 5.113599e-56 | -8.615850e-47 |
| Msa0262480 | Msa1266060 | 0.829257 | 5.696756e-55 | -8.615850e-47 |
| Msa0264010 | Msa1266060 | 0.802976 | 4.345369e-49 | -8.615850e-47 |
| Msa0270210 | Msa1266060 | 0.832250 | 1.052000e-55 | -8.615850e-47 |
| Msa0289580 | Msa1266060 | 0.814395 | 1.574647e-51 | -8.615850e-47 |
| Msa0289610 | Msa1266060 | 0.821401 | 4.116753e-53 | -8.615850e-47 |
| Msa0298200 | Msa1266060 | 0.834590 | 2.744186e-56 | -8.615850e-47 |
| Msa0300350 | Msa1266060 | 0.821322 | 4.294022e-53 | -8.615850e-47 |
| Msa0307850 | Msa1266060 | 0.845262 | 4.532333e-59 | -8.615850e-47 |
| Msa0327300 | Msa1266060 | 0.829956 | 3.851426e-55 | -8.615850e-47 |
| Msa0327330 | Msa1266060 | 0.816228 | 6.162977e-52 | -8.615850e-47 |
| Msa0333190 | Msa1266060 | 0.807686 | 4.477679e-50 | -8.615850e-47 |
| Msa0336010 | Msa1266060 | 0.819177 | 1.331640e-52 | -8.615850e-47 |
| Msa0337670 | Msa1266060 | 0.823366 | 1.439667e-53 | -8.615850e-47 |
| Msa0348830 | Msa1266060 | 0.878543 | 2.579473e-69 | -8.615850e-47 |
| Msa1119070 | Msa1266060 | 0.830677 | 2.566279e-55 | -8.615850e-47 |
| Msa1119170 | Msa1266060 | 0.834041 | 3.769141e-56 | -8.615850e-47 |
| Msa1123830 | Msa1266060 | 0.809765 | 1.609308e-50 | -8.615850e-47 |
| Msa1126510 | Msa1266060 | 0.815450 | 9.188205e-52 | -8.615850e-47 |
| Msa1127590 | Msa1266060 | 0.817270 | 3.596800e-52 | -8.615850e-47 |
| Msa1143650 | Msa1266060 | 0.827740 | 1.323709e-54 | -8.615850e-47 |
| Msa1166860 | Msa1266060 | 0.822419 | 2.393599e-53 | -8.615850e-47 |
| Msa1166870 | Msa1266060 | 0.830035 | 3.684061e-55 | -8.615850e-47 |
| Msa1167540 | Msa1266060 | 0.804744 | 1.864981e-49 | -8.615850e-47 |
| Msa1171960 | Msa1266060 | 0.810537 | 1.097041e-50 | -8.615850e-47 |
| Msa1208020 | Msa1266060 | 0.831862 | 1.312137e-55 | -8.615850e-47 |
| Msa1215820 | Msa1266060 | 0.801133 | 1.039472e-48 | -8.615850e-47 |
| Msa1218140 | Msa1266060 | 0.824080 | 9.795196e-54 | -8.615850e-47 |
| Msa0483110 | Msa1266060 | 0.820511 | 6.599450e-53 | -8.615850e-47 |
| Msa0526540 | Msa1266060 | 0.837638 | 4.617993e-57 | -8.615850e-47 |
| Msa0527020 | Msa1266060 | 0.813318 | 2.719437e-51 | -8.615850e-47 |
| Msa0527150 | Msa1266060 | 0.834078 | 3.689997e-56 | -8.615850e-47 |
| Msa0534750 | Msa1266060 | 0.841204 | 5.475867e-58 | -8.615850e-47 |
| Msa0576940 | Msa1266060 | 0.839574 | 1.460573e-57 | -8.615850e-47 |
| Msa0584030 | Msa1266060 | 0.800151 | 1.648994e-48 | -8.615850e-47 |
| Msa0590940 | Msa1266060 | 0.817277 | 3.585085e-52 | -8.615850e-47 |
| Msa0867060 | Msa1266060 | 0.999069 | 1.133842e-288 | -8.615850e-47 |
| Msa0872670 | Msa1266060 | 0.812080 | 5.073946e-51 | -8.615850e-47 |
| Msa0881290 | Msa1266060 | 0.825645 | 4.187943e-54 | -8.615850e-47 |
| Msa0888810 | Msa1266060 | 0.802175 | 6.356345e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266060 | MtrunA17_Chr4g0070981 | 99.516 | 413 | 2 | 0 | 1 | 413 | 1 | 413 | 0.0 | 850 |
| Msa1266060 | MtrunA17_Chr2g0299681 | 93.705 | 413 | 26 | 0 | 1 | 413 | 1 | 413 | 0.0 | 803 |
| Msa1266060 | MtrunA17_Chr8g0342861 | 91.525 | 413 | 35 | 0 | 1 | 413 | 1 | 413 | 0.0 | 785 |
| Msa1266060 | MtrunA17_Chr2g0329931 | 91.525 | 413 | 35 | 0 | 1 | 413 | 1 | 413 | 0.0 | 782 |
| Msa1266060 | MtrunA17_Chr2g0297261 | 64.879 | 373 | 131 | 0 | 41 | 413 | 34 | 406 | 0.0 | 512 |
| Msa1266060 | MtrunA17_Chr1g0169331 | 60.152 | 394 | 120 | 5 | 56 | 413 | 6 | 398 | 5.30e-161 | 458 |
| Msa1266060 | MtrunA17_Chr8g0342851 | 61.272 | 346 | 102 | 4 | 71 | 413 | 3 | 319 | 8.21e-140 | 402 |
| Msa1266060 | MtrunA17_Chr7g0247191 | 39.948 | 388 | 220 | 3 | 19 | 406 | 139 | 513 | 9.25e-91 | 283 |
| Msa1266060 | MtrunA17_Chr7g0247181 | 39.433 | 388 | 222 | 3 | 19 | 406 | 129 | 503 | 1.34e-89 | 280 |
| Msa1266060 | MtrunA17_Chr7g0247221 | 39.433 | 388 | 222 | 3 | 19 | 406 | 132 | 506 | 2.22e-89 | 280 |
| Msa1266060 | MtrunA17_Chr4g0003441 | 39.402 | 368 | 217 | 6 | 47 | 409 | 114 | 480 | 1.55e-75 | 243 |
| Msa1266060 | MtrunA17_Chr1g0149251 | 38.872 | 337 | 200 | 6 | 78 | 409 | 1 | 336 | 1.83e-70 | 225 |
| Msa1266060 | MtrunA17_Chr3g0107851 | 35.467 | 375 | 220 | 5 | 40 | 396 | 116 | 486 | 9.07e-68 | 224 |
| Msa1266060 | MtrunA17_Chr1g0179761 | 35.492 | 417 | 227 | 13 | 28 | 411 | 71 | 478 | 2.59e-66 | 219 |
| Msa1266060 | MtrunA17_Chr7g0271121 | 38.304 | 342 | 196 | 8 | 66 | 396 | 131 | 468 | 2.14e-62 | 214 |
| Msa1266060 | MtrunA17_Chr3g0095031 | 33.413 | 419 | 258 | 8 | 2 | 411 | 59 | 465 | 1.31e-61 | 208 |
| Msa1266060 | MtrunA17_Chr2g0330401 | 33.611 | 360 | 233 | 2 | 41 | 394 | 96 | 455 | 2.77e-61 | 206 |
| Msa1266060 | MtrunA17_Chr3g0121351 | 34.103 | 390 | 234 | 7 | 40 | 407 | 144 | 532 | 8.82e-61 | 207 |
| Msa1266060 | MtrunA17_Chr4g0076491 | 33.770 | 382 | 215 | 6 | 47 | 397 | 293 | 667 | 1.53e-60 | 208 |
| Msa1266060 | MtrunA17_Chr5g0442191 | 34.501 | 371 | 230 | 7 | 45 | 406 | 85 | 451 | 3.14e-60 | 205 |
| Msa1266060 | MtrunA17_Chr6g0483491 | 32.884 | 371 | 245 | 3 | 41 | 408 | 10 | 379 | 1.33e-59 | 200 |
| Msa1266060 | MtrunA17_Chr7g0236841 | 32.884 | 371 | 245 | 3 | 41 | 408 | 10 | 379 | 3.19e-59 | 199 |
| Msa1266060 | MtrunA17_Chr7g0270131 | 34.648 | 355 | 223 | 6 | 41 | 387 | 232 | 585 | 5.16e-59 | 205 |
| Msa1266060 | MtrunA17_Chr6g0449741 | 33.947 | 380 | 215 | 6 | 47 | 397 | 255 | 627 | 6.81e-59 | 203 |
| Msa1266060 | MtrunA17_Chr1g0193491 | 35.196 | 358 | 204 | 8 | 45 | 384 | 118 | 465 | 3.05e-58 | 201 |
| Msa1266060 | MtrunA17_Chr4g0063551 | 33.673 | 392 | 231 | 6 | 42 | 407 | 141 | 529 | 6.44e-58 | 201 |
| Msa1266060 | MtrunA17_Chr4g0040761 | 32.162 | 370 | 247 | 3 | 42 | 407 | 20 | 389 | 6.27e-57 | 199 |
| Msa1266060 | MtrunA17_Chr2g0310581 | 32.292 | 384 | 253 | 4 | 17 | 395 | 31 | 412 | 1.02e-56 | 194 |
| Msa1266060 | MtrunA17_Chr1g0176041 | 31.701 | 388 | 245 | 5 | 40 | 407 | 153 | 540 | 1.84e-55 | 193 |
| Msa1266060 | MtrunA17_Chr1g0157691 | 30.848 | 389 | 250 | 8 | 41 | 413 | 147 | 532 | 2.67e-55 | 192 |
| Msa1266060 | MtrunA17_Chr3g0098121 | 34.153 | 366 | 229 | 5 | 40 | 396 | 151 | 513 | 1.51e-54 | 192 |
| Msa1266060 | MtrunA17_Chr1g0200181 | 30.848 | 389 | 250 | 8 | 41 | 413 | 145 | 530 | 1.70e-54 | 190 |
| Msa1266060 | MtrunA17_Chr2g0277821 | 33.594 | 384 | 239 | 5 | 41 | 412 | 504 | 883 | 2.60e-54 | 194 |
| Msa1266060 | MtrunA17_Chr6g0449911 | 33.681 | 383 | 237 | 9 | 41 | 412 | 165 | 541 | 3.44e-54 | 191 |
| Msa1266060 | MtrunA17_Chr5g0409981 | 33.505 | 388 | 237 | 7 | 28 | 403 | 95 | 473 | 5.65e-53 | 184 |
| Msa1266060 | MtrunA17_Chr2g0293631 | 32.162 | 370 | 240 | 5 | 24 | 387 | 483 | 847 | 2.13e-52 | 188 |
| Msa1266060 | MtrunA17_Chr6g0461751 | 32.418 | 364 | 234 | 6 | 41 | 394 | 140 | 501 | 2.65e-49 | 175 |
| Msa1266060 | MtrunA17_Chr2g0300291 | 33.243 | 367 | 232 | 6 | 40 | 396 | 140 | 503 | 5.01e-49 | 177 |
| Msa1266060 | MtrunA17_Chr2g0307471 | 31.335 | 367 | 233 | 9 | 40 | 392 | 90 | 451 | 1.95e-45 | 165 |
| Msa1266060 | MtrunA17_Chr4g0062301 | 30.919 | 359 | 226 | 10 | 50 | 392 | 106 | 458 | 3.44e-43 | 159 |
| Msa1266060 | MtrunA17_Chr7g0263771 | 28.900 | 391 | 251 | 7 | 34 | 412 | 129 | 504 | 2.79e-42 | 157 |
| Msa1266060 | MtrunA17_Chr3g0114081 | 29.730 | 370 | 232 | 7 | 47 | 389 | 22 | 390 | 5.90e-42 | 155 |
| Msa1266060 | MtrunA17_Chr6g0475251 | 30.199 | 351 | 218 | 6 | 45 | 380 | 115 | 453 | 1.89e-40 | 152 |
| Msa1266060 | MtrunA17_Chr2g0309551 | 25.837 | 418 | 245 | 7 | 41 | 396 | 109 | 523 | 3.71e-40 | 150 |
| Msa1266060 | MtrunA17_Chr4g0058591 | 30.938 | 320 | 215 | 2 | 41 | 354 | 202 | 521 | 2.46e-39 | 147 |
| Msa1266060 | MtrunA17_Chr7g0236831 | 25.850 | 441 | 241 | 10 | 39 | 399 | 161 | 595 | 2.12e-37 | 144 |
| Msa1266060 | MtrunA17_Chr8g0347171 | 27.968 | 379 | 234 | 9 | 42 | 391 | 161 | 529 | 3.94e-37 | 142 |
| Msa1266060 | MtrunA17_Chr8g0347161 | 29.167 | 360 | 232 | 9 | 42 | 380 | 103 | 460 | 7.90e-37 | 141 |
| Msa1266060 | MtrunA17_Chr1g0204391 | 28.610 | 367 | 219 | 7 | 49 | 380 | 52 | 410 | 3.08e-36 | 139 |
| Msa1266060 | MtrunA17_Chr8g0386451 | 28.052 | 385 | 253 | 9 | 42 | 406 | 289 | 669 | 3.31e-36 | 140 |
