Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472600 | XP_003602432.1 | 83.704 | 135 | 19 | 1 | 359 | 493 | 28 | 159 | 8.18e-64 | 224 |
| Msa0472600 | XP_003602432.1 | 84.906 | 424 | 9 | 4 | 1 | 369 | 1 | 424 | 0.0 | 706 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472600 | sp|Q8LG53|UN932_ARATH | 58.881 | 411 | 111 | 5 | 16 | 368 | 19 | 429 | 2.97e-167 | 483 |
| Msa0472600 | sp|Q8LG53|UN932_ARATH | 73.333 | 135 | 33 | 1 | 359 | 493 | 31 | 162 | 7.51e-55 | 193 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472600 | G7J9P1 | 83.704 | 135 | 19 | 1 | 359 | 493 | 28 | 159 | 3.91e-64 | 224 |
| Msa0472600 | G7J9P1 | 84.906 | 424 | 9 | 4 | 1 | 369 | 1 | 424 | 0.0 | 706 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017120 | Msa0472600 | 0.801086 | 1.063077e-48 | -8.615850e-47 |
| Msa0079250 | Msa0472600 | 0.808813 | 2.575100e-50 | -8.615850e-47 |
| Msa0110710 | Msa0472600 | 0.801647 | 8.157628e-49 | -8.615850e-47 |
| Msa0125230 | Msa0472600 | 0.801563 | 8.486652e-49 | -8.615850e-47 |
| Msa0143080 | Msa0472600 | 0.804196 | 2.425747e-49 | -8.615850e-47 |
| Msa0146020 | Msa0472600 | 0.805490 | 1.302007e-49 | -8.615850e-47 |
| Msa0151690 | Msa0472600 | 0.812089 | 5.051718e-51 | -8.615850e-47 |
| Msa0185390 | Msa0472600 | 0.805908 | 1.063365e-49 | -8.615850e-47 |
| Msa0207000 | Msa0472600 | 0.804651 | 1.950016e-49 | -8.615850e-47 |
| Msa0426330 | Msa0472600 | 0.820055 | 8.393648e-53 | -8.615850e-47 |
| Msa0467800 | Msa0472600 | 0.801710 | 7.918818e-49 | -8.615850e-47 |
| Msa0472530 | Msa0472600 | 0.835998 | 1.210693e-56 | -8.615850e-47 |
| Msa0472600 | Msa0535450 | 0.803428 | 3.502361e-49 | -8.615850e-47 |
| Msa0472600 | Msa0654060 | 0.814723 | 1.332628e-51 | -8.615850e-47 |
| Msa0472600 | Msa0669200 | 0.821094 | 4.846286e-53 | -8.615850e-47 |
| Msa0472600 | Msa0681890 | 0.803518 | 3.355082e-49 | -8.615850e-47 |
| Msa0472600 | Msa0697400 | 0.802033 | 6.798664e-49 | -8.615850e-47 |
| Msa0472600 | Msa0714340 | 0.818208 | 2.209832e-52 | -8.615850e-47 |
| Msa0472600 | Msa0763880 | 0.803726 | 3.038433e-49 | -8.615850e-47 |
| Msa0472600 | Msa0803130 | 0.801957 | 7.046068e-49 | -8.615850e-47 |
| Msa0472600 | Msa0841490 | 0.802615 | 5.157083e-49 | -8.615850e-47 |
| Msa0472600 | Msa0907700 | 0.817426 | 3.318298e-52 | -8.615850e-47 |
