AlfalfaGEDB | Msa0500970

M. sativa cultivar zhongmu-4 / Msa0500970

KEGG: K13963
GO: GO:0003674 GO:0004857 GO:0004866 GO:0004867 GO:0004869 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009892 GO:0010466 GO:0010605 GO:0010951 GO:0019222 GO:0030162 GO:0030234 GO:0030414 GO:0031323 GO:0031324 GO:0032268 GO:0032269 GO:0043086 GO:0044092 GO:0044421 GO:0044424 GO:0044464 GO:0045861 GO:0048046 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0052547 GO:0052548 GO:0060255 GO:0061134 GO:0061135 GO:0065007 GO:0065009 GO:0080090 GO:0098772
PFAM: PF00079.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0500970	XP_003602984.1	68.182	396	119	1	1	396	1	389	0.0	540

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0500970	sp\|Q9S7T8\|SPZX_ARATH	48.500	400	190	7	1	394	1	390	1.18e-122	363

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0500970	G7J5R9	68.182	396	119	1	1	396	1	389	0.0	540

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0015100	Msa0500970	0.802550	5.318483e-49	-8.615850e-47
Msa0049770	Msa0500970	0.803315	3.697059e-49	-8.615850e-47
Msa0088550	Msa0500970	0.802704	4.945137e-49	-8.615850e-47
Msa0135360	Msa0500970	0.802074	6.664888e-49	-8.615850e-47
Msa0179860	Msa0500970	0.830812	2.378196e-55	-8.615850e-47
Msa0185640	Msa0500970	-0.814119	1.812079e-51	-8.615850e-47
Msa0429710	Msa0500970	0.934350	4.629742e-96	-8.615850e-47
Msa0429770	Msa0500970	0.964568	1.718099e-123	-8.615850e-47
Msa0429780	Msa0500970	0.809163	2.167235e-50	-8.615850e-47
Msa0429800	Msa0500970	0.913966	3.328848e-84	-8.615850e-47
Msa0342340	Msa0500970	-0.810759	9.822763e-51	-8.615850e-47
Msa0344830	Msa0500970	0.822373	2.452866e-53	-8.615850e-47
Msa0500970	Msa0501470	0.802368	5.799856e-49	-8.615850e-47
Msa0500970	Msa0528970	0.804601	1.997241e-49	-8.615850e-47
Msa0500970	Msa0543900	0.817209	3.713116e-52	-8.615850e-47
Msa0500970	Msa0564510	0.810846	9.406768e-51	-8.615850e-47
Msa0500970	Msa0599770	0.826636	2.433143e-54	-8.615850e-47
Msa0500970	Msa0607540	0.802234	6.178701e-49	-8.615850e-47
Msa0500970	Msa0641020	0.822164	2.741812e-53	-8.615850e-47
Msa0500970	Msa0678820	0.812413	4.293473e-51	-8.615850e-47
Msa0500970	Msa0718240	0.809016	2.330187e-50	-8.615850e-47
Msa0500970	Msa0722930	0.805453	1.325310e-49	-8.615850e-47
Msa0500970	Msa0723140	0.803341	3.650896e-49	-8.615850e-47
Msa0500970	Msa0752580	0.818412	1.986961e-52	-8.615850e-47
Msa0500970	Msa0754500	0.820365	7.128636e-53	-8.615850e-47
Msa0500970	Msa0776030	0.810814	9.558919e-51	-8.615850e-47
Msa0500970	Msa0847200	0.807474	4.966269e-50	-8.615850e-47
Msa0500970	Msa0951720	0.802723	4.900826e-49	-8.615850e-47
Msa0500970	Msa0961420	-0.802181	6.338415e-49	-8.615850e-47
Msa0500970	Msa0991670	0.805900	1.067476e-49	-8.615850e-47
Msa0500970	Msa1000020	0.803757	2.993911e-49	-8.615850e-47
Msa0500970	Msa1036390	0.817033	4.067405e-52	-8.615850e-47
Msa0500970	Msa1054410	0.823003	1.749734e-53	-8.615850e-47
Msa0500970	Msa1055430	0.801740	7.807005e-49	-8.615850e-47
Msa0500970	Msa1076680	0.817507	3.181715e-52	-8.615850e-47
Msa0500970	Msa1139240	0.806223	9.129871e-50	-8.615850e-47
Msa0500970	Msa1204980	-0.811716	6.092266e-51	-8.615850e-47
Msa0500970	Msa1205010	-0.810732	9.957526e-51	-8.615850e-47
Msa0500970	Msa1208340	0.817690	2.893325e-52	-8.615850e-47
Msa0500970	Msa1256540	-0.817071	3.987433e-52	-8.615850e-47
Msa0500970	Msa1271200	0.801847	7.420984e-49	-8.615850e-47
Msa0500970	Msa1296960	-0.811907	5.534651e-51	-8.615850e-47
Msa0500970	Msa1308480	0.813744	2.191563e-51	-8.615850e-47
Msa0500970	Msa1369530	0.802502	5.443129e-49	-8.615850e-47
Msa0500970	Msa1438270	0.806559	7.754850e-50	-8.615850e-47
Msa0500970	Msa1447440	0.823998	1.024023e-53	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0500970	MtrunA17_Chr3g0133481	68.182	396	119	1	1	396	1	389	0.0	540
Msa0500970	MtrunA17_Chr3g0133511	62.716	405	133	5	1	394	1	398	7.91e-175	493
Msa0500970	MtrunA17_Chr3g0133391	63.750	400	130	5	1	396	1	389	1.51e-169	479
Msa0500970	MtrunA17_Chr7g0233731	60.859	396	143	3	2	392	12	400	1.75e-166	474
Msa0500970	MtrunA17_Chr7g0233731	70.968	62	17	1	336	396	399	460	4.52e-17	82.8
Msa0500970	MtrunA17_Chr8g0346621	63.077	390	127	6	12	396	20	397	2.87e-166	471
Msa0500970	MtrunA17_Chr4g0023671	61.347	401	137	5	1	396	1	388	1.45e-165	469
Msa0500970	MtrunA17_Chr3g0083861	61.965	397	132	5	4	394	56	439	1.07e-163	466
Msa0500970	MtrunA17_Chr7g0233701	62.500	400	138	3	2	396	4	396	3.92e-163	463
Msa0500970	MtrunA17_Chr3g0133411	58.458	402	133	5	22	396	44	438	3.23e-157	450
Msa0500970	MtrunA17_Chr3g0133431	59.453	402	141	9	1	395	20	406	5.14e-149	428
Msa0500970	MtrunA17_Chr3g0133531	69.128	298	91	1	98	394	7	304	1.78e-144	412