| Msa1266060 | MtrunA17_Chr8g0347151 | 27.704 | 379 | 235 | 8 | 42 | 391 | 202 | 570 | 3.75e-36 | 140 |
| Msa1266060 | MtrunA17_Chr6g0466611 | 28.947 | 380 | 242 | 9 | 41 | 396 | 142 | 517 | 5.87e-35 | 137 |
| Msa1266060 | MtrunA17_Chr4g0025141 | 36.715 | 207 | 116 | 5 | 214 | 405 | 14 | 220 | 2.64e-34 | 127 |
| Msa1266060 | MtrunA17_Chr1g0192021 | 26.895 | 409 | 244 | 8 | 41 | 397 | 26 | 431 | 2.86e-34 | 134 |
| Msa1266060 | MtrunA17_Chr4g0034411 | 28.809 | 361 | 235 | 11 | 68 | 413 | 102 | 455 | 5.97e-33 | 131 |
| Msa1266060 | MtrunA17_Chr5g0443991 | 28.571 | 350 | 229 | 10 | 68 | 402 | 102 | 445 | 1.85e-32 | 129 |
| Msa1266060 | MtrunA17_Chr3g0137901 | 39.024 | 164 | 98 | 2 | 247 | 409 | 10 | 172 | 8.56e-32 | 119 |
| Msa1266060 | MtrunA17_Chr5g0429221 | 26.975 | 367 | 248 | 7 | 41 | 396 | 3 | 360 | 1.06e-29 | 119 |
| Msa1266060 | MtrunA17_Chr3g0137891 | 42.236 | 161 | 90 | 3 | 78 | 235 | 1 | 161 | 8.01e-28 | 110 |
| Msa1266060 | MtrunA17_Chr3g0145781 | 25.728 | 412 | 252 | 13 | 24 | 394 | 120 | 518 | 1.54e-25 | 108 |
| Msa1266060 | MtrunA17_Chr4g0039471 | 37.097 | 186 | 114 | 2 | 41 | 223 | 223 | 408 | 8.50e-24 | 102 |
| Msa1266060 | MtrunA17_Chr4g0004301 | 25.729 | 377 | 210 | 13 | 79 | 388 | 71 | 444 | 3.64e-23 | 101 |
| Msa1266060 | MtrunA17_Chr5g0434301 | 25.729 | 377 | 210 | 13 | 79 | 388 | 71 | 444 | 1.70e-22 | 99.4 |
| Msa1266060 | MtrunA17_Chr4g0025131 | 35.802 | 162 | 97 | 3 | 41 | 197 | 56 | 215 | 1.83e-22 | 96.7 |
| Msa1266060 | MtrunA17_Chr4g0062321 | 29.237 | 236 | 157 | 6 | 117 | 348 | 4 | 233 | 1.91e-22 | 95.5 |
| Msa1266060 | MtrunA17_Chr4g0025101 | 30.252 | 238 | 100 | 7 | 198 | 411 | 7 | 202 | 3.71e-22 | 94.0 |
| Msa1266060 | MtrunA17_Chr4g0074521 | 26.184 | 359 | 223 | 11 | 49 | 372 | 90 | 441 | 3.83e-22 | 98.2 |
| Msa1266060 | MtrunA17_Chr8g0349951 | 37.500 | 136 | 84 | 1 | 41 | 175 | 10 | 145 | 1.19e-18 | 82.4 |
| Msa1266060 | MtrunA17_Chr4g0029191 | 31.183 | 186 | 118 | 5 | 41 | 217 | 44 | 228 | 6.24e-18 | 85.9 |
| Msa1266060 | MtrunA17_Chr4g0029191 | 35.106 | 94 | 61 | 0 | 310 | 403 | 392 | 485 | 8.68e-14 | 73.2 |
| Msa1266060 | MtrunA17_Chr2g0301281 | 30.645 | 186 | 119 | 5 | 41 | 217 | 41 | 225 | 1.91e-17 | 84.3 |
| Msa1266060 | MtrunA17_Chr2g0301281 | 34.021 | 97 | 63 | 1 | 310 | 406 | 389 | 484 | 1.08e-13 | 72.8 |
| Msa1266060 | MtrunA17_Chr1g0155201 | 27.660 | 235 | 143 | 9 | 160 | 387 | 13 | 227 | 5.23e-15 | 75.9 |
| Msa1266060 | MtrunA17_Chr8g0354761 | 23.204 | 362 | 244 | 11 | 64 | 404 | 31 | 379 | 1.90e-14 | 74.7 |
| Msa1266060 | MtrunA17_Chr0c30g0494091 | 30.065 | 153 | 98 | 2 | 49 | 192 | 90 | 242 | 1.66e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266060 | AT3G13920.1 | 91.283 | 413 | 35 | 1 | 1 | 413 | 1 | 412 | 0.0 | 776 |
| Msa1266060 | AT1G54270.1 | 91.304 | 414 | 33 | 2 | 1 | 413 | 1 | 412 | 0.0 | 771 |
| Msa1266060 | AT3G13920.4 | 90.073 | 413 | 35 | 2 | 1 | 413 | 1 | 407 | 0.0 | 759 |
| Msa1266060 | AT1G72730.1 | 88.164 | 414 | 48 | 1 | 1 | 413 | 1 | 414 | 0.0 | 756 |
| Msa1266060 | AT1G54270.2 | 90.097 | 414 | 33 | 3 | 1 | 413 | 1 | 407 | 0.0 | 754 |
| Msa1266060 | AT3G13920.3 | 93.766 | 385 | 24 | 0 | 29 | 413 | 18 | 402 | 0.0 | 745 |
| Msa1266060 | AT3G13920.2 | 91.560 | 391 | 32 | 1 | 1 | 391 | 1 | 390 | 0.0 | 736 |
| Msa1266060 | AT3G13920.5 | 91.560 | 391 | 32 | 1 | 1 | 391 | 5 | 394 | 0.0 | 736 |
| Msa1266060 | AT3G19760.1 | 64.191 | 377 | 135 | 0 | 37 | 413 | 32 | 408 | 4.66e-180 | 508 |
| Msa1266060 | AT1G51380.1 | 58.808 | 369 | 152 | 0 | 41 | 409 | 23 | 391 | 7.95e-162 | 461 |
| Msa1266060 | AT1G51380.2 | 59.127 | 252 | 103 | 0 | 41 | 292 | 23 | 274 | 2.51e-107 | 318 |
| Msa1266060 | AT3G61240.2 | 40.722 | 388 | 217 | 4 | 22 | 409 | 117 | 491 | 9.80e-93 | 288 |
| Msa1266060 | AT3G61240.1 | 40.722 | 388 | 217 | 4 | 22 | 409 | 117 | 491 | 9.80e-93 | 288 |
| Msa1266060 | AT4G00660.1 | 38.875 | 391 | 226 | 3 | 19 | 409 | 121 | 498 | 1.03e-90 | 283 |
| Msa1266060 | AT4G00660.2 | 38.875 | 391 | 226 | 3 | 19 | 409 | 121 | 498 | 1.03e-90 | 283 |
| Msa1266060 | AT2G45810.1 | 40.415 | 386 | 217 | 4 | 22 | 407 | 147 | 519 | 2.75e-90 | 283 |
| Msa1266060 | AT1G51380.4 | 56.872 | 211 | 91 | 0 | 41 | 251 | 23 | 233 | 6.45e-82 | 254 |
| Msa1266060 | AT1G51380.3 | 56.872 | 211 | 91 | 0 | 41 | 251 | 23 | 233 | 8.78e-82 | 253 |
| Msa1266060 | AT5G11170.1 | 38.046 | 389 | 234 | 7 | 27 | 409 | 32 | 419 | 3.89e-76 | 243 |
| Msa1266060 | AT5G11200.1 | 38.046 | 389 | 234 | 7 | 27 | 409 | 32 | 419 | 3.89e-76 | 243 |
| Msa1266060 | AT5G11170.2 | 38.872 | 337 | 200 | 6 | 78 | 409 | 1 | 336 | 1.87e-69 | 223 |
| Msa1266060 | AT5G11200.3 | 34.419 | 430 | 234 | 8 | 27 | 409 | 32 | 460 | 9.96e-68 | 222 |
| Msa1266060 | AT3G53110.1 | 35.000 | 400 | 232 | 11 | 33 | 407 | 81 | 477 | 2.86e-67 | 222 |
| Msa1266060 | AT5G26742.1 | 35.000 | 420 | 244 | 10 | 9 | 413 | 80 | 485 | 9.00e-65 | 221 |
| Msa1266060 | AT5G26742.2 | 35.000 | 420 | 244 | 10 | 9 | 413 | 80 | 485 | 9.13e-65 | 221 |
| Msa1266060 | AT5G26742.3 | 35.844 | 385 | 215 | 10 | 44 | 413 | 25 | 392 | 2.22e-63 | 215 |
| Msa1266060 | AT2G33730.1 | 34.937 | 395 | 225 | 6 | 41 | 410 | 314 | 701 | 2.57e-63 | 216 |
| Msa1266060 | AT5G63120.2 | 34.392 | 378 | 242 | 2 | 42 | 413 | 167 | 544 | 6.53e-63 | 213 |
| Msa1266060 | AT3G22330.1 | 32.710 | 428 | 264 | 9 | 3 | 411 | 58 | 480 | 1.92e-62 | 212 |
| Msa1266060 | AT3G22310.2 | 34.309 | 376 | 234 | 6 | 45 | 411 | 121 | 492 | 2.85e-62 | 211 |
| Msa1266060 | AT3G22310.1 | 34.309 | 376 | 234 | 6 | 45 | 411 | 121 | 492 | 3.75e-62 | 211 |
| Msa1266060 | AT1G55150.1 | 34.571 | 350 | 223 | 2 | 41 | 384 | 100 | 449 | 4.17e-62 | 208 |
| Msa1266060 | AT1G55150.2 | 34.571 | 350 | 223 | 2 | 41 | 384 | 125 | 474 | 5.67e-62 | 209 |
| Msa1266060 | AT1G77030.1 | 32.432 | 370 | 246 | 3 | 42 | 407 | 30 | 399 | 5.42e-60 | 209 |
| Msa1266060 | AT3G58570.1 | 33.416 | 401 | 236 | 8 | 33 | 406 | 136 | 532 | 2.36e-58 | 202 |
| Msa1266060 | AT3G58510.1 | 33.247 | 385 | 227 | 8 | 43 | 406 | 160 | 535 | 6.95e-58 | 200 |
| Msa1266060 | AT3G58510.3 | 33.247 | 385 | 227 | 8 | 43 | 406 | 160 | 535 | 6.95e-58 | 200 |
| Msa1266060 | AT3G58510.2 | 33.247 | 385 | 227 | 8 | 43 | 406 | 160 | 535 | 6.95e-58 | 200 |
| Msa1266060 | AT2G42520.2 | 33.017 | 421 | 248 | 10 | 16 | 406 | 129 | 545 | 1.36e-57 | 199 |
| Msa1266060 | AT2G42520.1 | 33.017 | 421 | 248 | 10 | 16 | 406 | 129 | 545 | 1.36e-57 | 199 |
| Msa1266060 | AT2G42520.3 | 33.017 | 421 | 248 | 10 | 16 | 406 | 129 | 545 | 1.36e-57 | 199 |
| Msa1266060 | AT5G14610.5 | 34.204 | 383 | 235 | 10 | 41 | 412 | 170 | 546 | 5.12e-57 | 198 |
| Msa1266060 | AT5G14610.6 | 34.204 | 383 | 235 | 10 | 41 | 412 | 162 | 538 | 5.41e-57 | 198 |
| Msa1266060 | AT5G14610.2 | 34.204 | 383 | 235 | 10 | 41 | 412 | 162 | 538 | 5.67e-57 | 198 |
| Msa1266060 | AT5G60990.1 | 32.143 | 392 | 250 | 5 | 36 | 413 | 5 | 394 | 3.04e-56 | 192 |
| Msa1266060 | AT1G16280.1 | 32.964 | 361 | 237 | 2 | 41 | 396 | 59 | 419 | 1.28e-55 | 191 |
| Msa1266060 | AT4G16630.1 | 33.867 | 375 | 239 | 4 | 31 | 396 | 155 | 529 | 1.40e-55 | 196 |
| Msa1266060 | AT1G20920.2 | 33.511 | 376 | 240 | 5 | 46 | 412 | 197 | 571 | 1.50e-55 | 196 |
| Msa1266060 | AT3G01540.1 | 33.862 | 378 | 243 | 6 | 41 | 412 | 159 | 535 | 2.40e-55 | 193 |
| Msa1266060 | AT3G01540.4 | 33.862 | 378 | 243 | 6 | 41 | 412 | 159 | 535 | 2.43e-55 | 193 |
| Msa1266060 | AT3G01540.2 | 33.862 | 378 | 243 | 6 | 41 | 412 | 159 | 535 | 2.43e-55 | 193 |
| Msa1266060 | AT3G01540.3 | 33.862 | 378 | 243 | 6 | 41 | 412 | 159 | 535 | 2.43e-55 | 193 |
| Msa1266060 | AT2G47330.1 | 34.807 | 362 | 213 | 8 | 41 | 387 | 229 | 582 | 2.53e-55 | 195 |
| Msa1266060 | AT3G06480.1 | 33.681 | 383 | 241 | 6 | 39 | 412 | 434 | 812 | 6.06e-55 | 196 |
| Msa1266060 | AT1G20920.4 | 33.511 | 376 | 240 | 5 | 46 | 412 | 535 | 909 | 3.42e-54 | 194 |
| Msa1266060 | AT1G20920.6 | 33.511 | 376 | 240 | 5 | 46 | 412 | 535 | 909 | 3.42e-54 | 194 |
| Msa1266060 | AT1G20920.3 | 33.511 | 376 | 240 | 5 | 46 | 412 | 535 | 909 | 3.42e-54 | 194 |
| Msa1266060 | AT1G20920.7 | 33.511 | 376 | 240 | 5 | 46 | 412 | 535 | 909 | 3.42e-54 | 194 |
