AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0429770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0429770 MtrunA17_Chr3g0133481 68.182 396 119 1 1 396 1 389 0.0 540
Msa0429770 MtrunA17_Chr3g0133511 62.716 405 133 5 1 394 1 398 7.91e-175 493
Msa0429770 MtrunA17_Chr3g0133391 63.750 400 130 5 1 396 1 389 1.51e-169 479
Msa0429770 MtrunA17_Chr7g0233731 60.859 396 143 3 2 392 12 400 1.75e-166 474
Msa0429770 MtrunA17_Chr7g0233731 70.968 62 17 1 336 396 399 460 4.52e-17 82.8
Msa0429770 MtrunA17_Chr8g0346621 63.077 390 127 6 12 396 20 397 2.87e-166 471
Msa0429770 MtrunA17_Chr4g0023671 61.347 401 137 5 1 396 1 388 1.45e-165 469
Msa0429770 MtrunA17_Chr3g0083861 61.965 397 132 5 4 394 56 439 1.07e-163 466
Msa0429770 MtrunA17_Chr7g0233701 62.500 400 138 3 2 396 4 396 3.92e-163 463
Msa0429770 MtrunA17_Chr3g0133411 58.458 402 133 5 22 396 44 438 3.23e-157 450
Msa0429770 MtrunA17_Chr3g0133431 59.453 402 141 9 1 395 20 406 5.14e-149 428
Msa0429770 MtrunA17_Chr3g0133531 69.128 298 91 1 98 394 7 304 1.78e-144 412
Msa0429770 MtrunA17_Chr3g0096411 54.412 408 144 7 5 395 9 391 1.63e-142 410
Msa0429770 MtrunA17_Chr2g0302581 54.887 399 157 6 4 394 3 386 1.40e-141 408
Msa0429770 MtrunA17_Chr2g0302611 54.887 399 157 6 4 394 3 386 1.50e-141 408
Msa0429770 MtrunA17_Chr3g0134681 56.430 381 127 6 22 394 67 416 2.23e-137 399
Msa0429770 MtrunA17_Chr3g0083001 55.779 398 129 7 4 394 14 371 1.09e-133 387
Msa0429770 MtrunA17_Chr7g0233691 67.286 269 83 2 133 396 10 278 1.07e-122 356
Msa0429770 MtrunA17_Chr8g0358841 66.541 266 84 2 134 394 2 267 7.77e-122 353
Msa0429770 MtrunA17_Chr7g0233721 67.939 262 79 2 140 396 17 278 8.60e-120 348
Msa0429770 MtrunA17_Chr3g0133371 66.797 256 81 2 143 396 35 288 2.97e-119 347
Msa0429770 MtrunA17_Chr4g0046911 62.069 261 88 3 140 395 5 259 1.33e-106 314
Msa0429770 MtrunA17_Chr7g0233751 54.693 309 115 4 5 306 7 297 2.17e-105 313
Msa0429770 MtrunA17_Chr3g0083041 63.424 257 87 5 142 394 44 297 2.79e-103 307
Msa0429770 MtrunA17_Chr3g0083871 56.705 261 88 3 139 394 9 249 3.21e-93 280
Msa0429770 MtrunA17_Chr8g0346661 66.667 213 69 1 22 234 15 225 1.11e-92 278
Msa0429770 MtrunA17_Chr3g0141031 61.860 215 74 2 187 396 9 220 1.30e-82 251
Msa0429770 MtrunA17_Chr3g0143151 39.899 396 208 12 20 396 26 410 1.86e-75 240
Msa0429770 MtrunA17_Chr2g0302701 57.488 207 77 3 196 394 9 212 2.42e-73 228
Msa0429770 MtrunA17_Chr3g0133091 62.644 174 59 2 180 347 1 174 1.24e-69 218
Msa0429770 MtrunA17_Chr3g0132731 68.243 148 47 0 137 284 11 158 2.36e-67 210
Msa0429770 MtrunA17_Chr3g0133501 67.089 158 45 2 245 395 1 158 4.03e-63 199
Msa0429770 MtrunA17_Chr3g0133401 57.065 184 43 2 213 396 1 148 3.21e-60 192
Msa0429770 MtrunA17_Chr3g0133471 62.275 167 52 4 213 370 1 165 1.02e-58 188
Msa0429770 MtrunA17_Chr8g0346651 59.615 156 54 3 245 396 1 151 4.95e-54 176
Msa0429770 MtrunA17_Chr3g0134651 56.129 155 64 1 204 354 3 157 5.05e-53 174
Msa0429770 MtrunA17_Chr4g0046951 66.667 114 38 0 140 253 5 118 3.39e-50 165
Msa0429770 MtrunA17_Chr7g0233711 55.319 141 56 1 2 142 4 137 3.08e-45 153
Msa0429770 MtrunA17_Chr7g0233681 52.482 141 66 1 1 140 1 141 5.90e-43 147
Msa0429770 MtrunA17_Chr3g0133351 58.696 138 47 3 1 138 1 128 4.34e-42 145
Msa0429770 MtrunA17_Chr3g0134661 65.385 104 36 0 23 126 1 104 4.61e-41 140
Msa0429770 MtrunA17_Chr8g0358851 56.522 138 53 1 1 138 1 131 5.44e-41 141
Msa0429770 MtrunA17_Chr3g0133521 64.583 96 34 0 140 235 2 97 1.13e-38 134
Msa0429770 MtrunA17_Chr4g0046941 58.120 117 47 1 22 138 16 130 2.09e-36 129
Msa0429770 MtrunA17_Chr4g0046961 57.851 121 42 2 274 390 2 117 1.55e-31 116
Msa0429770 MtrunA17_Chr3g0141021 53.521 71 33 0 123 193 1 71 3.23e-22 90.1
Msa0429770 MtrunA17_Chr3g0132691 67.213 61 20 0 213 273 1 61 8.73e-22 88.2
Msa0429770 MtrunA17_Chr3g0133491 89.130 46 5 0 351 396 1 46 1.04e-21 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0429770 AT1G47710.1 48.500 400 190 7 1 394 1 390 1.20e-123 363
Msa0429770 AT1G47710.2 48.500 400 190 7 1 394 28 417 5.81e-123 362
Msa0429770 AT3G45220.1 45.924 368 179 4 39 393 30 390 6.24e-109 325
Msa0429770 AT2G25240.1 47.658 363 172 7 39 393 30 382 8.77e-108 322
Msa0429770 AT2G26390.1 46.594 367 173 8 39 393 31 386 1.87e-106 319