Msa0500970	MtrunA17_Chr3g0096411	54.412	408	144	7	5	395	9	391	1.63e-142	410
Msa0500970	MtrunA17_Chr2g0302581	54.887	399	157	6	4	394	3	386	1.40e-141	408
Msa0500970	MtrunA17_Chr2g0302611	54.887	399	157	6	4	394	3	386	1.50e-141	408
Msa0500970	MtrunA17_Chr3g0134681	56.430	381	127	6	22	394	67	416	2.23e-137	399
Msa0500970	MtrunA17_Chr3g0083001	55.779	398	129	7	4	394	14	371	1.09e-133	387
Msa0500970	MtrunA17_Chr7g0233691	67.286	269	83	2	133	396	10	278	1.07e-122	356
Msa0500970	MtrunA17_Chr8g0358841	66.541	266	84	2	134	394	2	267	7.77e-122	353
Msa0500970	MtrunA17_Chr7g0233721	67.939	262	79	2	140	396	17	278	8.60e-120	348
Msa0500970	MtrunA17_Chr3g0133371	66.797	256	81	2	143	396	35	288	2.97e-119	347
Msa0500970	MtrunA17_Chr4g0046911	62.069	261	88	3	140	395	5	259	1.33e-106	314
Msa0500970	MtrunA17_Chr7g0233751	54.693	309	115	4	5	306	7	297	2.17e-105	313
Msa0500970	MtrunA17_Chr3g0083041	63.424	257	87	5	142	394	44	297	2.79e-103	307
Msa0500970	MtrunA17_Chr3g0083871	56.705	261	88	3	139	394	9	249	3.21e-93	280
Msa0500970	MtrunA17_Chr8g0346661	66.667	213	69	1	22	234	15	225	1.11e-92	278
Msa0500970	MtrunA17_Chr3g0141031	61.860	215	74	2	187	396	9	220	1.30e-82	251
Msa0500970	MtrunA17_Chr3g0143151	39.899	396	208	12	20	396	26	410	1.86e-75	240
Msa0500970	MtrunA17_Chr2g0302701	57.488	207	77	3	196	394	9	212	2.42e-73	228
Msa0500970	MtrunA17_Chr3g0133091	62.644	174	59	2	180	347	1	174	1.24e-69	218
Msa0500970	MtrunA17_Chr3g0132731	68.243	148	47	0	137	284	11	158	2.36e-67	210
Msa0500970	MtrunA17_Chr3g0133501	67.089	158	45	2	245	395	1	158	4.03e-63	199
Msa0500970	MtrunA17_Chr3g0133401	57.065	184	43	2	213	396	1	148	3.21e-60	192
Msa0500970	MtrunA17_Chr3g0133471	62.275	167	52	4	213	370	1	165	1.02e-58	188
Msa0500970	MtrunA17_Chr8g0346651	59.615	156	54	3	245	396	1	151	4.95e-54	176
Msa0500970	MtrunA17_Chr3g0134651	56.129	155	64	1	204	354	3	157	5.05e-53	174
Msa0500970	MtrunA17_Chr4g0046951	66.667	114	38	0	140	253	5	118	3.39e-50	165
Msa0500970	MtrunA17_Chr7g0233711	55.319	141	56	1	2	142	4	137	3.08e-45	153
Msa0500970	MtrunA17_Chr7g0233681	52.482	141	66	1	1	140	1	141	5.90e-43	147
Msa0500970	MtrunA17_Chr3g0133351	58.696	138	47	3	1	138	1	128	4.34e-42	145
Msa0500970	MtrunA17_Chr3g0134661	65.385	104	36	0	23	126	1	104	4.61e-41	140
Msa0500970	MtrunA17_Chr8g0358851	56.522	138	53	1	1	138	1	131	5.44e-41	141
Msa0500970	MtrunA17_Chr3g0133521	64.583	96	34	0	140	235	2	97	1.13e-38	134
Msa0500970	MtrunA17_Chr4g0046941	58.120	117	47	1	22	138	16	130	2.09e-36	129
Msa0500970	MtrunA17_Chr4g0046961	57.851	121	42	2	274	390	2	117	1.55e-31	116
Msa0500970	MtrunA17_Chr3g0141021	53.521	71	33	0	123	193	1	71	3.23e-22	90.1
Msa0500970	MtrunA17_Chr3g0132691	67.213	61	20	0	213	273	1	61	8.73e-22	88.2
Msa0500970	MtrunA17_Chr3g0133491	89.130	46	5	0	351	396	1	46	1.04e-21	87.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0500970	AT1G47710.1	48.500	400	190	7	1	394	1	390	1.20e-123	363
Msa0500970	AT1G47710.2	48.500	400	190	7	1	394	28	417	5.81e-123	362
Msa0500970	AT3G45220.1	45.924	368	179	4	39	393	30	390	6.24e-109	325
Msa0500970	AT2G25240.1	47.658	363	172	7	39	393	30	382	8.77e-108	322
Msa0500970	AT2G26390.1	46.594	367	173	8	39	393	31	386	1.87e-106	319
Msa0500970	AT1G64030.1	42.386	394	198	6	4	393	3	371	1.81e-98	298
Msa0500970	AT1G62170.1	42.935	368	180	5	36	395	88	433	1.89e-97	297
Msa0500970	AT2G14540.1	44.875	361	178	4	36	393	55	397	2.43e-95	291
Msa0500970	AT1G62170.2	39.651	401	179	6	36	395	88	466	1.82e-91	283
Msa0500970	AT2G35580.1	42.577	357	181	7	43	393	33	371	2.43e-91	280
Msa0500970	AT1G64010.2	47.907	215	91	3	180	393	1	195	1.98e-63	202
Msa0500970	AT1G64010.1	47.000	200	85	3	195	393	2	181	1.95e-55	181
Msa0500970	AT1G62160.1	41.000	200	91	5	202	395	42	220	1.70e-34	127
Msa0500970	AT1G63280.1	53.390	118	51	2	136	251	5	120	2.62e-34	124
Msa0500970	AT1G51330.1	49.107	112	54	2	137	245	29	140	2.09e-27	107
Msa0500970	AT1G64020.1	35.398	113	70	3	18	129	10	120	1.69e-12	64.3

Find 99 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTAGATGATGTTAAGATTTA+TGG	0.057794	3_4:+41637346	Msa0500970:three_prime_UTR
CAACCCAATCAGTGAATTTA+TGG	0.159817	3_4:+41636421	Msa0500970:CDS
TATGAGGAAGCTTGTCTTCT+AGG	0.205127	3_4:-41636800	None:intergenic
CTTGTCTTTATATTCTTCTT+TGG	0.244807	3_4:-41635797	None:intergenic
TGTCTTCTGCCAACGCTGTT+TGG	0.258315	3_4:+41636007	Msa0500970:CDS
GTCTTCTGCCAACGCTGTTT+GGG	0.287560	3_4:+41636008	Msa0500970:CDS
CCTCTTCATGCTAGTCATAA+AGG	0.293948	3_4:-41636625	None:intergenic
CAATGAATTAATTCTTCTAT+TGG	0.297591	3_4:-41637194	None:intergenic
AACTGTTGCTACTCATTATA+TGG	0.315904	3_4:+41636068	Msa0500970:CDS
GATGCAAAAGATGGGTTGTT+AGG	0.331478	3_4:+41636744	Msa0500970:CDS
CGGAAGCGACGTGAGAAGAT+AGG	0.331599	3_4:-41635945	None:intergenic