| Msa1266060 | AT1G20920.5 | 33.511 | 376 | 240 | 5 | 46 | 412 | 535 | 909 | 3.42e-54 | 194 |
| Msa1266060 | AT1G20920.1 | 33.511 | 376 | 240 | 5 | 46 | 412 | 535 | 909 | 3.42e-54 | 194 |
| Msa1266060 | AT5G14610.7 | 33.062 | 369 | 230 | 9 | 55 | 412 | 45 | 407 | 8.21e-53 | 184 |
| Msa1266060 | AT5G14610.3 | 33.062 | 369 | 230 | 9 | 55 | 412 | 45 | 407 | 8.21e-53 | 184 |
| Msa1266060 | AT5G51280.1 | 30.412 | 388 | 251 | 7 | 41 | 412 | 147 | 531 | 1.07e-52 | 185 |
| Msa1266060 | AT4G33370.1 | 31.443 | 388 | 247 | 8 | 41 | 412 | 98 | 482 | 1.17e-52 | 184 |
| Msa1266060 | AT1G28180.1 | 35.072 | 345 | 204 | 7 | 79 | 410 | 12 | 349 | 6.01e-52 | 178 |
| Msa1266060 | AT5G14610.1 | 32.984 | 382 | 239 | 10 | 42 | 412 | 231 | 606 | 6.69e-52 | 185 |
| Msa1266060 | AT3G02065.3 | 30.750 | 400 | 260 | 7 | 6 | 394 | 80 | 473 | 7.36e-52 | 181 |
| Msa1266060 | AT3G02065.2 | 30.750 | 400 | 260 | 7 | 6 | 394 | 80 | 473 | 7.36e-52 | 181 |
| Msa1266060 | AT1G31970.1 | 32.713 | 376 | 235 | 6 | 41 | 403 | 117 | 487 | 2.96e-50 | 178 |
| Msa1266060 | AT3G18600.1 | 31.937 | 382 | 246 | 7 | 41 | 412 | 90 | 467 | 3.67e-50 | 178 |
| Msa1266060 | AT1G12770.2 | 27.163 | 416 | 241 | 6 | 41 | 396 | 111 | 524 | 1.11e-48 | 174 |
| Msa1266060 | AT1G12770.1 | 27.163 | 416 | 241 | 6 | 41 | 396 | 111 | 524 | 1.11e-48 | 174 |
| Msa1266060 | AT3G09720.2 | 29.843 | 382 | 259 | 5 | 34 | 412 | 138 | 513 | 1.36e-47 | 171 |
| Msa1266060 | AT3G09720.1 | 29.843 | 382 | 259 | 5 | 34 | 412 | 138 | 513 | 1.36e-47 | 171 |
| Msa1266060 | AT3G02065.1 | 32.523 | 329 | 209 | 6 | 77 | 394 | 10 | 336 | 7.59e-47 | 165 |
| Msa1266060 | AT3G09620.2 | 32.267 | 375 | 211 | 8 | 46 | 409 | 403 | 745 | 1.43e-46 | 172 |
| Msa1266060 | AT3G09620.1 | 32.267 | 375 | 211 | 8 | 46 | 409 | 402 | 744 | 1.52e-46 | 172 |
| Msa1266060 | AT5G65900.1 | 31.180 | 356 | 235 | 5 | 41 | 387 | 155 | 509 | 1.62e-45 | 166 |
| Msa1266060 | AT5G05450.1 | 29.737 | 380 | 239 | 9 | 50 | 404 | 26 | 402 | 6.37e-44 | 161 |
| Msa1266060 | AT5G63120.1 | 34.091 | 308 | 197 | 2 | 42 | 343 | 167 | 474 | 8.65e-44 | 159 |
| Msa1266060 | AT5G63120.3 | 34.091 | 308 | 197 | 2 | 42 | 343 | 167 | 474 | 9.07e-44 | 159 |
| Msa1266060 | AT5G63120.4 | 34.091 | 308 | 197 | 2 | 42 | 343 | 167 | 474 | 9.07e-44 | 159 |
| Msa1266060 | AT5G63120.5 | 34.091 | 308 | 197 | 2 | 42 | 343 | 167 | 474 | 9.07e-44 | 159 |
| Msa1266060 | AT5G62190.1 | 30.978 | 368 | 230 | 8 | 55 | 405 | 111 | 471 | 4.85e-43 | 160 |
| Msa1266060 | AT1G71370.1 | 30.056 | 356 | 233 | 7 | 47 | 387 | 23 | 377 | 2.28e-42 | 157 |
| Msa1266060 | AT5G14610.4 | 32.934 | 334 | 207 | 10 | 41 | 363 | 170 | 497 | 3.44e-41 | 152 |
| Msa1266060 | AT3G06480.2 | 32.198 | 323 | 206 | 6 | 39 | 352 | 434 | 752 | 1.36e-38 | 148 |
| Msa1266060 | AT5G63630.1 | 27.020 | 396 | 247 | 8 | 42 | 407 | 56 | 439 | 1.02e-37 | 143 |
| Msa1266060 | AT5G63630.2 | 27.020 | 396 | 247 | 8 | 42 | 407 | 250 | 633 | 1.55e-36 | 142 |
| Msa1266060 | AT2G07750.1 | 27.073 | 410 | 256 | 11 | 29 | 407 | 362 | 759 | 2.55e-36 | 141 |
| Msa1266060 | AT5G08620.1 | 27.822 | 381 | 240 | 6 | 42 | 395 | 82 | 454 | 3.78e-36 | 139 |
| Msa1266060 | AT5G08610.1 | 27.297 | 381 | 242 | 6 | 42 | 395 | 384 | 756 | 1.04e-35 | 140 |
| Msa1266060 | AT5G11200.2 | 37.247 | 247 | 140 | 6 | 27 | 267 | 32 | 269 | 1.06e-34 | 134 |
| Msa1266060 | AT5G11200.2 | 37.356 | 174 | 106 | 3 | 238 | 409 | 306 | 478 | 5.13e-29 | 118 |
| Msa1266060 | AT1G63250.1 | 27.047 | 403 | 253 | 10 | 35 | 407 | 321 | 712 | 2.85e-34 | 135 |
| Msa1266060 | AT4G34910.1 | 26.166 | 386 | 228 | 7 | 41 | 372 | 47 | 429 | 3.61e-33 | 131 |
| Msa1266060 | AT5G54910.1 | 27.763 | 371 | 244 | 10 | 42 | 396 | 73 | 435 | 2.97e-32 | 129 |
| Msa1266060 | AT5G19210.2 | 27.551 | 392 | 234 | 12 | 49 | 402 | 85 | 464 | 1.87e-31 | 125 |
| Msa1266060 | AT2G40700.1 | 25.393 | 445 | 249 | 13 | 41 | 403 | 31 | 474 | 1.99e-31 | 126 |
| Msa1266060 | AT3G16840.2 | 25.968 | 439 | 238 | 11 | 39 | 400 | 190 | 618 | 1.21e-30 | 125 |
| Msa1266060 | AT3G16840.1 | 25.968 | 439 | 238 | 11 | 39 | 400 | 189 | 617 | 1.44e-30 | 124 |
| Msa1266060 | AT4G09730.1 | 25.773 | 388 | 252 | 9 | 37 | 396 | 109 | 488 | 1.89e-30 | 124 |
| Msa1266060 | AT1G71280.2 | 29.073 | 313 | 180 | 10 | 47 | 345 | 24 | 308 | 6.39e-29 | 115 |
| Msa1266060 | AT3G06980.1 | 28.900 | 391 | 236 | 13 | 41 | 394 | 375 | 760 | 9.84e-29 | 119 |
| Msa1266060 | AT1G71280.1 | 29.167 | 312 | 181 | 9 | 47 | 345 | 24 | 308 | 5.04e-28 | 115 |
| Msa1266060 | AT4G15850.1 | 25.066 | 379 | 208 | 13 | 79 | 387 | 74 | 446 | 4.42e-25 | 107 |
| Msa1266060 | AT5G19210.1 | 26.006 | 323 | 179 | 11 | 123 | 402 | 2 | 307 | 1.80e-17 | 83.2 |
| Msa1266060 | AT5G19210.3 | 26.006 | 323 | 179 | 11 | 123 | 402 | 2 | 307 | 1.80e-17 | 83.2 |
| Msa1266060 | AT1G28180.2 | 38.095 | 126 | 55 | 4 | 63 | 177 | 5 | 118 | 5.10e-14 | 68.9 |
Find 147 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCATTGTTGAATTCATTAT+TGG | 0.154821 | 8_2:-70781668 | Msa1266060:three_prime_UTR |
| TTCCTTCGTGACAAAGTTAA+TGG | 0.209772 | 8_2:+70781950 | None:intergenic |
| AAAGACGACACTTGTTAAAA+TGG | 0.238528 | 8_2:-70785988 | Msa1266060:five_prime_UTR |
| ATTATGCGTGAATTCCGTTC+TGG | 0.257405 | 8_2:-70782125 | Msa1266060:CDS |
| AAGCAGAAATAAAACCAAAA+AGG | 0.257431 | 8_2:+70781766 | None:intergenic |
| ACAAACATCTTGATGTAATC+TGG | 0.288428 | 8_2:+70783310 | None:intergenic |
| CTAACACATTGTAAAACTTC+TGG | 0.300063 | 8_2:+70781904 | None:intergenic |
| CGCTAGTTGGTCAAACTAAC+TGG | 0.301312 | 8_2:+70785916 | None:intergenic |
| CGGAGTTAGTTAACGGAGTT+AGG | 0.302052 | 8_2:+70785724 | None:intergenic |
| ACTAATTTCCGACTAATATA+TGG | 0.309434 | 8_2:+70781829 | None:intergenic |
| CAGCTGATGGAGATGAATTC+TGG | 0.313882 | 8_2:-70784806 | Msa1266060:CDS |
| TAGTCGGAAATTAGTACTTT+TGG | 0.320355 | 8_2:-70781821 | Msa1266060:three_prime_UTR |
| GAATTCATTATTGGCCAAAT+TGG | 0.323036 | 8_2:-70781659 | Msa1266060:three_prime_UTR |
| GACACTTGTTAAAATGGTTT+TGG | 0.326020 | 8_2:-70785982 | Msa1266060:five_prime_UTR |
| TTGACTGAGAGGGGTAAATT+AGG | 0.328799 | 8_2:-70785893 | Msa1266060:five_prime_UTR |
| CACTCTTACTTATTTCTAGA+AGG | 0.332605 | 8_2:-70781625 | Msa1266060:three_prime_UTR |
| AAACTGCTTAATACCCTCTA+AGG | 0.342172 | 8_2:+70782340 | None:intergenic |
| TCAACTCCGCGGCGTAGATC+CGG | 0.346393 | 8_2:-70785763 | Msa1266060:five_prime_UTR |
| TTCTATCTTGCAGTTATGGC+TGG | 0.354302 | 8_2:-70785008 | Msa1266060:intron |
| TTTGAAGTTGTCTGAATATC+GGG | 0.356229 | 8_2:-70781700 | Msa1266060:three_prime_UTR |
| GCGTGATGAGCTTACCTTAG+AGG | 0.362955 | 8_2:-70782354 | Msa1266060:CDS |
| GTGAGTGTCTAACACCAATT+TGG | 0.377530 | 8_2:+70781645 | None:intergenic |
| TTCTCGAGGTTTCAAAGATC+AGG | 0.384116 | 8_2:-70783263 | Msa1266060:intron |
| CAACAGGCTCAGTCTGGAAC+CGG | 0.398765 | 8_2:-70783604 | Msa1266060:CDS |
| ATACGATAAAACCAAGCAAC+AGG | 0.405290 | 8_2:+70785831 | None:intergenic |
| CTTTACCTTACCCTGTTGCT+TGG | 0.405864 | 8_2:-70785842 | Msa1266060:five_prime_UTR |
| TTATGCGTGAATTCCGTTCT+GGG | 0.406482 | 8_2:-70782124 | Msa1266060:CDS |
| CATAATATCAACGAGTCTAA+TGG | 0.408740 | 8_2:+70781494 | None:intergenic |
| TTATGTCAATGTTGAGAAAG+AGG | 0.412746 | 8_2:-70782318 | Msa1266060:CDS |
| CAACTCCGCGGCGTAGATCC+GGG | 0.416571 | 8_2:-70785762 | Msa1266060:five_prime_UTR |
| CTCAGGGGCATTTATGCATA+TGG | 0.421726 | 8_2:-70784726 | Msa1266060:intron |
| GGGACTTGATGTTATTCAAC+AGG | 0.422508 | 8_2:-70783620 | Msa1266060:CDS |
| AGAAGCTCAGCAACATTTGA+TGG | 0.425416 | 8_2:+70781870 | None:intergenic |
| TTCGGTTTAATCCACTTTCA+AGG | 0.427640 | 8_2:-70785695 | Msa1266060:intron |
| TCACATTGTAGTCAAGTTGC+TGG | 0.431595 | 8_2:+70783551 | None:intergenic |
| CTTTGTCTGTTTGATAGTCT+TGG | 0.431769 | 8_2:-70781738 | Msa1266060:three_prime_UTR |
| TGTGACTCAGTGCCAGGCCT+TGG | 0.434416 | 8_2:-70783533 | Msa1266060:CDS |
| TTATAACCAGAGACACTTGT+TGG | 0.437621 | 8_2:+70782051 | None:intergenic |
| GTTATTCAACAGGCTCAGTC+TGG | 0.446972 | 8_2:-70783610 | Msa1266060:CDS |
| GATCTACGCCGCGGAGTTGA+GGG | 0.454750 | 8_2:+70785766 | None:intergenic |
| CTTGTGATCTCAAGTGCCTC+AGG | 0.456300 | 8_2:+70782413 | None:intergenic |