Msa0429770 AT1G64030.1 42.386 394 198 6 4 393 3 371 1.81e-98 298
Msa0429770 AT1G62170.1 42.935 368 180 5 36 395 88 433 1.89e-97 297
Msa0429770 AT2G14540.1 44.875 361 178 4 36 393 55 397 2.43e-95 291
Msa0429770 AT1G62170.2 39.651 401 179 6 36 395 88 466 1.82e-91 283
Msa0429770 AT2G35580.1 42.577 357 181 7 43 393 33 371 2.43e-91 280
Msa0429770 AT1G64010.2 47.907 215 91 3 180 393 1 195 1.98e-63 202
Msa0429770 AT1G64010.1 47.000 200 85 3 195 393 2 181 1.95e-55 181
Msa0429770 AT1G62160.1 41.000 200 91 5 202 395 42 220 1.70e-34 127
Msa0429770 AT1G63280.1 53.390 118 51 2 136 251 5 120 2.62e-34 124
Msa0429770 AT1G51330.1 49.107 112 54 2 137 245 29 140 2.09e-27 107
Msa0429770 AT1G64020.1 35.398 113 70 3 18 129 10 120 1.69e-12 64.3

Find 99 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGATGATGTTAAGATTTA+TGG 0.057794 3_2:-81237740 Msa0429770:three_prime_UTR
CAACCCAATCAGTGAATTTA+TGG 0.159817 3_2:-81238665 Msa0429770:CDS
TATGAGGAAGCTTGTCTTCT+AGG 0.205127 3_2:+81238286 None:intergenic
CTTGTCTTTATATTCTTCTT+TGG 0.244807 3_2:+81239289 None:intergenic
TGTCTTCTGCCAACGCTGTT+TGG 0.258315 3_2:-81239079 Msa0429770:CDS
GTCTTCTGCCAACGCTGTTT+GGG 0.287560 3_2:-81239078 Msa0429770:CDS
CCTCTTCATGCTAGTCATAA+AGG 0.293948 3_2:+81238461 None:intergenic
CAATGAATTAATTCTTCTAT+TGG 0.297591 3_2:+81237892 None:intergenic
AACTGTTGCTACTCATTATA+TGG 0.315904 3_2:-81239018 Msa0429770:CDS
GATGCAAAAGATGGGTTGTT+AGG 0.331478 3_2:-81238342 Msa0429770:CDS
CGGAAGCGACGTGAGAAGAT+AGG 0.331599 3_2:+81239141 None:intergenic
GCTGCCGCATTCACTGGAAT+TGG 0.345550 3_2:-81238066 Msa0429770:CDS
TCATCTTCACCTTGCTTGTA+AGG 0.348281 3_2:+81238396 None:intergenic
AATCAGCTTCTGTCCTTTCT+CGG 0.370054 3_2:-81239191 Msa0429770:CDS
CGAGGAGACTGAGCGCAGTT+TGG 0.373483 3_2:+81239240 None:intergenic
CAATAGAAGAATTAATTCAT+TGG 0.380606 3_2:-81237891 Msa0429770:three_prime_UTR
TCTGATGTGTTGAAGGAGTT+AGG 0.381460 3_2:-81238201 Msa0429770:CDS
AGCCCATAAATTCACTGATT+GGG 0.386856 3_2:+81238662 None:intergenic
ATTCTTCTGGTTTGAATGGT+TGG 0.391216 3_2:+81239401 None:intergenic
AATACTGTAGAAACACTAAT+TGG 0.391329 3_2:+81238129 None:intergenic
CAGCCCATAAATTCACTGAT+TGG 0.401585 3_2:+81238661 None:intergenic
GGAGCAATCGTTTGATGCTT+CGG 0.404813 3_2:-81238535 Msa0429770:CDS
TCTGGTACAATACTCTTTGT+TGG 0.408824 3_2:-81237952 Msa0429770:CDS
CATGGATCATATCTAATTGA+TGG 0.414034 3_2:+81237863 None:intergenic
TGAAATTTCTGATGTGTTGA+AGG 0.418942 3_2:-81238208 Msa0429770:CDS
AACCATTCAAACCAGAAGAA+TGG 0.422288 3_2:-81239399 Msa0429770:exon
ATTCTTCTTTGGAGAACAAA+TGG 0.423124 3_2:+81239300 None:intergenic
ATCCATTCTTCTGGTTTGAA+TGG 0.424273 3_2:+81239397 None:intergenic
CTCTTCATGCTAGTCATAAA+GGG 0.432869 3_2:+81238462 None:intergenic
TTTAGGGGTCTGAAATTAGT+TGG 0.434906 3_2:-81237681 Msa0429770:three_prime_UTR
TTTCTTCCAGATGCAAAAGA+TGG 0.444703 3_2:-81238351 Msa0429770:CDS
AGTAGCAACAGTTTCTTTGA+AGG 0.447416 3_2:+81239028 None:intergenic
TGGTGAAGAAATGGTTGGTA+AGG 0.449170 3_2:+81239351 None:intergenic
CTGCCGCATTCACTGGAATT+GGG 0.449429 3_2:-81238065 Msa0429770:CDS
AGTGAATTTATGGGCTGAAA+AGG 0.450449 3_2:-81238655 Msa0429770:CDS
TTCACTGGAATTGGGATGGC+TGG 0.452119 3_2:-81238057 Msa0429770:CDS
TTGATTAGAGAAGATTTGTC+TGG 0.453212 3_2:-81237970 Msa0429770:CDS
ACGAACGTAATCCATTCTTC+TGG 0.456785 3_2:+81239388 None:intergenic
AACCCAATCAGTGAATTTAT+GGG 0.457167 3_2:-81238664 Msa0429770:CDS
GGAAGCGACGTGAGAAGATA+GGG 0.462599 3_2:+81239142 None:intergenic
CAGCGAGGGGATTATGCACT+TGG 0.465525 3_2:+81237929 None:intergenic
TGATCCATGTGCGAGTCAAA+TGG 0.466888 3_2:-81237849 Msa0429770:three_prime_UTR
CTCCTCGCTGTTGGTTCTGA+GGG 0.470422 3_2:-81239224 Msa0429770:CDS
TCAAAAGAAATATTGAATCT+TGG 0.470594 3_2:+81238234 None:intergenic
TGAAGGAAGGGTAAACAGAA+AGG 0.471470 3_2:+81239045 None:intergenic
TGGGCTGAAAAGGAGACAAA+AGG 0.472940 3_2:-81238645 Msa0429770:CDS
ACTAAAGCTGCCGCATTCAC+TGG 0.473621 3_2:-81238072 Msa0429770:CDS
GACAAGCATGGACCGCCGGC+AGG 0.474957 3_2:+81239098 None:intergenic
GTCAAACCTCCAATAGAGAA+AGG 0.475976 3_2:+81238168 None:intergenic
TCTCCTCGCTGTTGGTTCTG+AGG 0.490976 3_2:-81239225 Msa0429770:CDS
GAAGGAAGGGTAAACAGAAA+GGG 0.492254 3_2:+81239046 None:intergenic
CAACAGTTTCTTTGAAGGAA+GGG 0.497373 3_2:+81239033 None:intergenic
CTCAAAGACGCTGCTCCTGC+CGG 0.500555 3_2:-81239113 Msa0429770:CDS