| Msa0472600 | Msa0958020 | 0.800841 | 1.192740e-48 | -8.615850e-47 |
| Msa0472600 | Msa1002040 | 0.801775 | 7.678944e-49 | -8.615850e-47 |
| Msa0472600 | Msa1015060 | 0.811138 | 8.134221e-51 | -8.615850e-47 |
| Msa0472600 | Msa1043870 | 0.801486 | 8.801948e-49 | -8.615850e-47 |
| Msa0472600 | Msa1089530 | 0.834035 | 3.781600e-56 | -8.615850e-47 |
| Msa0472600 | Msa1092820 | 0.807509 | 4.881698e-50 | -8.615850e-47 |
| Msa0472600 | Msa1323060 | 0.818503 | 1.895090e-52 | -8.615850e-47 |
| Msa0472600 | Msa1327760 | 0.809219 | 2.108368e-50 | -8.615850e-47 |
| Msa0472600 | Msa1381130 | 0.811391 | 7.168016e-51 | -8.615850e-47 |
| Msa0472600 | Msa1382720 | 0.807585 | 4.704520e-50 | -8.615850e-47 |
| Msa0472600 | Msa1458920 | 0.805409 | 1.353810e-49 | -8.615850e-47 |
| Msa0252180 | Msa0472600 | 0.800118 | 1.674497e-48 | -8.615850e-47 |
| Msa0259560 | Msa0472600 | 0.811158 | 8.052716e-51 | -8.615850e-47 |
| Msa0278620 | Msa0472600 | 0.815730 | 7.960744e-52 | -8.615850e-47 |
| Msa0318000 | Msa0472600 | 0.829040 | 6.429722e-55 | -8.615850e-47 |
| Msa0328210 | Msa0472600 | 0.808753 | 2.653156e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472600 | MtrunA17_Chr3g0128301 | 84.272 | 426 | 10 | 5 | 1 | 369 | 1 | 426 | 0.0 | 699 |
| Msa0472600 | MtrunA17_Chr3g0128301 | 83.704 | 135 | 19 | 1 | 359 | 493 | 28 | 159 | 8.66e-68 | 225 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0472600 | AT1G18010.1 | 58.881 | 411 | 111 | 5 | 16 | 368 | 19 | 429 | 3.02e-168 | 483 |
| Msa0472600 | AT1G18010.1 | 73.333 | 135 | 33 | 1 | 359 | 493 | 31 | 162 | 7.64e-56 | 193 |
| Msa0472600 | AT1G18000.1 | 58.881 | 411 | 111 | 5 | 16 | 368 | 19 | 429 | 3.02e-168 | 483 |
| Msa0472600 | AT1G18000.1 | 73.333 | 135 | 33 | 1 | 359 | 493 | 31 | 162 | 7.64e-56 | 193 |
Find 183 sgRNAs with CRISPR-Local
Find 614 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCACAAATCATCCTTAT+TGG | 0.164299 | 3_3:-75014305 | Msa0472600:CDS |
| GGCATGTTCAATGCTCTTTC+AGG | 0.180358 | 3_3:-75005965 | Msa0472600:CDS |
| GGCATGTTCAATGCTCTTTC+AGG | 0.180358 | 3_3:-75014260 | Msa0472600:CDS |
| CTGTTCTTGGATCTATTATA+TGG | 0.213344 | 3_3:-75005140 | Msa0472600:three_prime_UTR |
| CTGTTCTTGGATCTATTATA+TGG | 0.213344 | 3_3:-75013434 | Msa0472600:CDS |
| ATTAGTGTGGTTGCTGTTCT+TGG | 0.242665 | 3_3:-75005153 | Msa0472600:three_prime_UTR |