| GCCATCTGCTATTCAGCAAA+GGG | 0.457115 | 8_2:-70783662 | Msa1266060:CDS |
| CATGTTGTGGTTGGTACTCC+TGG | 0.466328 | 8_2:-70783370 | Msa1266060:CDS |
| TGGAGACTATCTAGGTGTTA+AGG | 0.466474 | 8_2:-70783455 | Msa1266060:CDS |
| TGATGTCCAACAAGTGTCTC+TGG | 0.467134 | 8_2:-70782057 | Msa1266060:CDS |
| AAGCAACAGGGTAAGGTAAA+GGG | 0.468637 | 8_2:+70785844 | None:intergenic |
| CGTGAGTAGCTGAGACTGTA+TGG | 0.474930 | 8_2:+70782177 | None:intergenic |
| ATTGGTCGTAGTGGAAGGTT+TGG | 0.483022 | 8_2:-70781987 | Msa1266060:CDS |
| CTACAATGTGACTCAGTGCC+AGG | 0.484625 | 8_2:-70783539 | Msa1266060:CDS |
| GAGAAGGTTATGCGTGCGCT+TGG | 0.485297 | 8_2:-70783475 | Msa1266060:CDS |
| CAAGCAACAGGGTAAGGTAA+AGG | 0.487292 | 8_2:+70785843 | None:intergenic |
| AAAACAGCAACTTTCTGCTC+TGG | 0.488201 | 8_2:-70783580 | Msa1266060:CDS |
| TCTCTCAGGATTGCAGCTGA+TGG | 0.488638 | 8_2:-70784819 | Msa1266060:intron |
| CGTGCGCTTGGAGACTATCT+AGG | 0.494302 | 8_2:-70783463 | Msa1266060:CDS |
| CAAACATCTTGATGTAATCT+GGG | 0.495526 | 8_2:+70783311 | None:intergenic |
| ACACCAGGAGGAAAGTTGAT+TGG | 0.496681 | 8_2:-70782226 | Msa1266060:CDS |
| GAGGGGTCACAATTCGATGC+TGG | 0.497994 | 8_2:-70784975 | Msa1266060:CDS |
| TGAGAAAGAGGAGTGGAAGC+TGG | 0.499050 | 8_2:-70782306 | Msa1266060:CDS |
| CCCTCTCAGTCAACGCTAGT+TGG | 0.499173 | 8_2:+70785903 | None:intergenic |
| AGCATCGAATTGTGACCCCT+CGG | 0.501118 | 8_2:+70784977 | None:intergenic |
| GATAGTTCTCAGGCTGGGTA+GGG | 0.504928 | 8_2:+70782018 | None:intergenic |
| TGGAATGAGGGAAACGGAAA+AGG | 0.507036 | 8_2:-70785959 | Msa1266060:five_prime_UTR |
| AGTGGAAGGTTTGGTAGAAA+AGG | 0.507500 | 8_2:-70781978 | Msa1266060:CDS |
| ATCAAGTGGTGTTCATGTTG+TGG | 0.507583 | 8_2:-70783383 | Msa1266060:CDS |
| TTTAATAACTACCGATCTGT+TGG | 0.509076 | 8_2:-70782090 | Msa1266060:CDS |
| TAGCTGAGACTGTATGGTCT+CGG | 0.513297 | 8_2:+70782183 | None:intergenic |
| GGATCTACGCCGCGGAGTTG+AGG | 0.513351 | 8_2:+70785765 | None:intergenic |
| GATATCTTTCAGCTGCTGCC+AGG | 0.515537 | 8_2:-70782473 | Msa1266060:CDS |
| TAAAACCAAGCAACAGGGTA+AGG | 0.520451 | 8_2:+70785837 | None:intergenic |
| AGGGGTCACAATTCGATGCT+GGG | 0.520845 | 8_2:-70784974 | Msa1266060:CDS |
| CTCTGCTACAATGCCTCCTG+AGG | 0.521626 | 8_2:-70782429 | Msa1266060:CDS |
| GAGAACTATCTCCATCGTAT+TGG | 0.523557 | 8_2:-70782005 | Msa1266060:CDS |
| GCATCGAATTGTGACCCCTC+GGG | 0.523997 | 8_2:+70784978 | None:intergenic |
| GGAGTTAGTTAACGGAGTTA+GGG | 0.527772 | 8_2:+70785725 | None:intergenic |
| ATAGCGAGATACCTTGAAAG+TGG | 0.529238 | 8_2:+70785684 | None:intergenic |
| ATCGTATTGGTCGTAGTGGA+AGG | 0.529668 | 8_2:-70781992 | Msa1266060:CDS |
| AAAGCGACGGAGTTAGTTAA+CGG | 0.531964 | 8_2:+70785717 | None:intergenic |
| CCCCTTTGCTGAATAGCAGA+TGG | 0.532541 | 8_2:+70783661 | None:intergenic |
| TGCTGAGCAAGCTCACGAGT+TGG | 0.532963 | 8_2:+70783502 | None:intergenic |
| TTTGTCCTCCATATATTAGT+CGG | 0.533852 | 8_2:-70781837 | Msa1266060:three_prime_UTR |
| TTACATCAAGATGTTTGTGT+TGG | 0.535747 | 8_2:-70783305 | Msa1266060:CDS |
| GTTTGTTAGAGAATCTCCTC+AGG | 0.536968 | 8_2:-70784743 | Msa1266060:CDS |
| CAACCAATCAACTTTCCTCC+TGG | 0.537041 | 8_2:+70782223 | None:intergenic |
| CTCAGCTACTCACGGAGACA+TGG | 0.539056 | 8_2:-70782168 | Msa1266060:CDS |
| AACATCAAGTCCCTTGCAGA+AGG | 0.540831 | 8_2:+70783630 | None:intergenic |
| CTCCATCGTATTGGTCGTAG+TGG | 0.541717 | 8_2:-70781996 | Msa1266060:CDS |
| TTCACGCATAATAATGTCCC+TGG | 0.549331 | 8_2:+70782136 | None:intergenic |
| CGTGATGAGCTTACCTTAGA+GGG | 0.550253 | 8_2:-70782353 | Msa1266060:CDS |
| GACCAACGTATTCTATCAAG+TGG | 0.551798 | 8_2:-70783397 | Msa1266060:CDS |
| AGATAGTTCTCAGGCTGGGT+AGG | 0.552286 | 8_2:+70782017 | None:intergenic |
| ACCAACTAGCGTTGACTGAG+AGG | 0.554134 | 8_2:-70785904 | Msa1266060:five_prime_UTR |
| ATACGATGGAGATAGTTCTC+AGG | 0.557654 | 8_2:+70782008 | None:intergenic |
| CGCTTCACAAGGATCCTCAC+AGG | 0.561401 | 8_2:+70782374 | None:intergenic |
| CTGAGGCACTTGAGATCACA+AGG | 0.563772 | 8_2:-70782412 | Msa1266060:CDS |
| AGCATATCAAACACACGACC+AGG | 0.568622 | 8_2:+70783352 | None:intergenic |
| AGTGGTGTTCATGTTGTGGT+TGG | 0.573575 | 8_2:-70783379 | Msa1266060:CDS |
| AACAGGCTCAGTCTGGAACC+GGG | 0.573707 | 8_2:-70783603 | Msa1266060:CDS |
| ACTCCTACTTGAATCTTACC+TGG | 0.574870 | 8_2:+70782455 | None:intergenic |
| AGCCATCTGCTATTCAGCAA+AGG | 0.576198 | 8_2:-70783663 | Msa1266060:CDS |
| GATGGAGATAGTTCTCAGGC+TGG | 0.577660 | 8_2:+70782012 | None:intergenic |
| ATGGCTGGACTTGCACCCGA+GGG | 0.585147 | 8_2:-70784993 | Msa1266060:CDS |
| AACTCCGCGGCGTAGATCCG+GGG | 0.585487 | 8_2:-70785761 | Msa1266060:five_prime_UTR |
| ATTCTGGACTTCTTATGATG+AGG | 0.585617 | 8_2:-70784790 | Msa1266060:CDS |
| AGTTCTCAGGCTGGGTAGGG+AGG | 0.588214 | 8_2:+70782021 | None:intergenic |
| CAAGATGTTTGTGTTGGATG+AGG | 0.589017 | 8_2:-70783299 | Msa1266060:CDS |
| TTGGAGCTAAAACCAAGGCC+TGG | 0.589196 | 8_2:+70783521 | None:intergenic |
| TTTGTCACGAAGGAAGATGA+AGG | 0.595012 | 8_2:-70781942 | Msa1266060:CDS |
| TATGGCTGGACTTGCACCCG+AGG | 0.596497 | 8_2:-70784994 | Msa1266060:CDS |
| CCAACTAGCGTTGACTGAGA+GGG | 0.600177 | 8_2:-70785903 | Msa1266060:five_prime_UTR |
| GCTGATGAAATGCTTTCTCG+AGG | 0.601323 | 8_2:-70783277 | Msa1266060:CDS |
| GAGACATGGATCAAAATACC+AGG | 0.602543 | 8_2:-70782154 | Msa1266060:CDS |
| CTGCCAGGTAAGATTCAAGT+AGG | 0.602744 | 8_2:-70782458 | Msa1266060:CDS |
| GCTTGCTCAGCAGATTGAGA+AGG | 0.608979 | 8_2:-70783491 | Msa1266060:CDS |
| GGGGATAGTTCCCTTCTGCA+AGG | 0.611798 | 8_2:-70783641 | Msa1266060:CDS |
| GGGATAGTTCCCTTCTGCAA+GGG | 0.612393 | 8_2:-70783640 | Msa1266060:CDS |
| ATGGAGATAGTTCTCAGGCT+GGG | 0.613686 | 8_2:+70782013 | None:intergenic |
| ACATCAAGTCCCTTGCAGAA+GGG | 0.620896 | 8_2:+70783631 | None:intergenic |
| CAACTAGCGTTGACTGAGAG+GGG | 0.630133 | 8_2:-70785902 | Msa1266060:five_prime_UTR |
| TTTGTTAGAGAATCTCCTCA+GGG | 0.631297 | 8_2:-70784742 | Msa1266060:CDS |
| AAGGTGCATGCTTGTGTCGG+AGG | 0.632831 | 8_2:-70783436 | Msa1266060:CDS |
| ACTACCGATCTGTTGGCTCG+TGG | 0.635749 | 8_2:-70782083 | Msa1266060:CDS |
| TTCCACTACGACCAATACGA+TGG | 0.638034 | 8_2:+70781994 | None:intergenic |
| TAAGCTCATCACGCTTCACA+AGG | 0.638139 | 8_2:+70782363 | None:intergenic |
| TCAATGTTGAGAAAGAGGAG+TGG | 0.638471 | 8_2:-70782313 | Msa1266060:CDS |
| AGTTGTCTGAATATCGGGGT+AGG | 0.638841 | 8_2:-70781695 | Msa1266060:three_prime_UTR |
| GTGATCTCAAGTGCCTCAGG+AGG | 0.642550 | 8_2:+70782416 | None:intergenic |
| TGCCATTAACTTTGTCACGA+AGG | 0.643459 | 8_2:-70781952 | Msa1266060:CDS |
| GTTAAGGTGCATGCTTGTGT+CGG | 0.644815 | 8_2:-70783439 | Msa1266060:CDS |
| ACGAGTTGGAGCTAAAACCA+AGG | 0.644823 | 8_2:+70783516 | None:intergenic |
| TGGATTAAACCGAAAAGCGA+CGG | 0.648057 | 8_2:+70785704 | None:intergenic |
| AAACACGAGAAGACCCAGAA+CGG | 0.652225 | 8_2:+70782111 | None:intergenic |
| TTGAAGTTGTCTGAATATCG+GGG | 0.659994 | 8_2:-70781699 | Msa1266060:three_prime_UTR |
| CATACAGTCTCAGCTACTCA+CGG | 0.666004 | 8_2:-70782176 | Msa1266060:CDS |
| TACGATAAAACCAAGCAACA+GGG | 0.666972 | 8_2:+70785832 | None:intergenic |
| AATTTCCGACTAATATATGG+AGG | 0.667446 | 8_2:+70781832 | None:intergenic |
| CATCTGCTATTCAGCAAAGG+GGG | 0.672902 | 8_2:-70783660 | Msa1266060:CDS |
| AATACCACGAGCCAACAGAT+CGG | 0.674449 | 8_2:+70782079 | None:intergenic |
| TGGCTGGACTTGCACCCGAG+GGG | 0.685827 | 8_2:-70784992 | Msa1266060:CDS |
| CCATCTGCTATTCAGCAAAG+GGG | 0.689569 | 8_2:-70783661 | Msa1266060:CDS |
| CACCACTTGATAGAATACGT+TGG | 0.711575 | 8_2:+70783395 | None:intergenic |
| AGACATGGATCAAAATACCA+GGG | 0.718305 | 8_2:-70782153 | Msa1266060:CDS |
| CATATGCATAAATGCCCCTG+AGG | 0.718966 | 8_2:+70784727 | None:intergenic |
| AACTCCCCGGATCTACGCCG+CGG | 0.720835 | 8_2:+70785757 | None:intergenic |
| AATTGTGTGATGAGACGTAG+TGG | 0.741003 | 8_2:-70781517 | Msa1266060:three_prime_UTR |
| TTGTTAGAGAATCTCCTCAG+GGG | 0.744236 | 8_2:-70784741 | Msa1266060:CDS |
| AGTTTATGAACAAACCTGTG+AGG | 0.746705 | 8_2:-70782388 | Msa1266060:CDS |
| GAGTTGAGGGATGAAAACGA+AGG | 0.764414 | 8_2:+70785779 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTAAAAATTCAAAATATA+TGG | - | chr8_2:70783657-70783676 | Msa1266060:CDS | 10.0% |