TTCTTTGGAGAACAAATGGT+TGG 0.505452 3_2:+81239304 None:intergenic
GCGCTCAGTCTCCTCGCTGT+TGG 0.506186 3_2:-81239233 Msa0429770:CDS
GGTATCGGAGTTGAAGTGTA+TGG 0.511402 3_2:+81238027 None:intergenic
GCAACAGTTTCTTTGAAGGA+AGG 0.513025 3_2:+81239032 None:intergenic
TGGTCAGCTACAAAGTCTAT+TGG 0.513464 3_2:+81238006 None:intergenic
ACAAATGCATTATACTTCAA+AGG 0.517977 3_2:-81238564 Msa0429770:CDS
GTCATTGAAGTAAATGAAGA+AGG 0.521214 3_2:-81238096 Msa0429770:CDS
TTCTTCCAGATGCAAAAGAT+GGG 0.522138 3_2:-81238350 Msa0429770:CDS
CGCATTCACTGGAATTGGGA+TGG 0.526890 3_2:-81238061 Msa0429770:CDS
GGGCTGAAAAGGAGACAAAA+GGG 0.540477 3_2:-81238644 Msa0429770:CDS
AGAAGACAAGCATGGACCGC+CGG 0.545801 3_2:+81239094 None:intergenic
ATATTATAAAAGAACACAAA+AGG 0.546820 3_2:+81237648 None:intergenic
ATGGATCATATCTAATTGAT+GGG 0.548360 3_2:+81237864 None:intergenic
AGCGCAGTTTGGAGCGACAA+TGG 0.549289 3_2:+81239251 None:intergenic
GCTACAAAGTCTATTGGTAT+CGG 0.556429 3_2:+81238012 None:intergenic
CATTATACTTCAAAGGAGCA+TGG 0.562007 3_2:-81238557 Msa0429770:CDS
CTTAGTCTTCCTTACAAGCA+AGG 0.563134 3_2:-81238405 Msa0429770:CDS
GTTAGGTTTGATTGAGAAAG+CGG 0.567281 3_2:-81238325 Msa0429770:CDS
GGAGAACAAATGGTTGGCGA+TGG 0.571262 3_2:+81239310 None:intergenic
CCTTTATGACTAGCATGAAG+AGG 0.571406 3_2:-81238461 Msa0429770:CDS
GATGGACTTTGATCCGAGAA+AGG 0.581696 3_2:+81239178 None:intergenic
TAATCCATTTGACTCGCACA+TGG 0.584152 3_2:+81237845 None:intergenic
CAAGCTTCCTCATACAAAAG+TGG 0.592026 3_2:-81238277 Msa0429770:CDS
CAAGTGCATAATCCCCTCGC+TGG 0.595687 3_2:-81237928 Msa0429770:CDS
TCTCAATGGCACCTCAGTCA+AGG 0.599345 3_2:-81238487 Msa0429770:CDS
ATTATACTTCAAAGGAGCAT+GGG 0.601138 3_2:-81238556 Msa0429770:CDS
TAGGGAGTTGAGATGGCCGA+TGG 0.601672 3_2:+81239160 None:intergenic
CTTGCTTGTAAGGAAGACTA+AGG 0.608424 3_2:+81238406 None:intergenic
GAGAAGATAGGGAGTTGAGA+TGG 0.618975 3_2:+81239153 None:intergenic
AAAGACGCTGCTCCTGCCGG+CGG 0.624527 3_2:-81239110 Msa0429770:CDS
GAAATCAAGTGATTTGAGAG+TGG 0.625530 3_2:+81238995 None:intergenic
CCTCATACAAAAGTGGTGGT+AGG 0.629641 3_2:-81238270 Msa0429770:CDS
CATCCCAATTCCAGTGAATG+CGG 0.632365 3_2:+81238062 None:intergenic
TGTGTTGAAGGAGTTAGGAG+TGG 0.642269 3_2:-81238196 Msa0429770:CDS
TAGTTGAGATCATCCAGCGA+GGG 0.653122 3_2:+81237915 None:intergenic
TTTCTCGGATCAAAGTCCAT+CGG 0.660434 3_2:-81239176 Msa0429770:CDS
GTTAAGCTATTAATCGACCC+AGG 0.661094 3_2:+81238600 None:intergenic
AGCAGCGTCTTTGAGAACAG+CGG 0.665031 3_2:+81239121 None:intergenic
TGACTGAGGTGCCATTGAGA+AGG 0.673594 3_2:+81238490 None:intergenic
GCTTCCTCATACAAAAGTGG+TGG 0.680566 3_2:-81238274 Msa0429770:CDS
AGTTGAGATCATCCAGCGAG+GGG 0.687329 3_2:+81237916 None:intergenic
GCGTTGGCAGAAGACAAGCA+TGG 0.713189 3_2:+81239086 None:intergenic
CATAAAGGGAACCTTGACTG+AGG 0.721556 3_2:+81238476 None:intergenic
GACCCTCAGAACCAACAGCG+AGG 0.731995 3_2:+81239222 None:intergenic
AAGCTATTAATCGACCCAGG+TGG 0.746620 3_2:+81238603 None:intergenic
GTAGTTGAGATCATCCAGCG+AGG 0.762097 3_2:+81237914 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGTTTAGAATAGAAAATA+AGG + chr3_2:81238161-81238180 None:intergenic 15.0%
!!! TATATTTGATATTGTTTTGA+AGG - chr3_2:81238348-81238367 Msa0429770:CDS 15.0%
!!! TTGAAATTCGTTTTTTTTTT+AGG - chr3_2:81239347-81239366 Msa0429770:CDS 15.0%
!!! TGAAATTCGTTTTTTTTTTA+GGG - chr3_2:81239348-81239367 Msa0429770:CDS 15.0%
!! ATATTATAAAAGAACACAAA+AGG + chr3_2:81239400-81239419 None:intergenic 15.0%
!!! ATTGTTTAGAATAGAAAATA+AGG + chr3_2:81238161-81238180 None:intergenic 15.0%
!!! TATATTTGATATTGTTTTGA+AGG - chr3_2:81238348-81238367 Msa0429770:CDS 15.0%
!!! TTGAAATTCGTTTTTTTTTT+AGG - chr3_2:81239347-81239366 Msa0429770:CDS 15.0%
!!! TGAAATTCGTTTTTTTTTTA+GGG - chr3_2:81239348-81239367 Msa0429770:CDS 15.0%
!! ATATTATAAAAGAACACAAA+AGG + chr3_2:81239400-81239419 None:intergenic 15.0%
!! TTAATCTACTAATCTAACAA+GGG + chr3_2:81238132-81238151 None:intergenic 20.0%
!! TTTAATCTACTAATCTAACA+AGG + chr3_2:81238133-81238152 None:intergenic 20.0%
!!! TATTTTGTTGTTAAATTGCT+TGG + chr3_2:81238239-81238258 None:intergenic 20.0%
!! TCAAAAGAAATATTGAATCT+TGG + chr3_2:81238814-81238833 None:intergenic 20.0%
!! CAATGAATTAATTCTTCTAT+TGG + chr3_2:81239156-81239175 None:intergenic 20.0%