| ATTAGTGTGGTTGCTGTTCT+TGG | 0.242665 | 3_3:-75013447 | Msa0472600:CDS |
| AACCATCAAAACTAACAATA+AGG | 0.245935 | 3_3:+75004038 | None:intergenic |
| AGATGCCATGTTTCAGAGTA+TGG | 0.258685 | 3_3:-75013298 | Msa0472600:CDS |
| TGTTTCAGAGTATGGTTTAC+TGG | 0.260675 | 3_3:-75004996 | Msa0472600:three_prime_UTR |
| TGTTTCAGAGTATGGTTTAC+TGG | 0.266519 | 3_3:-75013290 | Msa0472600:CDS |
| GCATCGGAGCAGGTCTATTA+TGG | 0.282301 | 3_3:-75005712 | Msa0472600:CDS |
| TTTCACAAATCATCCTTATT+GGG | 0.293770 | 3_3:-75014304 | Msa0472600:CDS |
| GCATCGGAGCTGGACTATTA+TGG | 0.301187 | 3_3:-75014007 | Msa0472600:CDS |
| GGATGCTATGTTTCAGAGTA+TGG | 0.305991 | 3_3:-75005004 | Msa0472600:three_prime_UTR |
| GTTAATGATGGAACTTATAT+AGG | 0.312658 | 3_3:-75005537 | Msa0472600:three_prime_UTR |
| TTCAACATGGGTGGTGTTAT+TGG | 0.313659 | 3_3:-75005612 | Msa0472600:CDS |
| TTCAACATGGGTGGTGTTAT+TGG | 0.313659 | 3_3:-75013906 | Msa0472600:CDS |
| GTAAGTTCCTTTACGATTCA+TGG | 0.318909 | 3_3:+75005655 | None:intergenic |
| GTAAGTTCCTTTACGATTCA+TGG | 0.318909 | 3_3:+75013950 | None:intergenic |
| CGGTTGTAATTAAGAATAAA+AGG | 0.319960 | 3_3:+75005579 | None:intergenic |
| GTTGAACAATGTGTTCTATT+GGG | 0.323401 | 3_3:-75005259 | Msa0472600:three_prime_UTR |
| TACACAACCTTTGCAGTGTT+TGG | 0.337488 | 3_3:-75005884 | Msa0472600:CDS |
| TGTTCTTGGATCTATTATAT+GGG | 0.338310 | 3_3:-75005139 | Msa0472600:three_prime_UTR |
| TGTTCTTGGATCTATTATAT+GGG | 0.338310 | 3_3:-75013433 | Msa0472600:CDS |
| TGGAACTTATATAGGTTTCA+TGG | 0.341520 | 3_3:-75005529 | Msa0472600:three_prime_UTR |
| TGGAACTTATATAGGTTTCA+TGG | 0.341520 | 3_3:-75013823 | Msa0472600:intron |
| GGTTGAACAATGTGTTCTAT+TGG | 0.354183 | 3_3:-75005260 | Msa0472600:three_prime_UTR |
| AGGTACACAGGATTCTATAA+AGG | 0.355926 | 3_3:-75012847 | Msa0472600:CDS |
| AGTATGGTTTACTGGTCTAT+TGG | 0.363404 | 3_3:-75013282 | Msa0472600:CDS |
| AATTGGGATTGGTTACACTA+TGG | 0.364274 | 3_3:-75005217 | Msa0472600:three_prime_UTR |
| AATTGGGATTGGTTACACTA+TGG | 0.364274 | 3_3:-75013511 | Msa0472600:CDS |
| GCTGTTCTCGGCATCGGAGC+TGG | 0.372968 | 3_3:-75014017 | Msa0472600:CDS |
| ACATAAACATGGCAAGGTCT+TGG | 0.373279 | 3_3:-75005091 | Msa0472600:three_prime_UTR |
| ACATAAACATGGCAAGGTCT+TGG | 0.373279 | 3_3:-75013385 | Msa0472600:CDS |
| TGGCACAGTTGATAGTGAAT+TGG | 0.376213 | 3_3:-75004083 | Msa0472600:three_prime_UTR |