| !! | TAAAATAAGATAGAAATAGT+TGG | + | chr8_2:70781946-70781965 | None:intergenic | 15.0% |
| !!! | AGTTACAACATTTTTTTTTT+TGG | + | chr8_2:70783399-70783418 | None:intergenic | 15.0% |
| !! | TATGTTATAACTGTTATGTT+AGG | - | chr8_2:70782130-70782149 | Msa1266060:CDS | 20.0% |
| !! | TAGTACATGAAAAAAATGAA+GGG | + | chr8_2:70782532-70782551 | None:intergenic | 20.0% |
| !!! | TGTTTTAATGTAGGAATTTT+TGG | - | chr8_2:70782555-70782574 | Msa1266060:intron | 20.0% |
| !! | TGAAATCATTATTACTAGTT+TGG | - | chr8_2:70782584-70782603 | Msa1266060:intron | 20.0% |
| !! | TATATTGTTCTTAATGTCTT+TGG | - | chr8_2:70782766-70782785 | Msa1266060:intron | 20.0% |
| !! | GAAAAAGAGACTTATAAAAA+GGG | + | chr8_2:70782838-70782857 | None:intergenic | 20.0% |
| !! | TGAAAAAGAGACTTATAAAA+AGG | + | chr8_2:70782839-70782858 | None:intergenic | 20.0% |
| !! | TCACATATATTGAGAAAAAT+TGG | - | chr8_2:70782863-70782882 | Msa1266060:intron | 20.0% |
| !!! | TTTTTGAATTAAGACTACAA+GGG | + | chr8_2:70783161-70783180 | None:intergenic | 20.0% |
| !!! | TTTTTTGAATTAAGACTACA+AGG | + | chr8_2:70783162-70783181 | None:intergenic | 20.0% |
| !!! | TTGAATTTTTAAGAGTACAA+CGG | + | chr8_2:70783651-70783670 | None:intergenic | 20.0% |
| !! | TACAACAATTATGAAATAGA+TGG | + | chr8_2:70784213-70784232 | None:intergenic | 20.0% |
| !!! | TTAAGTGTTTTGTTTCTTTT+TGG | - | chr8_2:70784436-70784455 | Msa1266060:intron | 20.0% |
| !!! | TAAGAATTTAACCTTTTTTC+TGG | - | chr8_2:70784866-70784885 | Msa1266060:intron | 20.0% |
| ! | TGAAAGTGAAATATGAAAGA+TGG | + | chr8_2:70781800-70781819 | None:intergenic | 25.0% |
| !!! | TGTTTCATGTTTTAACTGTT+AGG | - | chr8_2:70782007-70782026 | Msa1266060:CDS | 25.0% |
| !!! | TTTGTGTTGTTTTATACTGT+TGG | - | chr8_2:70782056-70782075 | Msa1266060:CDS | 25.0% |
| !!! | TTGTGTTGTTTTATACTGTT+GGG | - | chr8_2:70782057-70782076 | Msa1266060:CDS | 25.0% |
| ! | TCTCACTTATGTAATTTAGT+CGG | + | chr8_2:70782186-70782205 | None:intergenic | 25.0% |
| ! | ATTACATAAGTGAGACAATT+TGG | - | chr8_2:70782191-70782210 | Msa1266060:CDS | 25.0% |
| ! | TTACATAAGTGAGACAATTT+GGG | - | chr8_2:70782192-70782211 | Msa1266060:CDS | 25.0% |
| ! | TTCAAGATAGCTTATGAAAA+TGG | - | chr8_2:70782258-70782277 | Msa1266060:CDS | 25.0% |
| ! | CTAGTACATGAAAAAAATGA+AGG | + | chr8_2:70782533-70782552 | None:intergenic | 25.0% |
| !!! | GTACTAGTTTGTTTTAATGT+AGG | - | chr8_2:70782546-70782565 | Msa1266060:intron | 25.0% |
| !!! | GTTTGGTTACCTTTTTTTTA+TGG | - | chr8_2:70782601-70782620 | Msa1266060:intron | 25.0% |
| ! | GAGAAAAAGCCATAAAAAAA+AGG | + | chr8_2:70782613-70782632 | None:intergenic | 25.0% |
| !!! | TTATGATAGTTTTGATGCTA+TGG | - | chr8_2:70782682-70782701 | Msa1266060:intron | 25.0% |
| !!! | TATGATAGTTTTGATGCTAT+GGG | - | chr8_2:70782683-70782702 | Msa1266060:intron | 25.0% |
| !! | AGAGAATAACAATATTTTCC+AGG | + | chr8_2:70782804-70782823 | None:intergenic | 25.0% |
| !! | AATATTGTTATTCTCTGTCA+TGG | - | chr8_2:70782808-70782827 | Msa1266060:intron | 25.0% |
| !!! | CAGTTTGCTAAAAAAAATAG+TGG | + | chr8_2:70783336-70783355 | None:intergenic | 25.0% |
| ! | GTGCATAACTAATTAACTAT+TGG | - | chr8_2:70783433-70783452 | Msa1266060:CDS | 25.0% |
| ! | TTTGAAAGATGCCTTATATT+TGG | - | chr8_2:70783569-70783588 | Msa1266060:CDS | 25.0% |
| ! | TTGAAAGATGCCTTATATTT+GGG | - | chr8_2:70783570-70783589 | Msa1266060:CDS | 25.0% |
| ! | GACTAATTATAAGGACAATT+TGG | + | chr8_2:70783608-70783627 | None:intergenic | 25.0% |
| ! | ATTGTCCTTATAATTAGTCA+TGG | - | chr8_2:70783609-70783628 | Msa1266060:CDS | 25.0% |
| !!! | TATTGTTTTTTTCTCTACGA+TGG | - | chr8_2:70783717-70783736 | Msa1266060:intron | 25.0% |
| !!! | ATTGTTTTTTTCTCTACGAT+GGG | - | chr8_2:70783718-70783737 | Msa1266060:intron | 25.0% |
| ! | GTAATTGACAAAAGTGAAAA+AGG | + | chr8_2:70784238-70784257 | None:intergenic | 25.0% |
| ! | ACATAAAAAAACAACACAGA+AGG | + | chr8_2:70784264-70784283 | None:intergenic | 25.0% |
| ! | AAAAGTAAAAAGACAAGTGT+GGG | + | chr8_2:70784293-70784312 | None:intergenic | 25.0% |
| ! | ATGAAGCAGAAATAAGAAAA+TGG | + | chr8_2:70784396-70784415 | None:intergenic | 25.0% |
| !!! | GTTTCTTTTTGGAATTTTGA+CGG | - | chr8_2:70784447-70784466 | Msa1266060:intron | 25.0% |
| !!! | TTTCTTTTTGGAATTTTGAC+GGG | - | chr8_2:70784448-70784467 | Msa1266060:intron | 25.0% |
| ! | GAAACTAAAAAATGAATTCG+GGG | + | chr8_2:70784648-70784667 | None:intergenic | 25.0% |
| ! | GGAAACTAAAAAATGAATTC+GGG | + | chr8_2:70784649-70784668 | None:intergenic | 25.0% |
| ! | GGGAAACTAAAAAATGAATT+CGG | + | chr8_2:70784650-70784669 | None:intergenic | 25.0% |
| !! | CAAAAGTAAAGTGTTTGTTT+GGG | + | chr8_2:70784786-70784805 | None:intergenic | 25.0% |
| ! | ACTAATTTCCGACTAATATA+TGG | + | chr8_2:70785622-70785641 | None:intergenic | 25.0% |
| ! | AGCAGAAATAAAACCAAAAA+GGG | + | chr8_2:70785684-70785703 | None:intergenic | 25.0% |
| ! | AAGCAGAAATAAAACCAAAA+AGG | + | chr8_2:70785685-70785704 | None:intergenic | 25.0% |
| !!! | TTTTGAAGTTGTCTGAATAT+CGG | - | chr8_2:70785747-70785766 | Msa1266060:five_prime_UTR | 25.0% |
| ! | TGCATTGTTGAATTCATTAT+TGG | - | chr8_2:70785780-70785799 | Msa1266060:five_prime_UTR | 25.0% |
| ! | AAAGACGACACTTGTTAAAA+TGG | - | chr8_2:70781460-70781479 | Msa1266060:three_prime_UTR | 30.0% |
| !! | GACACTTGTTAAAATGGTTT+TGG | - | chr8_2:70781466-70781485 | Msa1266060:three_prime_UTR | 30.0% |
| !!! | ACTTGTTAAAATGGTTTTGG+TGG | - | chr8_2:70781469-70781488 | Msa1266060:three_prime_UTR | 30.0% |
| AAATAGTTGGAAAAGCAAAG+AGG | + | chr8_2:70781933-70781952 | None:intergenic | 30.0% | |
| !!! | CATGTTTTAACTGTTAGGTT+AGG | - | chr8_2:70782012-70782031 | Msa1266060:CDS | 30.0% |
| !! | TTGTTTTATACTGTTGGGTT+AGG | - | chr8_2:70782062-70782081 | Msa1266060:CDS | 30.0% |
| !! | TGTTATGTTAGGTTAGCTTT+AGG | - | chr8_2:70782141-70782160 | Msa1266060:CDS | 30.0% |
| !! | GTTATGTTAGGTTAGCTTTA+GGG | - | chr8_2:70782142-70782161 | Msa1266060:CDS | 30.0% |
| AAACAACTTATTTGCAGGAA+TGG | + | chr8_2:70782364-70782383 | None:intergenic | 30.0% | |
| !! | TTTTTATGGCTTTTTCTCTC+AGG | - | chr8_2:70782615-70782634 | Msa1266060:intron | 30.0% |
| ! | TATTTTCCAGGTGTAAGTAA+AGG | + | chr8_2:70782792-70782811 | None:intergenic | 30.0% |
| ! | TGTGGAAACATTTTATGTGT+TGG | - | chr8_2:70782914-70782933 | Msa1266060:intron | 30.0% |
| ! | GTGGAAACATTTTATGTGTT+GGG | - | chr8_2:70782915-70782934 | Msa1266060:intron | 30.0% |
| AGTGAATGATTGTTACCAAA+CGG | + | chr8_2:70783046-70783065 | None:intergenic | 30.0% | |
| TTGGTTGAATTTGTAGTGTT+TGG | + | chr8_2:70783248-70783267 | None:intergenic | 30.0% | |
| TGAAAGATGCCTTATATTTG+GGG | - | chr8_2:70783571-70783590 | Msa1266060:CDS | 30.0% | |
| TCCTTATAATTAGTCATGGA+AGG | - | chr8_2:70783613-70783632 | Msa1266060:CDS | 30.0% | |
| TCCTTCCATGACTAATTATA+AGG | + | chr8_2:70783617-70783636 | None:intergenic | 30.0% | |
| ! | TAGACACTTTCTGTTTTCTT+TGG | - | chr8_2:70783694-70783713 | Msa1266060:intron | 30.0% |
| CAAACATCTTGATGTAATCT+GGG | + | chr8_2:70784140-70784159 | None:intergenic | 30.0% | |
| ACAAACATCTTGATGTAATC+TGG | + | chr8_2:70784141-70784160 | None:intergenic | 30.0% | |
| TTACATCAAGATGTTTGTGT+TGG | - | chr8_2:70784143-70784162 | Msa1266060:intron | 30.0% | |
| GAAAAGTAAAAAGACAAGTG+TGG | + | chr8_2:70784294-70784313 | None:intergenic | 30.0% | |
| TGAGAGTAGTATAACAAGAT+AGG | - | chr8_2:70784575-70784594 | Msa1266060:intron | 30.0% | |
| !!! | GAGGTTAATTTTTTCTCAAC+AGG | + | chr8_2:70784694-70784713 | None:intergenic | 30.0% |
| AAAAAATTAACCTCCATGCA+AGG | - | chr8_2:70784700-70784719 | Msa1266060:intron | 30.0% | |
| ! | CCAAAAGTAAAGTGTTTGTT+TGG | + | chr8_2:70784787-70784806 | None:intergenic | 30.0% |
| ! | CCAAACAAACACTTTACTTT+TGG | - | chr8_2:70784784-70784803 | Msa1266060:CDS | 30.0% |
| AATATGACTACAGACCAATA+AGG | + | chr8_2:70784892-70784911 | None:intergenic | 30.0% | |
| ATCTGATAACAAAAAAGCCA+AGG | + | chr8_2:70784951-70784970 | None:intergenic | 30.0% | |
| TTATGTCAATGTTGAGAAAG+AGG | - | chr8_2:70785130-70785149 | Msa1266060:intron | 30.0% | |
| TTTAATAACTACCGATCTGT+TGG | - | chr8_2:70785358-70785377 | Msa1266060:intron | 30.0% | |