!! CAATAGAAGAATTAATTCAT+TGG - chr3_2:81239154-81239173 Msa0429770:CDS 20.0%
!! TTAGATGATGTTAAGATTTA+TGG - chr3_2:81239305-81239324 Msa0429770:CDS 20.0%
!!! GAAATTCGTTTTTTTTTTAG+GGG - chr3_2:81239349-81239368 Msa0429770:CDS 20.0%
!! TTAATCTACTAATCTAACAA+GGG + chr3_2:81238132-81238151 None:intergenic 20.0%
!! TTTAATCTACTAATCTAACA+AGG + chr3_2:81238133-81238152 None:intergenic 20.0%
!!! TATTTTGTTGTTAAATTGCT+TGG + chr3_2:81238239-81238258 None:intergenic 20.0%
!! TCAAAAGAAATATTGAATCT+TGG + chr3_2:81238814-81238833 None:intergenic 20.0%
!! CAATGAATTAATTCTTCTAT+TGG + chr3_2:81239156-81239175 None:intergenic 20.0%
!! CAATAGAAGAATTAATTCAT+TGG - chr3_2:81239154-81239173 Msa0429770:CDS 20.0%
!! TTAGATGATGTTAAGATTTA+TGG - chr3_2:81239305-81239324 Msa0429770:CDS 20.0%
!!! GAAATTCGTTTTTTTTTTAG+GGG - chr3_2:81239349-81239368 Msa0429770:CDS 20.0%
!!! TTTCTTTTTTGGTGAAGAAA+TGG + chr3_2:81237706-81237725 None:intergenic 25.0%
!! GGTCATAGATTTTTCTTTTT+TGG + chr3_2:81237717-81237736 None:intergenic 25.0%
! CTTGTCTTTATATTCTTCTT+TGG + chr3_2:81237759-81237778 None:intergenic 25.0%
! ACAAATGCATTATACTTCAA+AGG - chr3_2:81238481-81238500 Msa0429770:CDS 25.0%
! AATACTGTAGAAACACTAAT+TGG + chr3_2:81238919-81238938 None:intergenic 25.0%
! CTCTAATCAAAAACAAGAAA+GGG + chr3_2:81239065-81239084 None:intergenic 25.0%
! TCTCTAATCAAAAACAAGAA+AGG + chr3_2:81239066-81239085 None:intergenic 25.0%
! ATGGATCATATCTAATTGAT+GGG + chr3_2:81239184-81239203 None:intergenic 25.0%
!!! TTTCTTTTTTGGTGAAGAAA+TGG + chr3_2:81237706-81237725 None:intergenic 25.0%
!! GGTCATAGATTTTTCTTTTT+TGG + chr3_2:81237717-81237736 None:intergenic 25.0%
! CTTGTCTTTATATTCTTCTT+TGG + chr3_2:81237759-81237778 None:intergenic 25.0%
! ACAAATGCATTATACTTCAA+AGG - chr3_2:81238481-81238500 Msa0429770:CDS 25.0%
! AATACTGTAGAAACACTAAT+TGG + chr3_2:81238919-81238938 None:intergenic 25.0%
! CTCTAATCAAAAACAAGAAA+GGG + chr3_2:81239065-81239084 None:intergenic 25.0%
! TCTCTAATCAAAAACAAGAA+AGG + chr3_2:81239066-81239085 None:intergenic 25.0%
! ATGGATCATATCTAATTGAT+GGG + chr3_2:81239184-81239203 None:intergenic 25.0%
!!! TTTTTTGGTGAAGAAATGGT+TGG + chr3_2:81237702-81237721 None:intergenic 30.0%
! ATTCTTCTTTGGAGAACAAA+TGG + chr3_2:81237748-81237767 None:intergenic 30.0%
AACTGTTGCTACTCATTATA+TGG - chr3_2:81238027-81238046 Msa0429770:CDS 30.0%
AACCCAATCAGTGAATTTAT+GGG - chr3_2:81238381-81238400 Msa0429770:CDS 30.0%
! ATTATACTTCAAAGGAGCAT+GGG - chr3_2:81238489-81238508 Msa0429770:CDS 30.0%
TGAAATTTCTGATGTGTTGA+AGG - chr3_2:81238837-81238856 Msa0429770:intron 30.0%
GTCATTGAAGTAAATGAAGA+AGG - chr3_2:81238949-81238968 Msa0429770:intron 30.0%
TAATCAAAAACAAGAAAGGG+TGG + chr3_2:81239062-81239081 None:intergenic 30.0%
TTGATTAGAGAAGATTTGTC+TGG - chr3_2:81239075-81239094 Msa0429770:CDS 30.0%
CATGGATCATATCTAATTGA+TGG + chr3_2:81239185-81239204 None:intergenic 30.0%
!!! TTTTTTGGTGAAGAAATGGT+TGG + chr3_2:81237702-81237721 None:intergenic 30.0%
! ATTCTTCTTTGGAGAACAAA+TGG + chr3_2:81237748-81237767 None:intergenic 30.0%
AACTGTTGCTACTCATTATA+TGG - chr3_2:81238027-81238046 Msa0429770:CDS 30.0%
AACCCAATCAGTGAATTTAT+GGG - chr3_2:81238381-81238400 Msa0429770:CDS 30.0%
! ATTATACTTCAAAGGAGCAT+GGG - chr3_2:81238489-81238508 Msa0429770:CDS 30.0%
TGAAATTTCTGATGTGTTGA+AGG - chr3_2:81238837-81238856 Msa0429770:intron 30.0%
GTCATTGAAGTAAATGAAGA+AGG - chr3_2:81238949-81238968 Msa0429770:intron 30.0%
TAATCAAAAACAAGAAAGGG+TGG + chr3_2:81239062-81239081 None:intergenic 30.0%
TTGATTAGAGAAGATTTGTC+TGG - chr3_2:81239075-81239094 Msa0429770:CDS 30.0%
CATGGATCATATCTAATTGA+TGG + chr3_2:81239185-81239204 None:intergenic 30.0%
!! ATTCTTCTGGTTTGAATGGT+TGG + chr3_2:81237647-81237666 None:intergenic 35.0%
AACCATTCAAACCAGAAGAA+TGG - chr3_2:81237646-81237665 Msa0429770:three_prime_UTR 35.0%
!! ATCCATTCTTCTGGTTTGAA+TGG + chr3_2:81237651-81237670 None:intergenic 35.0%
! TTCTTTGGAGAACAAATGGT+TGG + chr3_2:81237744-81237763 None:intergenic 35.0%
! CAACAGTTTCTTTGAAGGAA+GGG + chr3_2:81238015-81238034 None:intergenic 35.0%
AGTAGCAACAGTTTCTTTGA+AGG + chr3_2:81238020-81238039 None:intergenic 35.0%
GAAATCAAGTGATTTGAGAG+TGG + chr3_2:81238053-81238072 None:intergenic 35.0%
CAACCCAATCAGTGAATTTA+TGG - chr3_2:81238380-81238399 Msa0429770:CDS 35.0%