GCTGCCGCATTCACTGGAAT+TGG	0.345550	3_4:+41637020	Msa0500970:CDS
TCATCTTCACCTTGCTTGTA+AGG	0.348281	3_4:-41636690	None:intergenic
AATCAGCTTCTGTCCTTTCT+CGG	0.370054	3_4:+41635895	Msa0500970:CDS
CGAGGAGACTGAGCGCAGTT+TGG	0.373483	3_4:-41635846	None:intergenic
CAATAGAAGAATTAATTCAT+TGG	0.380606	3_4:+41637195	Msa0500970:three_prime_UTR
TCTGATGTGTTGAAGGAGTT+AGG	0.381460	3_4:+41636885	Msa0500970:CDS
AGCCCATAAATTCACTGATT+GGG	0.386856	3_4:-41636424	None:intergenic
ATTCTTCTGGTTTGAATGGT+TGG	0.391216	3_4:-41635685	None:intergenic
AATACTGTAGAAACACTAAT+TGG	0.391329	3_4:-41636957	None:intergenic
CAGCCCATAAATTCACTGAT+TGG	0.401585	3_4:-41636425	None:intergenic
GGAGCAATCGTTTGATGCTT+CGG	0.404813	3_4:+41636551	Msa0500970:CDS
TCTGGTACAATACTCTTTGT+TGG	0.408824	3_4:+41637134	Msa0500970:CDS
CATGGATCATATCTAATTGA+TGG	0.414034	3_4:-41637223	None:intergenic
TGAAATTTCTGATGTGTTGA+AGG	0.418942	3_4:+41636878	Msa0500970:CDS
AACCATTCAAACCAGAAGAA+TGG	0.422288	3_4:+41635687	Msa0500970:exon
ATTCTTCTTTGGAGAACAAA+TGG	0.423124	3_4:-41635786	None:intergenic
ATCCATTCTTCTGGTTTGAA+TGG	0.424273	3_4:-41635689	None:intergenic
CTCTTCATGCTAGTCATAAA+GGG	0.432869	3_4:-41636624	None:intergenic
TTTAGGGGTCTGAAATTAGT+TGG	0.434906	3_4:+41637405	Msa0500970:three_prime_UTR
TTTCTTCCAGATGCAAAAGA+TGG	0.444703	3_4:+41636735	Msa0500970:CDS
AGTAGCAACAGTTTCTTTGA+AGG	0.447416	3_4:-41636058	None:intergenic
TGGTGAAGAAATGGTTGGTA+AGG	0.449170	3_4:-41635735	None:intergenic
CTGCCGCATTCACTGGAATT+GGG	0.449429	3_4:+41637021	Msa0500970:CDS
AGTGAATTTATGGGCTGAAA+AGG	0.450449	3_4:+41636431	Msa0500970:CDS
TTCACTGGAATTGGGATGGC+TGG	0.452119	3_4:+41637029	Msa0500970:CDS
TTGATTAGAGAAGATTTGTC+TGG	0.453212	3_4:+41637116	Msa0500970:CDS
ACGAACGTAATCCATTCTTC+TGG	0.456785	3_4:-41635698	None:intergenic
AACCCAATCAGTGAATTTAT+GGG	0.457167	3_4:+41636422	Msa0500970:CDS
GGAAGCGACGTGAGAAGATA+GGG	0.462599	3_4:-41635944	None:intergenic
CAGCGAGGGGATTATGCACT+TGG	0.465525	3_4:-41637157	None:intergenic
TGATCCATGTGCGAGTCAAA+TGG	0.466888	3_4:+41637237	Msa0500970:three_prime_UTR
CTCCTCGCTGTTGGTTCTGA+GGG	0.470422	3_4:+41635862	Msa0500970:CDS
TCAAAAGAAATATTGAATCT+TGG	0.470594	3_4:-41636852	None:intergenic
TGAAGGAAGGGTAAACAGAA+AGG	0.471470	3_4:-41636041	None:intergenic
TGGGCTGAAAAGGAGACAAA+AGG	0.472940	3_4:+41636441	Msa0500970:CDS
ACTAAAGCTGCCGCATTCAC+TGG	0.473621	3_4:+41637014	Msa0500970:CDS
GACAAGCATGGACCGCCGGC+AGG	0.474957	3_4:-41635988	None:intergenic
GTCAAACCTCCAATAGAGAA+AGG	0.475976	3_4:-41636918	None:intergenic
TCTCCTCGCTGTTGGTTCTG+AGG	0.490976	3_4:+41635861	Msa0500970:CDS
GAAGGAAGGGTAAACAGAAA+GGG	0.492254	3_4:-41636040	None:intergenic
CAACAGTTTCTTTGAAGGAA+GGG	0.497373	3_4:-41636053	None:intergenic
CTCAAAGACGCTGCTCCTGC+CGG	0.500555	3_4:+41635973	Msa0500970:CDS
TTCTTTGGAGAACAAATGGT+TGG	0.505452	3_4:-41635782	None:intergenic
GCGCTCAGTCTCCTCGCTGT+TGG	0.506186	3_4:+41635853	Msa0500970:CDS
GGTATCGGAGTTGAAGTGTA+TGG	0.511402	3_4:-41637059	None:intergenic
GCAACAGTTTCTTTGAAGGA+AGG	0.513025	3_4:-41636054	None:intergenic
TGGTCAGCTACAAAGTCTAT+TGG	0.513464	3_4:-41637080	None:intergenic
ACAAATGCATTATACTTCAA+AGG	0.517977	3_4:+41636522	Msa0500970:CDS
GTCATTGAAGTAAATGAAGA+AGG	0.521214	3_4:+41636990	Msa0500970:CDS
TTCTTCCAGATGCAAAAGAT+GGG	0.522138	3_4:+41636736	Msa0500970:CDS
CGCATTCACTGGAATTGGGA+TGG	0.526890	3_4:+41637025	Msa0500970:CDS
GGGCTGAAAAGGAGACAAAA+GGG	0.540477	3_4:+41636442	Msa0500970:CDS
AGAAGACAAGCATGGACCGC+CGG	0.545801	3_4:-41635992	None:intergenic
ATATTATAAAAGAACACAAA+AGG	0.546820	3_4:-41637438	None:intergenic
ATGGATCATATCTAATTGAT+GGG	0.548360	3_4:-41637222	None:intergenic
AGCGCAGTTTGGAGCGACAA+TGG	0.549289	3_4:-41635835	None:intergenic
GCTACAAAGTCTATTGGTAT+CGG	0.556429	3_4:-41637074	None:intergenic
CATTATACTTCAAAGGAGCA+TGG	0.562007	3_4:+41636529	Msa0500970:CDS
CTTAGTCTTCCTTACAAGCA+AGG	0.563134	3_4:+41636681	Msa0500970:CDS
GTTAGGTTTGATTGAGAAAG+CGG	0.567281	3_4:+41636761	Msa0500970:CDS
GGAGAACAAATGGTTGGCGA+TGG	0.571262	3_4:-41635776	None:intergenic
CCTTTATGACTAGCATGAAG+AGG	0.571406	3_4:+41636625	Msa0500970:CDS
GATGGACTTTGATCCGAGAA+AGG	0.581696	3_4:-41635908	None:intergenic
TAATCCATTTGACTCGCACA+TGG	0.584152	3_4:-41637241	None:intergenic
CAAGCTTCCTCATACAAAAG+TGG	0.592026	3_4:+41636809	Msa0500970:CDS
CAAGTGCATAATCCCCTCGC+TGG	0.595687	3_4:+41637158	Msa0500970:CDS
TCTCAATGGCACCTCAGTCA+AGG	0.599345	3_4:+41636599	Msa0500970:CDS
ATTATACTTCAAAGGAGCAT+GGG	0.601138	3_4:+41636530	Msa0500970:CDS
TAGGGAGTTGAGATGGCCGA+TGG	0.601672	3_4:-41635926	None:intergenic
CTTGCTTGTAAGGAAGACTA+AGG	0.608424	3_4:-41636680	None:intergenic
GAGAAGATAGGGAGTTGAGA+TGG	0.618975	3_4:-41635933	None:intergenic
AAAGACGCTGCTCCTGCCGG+CGG	0.624527	3_4:+41635976	Msa0500970:CDS
GAAATCAAGTGATTTGAGAG+TGG	0.625530	3_4:-41636091	None:intergenic