| CTAACACATTGTAAAACTTC+TGG | + | chr8_2:70785547-70785566 | None:intergenic | 30.0% | |
| ! | GTTTTACAATGTGTTAGTTG+AGG | - | chr8_2:70785550-70785569 | Msa1266060:intron | 30.0% |
| TTTGTCCTCCATATATTAGT+CGG | - | chr8_2:70785611-70785630 | Msa1266060:intron | 30.0% | |
| AATTTCCGACTAATATATGG+AGG | + | chr8_2:70785619-70785638 | None:intergenic | 30.0% | |
| ! | TAGTCGGAAATTAGTACTTT+TGG | - | chr8_2:70785627-70785646 | Msa1266060:intron | 30.0% |
| AAATAAAACCAAAAAGGGGA+GGG | + | chr8_2:70785679-70785698 | None:intergenic | 30.0% | |
| GCAGAAATAAAACCAAAAAG+GGG | + | chr8_2:70785683-70785702 | None:intergenic | 30.0% | |
| ! | TTTGAAGTTGTCTGAATATC+GGG | - | chr8_2:70785748-70785767 | Msa1266060:five_prime_UTR | 30.0% |
| GAATTCATTATTGGCCAAAT+TGG | - | chr8_2:70785789-70785808 | Msa1266060:five_prime_UTR | 30.0% | |
| !! | CACTCTTACTTATTTCTAGA+AGG | - | chr8_2:70785823-70785842 | Msa1266060:five_prime_UTR | 30.0% |
| CATAATATCAACGAGTCTAA+TGG | + | chr8_2:70785957-70785976 | None:intergenic | 30.0% | |
| !!! | AAAATGGTTTTGGTGGAATG+AGG | - | chr8_2:70781476-70781495 | Msa1266060:three_prime_UTR | 35.0% |
| !!! | AAATGGTTTTGGTGGAATGA+GGG | - | chr8_2:70781477-70781496 | Msa1266060:three_prime_UTR | 35.0% |
| TACGATAAAACCAAGCAACA+GGG | + | chr8_2:70781619-70781638 | None:intergenic | 35.0% | |
| ATACGATAAAACCAAGCAAC+AGG | + | chr8_2:70781620-70781639 | None:intergenic | 35.0% | |
| TTCGGTTTAATCCACTTTCA+AGG | - | chr8_2:70781753-70781772 | Msa1266060:three_prime_UTR | 35.0% | |
| TGGCTAAACAACTTATTTGC+AGG | + | chr8_2:70782369-70782388 | None:intergenic | 35.0% | |
| !! | CTGTTTCTATCTTGCAGTTA+TGG | - | chr8_2:70782436-70782455 | Msa1266060:CDS | 35.0% |
| ATTCTGGACTTCTTATGATG+AGG | - | chr8_2:70782658-70782677 | Msa1266060:intron | 35.0% | |
| TTTGTTAGAGAATCTCCTCA+GGG | - | chr8_2:70782706-70782725 | Msa1266060:intron | 35.0% | |
| ! | ACATTTTATGTGTTGGGATG+TGG | - | chr8_2:70782921-70782940 | Msa1266060:intron | 35.0% |
| ! | CATTTTATGTGTTGGGATGT+GGG | - | chr8_2:70782922-70782941 | Msa1266060:intron | 35.0% |
| GTGAATGATTGTTACCAAAC+GGG | + | chr8_2:70783045-70783064 | None:intergenic | 35.0% | |
| CTTGTAAGGTAGCTAGTTAA+CGG | + | chr8_2:70783283-70783302 | None:intergenic | 35.0% | |
| AACAAAACACACATGCACTA+AGG | + | chr8_2:70783361-70783380 | None:intergenic | 35.0% | |
| GGAAGAAGAAAAGTCAATGT+TGG | + | chr8_2:70783484-70783503 | None:intergenic | 35.0% | |
| !! | TTGATGCTACTGATTTGTCT+TGG | + | chr8_2:70783505-70783524 | None:intergenic | 35.0% |
| GAAAGATGCCTTATATTTGG+GGG | - | chr8_2:70783572-70783591 | Msa1266060:CDS | 35.0% | |
| !! | AAAAAGTGCCCCCAAATATA+AGG | + | chr8_2:70783583-70783602 | None:intergenic | 35.0% |
| ACACTTAACAGAGCTGAAAA+TGG | + | chr8_2:70784424-70784443 | None:intergenic | 35.0% | |
| GAGTAGTATAACAAGATAGG+AGG | - | chr8_2:70784578-70784597 | Msa1266060:intron | 35.0% | |
| ATAACAAGATAGGAGGATCT+AGG | - | chr8_2:70784585-70784604 | Msa1266060:intron | 35.0% | |
| TAACAAGATAGGAGGATCTA+GGG | - | chr8_2:70784586-70784605 | Msa1266060:intron | 35.0% | |
| AGGAATTCGGATAATTATGG+AGG | + | chr8_2:70784625-70784644 | None:intergenic | 35.0% | |
| ACTAAAAAATGAATTCGGGG+AGG | + | chr8_2:70784645-70784664 | None:intergenic | 35.0% | |
| !!! | TTTTTAGTTTCCCCAACTTG+TGG | - | chr8_2:70784657-70784676 | Msa1266060:intron | 35.0% |
| !!! | TTTTAGTTTCCCCAACTTGT+GGG | - | chr8_2:70784658-70784677 | Msa1266060:intron | 35.0% |
| ! | AAGTAAAGTGTTTGTTTGGG+AGG | + | chr8_2:70784783-70784802 | None:intergenic | 35.0% |
| !!! | AACCTTTTTTCTGGCCTTAT+TGG | - | chr8_2:70784875-70784894 | Msa1266060:intron | 35.0% |
| TGATAACAAAAAAGCCAAGG+AGG | + | chr8_2:70784948-70784967 | None:intergenic | 35.0% | |
| AGTTTATGAACAAACCTGTG+AGG | - | chr8_2:70785060-70785079 | Msa1266060:intron | 35.0% | |
| AAACTGCTTAATACCCTCTA+AGG | + | chr8_2:70785111-70785130 | None:intergenic | 35.0% | |
| AAAAATGACACTCTGAGTGA+TGG | + | chr8_2:70785198-70785217 | None:intergenic | 35.0% | |
| AGACATGGATCAAAATACCA+GGG | - | chr8_2:70785295-70785314 | Msa1266060:intron | 35.0% | |
| TTATAACCAGAGACACTTGT+TGG | + | chr8_2:70785400-70785419 | None:intergenic | 35.0% | |
| TTCCTTCGTGACAAAGTTAA+TGG | + | chr8_2:70785501-70785520 | None:intergenic | 35.0% | |
| GAAATAAAACCAAAAAGGGG+AGG | + | chr8_2:70785680-70785699 | None:intergenic | 35.0% | |
| ! | CTTTGTCTGTTTGATAGTCT+TGG | - | chr8_2:70785710-70785729 | Msa1266060:five_prime_UTR | 35.0% |
| TTGAAGTTGTCTGAATATCG+GGG | - | chr8_2:70785749-70785768 | Msa1266060:five_prime_UTR | 35.0% | |
| ! | TTTTGGTGGAATGAGGGAAA+CGG | - | chr8_2:70781483-70781502 | Msa1266060:three_prime_UTR | 40.0% |
| TTGACTGAGAGGGGTAAATT+AGG | - | chr8_2:70781555-70781574 | Msa1266060:three_prime_UTR | 40.0% | |
| AAGCAACAGGGTAAGGTAAA+GGG | + | chr8_2:70781607-70781626 | None:intergenic | 40.0% | |
| TAAAACCAAGCAACAGGGTA+AGG | + | chr8_2:70781614-70781633 | None:intergenic | 40.0% | |
| GGAGTTAGTTAACGGAGTTA+GGG | + | chr8_2:70781726-70781745 | None:intergenic | 40.0% | |
| AAAGCGACGGAGTTAGTTAA+CGG | + | chr8_2:70781734-70781753 | None:intergenic | 40.0% | |
| !!! | TAACTAACTCCGTCGCTTTT+CGG | - | chr8_2:70781735-70781754 | Msa1266060:three_prime_UTR | 40.0% |
| TGGATTAAACCGAAAAGCGA+CGG | + | chr8_2:70781747-70781766 | None:intergenic | 40.0% | |
| ATAGCGAGATACCTTGAAAG+TGG | + | chr8_2:70781767-70781786 | None:intergenic | 40.0% | |
| TTTCACTTTCATCGCGACAA+TGG | - | chr8_2:70781809-70781828 | Msa1266060:three_prime_UTR | 40.0% | |
| AGACAATTTGGGCAAACGTA+TGG | - | chr8_2:70782203-70782222 | Msa1266060:CDS | 40.0% | |
| TTCTATCTTGCAGTTATGGC+TGG | - | chr8_2:70782440-70782459 | Msa1266060:CDS | 40.0% | |
| ! | GTTTGTTAGAGAATCTCCTC+AGG | - | chr8_2:70782705-70782724 | Msa1266060:intron | 40.0% |
| TTGTTAGAGAATCTCCTCAG+GGG | - | chr8_2:70782707-70782726 | Msa1266060:intron | 40.0% | |
| !! | TGGTAGAAGTGTTCCTTAGA+CGG | - | chr8_2:70782883-70782902 | Msa1266060:intron | 40.0% |
| AGTGTTCCTTAGACGGTAAA+AGG | - | chr8_2:70782890-70782909 | Msa1266060:intron | 40.0% | |
| ATGACGAAAAATGACCCGTT+TGG | - | chr8_2:70783028-70783047 | Msa1266060:intron | 40.0% | |
| ! | CTAATAGCGGAAGACTTGTA+AGG | + | chr8_2:70783297-70783316 | None:intergenic | 40.0% |
| GCTGTTAAGCTAGCTAATAG+CGG | + | chr8_2:70783310-70783329 | None:intergenic | 40.0% | |
| ACTAGTATGACTCGTGCTTT+AGG | - | chr8_2:70783754-70783773 | Msa1266060:intron | 40.0% | |
| GGGACTTGATGTTATTCAAC+AGG | - | chr8_2:70783828-70783847 | Msa1266060:intron | 40.0% | |
| AAAACAGCAACTTTCTGCTC+TGG | - | chr8_2:70783868-70783887 | Msa1266060:intron | 40.0% | |
| ! | TCACATTGTAGTCAAGTTGC+TGG | + | chr8_2:70783900-70783919 | None:intergenic | 40.0% |
| TGGAGACTATCTAGGTGTTA+AGG | - | chr8_2:70783993-70784012 | Msa1266060:intron | 40.0% | |
| GACCAACGTATTCTATCAAG+TGG | - | chr8_2:70784051-70784070 | Msa1266060:intron | 40.0% | |
| CACCACTTGATAGAATACGT+TGG | + | chr8_2:70784056-70784075 | None:intergenic | 40.0% | |
| ATCAAGTGGTGTTCATGTTG+TGG | - | chr8_2:70784065-70784084 | Msa1266060:intron | 40.0% | |
| CAAGATGTTTGTGTTGGATG+AGG | - | chr8_2:70784149-70784168 | Msa1266060:intron | 40.0% | |
| TTCTCGAGGTTTCAAAGATC+AGG | - | chr8_2:70784185-70784204 | Msa1266060:intron | 40.0% | |
| !!! | GGCTCACCTATTTTTGGATT+GGG | - | chr8_2:70784497-70784516 | Msa1266060:intron | 40.0% |
| CACACTCCCAATCCAAAAAT+AGG | + | chr8_2:70784506-70784525 | None:intergenic | 40.0% | |
| !! | TTGGATTGGGAGTGTGTTTT+TGG | - | chr8_2:70784510-70784529 | Msa1266060:intron | 40.0% |
| AACAAGATAGGAGGATCTAG+GGG | - | chr8_2:70784587-70784606 | Msa1266060:intron | 40.0% | |
| GGGAGGAATTCGGATAATTA+TGG | + | chr8_2:70784628-70784647 | None:intergenic | 40.0% | |
| AATGAATTCGGGGAGGAATT+CGG | + | chr8_2:70784638-70784657 | None:intergenic | 40.0% | |
| ! | TTTAGTTTCCCCAACTTGTG+GGG | - | chr8_2:70784659-70784678 | Msa1266060:intron | 40.0% |
| AAATTAACCTCCATGCAAGG+TGG | - | chr8_2:70784703-70784722 | Msa1266060:intron | 40.0% | |
| AATTAACCTCCATGCAAGGT+GGG | - | chr8_2:70784704-70784723 | Msa1266060:intron | 40.0% | |
| AAAGAGGAAGAGAAGGGAAA+TGG | + | chr8_2:70784745-70784764 | None:intergenic | 40.0% | |