! AGCCCATAAATTCACTGATT+GGG + chr3_2:81238386-81238405 None:intergenic 35.0%
! AGTGAATTTATGGGCTGAAA+AGG - chr3_2:81238390-81238409 Msa0429770:CDS 35.0%
! ATTCGTAATTTTCTTCCACC+TGG - chr3_2:81238427-81238446 Msa0429770:CDS 35.0%
! TTCGTAATTTTCTTCCACCT+GGG - chr3_2:81238428-81238447 Msa0429770:CDS 35.0%
CATTATACTTCAAAGGAGCA+TGG - chr3_2:81238488-81238507 Msa0429770:CDS 35.0%
! TACGATTTTCACCTTCTCAA+TGG - chr3_2:81238544-81238563 Msa0429770:CDS 35.0%
CTCTTCATGCTAGTCATAAA+GGG + chr3_2:81238586-81238605 None:intergenic 35.0%
! CAGTTTATCAGTGCTTTTGA+TGG - chr3_2:81238607-81238626 Msa0429770:CDS 35.0%
TTTCTTCCAGATGCAAAAGA+TGG - chr3_2:81238694-81238713 Msa0429770:intron 35.0%
TTCTTCCAGATGCAAAAGAT+GGG - chr3_2:81238695-81238714 Msa0429770:intron 35.0%
GTTAGGTTTGATTGAGAAAG+CGG - chr3_2:81238720-81238739 Msa0429770:intron 35.0%
!! GTGGTTTTACCTTTCTCTAT+TGG - chr3_2:81238868-81238887 Msa0429770:intron 35.0%
! GTTTTACCTTTCTCTATTGG+AGG - chr3_2:81238871-81238890 Msa0429770:intron 35.0%
TGGAGGTTTGACAAAAATAG+TGG - chr3_2:81238888-81238907 Msa0429770:intron 35.0%
GCTACAAAGTCTATTGGTAT+CGG + chr3_2:81239036-81239055 None:intergenic 35.0%
TCTGGTACAATACTCTTTGT+TGG - chr3_2:81239093-81239112 Msa0429770:CDS 35.0%
! TTTAGGGGTCTGAAATTAGT+TGG - chr3_2:81239364-81239383 Msa0429770:CDS 35.0%
!! ATTCTTCTGGTTTGAATGGT+TGG + chr3_2:81237647-81237666 None:intergenic 35.0%
AACCATTCAAACCAGAAGAA+TGG - chr3_2:81237646-81237665 Msa0429770:three_prime_UTR 35.0%
!! ATCCATTCTTCTGGTTTGAA+TGG + chr3_2:81237651-81237670 None:intergenic 35.0%
! TTCTTTGGAGAACAAATGGT+TGG + chr3_2:81237744-81237763 None:intergenic 35.0%
! CAACAGTTTCTTTGAAGGAA+GGG + chr3_2:81238015-81238034 None:intergenic 35.0%
AGTAGCAACAGTTTCTTTGA+AGG + chr3_2:81238020-81238039 None:intergenic 35.0%
GAAATCAAGTGATTTGAGAG+TGG + chr3_2:81238053-81238072 None:intergenic 35.0%
CAACCCAATCAGTGAATTTA+TGG - chr3_2:81238380-81238399 Msa0429770:CDS 35.0%
! AGCCCATAAATTCACTGATT+GGG + chr3_2:81238386-81238405 None:intergenic 35.0%
! AGTGAATTTATGGGCTGAAA+AGG - chr3_2:81238390-81238409 Msa0429770:CDS 35.0%
! ATTCGTAATTTTCTTCCACC+TGG - chr3_2:81238427-81238446 Msa0429770:CDS 35.0%
! TTCGTAATTTTCTTCCACCT+GGG - chr3_2:81238428-81238447 Msa0429770:CDS 35.0%
CATTATACTTCAAAGGAGCA+TGG - chr3_2:81238488-81238507 Msa0429770:CDS 35.0%
! TACGATTTTCACCTTCTCAA+TGG - chr3_2:81238544-81238563 Msa0429770:CDS 35.0%
CTCTTCATGCTAGTCATAAA+GGG + chr3_2:81238586-81238605 None:intergenic 35.0%
! CAGTTTATCAGTGCTTTTGA+TGG - chr3_2:81238607-81238626 Msa0429770:CDS 35.0%
TTTCTTCCAGATGCAAAAGA+TGG - chr3_2:81238694-81238713 Msa0429770:intron 35.0%
TTCTTCCAGATGCAAAAGAT+GGG - chr3_2:81238695-81238714 Msa0429770:intron 35.0%
GTTAGGTTTGATTGAGAAAG+CGG - chr3_2:81238720-81238739 Msa0429770:intron 35.0%
!! GTGGTTTTACCTTTCTCTAT+TGG - chr3_2:81238868-81238887 Msa0429770:intron 35.0%
! GTTTTACCTTTCTCTATTGG+AGG - chr3_2:81238871-81238890 Msa0429770:intron 35.0%
TGGAGGTTTGACAAAAATAG+TGG - chr3_2:81238888-81238907 Msa0429770:intron 35.0%
GCTACAAAGTCTATTGGTAT+CGG + chr3_2:81239036-81239055 None:intergenic 35.0%
TCTGGTACAATACTCTTTGT+TGG - chr3_2:81239093-81239112 Msa0429770:CDS 35.0%
! TTTAGGGGTCTGAAATTAGT+TGG - chr3_2:81239364-81239383 Msa0429770:CDS 35.0%
ACGAACGTAATCCATTCTTC+TGG + chr3_2:81237660-81237679 None:intergenic 40.0%
! TGGTGAAGAAATGGTTGGTA+AGG + chr3_2:81237697-81237716 None:intergenic 40.0%
!! GACAGAAGCTGATTTTGTGT+GGG + chr3_2:81237848-81237867 None:intergenic 40.0%
AATCAGCTTCTGTCCTTTCT+CGG - chr3_2:81237854-81237873 Msa0429770:three_prime_UTR 40.0%
TTTCTCGGATCAAAGTCCAT+CGG - chr3_2:81237869-81237888 Msa0429770:three_prime_UTR 40.0%
!! TTTTTCAACCCAAACAGCGT+TGG + chr3_2:81237978-81237997 None:intergenic 40.0%
GAAGGAAGGGTAAACAGAAA+GGG + chr3_2:81238002-81238021 None:intergenic 40.0%
TGAAGGAAGGGTAAACAGAA+AGG + chr3_2:81238003-81238022 None:intergenic 40.0%
! GCAACAGTTTCTTTGAAGGA+AGG + chr3_2:81238016-81238035 None:intergenic 40.0%
CAGCCCATAAATTCACTGAT+TGG + chr3_2:81238387-81238406 None:intergenic 40.0%
GTTAAGCTATTAATCGACCC+AGG + chr3_2:81238448-81238467 None:intergenic 40.0%
CCTCTTCATGCTAGTCATAA+AGG + chr3_2:81238587-81238606 None:intergenic 40.0%
CCTTTATGACTAGCATGAAG+AGG - chr3_2:81238584-81238603 Msa0429770:CDS 40.0%