CCTCATACAAAAGTGGTGGT+AGG	0.629641	3_4:+41636816	Msa0500970:CDS
CATCCCAATTCCAGTGAATG+CGG	0.632365	3_4:-41637024	None:intergenic
TGTGTTGAAGGAGTTAGGAG+TGG	0.642269	3_4:+41636890	Msa0500970:CDS
TAGTTGAGATCATCCAGCGA+GGG	0.653122	3_4:-41637171	None:intergenic
TTTCTCGGATCAAAGTCCAT+CGG	0.660434	3_4:+41635910	Msa0500970:CDS
GTTAAGCTATTAATCGACCC+AGG	0.661094	3_4:-41636486	None:intergenic
AGCAGCGTCTTTGAGAACAG+CGG	0.665031	3_4:-41635965	None:intergenic
TGACTGAGGTGCCATTGAGA+AGG	0.673594	3_4:-41636596	None:intergenic
GCTTCCTCATACAAAAGTGG+TGG	0.680566	3_4:+41636812	Msa0500970:CDS
AGTTGAGATCATCCAGCGAG+GGG	0.687329	3_4:-41637170	None:intergenic
GCGTTGGCAGAAGACAAGCA+TGG	0.713189	3_4:-41636000	None:intergenic
CATAAAGGGAACCTTGACTG+AGG	0.721556	3_4:-41636610	None:intergenic
GACCCTCAGAACCAACAGCG+AGG	0.731995	3_4:-41635864	None:intergenic
AAGCTATTAATCGACCCAGG+TGG	0.746620	3_4:-41636483	None:intergenic
GTAGTTGAGATCATCCAGCG+AGG	0.762097	3_4:-41637172	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTGTTTAGAATAGAAAATA+AGG	-	chr3_4:41636202-41636221	None:intergenic	15.0%
!!!	TATATTTGATATTGTTTTGA+AGG	+	chr3_4:41636389-41636408	Msa0500970:intron	15.0%
!!!	TTGAAATTCGTTTTTTTTTT+AGG	+	chr3_4:41637388-41637407	Msa0500970:three_prime_UTR	15.0%
!!!	TGAAATTCGTTTTTTTTTTA+GGG	+	chr3_4:41637389-41637408	Msa0500970:three_prime_UTR	15.0%
!!	ATATTATAAAAGAACACAAA+AGG	-	chr3_4:41637441-41637460	None:intergenic	15.0%
!!!	ATTGTTTAGAATAGAAAATA+AGG	-	chr3_4:41636202-41636221	None:intergenic	15.0%
!!!	TATATTTGATATTGTTTTGA+AGG	+	chr3_4:41636389-41636408	Msa0500970:intron	15.0%
!!!	TTGAAATTCGTTTTTTTTTT+AGG	+	chr3_4:41637388-41637407	Msa0500970:three_prime_UTR	15.0%
!!!	TGAAATTCGTTTTTTTTTTA+GGG	+	chr3_4:41637389-41637408	Msa0500970:three_prime_UTR	15.0%
!!	ATATTATAAAAGAACACAAA+AGG	-	chr3_4:41637441-41637460	None:intergenic	15.0%
!!	TTAATCTACTAATCTAACAA+GGG	-	chr3_4:41636173-41636192	None:intergenic	20.0%
!!	TTTAATCTACTAATCTAACA+AGG	-	chr3_4:41636174-41636193	None:intergenic	20.0%
!!!	TATTTTGTTGTTAAATTGCT+TGG	-	chr3_4:41636280-41636299	None:intergenic	20.0%
!!	TCAAAAGAAATATTGAATCT+TGG	-	chr3_4:41636855-41636874	None:intergenic	20.0%
!!	CAATGAATTAATTCTTCTAT+TGG	-	chr3_4:41637197-41637216	None:intergenic	20.0%
!!	CAATAGAAGAATTAATTCAT+TGG	+	chr3_4:41637195-41637214	Msa0500970:three_prime_UTR	20.0%
!!	TTAGATGATGTTAAGATTTA+TGG	+	chr3_4:41637346-41637365	Msa0500970:three_prime_UTR	20.0%
!!!	GAAATTCGTTTTTTTTTTAG+GGG	+	chr3_4:41637390-41637409	Msa0500970:three_prime_UTR	20.0%
!!	TTAATCTACTAATCTAACAA+GGG	-	chr3_4:41636173-41636192	None:intergenic	20.0%
!!	TTTAATCTACTAATCTAACA+AGG	-	chr3_4:41636174-41636193	None:intergenic	20.0%
!!!	TATTTTGTTGTTAAATTGCT+TGG	-	chr3_4:41636280-41636299	None:intergenic	20.0%
!!	TCAAAAGAAATATTGAATCT+TGG	-	chr3_4:41636855-41636874	None:intergenic	20.0%
!!	CAATGAATTAATTCTTCTAT+TGG	-	chr3_4:41637197-41637216	None:intergenic	20.0%
!!	CAATAGAAGAATTAATTCAT+TGG	+	chr3_4:41637195-41637214	Msa0500970:three_prime_UTR	20.0%
!!	TTAGATGATGTTAAGATTTA+TGG	+	chr3_4:41637346-41637365	Msa0500970:three_prime_UTR	20.0%
!!!	GAAATTCGTTTTTTTTTTAG+GGG	+	chr3_4:41637390-41637409	Msa0500970:three_prime_UTR	20.0%
!!!	TTTCTTTTTTGGTGAAGAAA+TGG	-	chr3_4:41635747-41635766	None:intergenic	25.0%
!!	GGTCATAGATTTTTCTTTTT+TGG	-	chr3_4:41635758-41635777	None:intergenic	25.0%
!	CTTGTCTTTATATTCTTCTT+TGG	-	chr3_4:41635800-41635819	None:intergenic	25.0%
!	ACAAATGCATTATACTTCAA+AGG	+	chr3_4:41636522-41636541	Msa0500970:CDS	25.0%
!	AATACTGTAGAAACACTAAT+TGG	-	chr3_4:41636960-41636979	None:intergenic	25.0%
!	CTCTAATCAAAAACAAGAAA+GGG	-	chr3_4:41637106-41637125	None:intergenic	25.0%
!	TCTCTAATCAAAAACAAGAA+AGG	-	chr3_4:41637107-41637126	None:intergenic	25.0%
!	ATGGATCATATCTAATTGAT+GGG	-	chr3_4:41637225-41637244	None:intergenic	25.0%
!!!	TTTCTTTTTTGGTGAAGAAA+TGG	-	chr3_4:41635747-41635766	None:intergenic	25.0%
!!	GGTCATAGATTTTTCTTTTT+TGG	-	chr3_4:41635758-41635777	None:intergenic	25.0%
!	CTTGTCTTTATATTCTTCTT+TGG	-	chr3_4:41635800-41635819	None:intergenic	25.0%
!	ACAAATGCATTATACTTCAA+AGG	+	chr3_4:41636522-41636541	Msa0500970:CDS	25.0%
!	AATACTGTAGAAACACTAAT+TGG	-	chr3_4:41636960-41636979	None:intergenic	25.0%
!	CTCTAATCAAAAACAAGAAA+GGG	-	chr3_4:41637106-41637125	None:intergenic	25.0%
!	TCTCTAATCAAAAACAAGAA+AGG	-	chr3_4:41637107-41637126	None:intergenic	25.0%
!	ATGGATCATATCTAATTGAT+GGG	-	chr3_4:41637225-41637244	None:intergenic	25.0%
!!!	TTTTTTGGTGAAGAAATGGT+TGG	-	chr3_4:41635743-41635762	None:intergenic	30.0%
!	ATTCTTCTTTGGAGAACAAA+TGG	-	chr3_4:41635789-41635808	None:intergenic	30.0%
	AACTGTTGCTACTCATTATA+TGG	+	chr3_4:41636068-41636087	Msa0500970:CDS	30.0%