| GACCAATAAGGCCAGAAAAA+AGG | + | chr8_2:70784880-70784899 | None:intergenic | 40.0% | |
| AAAAGCCAAGGAGGTTAAAG+CGG | + | chr8_2:70784939-70784958 | None:intergenic | 40.0% | |
| ACTCCTACTTGAATCTTACC+TGG | + | chr8_2:70784996-70785015 | None:intergenic | 40.0% | |
| TCAATGTTGAGAAAGAGGAG+TGG | - | chr8_2:70785135-70785154 | Msa1266060:intron | 40.0% | |
| !!! | GTGTCATTTTTGTGAACACC+AGG | - | chr8_2:70785207-70785226 | Msa1266060:intron | 40.0% |
| !! | TCATTTTTGTGAACACCAGG+AGG | - | chr8_2:70785210-70785229 | Msa1266060:intron | 40.0% |
| GAGACATGGATCAAAATACC+AGG | - | chr8_2:70785294-70785313 | Msa1266060:intron | 40.0% | |
| TTCACGCATAATAATGTCCC+TGG | + | chr8_2:70785315-70785334 | None:intergenic | 40.0% | |
| ATTATGCGTGAATTCCGTTC+TGG | - | chr8_2:70785323-70785342 | Msa1266060:intron | 40.0% | |
| TTATGCGTGAATTCCGTTCT+GGG | - | chr8_2:70785324-70785343 | Msa1266060:intron | 40.0% | |
| ATACGATGGAGATAGTTCTC+AGG | + | chr8_2:70785443-70785462 | None:intergenic | 40.0% | |
| GAGAACTATCTCCATCGTAT+TGG | - | chr8_2:70785443-70785462 | Msa1266060:intron | 40.0% | |
| ! | AGTGGAAGGTTTGGTAGAAA+AGG | - | chr8_2:70785470-70785489 | Msa1266060:intron | 40.0% |
| TGCCATTAACTTTGTCACGA+AGG | - | chr8_2:70785496-70785515 | Msa1266060:intron | 40.0% | |
| TTTGTCACGAAGGAAGATGA+AGG | - | chr8_2:70785506-70785525 | Msa1266060:intron | 40.0% | |
| AGAAGCTCAGCAACATTTGA+TGG | + | chr8_2:70785581-70785600 | None:intergenic | 40.0% | |
| GTGAGTGTCTAACACCAATT+TGG | + | chr8_2:70785806-70785825 | None:intergenic | 40.0% | |
| AATTGTGTGATGAGACGTAG+TGG | - | chr8_2:70785931-70785950 | Msa1266060:five_prime_UTR | 40.0% | |
| TGGAATGAGGGAAACGGAAA+AGG | - | chr8_2:70781489-70781508 | Msa1266060:three_prime_UTR | 45.0% | |
| CGCTAGTTGGTCAAACTAAC+TGG | + | chr8_2:70781535-70781554 | None:intergenic | 45.0% | |
| CAAGCAACAGGGTAAGGTAA+AGG | + | chr8_2:70781608-70781627 | None:intergenic | 45.0% | |
| CTTTACCTTACCCTGTTGCT+TGG | - | chr8_2:70781606-70781625 | Msa1266060:three_prime_UTR | 45.0% | |
| GAGTTGAGGGATGAAAACGA+AGG | + | chr8_2:70781672-70781691 | None:intergenic | 45.0% | |
| CGGAGTTAGTTAACGGAGTT+AGG | + | chr8_2:70781727-70781746 | None:intergenic | 45.0% | |
| AGCACGAGTAAGGAGTTGTT+TGG | + | chr8_2:70782389-70782408 | None:intergenic | 45.0% | |
| CAACAAGATCAGCACGAGTA+AGG | + | chr8_2:70782399-70782418 | None:intergenic | 45.0% | |
| CAGCTGATGGAGATGAATTC+TGG | - | chr8_2:70782642-70782661 | Msa1266060:intron | 45.0% | |
| CATATGCATAAATGCCCCTG+AGG | + | chr8_2:70782724-70782743 | None:intergenic | 45.0% | |
| !! | CTCAGGGGCATTTATGCATA+TGG | - | chr8_2:70782722-70782741 | Msa1266060:intron | 45.0% |
| ! | CTTTGGCCTTTACTTACACC+TGG | - | chr8_2:70782783-70782802 | Msa1266060:intron | 45.0% |
| ! | CCACAACCTTTTACCGTCTA+AGG | + | chr8_2:70782899-70782918 | None:intergenic | 45.0% |
| CCTTAGACGGTAAAAGGTTG+TGG | - | chr8_2:70782896-70782915 | Msa1266060:intron | 45.0% | |
| TACCCCAATTCTCTGCACTT+AGG | - | chr8_2:70782958-70782977 | Msa1266060:intron | 45.0% | |
| ACCCCAATTCTCTGCACTTA+GGG | - | chr8_2:70782959-70782978 | Msa1266060:intron | 45.0% | |
| ACCCTAAGTGCAGAGAATTG+GGG | + | chr8_2:70782963-70782982 | None:intergenic | 45.0% | |
| GACCCTAAGTGCAGAGAATT+GGG | + | chr8_2:70782964-70782983 | None:intergenic | 45.0% | |
| AGACCCTAAGTGCAGAGAAT+TGG | + | chr8_2:70782965-70782984 | None:intergenic | 45.0% | |
| GTAAGGTAGCTAGTTAACGG+CGG | + | chr8_2:70783280-70783299 | None:intergenic | 45.0% | |
| AGCCATCTGCTATTCAGCAA+AGG | - | chr8_2:70783785-70783804 | Msa1266060:intron | 45.0% | |
| GCCATCTGCTATTCAGCAAA+GGG | - | chr8_2:70783786-70783805 | Msa1266060:intron | 45.0% | |
| CCATCTGCTATTCAGCAAAG+GGG | - | chr8_2:70783787-70783806 | Msa1266060:intron | 45.0% | |
| CATCTGCTATTCAGCAAAGG+GGG | - | chr8_2:70783788-70783807 | Msa1266060:intron | 45.0% | |
| ACATCAAGTCCCTTGCAGAA+GGG | + | chr8_2:70783820-70783839 | None:intergenic | 45.0% | |
| AACATCAAGTCCCTTGCAGA+AGG | + | chr8_2:70783821-70783840 | None:intergenic | 45.0% | |
| GTTATTCAACAGGCTCAGTC+TGG | - | chr8_2:70783838-70783857 | Msa1266060:intron | 45.0% | |
| !!! | GCAGAAAGTTGCTGTTTTCC+CGG | + | chr8_2:70783866-70783885 | None:intergenic | 45.0% |
| ! | ACGAGTTGGAGCTAAAACCA+AGG | + | chr8_2:70783935-70783954 | None:intergenic | 45.0% |
| GTTAAGGTGCATGCTTGTGT+CGG | - | chr8_2:70784009-70784028 | Msa1266060:intron | 45.0% | |
| AGTGGTGTTCATGTTGTGGT+TGG | - | chr8_2:70784069-70784088 | Msa1266060:intron | 45.0% | |
| AGCATATCAAACACACGACC+AGG | + | chr8_2:70784099-70784118 | None:intergenic | 45.0% | |
| GCTGATGAAATGCTTTCTCG+AGG | - | chr8_2:70784171-70784190 | Msa1266060:intron | 45.0% | |
| !!! | GGGCTCACCTATTTTTGGAT+TGG | - | chr8_2:70784496-70784515 | Msa1266060:intron | 45.0% |
| !!! | GATTGGGAGTGTGTTTTTGG+AGG | - | chr8_2:70784513-70784532 | Msa1266060:intron | 45.0% |
| ATTAACCTCCATGCAAGGTG+GGG | - | chr8_2:70784705-70784724 | Msa1266060:intron | 45.0% | |
| TGTTTGGGAGGCAGATGTTT+GGG | + | chr8_2:70784771-70784790 | None:intergenic | 45.0% | |
| TTGTTTGGGAGGCAGATGTT+TGG | + | chr8_2:70784772-70784791 | None:intergenic | 45.0% | |
| GTAAACCGCTTTAACCTCCT+TGG | - | chr8_2:70784931-70784950 | Msa1266060:intron | 45.0% | |
| CTGCCAGGTAAGATTCAAGT+AGG | - | chr8_2:70784990-70785009 | Msa1266060:CDS | 45.0% | |
| TAAGCTCATCACGCTTCACA+AGG | + | chr8_2:70785088-70785107 | None:intergenic | 45.0% | |
| CGTGATGAGCTTACCTTAGA+GGG | - | chr8_2:70785095-70785114 | Msa1266060:intron | 45.0% | |
| ! | ACACCAGGAGGAAAGTTGAT+TGG | - | chr8_2:70785222-70785241 | Msa1266060:intron | 45.0% |
| CAACCAATCAACTTTCCTCC+TGG | + | chr8_2:70785228-70785247 | None:intergenic | 45.0% | |
| TAGCTGAGACTGTATGGTCT+CGG | + | chr8_2:70785268-70785287 | None:intergenic | 45.0% | |
| CATACAGTCTCAGCTACTCA+CGG | - | chr8_2:70785272-70785291 | Msa1266060:intron | 45.0% | |
| AAACACGAGAAGACCCAGAA+CGG | + | chr8_2:70785340-70785359 | None:intergenic | 45.0% | |
| AATACCACGAGCCAACAGAT+CGG | + | chr8_2:70785372-70785391 | None:intergenic | 45.0% | |
| TGATGTCCAACAAGTGTCTC+TGG | - | chr8_2:70785391-70785410 | Msa1266060:intron | 45.0% | |
| ATGGAGATAGTTCTCAGGCT+GGG | + | chr8_2:70785438-70785457 | None:intergenic | 45.0% | |
| TTCCACTACGACCAATACGA+TGG | + | chr8_2:70785457-70785476 | None:intergenic | 45.0% | |
| ! | ATCGTATTGGTCGTAGTGGA+AGG | - | chr8_2:70785456-70785475 | Msa1266060:intron | 45.0% |
| ! | ATTGGTCGTAGTGGAAGGTT+TGG | - | chr8_2:70785461-70785480 | Msa1266060:intron | 45.0% |
| ! | ACTTTACACCCTCCCCTTTT+TGG | - | chr8_2:70785668-70785687 | Msa1266060:intron | 45.0% |
| AGTTGTCTGAATATCGGGGT+AGG | - | chr8_2:70785753-70785772 | Msa1266060:five_prime_UTR | 45.0% | |
| !! | ACCAACTAGCGTTGACTGAG+AGG | - | chr8_2:70781544-70781563 | Msa1266060:three_prime_UTR | 50.0% |
| !! | CCAACTAGCGTTGACTGAGA+GGG | - | chr8_2:70781545-70781564 | Msa1266060:three_prime_UTR | 50.0% |
| !! | CAACTAGCGTTGACTGAGAG+GGG | - | chr8_2:70781546-70781565 | Msa1266060:three_prime_UTR | 50.0% |
| ! | GTTTTCATCCCTCAACTCCG+CGG | - | chr8_2:70781674-70781693 | Msa1266060:three_prime_UTR | 50.0% |
| ! | CGTAGATCCGGGGAGTTTTT+GGG | - | chr8_2:70781697-70781716 | Msa1266060:three_prime_UTR | 50.0% |
| AGGGTTTCCCAAAAACTCCC+CGG | + | chr8_2:70781707-70781726 | None:intergenic | 50.0% | |
| ! | AGCATCGAATTGTGACCCCT+CGG | + | chr8_2:70782474-70782493 | None:intergenic | 50.0% |
| AGGGGTCACAATTCGATGCT+GGG | - | chr8_2:70782474-70782493 | Msa1266060:CDS | 50.0% | |
| TCTCTCAGGATTGCAGCTGA+TGG | - | chr8_2:70782629-70782648 | Msa1266060:intron | 50.0% | |
| !! | GCAGAGAATTGGGGTATTGC+AGG | + | chr8_2:70782954-70782973 | None:intergenic | 50.0% |
| CTCTGCACTTAGGGTCTGTT+TGG | - | chr8_2:70782968-70782987 | Msa1266060:intron | 50.0% | |
| TTAACGGCGGATACGCTAGT+TGG | + | chr8_2:70783267-70783286 | None:intergenic | 50.0% | |
| CCCCTTTGCTGAATAGCAGA+TGG | + | chr8_2:70783790-70783809 | None:intergenic | 50.0% | |
| GGGATAGTTCCCTTCTGCAA+GGG | - | chr8_2:70783808-70783827 | Msa1266060:intron | 50.0% | |
| CTACAATGTGACTCAGTGCC+AGG | - | chr8_2:70783909-70783928 | Msa1266060:intron | 50.0% | |