!! CAGTGCTTTTGATGGCTTTA+AGG - chr3_2:81238615-81238634 Msa0429770:CDS 40.0%
CTTGCTTGTAAGGAAGACTA+AGG + chr3_2:81238642-81238661 None:intergenic 40.0%
! CTTAGTCTTCCTTACAAGCA+AGG - chr3_2:81238640-81238659 Msa0429770:CDS 40.0%
TCATCTTCACCTTGCTTGTA+AGG + chr3_2:81238652-81238671 None:intergenic 40.0%
! AACAACCCATCTTTTGCATC+TGG + chr3_2:81238703-81238722 None:intergenic 40.0%
!! GATGCAAAAGATGGGTTGTT+AGG - chr3_2:81238703-81238722 Msa0429770:intron 40.0%
TATGAGGAAGCTTGTCTTCT+AGG + chr3_2:81238762-81238781 None:intergenic 40.0%
CAAGCTTCCTCATACAAAAG+TGG - chr3_2:81238768-81238787 Msa0429770:intron 40.0%
TCTGATGTGTTGAAGGAGTT+AGG - chr3_2:81238844-81238863 Msa0429770:intron 40.0%
GTCAAACCTCCAATAGAGAA+AGG + chr3_2:81238880-81238899 None:intergenic 40.0%
TGGTCAGCTACAAAGTCTAT+TGG + chr3_2:81239042-81239061 None:intergenic 40.0%
! TAATCCATTTGACTCGCACA+TGG + chr3_2:81239203-81239222 None:intergenic 40.0%
ACGAACGTAATCCATTCTTC+TGG + chr3_2:81237660-81237679 None:intergenic 40.0%
! TGGTGAAGAAATGGTTGGTA+AGG + chr3_2:81237697-81237716 None:intergenic 40.0%
!! GACAGAAGCTGATTTTGTGT+GGG + chr3_2:81237848-81237867 None:intergenic 40.0%
AATCAGCTTCTGTCCTTTCT+CGG - chr3_2:81237854-81237873 Msa0429770:three_prime_UTR 40.0%
TTTCTCGGATCAAAGTCCAT+CGG - chr3_2:81237869-81237888 Msa0429770:three_prime_UTR 40.0%
!! TTTTTCAACCCAAACAGCGT+TGG + chr3_2:81237978-81237997 None:intergenic 40.0%
GAAGGAAGGGTAAACAGAAA+GGG + chr3_2:81238002-81238021 None:intergenic 40.0%
TGAAGGAAGGGTAAACAGAA+AGG + chr3_2:81238003-81238022 None:intergenic 40.0%
! GCAACAGTTTCTTTGAAGGA+AGG + chr3_2:81238016-81238035 None:intergenic 40.0%
CAGCCCATAAATTCACTGAT+TGG + chr3_2:81238387-81238406 None:intergenic 40.0%
GTTAAGCTATTAATCGACCC+AGG + chr3_2:81238448-81238467 None:intergenic 40.0%
CCTCTTCATGCTAGTCATAA+AGG + chr3_2:81238587-81238606 None:intergenic 40.0%
CCTTTATGACTAGCATGAAG+AGG - chr3_2:81238584-81238603 Msa0429770:CDS 40.0%
!! CAGTGCTTTTGATGGCTTTA+AGG - chr3_2:81238615-81238634 Msa0429770:CDS 40.0%
CTTGCTTGTAAGGAAGACTA+AGG + chr3_2:81238642-81238661 None:intergenic 40.0%
! CTTAGTCTTCCTTACAAGCA+AGG - chr3_2:81238640-81238659 Msa0429770:CDS 40.0%
TCATCTTCACCTTGCTTGTA+AGG + chr3_2:81238652-81238671 None:intergenic 40.0%
! AACAACCCATCTTTTGCATC+TGG + chr3_2:81238703-81238722 None:intergenic 40.0%
!! GATGCAAAAGATGGGTTGTT+AGG - chr3_2:81238703-81238722 Msa0429770:intron 40.0%
TATGAGGAAGCTTGTCTTCT+AGG + chr3_2:81238762-81238781 None:intergenic 40.0%
CAAGCTTCCTCATACAAAAG+TGG - chr3_2:81238768-81238787 Msa0429770:intron 40.0%
TCTGATGTGTTGAAGGAGTT+AGG - chr3_2:81238844-81238863 Msa0429770:intron 40.0%
GTCAAACCTCCAATAGAGAA+AGG + chr3_2:81238880-81238899 None:intergenic 40.0%
TGGTCAGCTACAAAGTCTAT+TGG + chr3_2:81239042-81239061 None:intergenic 40.0%
! TAATCCATTTGACTCGCACA+TGG + chr3_2:81239203-81239222 None:intergenic 40.0%
!! GGACAGAAGCTGATTTTGTG+TGG + chr3_2:81237849-81237868 None:intergenic 45.0%
! GATGGACTTTGATCCGAGAA+AGG + chr3_2:81237870-81237889 None:intergenic 45.0%
GAGAAGATAGGGAGTTGAGA+TGG + chr3_2:81237895-81237914 None:intergenic 45.0%
ACTACCATACAACAGTTGCG+AGG + chr3_2:81238189-81238208 None:intergenic 45.0%
TGGGCTGAAAAGGAGACAAA+AGG - chr3_2:81238400-81238419 Msa0429770:CDS 45.0%
GGGCTGAAAAGGAGACAAAA+GGG - chr3_2:81238401-81238420 Msa0429770:CDS 45.0%
AAGCTATTAATCGACCCAGG+TGG + chr3_2:81238445-81238464 None:intergenic 45.0%
GGAGCAATCGTTTGATGCTT+CGG - chr3_2:81238510-81238529 Msa0429770:CDS 45.0%
CATAAAGGGAACCTTGACTG+AGG + chr3_2:81238572-81238591 None:intergenic 45.0%
GCTTCCTCATACAAAAGTGG+TGG - chr3_2:81238771-81238790 Msa0429770:intron 45.0%
!! CCTACCACCACTTTTGTATG+AGG + chr3_2:81238778-81238797 None:intergenic 45.0%
CCTCATACAAAAGTGGTGGT+AGG - chr3_2:81238775-81238794 Msa0429770:intron 45.0%
TGTGTTGAAGGAGTTAGGAG+TGG - chr3_2:81238849-81238868 Msa0429770:intron 45.0%
CATCCCAATTCCAGTGAATG+CGG + chr3_2:81238986-81239005 None:intergenic 45.0%
! GGTATCGGAGTTGAAGTGTA+TGG + chr3_2:81239021-81239040 None:intergenic 45.0%
TAGTTGAGATCATCCAGCGA+GGG + chr3_2:81239133-81239152 None:intergenic 45.0%
TGATCCATGTGCGAGTCAAA+TGG - chr3_2:81239196-81239215 Msa0429770:CDS 45.0%
!! GGACAGAAGCTGATTTTGTG+TGG + chr3_2:81237849-81237868 None:intergenic 45.0%