	AACCCAATCAGTGAATTTAT+GGG	+	chr3_4:41636422-41636441	Msa0500970:CDS	30.0%
!	ATTATACTTCAAAGGAGCAT+GGG	+	chr3_4:41636530-41636549	Msa0500970:CDS	30.0%
	TGAAATTTCTGATGTGTTGA+AGG	+	chr3_4:41636878-41636897	Msa0500970:CDS	30.0%
	GTCATTGAAGTAAATGAAGA+AGG	+	chr3_4:41636990-41637009	Msa0500970:CDS	30.0%
	TAATCAAAAACAAGAAAGGG+TGG	-	chr3_4:41637103-41637122	None:intergenic	30.0%
	TTGATTAGAGAAGATTTGTC+TGG	+	chr3_4:41637116-41637135	Msa0500970:CDS	30.0%
	CATGGATCATATCTAATTGA+TGG	-	chr3_4:41637226-41637245	None:intergenic	30.0%
!!!	TTTTTTGGTGAAGAAATGGT+TGG	-	chr3_4:41635743-41635762	None:intergenic	30.0%
!	ATTCTTCTTTGGAGAACAAA+TGG	-	chr3_4:41635789-41635808	None:intergenic	30.0%
	AACTGTTGCTACTCATTATA+TGG	+	chr3_4:41636068-41636087	Msa0500970:CDS	30.0%
	AACCCAATCAGTGAATTTAT+GGG	+	chr3_4:41636422-41636441	Msa0500970:CDS	30.0%
!	ATTATACTTCAAAGGAGCAT+GGG	+	chr3_4:41636530-41636549	Msa0500970:CDS	30.0%
	TGAAATTTCTGATGTGTTGA+AGG	+	chr3_4:41636878-41636897	Msa0500970:CDS	30.0%
	GTCATTGAAGTAAATGAAGA+AGG	+	chr3_4:41636990-41637009	Msa0500970:CDS	30.0%
	TAATCAAAAACAAGAAAGGG+TGG	-	chr3_4:41637103-41637122	None:intergenic	30.0%
	TTGATTAGAGAAGATTTGTC+TGG	+	chr3_4:41637116-41637135	Msa0500970:CDS	30.0%
	CATGGATCATATCTAATTGA+TGG	-	chr3_4:41637226-41637245	None:intergenic	30.0%
!!	ATTCTTCTGGTTTGAATGGT+TGG	-	chr3_4:41635688-41635707	None:intergenic	35.0%
	AACCATTCAAACCAGAAGAA+TGG	+	chr3_4:41635687-41635706	Msa0500970:exon	35.0%
!!	ATCCATTCTTCTGGTTTGAA+TGG	-	chr3_4:41635692-41635711	None:intergenic	35.0%
!	TTCTTTGGAGAACAAATGGT+TGG	-	chr3_4:41635785-41635804	None:intergenic	35.0%
!	CAACAGTTTCTTTGAAGGAA+GGG	-	chr3_4:41636056-41636075	None:intergenic	35.0%
	AGTAGCAACAGTTTCTTTGA+AGG	-	chr3_4:41636061-41636080	None:intergenic	35.0%
	GAAATCAAGTGATTTGAGAG+TGG	-	chr3_4:41636094-41636113	None:intergenic	35.0%
	CAACCCAATCAGTGAATTTA+TGG	+	chr3_4:41636421-41636440	Msa0500970:CDS	35.0%
!	AGCCCATAAATTCACTGATT+GGG	-	chr3_4:41636427-41636446	None:intergenic	35.0%
!	AGTGAATTTATGGGCTGAAA+AGG	+	chr3_4:41636431-41636450	Msa0500970:CDS	35.0%
!	ATTCGTAATTTTCTTCCACC+TGG	+	chr3_4:41636468-41636487	Msa0500970:CDS	35.0%
!	TTCGTAATTTTCTTCCACCT+GGG	+	chr3_4:41636469-41636488	Msa0500970:CDS	35.0%
	CATTATACTTCAAAGGAGCA+TGG	+	chr3_4:41636529-41636548	Msa0500970:CDS	35.0%
!	TACGATTTTCACCTTCTCAA+TGG	+	chr3_4:41636585-41636604	Msa0500970:CDS	35.0%
	CTCTTCATGCTAGTCATAAA+GGG	-	chr3_4:41636627-41636646	None:intergenic	35.0%
!	CAGTTTATCAGTGCTTTTGA+TGG	+	chr3_4:41636648-41636667	Msa0500970:CDS	35.0%
	TTTCTTCCAGATGCAAAAGA+TGG	+	chr3_4:41636735-41636754	Msa0500970:CDS	35.0%
	TTCTTCCAGATGCAAAAGAT+GGG	+	chr3_4:41636736-41636755	Msa0500970:CDS	35.0%
	GTTAGGTTTGATTGAGAAAG+CGG	+	chr3_4:41636761-41636780	Msa0500970:CDS	35.0%
!!	GTGGTTTTACCTTTCTCTAT+TGG	+	chr3_4:41636909-41636928	Msa0500970:CDS	35.0%
!	GTTTTACCTTTCTCTATTGG+AGG	+	chr3_4:41636912-41636931	Msa0500970:CDS	35.0%
	TGGAGGTTTGACAAAAATAG+TGG	+	chr3_4:41636929-41636948	Msa0500970:CDS	35.0%
	GCTACAAAGTCTATTGGTAT+CGG	-	chr3_4:41637077-41637096	None:intergenic	35.0%
	TCTGGTACAATACTCTTTGT+TGG	+	chr3_4:41637134-41637153	Msa0500970:CDS	35.0%
!	TTTAGGGGTCTGAAATTAGT+TGG	+	chr3_4:41637405-41637424	Msa0500970:three_prime_UTR	35.0%
!!	ATTCTTCTGGTTTGAATGGT+TGG	-	chr3_4:41635688-41635707	None:intergenic	35.0%
	AACCATTCAAACCAGAAGAA+TGG	+	chr3_4:41635687-41635706	Msa0500970:exon	35.0%
!!	ATCCATTCTTCTGGTTTGAA+TGG	-	chr3_4:41635692-41635711	None:intergenic	35.0%
!	TTCTTTGGAGAACAAATGGT+TGG	-	chr3_4:41635785-41635804	None:intergenic	35.0%
!	CAACAGTTTCTTTGAAGGAA+GGG	-	chr3_4:41636056-41636075	None:intergenic	35.0%
	AGTAGCAACAGTTTCTTTGA+AGG	-	chr3_4:41636061-41636080	None:intergenic	35.0%
	GAAATCAAGTGATTTGAGAG+TGG	-	chr3_4:41636094-41636113	None:intergenic	35.0%
	CAACCCAATCAGTGAATTTA+TGG	+	chr3_4:41636421-41636440	Msa0500970:CDS	35.0%
!	AGCCCATAAATTCACTGATT+GGG	-	chr3_4:41636427-41636446	None:intergenic	35.0%
!	AGTGAATTTATGGGCTGAAA+AGG	+	chr3_4:41636431-41636450	Msa0500970:CDS	35.0%
!	ATTCGTAATTTTCTTCCACC+TGG	+	chr3_4:41636468-41636487	Msa0500970:CDS	35.0%
!	TTCGTAATTTTCTTCCACCT+GGG	+	chr3_4:41636469-41636488	Msa0500970:CDS	35.0%
	CATTATACTTCAAAGGAGCA+TGG	+	chr3_4:41636529-41636548	Msa0500970:CDS	35.0%
!	TACGATTTTCACCTTCTCAA+TGG	+	chr3_4:41636585-41636604	Msa0500970:CDS	35.0%
	CTCTTCATGCTAGTCATAAA+GGG	-	chr3_4:41636627-41636646	None:intergenic	35.0%
!	CAGTTTATCAGTGCTTTTGA+TGG	+	chr3_4:41636648-41636667	Msa0500970:CDS	35.0%
	TTTCTTCCAGATGCAAAAGA+TGG	+	chr3_4:41636735-41636754	Msa0500970:CDS	35.0%
	TTCTTCCAGATGCAAAAGAT+GGG	+	chr3_4:41636736-41636755	Msa0500970:CDS	35.0%
	GTTAGGTTTGATTGAGAAAG+CGG	+	chr3_4:41636761-41636780	Msa0500970:CDS	35.0%
!!	GTGGTTTTACCTTTCTCTAT+TGG	+	chr3_4:41636909-41636928	Msa0500970:CDS	35.0%