| TTGGAGCTAAAACCAAGGCC+TGG | + | chr8_2:70783930-70783949 | None:intergenic | 50.0% | |
| GCTTGCTCAGCAGATTGAGA+AGG | - | chr8_2:70783957-70783976 | Msa1266060:intron | 50.0% | |
| ! | CATGTTGTGGTTGGTACTCC+TGG | - | chr8_2:70784078-70784097 | Msa1266060:intron | 50.0% |
| ! | TTTTGACGGGAAGAGCGAAG+AGG | - | chr8_2:70784461-70784480 | Msa1266060:intron | 50.0% |
| TTTGACGGGAAGAGCGAAGA+GGG | - | chr8_2:70784462-70784481 | Msa1266060:intron | 50.0% | |
| !!! | TGGGAGTGTGTTTTTGGAGG+AGG | - | chr8_2:70784516-70784535 | Msa1266060:intron | 50.0% |
| !!! | GGGAGTGTGTTTTTGGAGGA+GGG | - | chr8_2:70784517-70784536 | Msa1266060:intron | 50.0% |
| !!! | GGAGTGTGTTTTTGGAGGAG+GGG | - | chr8_2:70784518-70784537 | Msa1266060:intron | 50.0% |
| !!! | GAGTGTGTTTTTGGAGGAGG+GGG | - | chr8_2:70784519-70784538 | Msa1266060:intron | 50.0% |
| !!! | AGTGTGTTTTTGGAGGAGGG+GGG | - | chr8_2:70784520-70784539 | Msa1266060:intron | 50.0% |
| ACCGAAACTCCCCACAAGTT+GGG | + | chr8_2:70784671-70784690 | None:intergenic | 50.0% | |
| TTAACCTCCATGCAAGGTGG+GGG | - | chr8_2:70784706-70784725 | Msa1266060:intron | 50.0% | |
| GGGGGAAAAGAGGAAGAGAA+GGG | + | chr8_2:70784751-70784770 | None:intergenic | 50.0% | |
| TGGGGGAAAAGAGGAAGAGA+AGG | + | chr8_2:70784752-70784771 | None:intergenic | 50.0% | |
| GCAGATGTTTGGGGGAAAAG+AGG | + | chr8_2:70784761-70784780 | None:intergenic | 50.0% | |
| TTTGGGAGGCAGATGTTTGG+GGG | + | chr8_2:70784769-70784788 | None:intergenic | 50.0% | |
| GTTTGGGAGGCAGATGTTTG+GGG | + | chr8_2:70784770-70784789 | None:intergenic | 50.0% | |
| GATATCTTTCAGCTGCTGCC+AGG | - | chr8_2:70784975-70784994 | Msa1266060:CDS | 50.0% | |
| CTTGTGATCTCAAGTGCCTC+AGG | + | chr8_2:70785038-70785057 | None:intergenic | 50.0% | |
| ! | CTGAGGCACTTGAGATCACA+AGG | - | chr8_2:70785036-70785055 | Msa1266060:intron | 50.0% |
| GCGTGATGAGCTTACCTTAG+AGG | - | chr8_2:70785094-70785113 | Msa1266060:intron | 50.0% | |
| TGAGAAAGAGGAGTGGAAGC+TGG | - | chr8_2:70785142-70785161 | Msa1266060:intron | 50.0% | |
| CGTGAGTAGCTGAGACTGTA+TGG | + | chr8_2:70785274-70785293 | None:intergenic | 50.0% | |
| GATAGTTCTCAGGCTGGGTA+GGG | + | chr8_2:70785433-70785452 | None:intergenic | 50.0% | |
| AGATAGTTCTCAGGCTGGGT+AGG | + | chr8_2:70785434-70785453 | None:intergenic | 50.0% | |
| GATGGAGATAGTTCTCAGGC+TGG | + | chr8_2:70785439-70785458 | None:intergenic | 50.0% | |
| ! | CTCCATCGTATTGGTCGTAG+TGG | - | chr8_2:70785452-70785471 | Msa1266060:intron | 50.0% |
| CCCTCTCAGTCAACGCTAGT+TGG | + | chr8_2:70781548-70781567 | None:intergenic | 55.0% | |
| ! | GCGTAGATCCGGGGAGTTTT+TGG | - | chr8_2:70781696-70781715 | Msa1266060:three_prime_UTR | 55.0% |
| GCATCGAATTGTGACCCCTC+GGG | + | chr8_2:70782473-70782492 | None:intergenic | 55.0% | |
| GAGGGGTCACAATTCGATGC+TGG | - | chr8_2:70782473-70782492 | Msa1266060:CDS | 55.0% | |
| GGGGATAGTTCCCTTCTGCA+AGG | - | chr8_2:70783807-70783826 | Msa1266060:intron | 55.0% | |
| ! | CAACAGGCTCAGTCTGGAAC+CGG | - | chr8_2:70783844-70783863 | Msa1266060:intron | 55.0% |
| ! | AACAGGCTCAGTCTGGAACC+GGG | - | chr8_2:70783845-70783864 | Msa1266060:intron | 55.0% |
| TGCTGAGCAAGCTCACGAGT+TGG | + | chr8_2:70783949-70783968 | None:intergenic | 55.0% | |
| GAGAAGGTTATGCGTGCGCT+TGG | - | chr8_2:70783973-70783992 | Msa1266060:intron | 55.0% | |
| CGTGCGCTTGGAGACTATCT+AGG | - | chr8_2:70783985-70784004 | Msa1266060:intron | 55.0% | |
| AAGGTGCATGCTTGTGTCGG+AGG | - | chr8_2:70784012-70784031 | Msa1266060:intron | 55.0% | |
| ! | AAGAGCGAAGAGGGCATGGA+GGG | - | chr8_2:70784471-70784490 | Msa1266060:intron | 55.0% |
| CCGAAACTCCCCACAAGTTG+GGG | + | chr8_2:70784670-70784689 | None:intergenic | 55.0% | |
| CCCCAACTTGTGGGGAGTTT+CGG | - | chr8_2:70784667-70784686 | Msa1266060:intron | 55.0% | |
| GACCGAAACTCCCCACAAGT+TGG | + | chr8_2:70784672-70784691 | None:intergenic | 55.0% | |
| CTCTGCTACAATGCCTCCTG+AGG | - | chr8_2:70785019-70785038 | Msa1266060:intron | 55.0% | |
| GTGATCTCAAGTGCCTCAGG+AGG | + | chr8_2:70785035-70785054 | None:intergenic | 55.0% | |
| CGCTTCACAAGGATCCTCAC+AGG | + | chr8_2:70785077-70785096 | None:intergenic | 55.0% | |
| CTCAGCTACTCACGGAGACA+TGG | - | chr8_2:70785280-70785299 | Msa1266060:intron | 55.0% | |
| !! | ACTACCGATCTGTTGGCTCG+TGG | - | chr8_2:70785365-70785384 | Msa1266060:intron | 55.0% |
| GATCTACGCCGCGGAGTTGA+GGG | + | chr8_2:70781685-70781704 | None:intergenic | 60.0% | |
| TCAACTCCGCGGCGTAGATC+CGG | - | chr8_2:70781685-70781704 | Msa1266060:three_prime_UTR | 60.0% | |
| TATGGCTGGACTTGCACCCG+AGG | - | chr8_2:70782454-70782473 | Msa1266060:CDS | 60.0% | |
| ATGGCTGGACTTGCACCCGA+GGG | - | chr8_2:70782455-70782474 | Msa1266060:CDS | 60.0% | |
| TGTGACTCAGTGCCAGGCCT+TGG | - | chr8_2:70783915-70783934 | Msa1266060:intron | 60.0% | |
| ! | GAAGAGCGAAGAGGGCATGG+AGG | - | chr8_2:70784470-70784489 | Msa1266060:intron | 60.0% |
| ! | AGAGCGAAGAGGGCATGGAG+GGG | - | chr8_2:70784472-70784491 | Msa1266060:intron | 60.0% |
| ! | GGGGGGGGCTCACCTATTTT+TGG | - | chr8_2:70784491-70784510 | Msa1266060:intron | 60.0% |
| AGTTCTCAGGCTGGGTAGGG+AGG | + | chr8_2:70785430-70785449 | None:intergenic | 60.0% | |
| GGATCTACGCCGCGGAGTTG+AGG | + | chr8_2:70781686-70781705 | None:intergenic | 65.0% | |
| CAACTCCGCGGCGTAGATCC+GGG | - | chr8_2:70781686-70781705 | Msa1266060:three_prime_UTR | 65.0% | |
| AACTCCGCGGCGTAGATCCG+GGG | - | chr8_2:70781687-70781706 | Msa1266060:three_prime_UTR | 65.0% | |
| AACTCCCCGGATCTACGCCG+CGG | + | chr8_2:70781694-70781713 | None:intergenic | 65.0% | |
| TGGCTGGACTTGCACCCGAG+GGG | - | chr8_2:70782456-70782475 | Msa1266060:CDS | 65.0% | |
| CGGGAAGAGCGAAGAGGGCA+TGG | - | chr8_2:70784467-70784486 | Msa1266060:intron | 65.0% | |
| ! | GAGCGAAGAGGGCATGGAGG+GGG | - | chr8_2:70784473-70784492 | Msa1266060:intron | 65.0% |
| ! | AGCGAAGAGGGCATGGAGGG+GGG | - | chr8_2:70784474-70784493 | Msa1266060:intron | 65.0% |
| ACCTCCATGCAAGGTGGGGG+TGG | - | chr8_2:70784709-70784728 | Msa1266060:intron | 65.0% | |
| CCTCCATGCAAGGTGGGGGT+GGG | - | chr8_2:70784710-70784729 | Msa1266060:intron | 65.0% | |
| ACTCCCACCCCCACCTTGCA+TGG | + | chr8_2:70784716-70784735 | None:intergenic | 65.0% | |
| ! | GCGAAGAGGGCATGGAGGGG+GGG | - | chr8_2:70784475-70784494 | Msa1266060:intron | 70.0% |
| ! | CGAAGAGGGCATGGAGGGGG+GGG | - | chr8_2:70784476-70784495 | Msa1266060:intron | 70.0% |
| CCCACCCCCACCTTGCATGG+AGG | + | chr8_2:70784713-70784732 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 70781451 | 70786019 | 70781451 | ID=Msa1266060;Name=Msa1266060 |
| chr8_2 | mRNA | 70781451 | 70786019 | 70781451 | ID=Msa1266060-mRNA-1;Parent=Msa1266060;Name=Msa1266060-mRNA-1;_AED=0.12;_eAED=0.12;_QI=326|1|1|1|0.75|0.6|5|415|413 |
| chr8_2 | exon | 70781451 | 70782501 | 70781451 | ID=Msa1266060-mRNA-1:exon:23528;Parent=Msa1266060-mRNA-1 |
| chr8_2 | exon | 70783264 | 70783694 | 70783264 | ID=Msa1266060-mRNA-1:exon:23527;Parent=Msa1266060-mRNA-1 |
| chr8_2 | exon | 70784727 | 70784833 | 70784727 | ID=Msa1266060-mRNA-1:exon:23526;Parent=Msa1266060-mRNA-1 |
| chr8_2 | exon | 70784948 | 70785017 | 70784948 | ID=Msa1266060-mRNA-1:exon:23525;Parent=Msa1266060-mRNA-1 |
| chr8_2 | exon | 70785696 | 70786019 | 70785696 | ID=Msa1266060-mRNA-1:exon:23524;Parent=Msa1266060-mRNA-1 |
| chr8_2 | five_prime_UTR | 70785696 | 70786019 | 70785696 | ID=Msa1266060-mRNA-1:five_prime_utr;Parent=Msa1266060-mRNA-1 |
| chr8_2 | five_prime_UTR | 70785016 | 70785017 | 70785016 | ID=Msa1266060-mRNA-1:five_prime_utr;Parent=Msa1266060-mRNA-1 |
| chr8_2 | CDS | 70784948 | 70785015 | 70784948 | ID=Msa1266060-mRNA-1:cds;Parent=Msa1266060-mRNA-1 |
| chr8_2 | CDS | 70784727 | 70784833 | 70784727 | ID=Msa1266060-mRNA-1:cds;Parent=Msa1266060-mRNA-1 |
| chr8_2 | CDS | 70783264 | 70783694 | 70783264 | ID=Msa1266060-mRNA-1:cds;Parent=Msa1266060-mRNA-1 |
| chr8_2 | CDS | 70781866 | 70782501 | 70781866 | ID=Msa1266060-mRNA-1:cds;Parent=Msa1266060-mRNA-1 |
| chr8_2 | three_prime_UTR | 70781451 | 70781865 | 70781451 | ID=Msa1266060-mRNA-1:three_prime_utr;Parent=Msa1266060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