! GATGGACTTTGATCCGAGAA+AGG + chr3_2:81237870-81237889 None:intergenic 45.0%
GAGAAGATAGGGAGTTGAGA+TGG + chr3_2:81237895-81237914 None:intergenic 45.0%
ACTACCATACAACAGTTGCG+AGG + chr3_2:81238189-81238208 None:intergenic 45.0%
TGGGCTGAAAAGGAGACAAA+AGG - chr3_2:81238400-81238419 Msa0429770:CDS 45.0%
GGGCTGAAAAGGAGACAAAA+GGG - chr3_2:81238401-81238420 Msa0429770:CDS 45.0%
AAGCTATTAATCGACCCAGG+TGG + chr3_2:81238445-81238464 None:intergenic 45.0%
GGAGCAATCGTTTGATGCTT+CGG - chr3_2:81238510-81238529 Msa0429770:CDS 45.0%
CATAAAGGGAACCTTGACTG+AGG + chr3_2:81238572-81238591 None:intergenic 45.0%
GCTTCCTCATACAAAAGTGG+TGG - chr3_2:81238771-81238790 Msa0429770:intron 45.0%
!! CCTACCACCACTTTTGTATG+AGG + chr3_2:81238778-81238797 None:intergenic 45.0%
CCTCATACAAAAGTGGTGGT+AGG - chr3_2:81238775-81238794 Msa0429770:intron 45.0%
TGTGTTGAAGGAGTTAGGAG+TGG - chr3_2:81238849-81238868 Msa0429770:intron 45.0%
CATCCCAATTCCAGTGAATG+CGG + chr3_2:81238986-81239005 None:intergenic 45.0%
! GGTATCGGAGTTGAAGTGTA+TGG + chr3_2:81239021-81239040 None:intergenic 45.0%
TAGTTGAGATCATCCAGCGA+GGG + chr3_2:81239133-81239152 None:intergenic 45.0%
TGATCCATGTGCGAGTCAAA+TGG - chr3_2:81239196-81239215 Msa0429770:CDS 45.0%
GGAGAACAAATGGTTGGCGA+TGG + chr3_2:81237738-81237757 None:intergenic 50.0%
GGAAGCGACGTGAGAAGATA+GGG + chr3_2:81237906-81237925 None:intergenic 50.0%
! AGCAGCGTCTTTGAGAACAG+CGG + chr3_2:81237927-81237946 None:intergenic 50.0%
TGTCTTCTGCCAACGCTGTT+TGG - chr3_2:81237966-81237985 Msa0429770:CDS 50.0%
GTCTTCTGCCAACGCTGTTT+GGG - chr3_2:81237967-81237986 Msa0429770:CDS 50.0%
CATACAACAGTTGCGAGGCA+TGG + chr3_2:81238184-81238203 None:intergenic 50.0%
CATGCCTCGCAACTGTTGTA+TGG - chr3_2:81238182-81238201 Msa0429770:CDS 50.0%
!! TGACTGAGGTGCCATTGAGA+AGG + chr3_2:81238558-81238577 None:intergenic 50.0%
TCTCAATGGCACCTCAGTCA+AGG - chr3_2:81238558-81238577 Msa0429770:CDS 50.0%
ACTAAAGCTGCCGCATTCAC+TGG - chr3_2:81238973-81238992 Msa0429770:intron 50.0%
CTGCCGCATTCACTGGAATT+GGG - chr3_2:81238980-81238999 Msa0429770:intron 50.0%
CGCATTCACTGGAATTGGGA+TGG - chr3_2:81238984-81239003 Msa0429770:intron 50.0%
TTCACTGGAATTGGGATGGC+TGG - chr3_2:81238988-81239007 Msa0429770:CDS 50.0%
AGTTGAGATCATCCAGCGAG+GGG + chr3_2:81239132-81239151 None:intergenic 50.0%
GTAGTTGAGATCATCCAGCG+AGG + chr3_2:81239134-81239153 None:intergenic 50.0%
GGAGAACAAATGGTTGGCGA+TGG + chr3_2:81237738-81237757 None:intergenic 50.0%
GGAAGCGACGTGAGAAGATA+GGG + chr3_2:81237906-81237925 None:intergenic 50.0%
! AGCAGCGTCTTTGAGAACAG+CGG + chr3_2:81237927-81237946 None:intergenic 50.0%
TGTCTTCTGCCAACGCTGTT+TGG - chr3_2:81237966-81237985 Msa0429770:CDS 50.0%
GTCTTCTGCCAACGCTGTTT+GGG - chr3_2:81237967-81237986 Msa0429770:CDS 50.0%
CATACAACAGTTGCGAGGCA+TGG + chr3_2:81238184-81238203 None:intergenic 50.0%
CATGCCTCGCAACTGTTGTA+TGG - chr3_2:81238182-81238201 Msa0429770:CDS 50.0%
!! TGACTGAGGTGCCATTGAGA+AGG + chr3_2:81238558-81238577 None:intergenic 50.0%
TCTCAATGGCACCTCAGTCA+AGG - chr3_2:81238558-81238577 Msa0429770:CDS 50.0%
ACTAAAGCTGCCGCATTCAC+TGG - chr3_2:81238973-81238992 Msa0429770:intron 50.0%
CTGCCGCATTCACTGGAATT+GGG - chr3_2:81238980-81238999 Msa0429770:intron 50.0%
CGCATTCACTGGAATTGGGA+TGG - chr3_2:81238984-81239003 Msa0429770:intron 50.0%
TTCACTGGAATTGGGATGGC+TGG - chr3_2:81238988-81239007 Msa0429770:CDS 50.0%
AGTTGAGATCATCCAGCGAG+GGG + chr3_2:81239132-81239151 None:intergenic 50.0%
GTAGTTGAGATCATCCAGCG+AGG + chr3_2:81239134-81239153 None:intergenic 50.0%
! AGCGCAGTTTGGAGCGACAA+TGG + chr3_2:81237797-81237816 None:intergenic 55.0%
!! TCTCCTCGCTGTTGGTTCTG+AGG - chr3_2:81237820-81237839 Msa0429770:three_prime_UTR 55.0%
!! CTCCTCGCTGTTGGTTCTGA+GGG - chr3_2:81237821-81237840 Msa0429770:three_prime_UTR 55.0%
TAGGGAGTTGAGATGGCCGA+TGG + chr3_2:81237888-81237907 None:intergenic 55.0%
CGGAAGCGACGTGAGAAGAT+AGG + chr3_2:81237907-81237926 None:intergenic 55.0%
AGAAGACAAGCATGGACCGC+CGG + chr3_2:81237954-81237973 None:intergenic 55.0%
! GCGTTGGCAGAAGACAAGCA+TGG + chr3_2:81237962-81237981 None:intergenic 55.0%
GCTGCCGCATTCACTGGAAT+TGG - chr3_2:81238979-81238998 Msa0429770:intron 55.0%
CAGCGAGGGGATTATGCACT+TGG + chr3_2:81239119-81239138 None:intergenic 55.0%
CAAGTGCATAATCCCCTCGC+TGG - chr3_2:81239117-81239136 Msa0429770:CDS 55.0%