!	GTTTTACCTTTCTCTATTGG+AGG	+	chr3_4:41636912-41636931	Msa0500970:CDS	35.0%
	TGGAGGTTTGACAAAAATAG+TGG	+	chr3_4:41636929-41636948	Msa0500970:CDS	35.0%
	GCTACAAAGTCTATTGGTAT+CGG	-	chr3_4:41637077-41637096	None:intergenic	35.0%
	TCTGGTACAATACTCTTTGT+TGG	+	chr3_4:41637134-41637153	Msa0500970:CDS	35.0%
!	TTTAGGGGTCTGAAATTAGT+TGG	+	chr3_4:41637405-41637424	Msa0500970:three_prime_UTR	35.0%
	ACGAACGTAATCCATTCTTC+TGG	-	chr3_4:41635701-41635720	None:intergenic	40.0%
!	TGGTGAAGAAATGGTTGGTA+AGG	-	chr3_4:41635738-41635757	None:intergenic	40.0%
!!	GACAGAAGCTGATTTTGTGT+GGG	-	chr3_4:41635889-41635908	None:intergenic	40.0%
	AATCAGCTTCTGTCCTTTCT+CGG	+	chr3_4:41635895-41635914	Msa0500970:CDS	40.0%
	TTTCTCGGATCAAAGTCCAT+CGG	+	chr3_4:41635910-41635929	Msa0500970:CDS	40.0%
!!	TTTTTCAACCCAAACAGCGT+TGG	-	chr3_4:41636019-41636038	None:intergenic	40.0%
	GAAGGAAGGGTAAACAGAAA+GGG	-	chr3_4:41636043-41636062	None:intergenic	40.0%
	TGAAGGAAGGGTAAACAGAA+AGG	-	chr3_4:41636044-41636063	None:intergenic	40.0%
!	GCAACAGTTTCTTTGAAGGA+AGG	-	chr3_4:41636057-41636076	None:intergenic	40.0%
	CAGCCCATAAATTCACTGAT+TGG	-	chr3_4:41636428-41636447	None:intergenic	40.0%
	GTTAAGCTATTAATCGACCC+AGG	-	chr3_4:41636489-41636508	None:intergenic	40.0%
	CCTCTTCATGCTAGTCATAA+AGG	-	chr3_4:41636628-41636647	None:intergenic	40.0%
	CCTTTATGACTAGCATGAAG+AGG	+	chr3_4:41636625-41636644	Msa0500970:CDS	40.0%
!!	CAGTGCTTTTGATGGCTTTA+AGG	+	chr3_4:41636656-41636675	Msa0500970:CDS	40.0%
	CTTGCTTGTAAGGAAGACTA+AGG	-	chr3_4:41636683-41636702	None:intergenic	40.0%
!	CTTAGTCTTCCTTACAAGCA+AGG	+	chr3_4:41636681-41636700	Msa0500970:CDS	40.0%
	TCATCTTCACCTTGCTTGTA+AGG	-	chr3_4:41636693-41636712	None:intergenic	40.0%
!	AACAACCCATCTTTTGCATC+TGG	-	chr3_4:41636744-41636763	None:intergenic	40.0%
!!	GATGCAAAAGATGGGTTGTT+AGG	+	chr3_4:41636744-41636763	Msa0500970:CDS	40.0%
	TATGAGGAAGCTTGTCTTCT+AGG	-	chr3_4:41636803-41636822	None:intergenic	40.0%
	CAAGCTTCCTCATACAAAAG+TGG	+	chr3_4:41636809-41636828	Msa0500970:CDS	40.0%
	TCTGATGTGTTGAAGGAGTT+AGG	+	chr3_4:41636885-41636904	Msa0500970:CDS	40.0%
	GTCAAACCTCCAATAGAGAA+AGG	-	chr3_4:41636921-41636940	None:intergenic	40.0%
	TGGTCAGCTACAAAGTCTAT+TGG	-	chr3_4:41637083-41637102	None:intergenic	40.0%
!	TAATCCATTTGACTCGCACA+TGG	-	chr3_4:41637244-41637263	None:intergenic	40.0%
	ACGAACGTAATCCATTCTTC+TGG	-	chr3_4:41635701-41635720	None:intergenic	40.0%
!	TGGTGAAGAAATGGTTGGTA+AGG	-	chr3_4:41635738-41635757	None:intergenic	40.0%
!!	GACAGAAGCTGATTTTGTGT+GGG	-	chr3_4:41635889-41635908	None:intergenic	40.0%
	AATCAGCTTCTGTCCTTTCT+CGG	+	chr3_4:41635895-41635914	Msa0500970:CDS	40.0%
	TTTCTCGGATCAAAGTCCAT+CGG	+	chr3_4:41635910-41635929	Msa0500970:CDS	40.0%
!!	TTTTTCAACCCAAACAGCGT+TGG	-	chr3_4:41636019-41636038	None:intergenic	40.0%
	GAAGGAAGGGTAAACAGAAA+GGG	-	chr3_4:41636043-41636062	None:intergenic	40.0%
	TGAAGGAAGGGTAAACAGAA+AGG	-	chr3_4:41636044-41636063	None:intergenic	40.0%
!	GCAACAGTTTCTTTGAAGGA+AGG	-	chr3_4:41636057-41636076	None:intergenic	40.0%
	CAGCCCATAAATTCACTGAT+TGG	-	chr3_4:41636428-41636447	None:intergenic	40.0%
	GTTAAGCTATTAATCGACCC+AGG	-	chr3_4:41636489-41636508	None:intergenic	40.0%
	CCTCTTCATGCTAGTCATAA+AGG	-	chr3_4:41636628-41636647	None:intergenic	40.0%
	CCTTTATGACTAGCATGAAG+AGG	+	chr3_4:41636625-41636644	Msa0500970:CDS	40.0%
!!	CAGTGCTTTTGATGGCTTTA+AGG	+	chr3_4:41636656-41636675	Msa0500970:CDS	40.0%
	CTTGCTTGTAAGGAAGACTA+AGG	-	chr3_4:41636683-41636702	None:intergenic	40.0%
!	CTTAGTCTTCCTTACAAGCA+AGG	+	chr3_4:41636681-41636700	Msa0500970:CDS	40.0%
	TCATCTTCACCTTGCTTGTA+AGG	-	chr3_4:41636693-41636712	None:intergenic	40.0%
!	AACAACCCATCTTTTGCATC+TGG	-	chr3_4:41636744-41636763	None:intergenic	40.0%
!!	GATGCAAAAGATGGGTTGTT+AGG	+	chr3_4:41636744-41636763	Msa0500970:CDS	40.0%
	TATGAGGAAGCTTGTCTTCT+AGG	-	chr3_4:41636803-41636822	None:intergenic	40.0%
	CAAGCTTCCTCATACAAAAG+TGG	+	chr3_4:41636809-41636828	Msa0500970:CDS	40.0%
	TCTGATGTGTTGAAGGAGTT+AGG	+	chr3_4:41636885-41636904	Msa0500970:CDS	40.0%
	GTCAAACCTCCAATAGAGAA+AGG	-	chr3_4:41636921-41636940	None:intergenic	40.0%
	TGGTCAGCTACAAAGTCTAT+TGG	-	chr3_4:41637083-41637102	None:intergenic	40.0%
!	TAATCCATTTGACTCGCACA+TGG	-	chr3_4:41637244-41637263	None:intergenic	40.0%
!!	GGACAGAAGCTGATTTTGTG+TGG	-	chr3_4:41635890-41635909	None:intergenic	45.0%
!	GATGGACTTTGATCCGAGAA+AGG	-	chr3_4:41635911-41635930	None:intergenic	45.0%
	GAGAAGATAGGGAGTTGAGA+TGG	-	chr3_4:41635936-41635955	None:intergenic	45.0%
	ACTACCATACAACAGTTGCG+AGG	-	chr3_4:41636230-41636249	None:intergenic	45.0%
	TGGGCTGAAAAGGAGACAAA+AGG	+	chr3_4:41636441-41636460	Msa0500970:CDS	45.0%
	GGGCTGAAAAGGAGACAAAA+GGG	+	chr3_4:41636442-41636461	Msa0500970:CDS	45.0%
	AAGCTATTAATCGACCCAGG+TGG	-	chr3_4:41636486-41636505	None:intergenic	45.0%
	GGAGCAATCGTTTGATGCTT+CGG	+	chr3_4:41636551-41636570	Msa0500970:CDS	45.0%
	CATAAAGGGAACCTTGACTG+AGG	-	chr3_4:41636613-41636632	None:intergenic	45.0%
	GCTTCCTCATACAAAAGTGG+TGG	+	chr3_4:41636812-41636831	Msa0500970:CDS	45.0%
!!	CCTACCACCACTTTTGTATG+AGG	-	chr3_4:41636819-41636838	None:intergenic	45.0%
	CCTCATACAAAAGTGGTGGT+AGG	+	chr3_4:41636816-41636835	Msa0500970:CDS	45.0%
	TGTGTTGAAGGAGTTAGGAG+TGG	+	chr3_4:41636890-41636909	Msa0500970:CDS	45.0%
	CATCCCAATTCCAGTGAATG+CGG	-	chr3_4:41637027-41637046	None:intergenic	45.0%
!	GGTATCGGAGTTGAAGTGTA+TGG	-	chr3_4:41637062-41637081	None:intergenic	45.0%
	TAGTTGAGATCATCCAGCGA+GGG	-	chr3_4:41637174-41637193	None:intergenic	45.0%
	TGATCCATGTGCGAGTCAAA+TGG	+	chr3_4:41637237-41637256	Msa0500970:three_prime_UTR	45.0%
!!	GGACAGAAGCTGATTTTGTG+TGG	-	chr3_4:41635890-41635909	None:intergenic	45.0%
!	GATGGACTTTGATCCGAGAA+AGG	-	chr3_4:41635911-41635930	None:intergenic	45.0%
	GAGAAGATAGGGAGTTGAGA+TGG	-	chr3_4:41635936-41635955	None:intergenic	45.0%
	ACTACCATACAACAGTTGCG+AGG	-	chr3_4:41636230-41636249	None:intergenic	45.0%
	TGGGCTGAAAAGGAGACAAA+AGG	+	chr3_4:41636441-41636460	Msa0500970:CDS	45.0%
	GGGCTGAAAAGGAGACAAAA+GGG	+	chr3_4:41636442-41636461	Msa0500970:CDS	45.0%
	AAGCTATTAATCGACCCAGG+TGG	-	chr3_4:41636486-41636505	None:intergenic	45.0%
	GGAGCAATCGTTTGATGCTT+CGG	+	chr3_4:41636551-41636570	Msa0500970:CDS	45.0%
	CATAAAGGGAACCTTGACTG+AGG	-	chr3_4:41636613-41636632	None:intergenic	45.0%
	GCTTCCTCATACAAAAGTGG+TGG	+	chr3_4:41636812-41636831	Msa0500970:CDS	45.0%
!!	CCTACCACCACTTTTGTATG+AGG	-	chr3_4:41636819-41636838	None:intergenic	45.0%
	CCTCATACAAAAGTGGTGGT+AGG	+	chr3_4:41636816-41636835	Msa0500970:CDS	45.0%
	TGTGTTGAAGGAGTTAGGAG+TGG	+	chr3_4:41636890-41636909	Msa0500970:CDS	45.0%
	CATCCCAATTCCAGTGAATG+CGG	-	chr3_4:41637027-41637046	None:intergenic	45.0%
!	GGTATCGGAGTTGAAGTGTA+TGG	-	chr3_4:41637062-41637081	None:intergenic	45.0%
	TAGTTGAGATCATCCAGCGA+GGG	-	chr3_4:41637174-41637193	None:intergenic	45.0%
	TGATCCATGTGCGAGTCAAA+TGG	+	chr3_4:41637237-41637256	Msa0500970:three_prime_UTR	45.0%
	GGAGAACAAATGGTTGGCGA+TGG	-	chr3_4:41635779-41635798	None:intergenic	50.0%
	GGAAGCGACGTGAGAAGATA+GGG	-	chr3_4:41635947-41635966	None:intergenic	50.0%
!	AGCAGCGTCTTTGAGAACAG+CGG	-	chr3_4:41635968-41635987	None:intergenic	50.0%
	TGTCTTCTGCCAACGCTGTT+TGG	+	chr3_4:41636007-41636026	Msa0500970:CDS	50.0%
	GTCTTCTGCCAACGCTGTTT+GGG	+	chr3_4:41636008-41636027	Msa0500970:CDS	50.0%
	CATACAACAGTTGCGAGGCA+TGG	-	chr3_4:41636225-41636244	None:intergenic	50.0%
	CATGCCTCGCAACTGTTGTA+TGG	+	chr3_4:41636223-41636242	Msa0500970:intron	50.0%
!!	TGACTGAGGTGCCATTGAGA+AGG	-	chr3_4:41636599-41636618	None:intergenic	50.0%
	TCTCAATGGCACCTCAGTCA+AGG	+	chr3_4:41636599-41636618	Msa0500970:CDS	50.0%
	ACTAAAGCTGCCGCATTCAC+TGG	+	chr3_4:41637014-41637033	Msa0500970:CDS	50.0%
	CTGCCGCATTCACTGGAATT+GGG	+	chr3_4:41637021-41637040	Msa0500970:CDS	50.0%
	CGCATTCACTGGAATTGGGA+TGG	+	chr3_4:41637025-41637044	Msa0500970:CDS	50.0%
	TTCACTGGAATTGGGATGGC+TGG	+	chr3_4:41637029-41637048	Msa0500970:CDS	50.0%
	AGTTGAGATCATCCAGCGAG+GGG	-	chr3_4:41637173-41637192	None:intergenic	50.0%
	GTAGTTGAGATCATCCAGCG+AGG	-	chr3_4:41637175-41637194	None:intergenic	50.0%
	GGAGAACAAATGGTTGGCGA+TGG	-	chr3_4:41635779-41635798	None:intergenic	50.0%
	GGAAGCGACGTGAGAAGATA+GGG	-	chr3_4:41635947-41635966	None:intergenic	50.0%
!	AGCAGCGTCTTTGAGAACAG+CGG	-	chr3_4:41635968-41635987	None:intergenic	50.0%
	TGTCTTCTGCCAACGCTGTT+TGG	+	chr3_4:41636007-41636026	Msa0500970:CDS	50.0%
	GTCTTCTGCCAACGCTGTTT+GGG	+	chr3_4:41636008-41636027	Msa0500970:CDS	50.0%
	CATACAACAGTTGCGAGGCA+TGG	-	chr3_4:41636225-41636244	None:intergenic	50.0%
	CATGCCTCGCAACTGTTGTA+TGG	+	chr3_4:41636223-41636242	Msa0500970:intron	50.0%
!!	TGACTGAGGTGCCATTGAGA+AGG	-	chr3_4:41636599-41636618	None:intergenic	50.0%
	TCTCAATGGCACCTCAGTCA+AGG	+	chr3_4:41636599-41636618	Msa0500970:CDS	50.0%
	ACTAAAGCTGCCGCATTCAC+TGG	+	chr3_4:41637014-41637033	Msa0500970:CDS	50.0%
	CTGCCGCATTCACTGGAATT+GGG	+	chr3_4:41637021-41637040	Msa0500970:CDS	50.0%
	CGCATTCACTGGAATTGGGA+TGG	+	chr3_4:41637025-41637044	Msa0500970:CDS	50.0%
	TTCACTGGAATTGGGATGGC+TGG	+	chr3_4:41637029-41637048	Msa0500970:CDS	50.0%
	AGTTGAGATCATCCAGCGAG+GGG	-	chr3_4:41637173-41637192	None:intergenic	50.0%
	GTAGTTGAGATCATCCAGCG+AGG	-	chr3_4:41637175-41637194	None:intergenic	50.0%
!	AGCGCAGTTTGGAGCGACAA+TGG	-	chr3_4:41635838-41635857	None:intergenic	55.0%
!!	TCTCCTCGCTGTTGGTTCTG+AGG	+	chr3_4:41635861-41635880	Msa0500970:CDS	55.0%
!!	CTCCTCGCTGTTGGTTCTGA+GGG	+	chr3_4:41635862-41635881	Msa0500970:CDS	55.0%
	TAGGGAGTTGAGATGGCCGA+TGG	-	chr3_4:41635929-41635948	None:intergenic	55.0%