! AGCGCAGTTTGGAGCGACAA+TGG + chr3_2:81237797-81237816 None:intergenic 55.0%
!! TCTCCTCGCTGTTGGTTCTG+AGG - chr3_2:81237820-81237839 Msa0429770:three_prime_UTR 55.0%
!! CTCCTCGCTGTTGGTTCTGA+GGG - chr3_2:81237821-81237840 Msa0429770:three_prime_UTR 55.0%
TAGGGAGTTGAGATGGCCGA+TGG + chr3_2:81237888-81237907 None:intergenic 55.0%
CGGAAGCGACGTGAGAAGAT+AGG + chr3_2:81237907-81237926 None:intergenic 55.0%
AGAAGACAAGCATGGACCGC+CGG + chr3_2:81237954-81237973 None:intergenic 55.0%
! GCGTTGGCAGAAGACAAGCA+TGG + chr3_2:81237962-81237981 None:intergenic 55.0%
GCTGCCGCATTCACTGGAAT+TGG - chr3_2:81238979-81238998 Msa0429770:intron 55.0%
CAGCGAGGGGATTATGCACT+TGG + chr3_2:81239119-81239138 None:intergenic 55.0%
CAAGTGCATAATCCCCTCGC+TGG - chr3_2:81239117-81239136 Msa0429770:CDS 55.0%
CGAGGAGACTGAGCGCAGTT+TGG + chr3_2:81237808-81237827 None:intergenic 60.0%
GACCCTCAGAACCAACAGCG+AGG + chr3_2:81237826-81237845 None:intergenic 60.0%
CTCAAAGACGCTGCTCCTGC+CGG - chr3_2:81237932-81237951 Msa0429770:CDS 60.0%
CGAGGAGACTGAGCGCAGTT+TGG + chr3_2:81237808-81237827 None:intergenic 60.0%
GACCCTCAGAACCAACAGCG+AGG + chr3_2:81237826-81237845 None:intergenic 60.0%
CTCAAAGACGCTGCTCCTGC+CGG - chr3_2:81237932-81237951 Msa0429770:CDS 60.0%
GCGCTCAGTCTCCTCGCTGT+TGG - chr3_2:81237812-81237831 Msa0429770:three_prime_UTR 65.0%
AAAGACGCTGCTCCTGCCGG+CGG - chr3_2:81237935-81237954 Msa0429770:CDS 65.0%
GCGCTCAGTCTCCTCGCTGT+TGG - chr3_2:81237812-81237831 Msa0429770:three_prime_UTR 65.0%
AAAGACGCTGCTCCTGCCGG+CGG - chr3_2:81237935-81237954 Msa0429770:CDS 65.0%
GACAAGCATGGACCGCCGGC+AGG + chr3_2:81237950-81237969 None:intergenic 70.0%
GACAAGCATGGACCGCCGGC+AGG + chr3_2:81237950-81237969 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 81237636 81239431 81237636 ID=Msa0429770;Name=Msa0429770
chr3_2 mRNA 81237636 81239431 81237636 ID=Msa0429770-mRNA-1;Parent=Msa0429770;Name=Msa0429770-mRNA-1;_AED=0.08;_eAED=0.08;_QI=29|1|1|1|1|1|2|288|396
chr3_2 exon 81237636 81238697 81237636 ID=Msa0429770-mRNA-1:exon:22415;Parent=Msa0429770-mRNA-1
chr3_2 exon 81238986 81239431 81238986 ID=Msa0429770-mRNA-1:exon:22414;Parent=Msa0429770-mRNA-1
chr3_2 five_prime_UTR 81239403 81239431 81239403 ID=Msa0429770-mRNA-1:five_prime_utr;Parent=Msa0429770-mRNA-1
chr3_2 CDS 81238986 81239402 81238986 ID=Msa0429770-mRNA-1:cds;Parent=Msa0429770-mRNA-1
chr3_2 CDS 81237924 81238697 81237924 ID=Msa0429770-mRNA-1:cds;Parent=Msa0429770-mRNA-1
chr3_2 three_prime_UTR 81237636 81237923 81237636 ID=Msa0429770-mRNA-1:three_prime_utr;Parent=Msa0429770-mRNA-1
Gene Sequence

>Msa0429770

ATGGATTACGTTCGTGAATCAATCAAAAACCTTACCAACCATTTCTTCACCAAAAAAGAAAAATCTATGACCATCGCCAACCATTTGTTCTCCAAAGAAGAATATAAAGACAAGAATGTAGTGTTTTCGCCATTGTCGCTCCAAACTGCGCTCAGTCTCCTCGCTGTTGGTTCTGAGGGTCCCACACAAAATCAGCTTCTGTCCTTTCTCGGATCAAAGTCCATCGGCCATCTCAACTCCCTATCTTCTCACGTCGCTTCCGCTGTTCTCAAAGACGCTGCTCCTGCCGGCGGTCCATGCTTGTCTTCTGCCAACGCTGTTTGGGTTGAAAAAACCCTTTCTGTTTACCCTTCCTTCAAAGAAACTGTTGCTACTCATTATATGGCCACTCTCAAATCACTTGATTTCATTAACAATGCTAATAAAGCAACCCAATCAGTGAATTTATGGGCTGAAAAGGAGACAAAAGGGCTAATTCGTAATTTTCTTCCACCTGGGTCGATTAATAGCTTAACTAGACTCATCTTGACAAATGCATTATACTTCAAAGGAGCATGGGAGCAATCGTTTGATGCTTCGGAAACAAAAGACTACGATTTTCACCTTCTCAATGGCACCTCAGTCAAGGTTCCCTTTATGACTAGCATGAAGAGGCAGTTTATCAGTGCTTTTGATGGCTTTAAGGTCCTTAGTCTTCCTTACAAGCAAGGTGAAGATGAGCGACAATTCTCAATGTACGTTTTTCTTCCAGATGCAAAAGATGGGTTGTTAGGTTTGATTGAGAAAGCGGCTACTGAGTCTAACTTCCTAGAAGACAAGCTTCCTCATACAAAAGTGGTGGTAGGTGATTTCAGAATTCCAAGATTCAATATTTCTTTTGAGCTTGAAATTTCTGATGTGTTGAAGGAGTTAGGAGTGGTTTTACCTTTCTCTATTGGAGGTTTGACAAAAATAGTGGACTCTCCAATTAGTGTTTCTACAGTATTGCAAAAGTCTGTCATTGAAGTAAATGAAGAAGGCACTAAAGCTGCCGCATTCACTGGAATTGGGATGGCTGGATGTTGTCCATACACTTCAACTCCGATACCAATAGACTTTGTAGCTGACCACCCTTTCTTGTTTTTGATTAGAGAAGATTTGTCTGGTACAATACTCTTTGTTGGCCAAGTGCATAATCCCCTCGCTGGATGA
Protein sequence

>Msa0429770

MDYVRESIKNLTNHFFTKKEKSMTIANHLFSKEEYKDKNVVFSPLSLQTALSLLAVGSEGPTQNQLLSFLGSKSIGHLNSLSSHVASAVLKDAAPAGGPCLSSANAVWVEKTLSVYPSFKETVATHYMATLKSLDFINNANKATQSVNLWAEKETKGLIRNFLPPGSINSLTRLILTNALYFKGAWEQSFDASETKDYDFHLLNGTSVKVPFMTSMKRQFISAFDGFKVLSLPYKQGEDERQFSMYVFLPDAKDGLLGLIEKAATESNFLEDKLPHTKVVVGDFRIPRFNISFELEISDVLKELGVVLPFSIGGLTKIVDSPISVSTVLQKSVIEVNEEGTKAAAFTGIGMAGCCPYTSTPIPIDFVADHPFLFLIREDLSGTILFVGQVHNPLAG*