	CGGAAGCGACGTGAGAAGAT+AGG	-	chr3_4:41635948-41635967	None:intergenic	55.0%
	AGAAGACAAGCATGGACCGC+CGG	-	chr3_4:41635995-41636014	None:intergenic	55.0%
!	GCGTTGGCAGAAGACAAGCA+TGG	-	chr3_4:41636003-41636022	None:intergenic	55.0%
	GCTGCCGCATTCACTGGAAT+TGG	+	chr3_4:41637020-41637039	Msa0500970:CDS	55.0%
	CAGCGAGGGGATTATGCACT+TGG	-	chr3_4:41637160-41637179	None:intergenic	55.0%
	CAAGTGCATAATCCCCTCGC+TGG	+	chr3_4:41637158-41637177	Msa0500970:CDS	55.0%
!	AGCGCAGTTTGGAGCGACAA+TGG	-	chr3_4:41635838-41635857	None:intergenic	55.0%
!!	TCTCCTCGCTGTTGGTTCTG+AGG	+	chr3_4:41635861-41635880	Msa0500970:CDS	55.0%
!!	CTCCTCGCTGTTGGTTCTGA+GGG	+	chr3_4:41635862-41635881	Msa0500970:CDS	55.0%
	TAGGGAGTTGAGATGGCCGA+TGG	-	chr3_4:41635929-41635948	None:intergenic	55.0%
	CGGAAGCGACGTGAGAAGAT+AGG	-	chr3_4:41635948-41635967	None:intergenic	55.0%
	AGAAGACAAGCATGGACCGC+CGG	-	chr3_4:41635995-41636014	None:intergenic	55.0%
!	GCGTTGGCAGAAGACAAGCA+TGG	-	chr3_4:41636003-41636022	None:intergenic	55.0%
	GCTGCCGCATTCACTGGAAT+TGG	+	chr3_4:41637020-41637039	Msa0500970:CDS	55.0%
	CAGCGAGGGGATTATGCACT+TGG	-	chr3_4:41637160-41637179	None:intergenic	55.0%
	CAAGTGCATAATCCCCTCGC+TGG	+	chr3_4:41637158-41637177	Msa0500970:CDS	55.0%
	CGAGGAGACTGAGCGCAGTT+TGG	-	chr3_4:41635849-41635868	None:intergenic	60.0%
	GACCCTCAGAACCAACAGCG+AGG	-	chr3_4:41635867-41635886	None:intergenic	60.0%
	CTCAAAGACGCTGCTCCTGC+CGG	+	chr3_4:41635973-41635992	Msa0500970:CDS	60.0%
	CGAGGAGACTGAGCGCAGTT+TGG	-	chr3_4:41635849-41635868	None:intergenic	60.0%
	GACCCTCAGAACCAACAGCG+AGG	-	chr3_4:41635867-41635886	None:intergenic	60.0%
	CTCAAAGACGCTGCTCCTGC+CGG	+	chr3_4:41635973-41635992	Msa0500970:CDS	60.0%
	GCGCTCAGTCTCCTCGCTGT+TGG	+	chr3_4:41635853-41635872	Msa0500970:CDS	65.0%
	AAAGACGCTGCTCCTGCCGG+CGG	+	chr3_4:41635976-41635995	Msa0500970:CDS	65.0%
	GCGCTCAGTCTCCTCGCTGT+TGG	+	chr3_4:41635853-41635872	Msa0500970:CDS	65.0%
	AAAGACGCTGCTCCTGCCGG+CGG	+	chr3_4:41635976-41635995	Msa0500970:CDS	65.0%
	GACAAGCATGGACCGCCGGC+AGG	-	chr3_4:41635991-41636010	None:intergenic	70.0%
	GACAAGCATGGACCGCCGGC+AGG	-	chr3_4:41635991-41636010	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_4	gene	41635677	41637472	41635677	ID=Msa0500970;Name=Msa0500970
chr3_4	mRNA	41635677	41637472	41635677	ID=Msa0500970-mRNA-1;Parent=Msa0500970;Name=Msa0500970-mRNA-1;_AED=0.08;_eAED=0.08;_QI=29\|1\|1\|1\|1\|1\|2\|288\|396
chr3_4	exon	41635677	41636122	41635677	ID=Msa0500970-mRNA-1:exon:8708;Parent=Msa0500970-mRNA-1
chr3_4	exon	41636411	41637472	41636411	ID=Msa0500970-mRNA-1:exon:8709;Parent=Msa0500970-mRNA-1
chr3_4	five_prime_UTR	41635677	41635705	41635677	ID=Msa0500970-mRNA-1:five_prime_utr;Parent=Msa0500970-mRNA-1
chr3_4	CDS	41635706	41636122	41635706	ID=Msa0500970-mRNA-1:cds;Parent=Msa0500970-mRNA-1
chr3_4	CDS	41636411	41637184	41636411	ID=Msa0500970-mRNA-1:cds;Parent=Msa0500970-mRNA-1
chr3_4	three_prime_UTR	41637185	41637472	41637185	ID=Msa0500970-mRNA-1:three_prime_utr;Parent=Msa0500970-mRNA-1

Gene Sequence

>Msa0500970

ATGGATTACGTTCGTGAATCAATCAAAAACCTTACCAACCATTTCTTCACCAAAAAAGAAAAATCTATGACCATCGCCAACCATTTGTTCTCCAAAGAAGAATATAAAGACAAGAATGTAGTGTTTTCGCCATTGTCGCTCCAAACTGCGCTCAGTCTCCTCGCTGTTGGTTCTGAGGGTCCCACACAAAATCAGCTTCTGTCCTTTCTCGGATCAAAGTCCATCGGCCATCTCAACTCCCTATCTTCTCACGTCGCTTCCGCTGTTCTCAAAGACGCTGCTCCTGCCGGCGGTCCATGCTTGTCTTCTGCCAACGCTGTTTGGGTTGAAAAAACCCTTTCTGTTTACCCTTCCTTCAAAGAAACTGTTGCTACTCATTATATGGCCACTCTCAAATCACTTGATTTCATTAACAATGCTAATAAAGCAACCCAATCAGTGAATTTATGGGCTGAAAAGGAGACAAAAGGGCTAATTCGTAATTTTCTTCCACCTGGGTCGATTAATAGCTTAACTAGACTCATCTTGACAAATGCATTATACTTCAAAGGAGCATGGGAGCAATCGTTTGATGCTTCGGAAACAAAAGACTACGATTTTCACCTTCTCAATGGCACCTCAGTCAAGGTTCCCTTTATGACTAGCATGAAGAGGCAGTTTATCAGTGCTTTTGATGGCTTTAAGGTCCTTAGTCTTCCTTACAAGCAAGGTGAAGATGAGCGACAATTCTCAATGTACGTTTTTCTTCCAGATGCAAAAGATGGGTTGTTAGGTTTGATTGAGAAAGCGGCTACTGAGTCTAACTTCCTAGAAGACAAGCTTCCTCATACAAAAGTGGTGGTAGGTGATTTCAGAATTCCAAGATTCAATATTTCTTTTGAGCTTGAAATTTCTGATGTGTTGAAGGAGTTAGGAGTGGTTTTACCTTTCTCTATTGGAGGTTTGACAAAAATAGTGGACTCTCCAATTAGTGTTTCTACAGTATTGCAAAAGTCTGTCATTGAAGTAAATGAAGAAGGCACTAAAGCTGCCGCATTCACTGGAATTGGGATGGCTGGATGTTGTCCATACACTTCAACTCCGATACCAATAGACTTTGTAGCTGACCACCCTTTCTTGTTTTTGATTAGAGAAGATTTGTCTGGTACAATACTCTTTGTTGGCCAAGTGCATAATCCCCTCGCTGGATGA

Protein sequence

>Msa0500970

MDYVRESIKNLTNHFFTKKEKSMTIANHLFSKEEYKDKNVVFSPLSLQTALSLLAVGSEGPTQNQLLSFLGSKSIGHLNSLSSHVASAVLKDAAPAGGPCLSSANAVWVEKTLSVYPSFKETVATHYMATLKSLDFINNANKATQSVNLWAEKETKGLIRNFLPPGSINSLTRLILTNALYFKGAWEQSFDASETKDYDFHLLNGTSVKVPFMTSMKRQFISAFDGFKVLSLPYKQGEDERQFSMYVFLPDAKDGLLGLIEKAATESNFLEDKLPHTKVVVGDFRIPRFNISFELEISDVLKELGVVLPFSIGGLTKIVDSPISVSTVLQKSVIEVNEEGTKAAAFTGIGMAGCCPYTSTPIPIDFVADHPFLFLIREDLSGTILFVGQVHNPLAG*