| TATTGGGGAGCACAAATGAT+AGG | 0.383645 | 3_3:-75013537 | Msa0472600:CDS |
| TTCTTAAATTGTTCTACAAT+TGG | 0.385721 | 3_3:-75005383 | Msa0472600:three_prime_UTR |
| TTCTTAAATTGTTCTACAAT+TGG | 0.385721 | 3_3:-75013677 | Msa0472600:CDS |
| TTCACAATCAACTGTGTCAT+TGG | 0.386175 | 3_3:+75012769 | None:intergenic |
| TCTTATTAACATGATTAAAC+TGG | 0.395610 | 3_3:+75005307 | None:intergenic |
| TCCGGTGCTGTTCTCGGCAT+CGG | 0.396725 | 3_3:-75014023 | Msa0472600:CDS |
| ATAGTTGCCGGCGCCCTTCT+CGG | 0.399605 | 3_3:-75005734 | Msa0472600:CDS |
| TTCAATGCTCTTTCAGGAAT+GGG | 0.403885 | 3_3:-75005959 | Msa0472600:CDS |
| TTCAATGCTCTTTCAGGAAT+GGG | 0.404295 | 3_3:-75014254 | Msa0472600:CDS |
| TGACACAGTTGATTGTGAAT+TGG | 0.408150 | 3_3:-75012765 | Msa0472600:CDS |
| GCCCTTCTCGGCATCGGAGC+AGG | 0.411839 | 3_3:-75005722 | Msa0472600:CDS |
| GCACAAATGATAGGGTCAAT+TGG | 0.413131 | 3_3:-75005234 | Msa0472600:three_prime_UTR |
| GCACAAATGATAGGGTCAAT+TGG | 0.413131 | 3_3:-75013528 | Msa0472600:CDS |
| TATTGGGGAGCACAAATGAT+AGG | 0.414914 | 3_3:-75005243 | Msa0472600:three_prime_UTR |
| GCTTGTGTAGAGTGCGGTTA+AGG | 0.415646 | 3_3:+75014193 | None:intergenic |
| AGGTACACTGGATTCTATAA+AGG | 0.416951 | 3_3:-75004165 | Msa0472600:three_prime_UTR |
| GTAGTTTCCGGTGCTGTTCT+CGG | 0.424731 | 3_3:-75014029 | Msa0472600:CDS |
| GTTGTTTATGATTATAGTAA+AGG | 0.424936 | 3_3:+75005771 | None:intergenic |
| TTCTCATGATTCCTGCAGCT+TGG | 0.429163 | 3_3:-75005353 | Msa0472600:three_prime_UTR |
| TTCTCATGATTCCTGCAGCT+TGG | 0.429163 | 3_3:-75013647 | Msa0472600:CDS |
| TAGAAAGAAAAGAGGAATTG+TGG | 0.430494 | 3_3:-75005178 | Msa0472600:three_prime_UTR |
| TAGAAAGAAAAGAGGAATTG+TGG | 0.430494 | 3_3:-75013472 | Msa0472600:CDS |
| TTACTGGTCTATTGGAGCAT+TGG | 0.434243 | 3_3:-75013274 | Msa0472600:CDS |
| TTTGCAGTGTTTGGTATCCT+AGG | 0.434690 | 3_3:-75005875 | Msa0472600:CDS |
| ACCATCAAAACTAACAATAA+GGG | 0.439660 | 3_3:+75004039 | None:intergenic |
| CACAAATGATAGGGTCAATT+GGG | 0.440466 | 3_3:-75005233 | Msa0472600:three_prime_UTR |
| CACAAATGATAGGGTCAATT+GGG | 0.440466 | 3_3:-75013527 | Msa0472600:CDS |
| TTTAAGAGTAGAAAGAAAAG+AGG | 0.440838 | 3_3:-75005186 | Msa0472600:three_prime_UTR |
| TTTAAGAGTAGAAAGAAAAG+AGG | 0.440838 | 3_3:-75013480 | Msa0472600:CDS |
| AGAAAGAAAAGAGGAATTGT+GGG | 0.444597 | 3_3:-75005177 | Msa0472600:three_prime_UTR |
| AGAAAGAAAAGAGGAATTGT+GGG | 0.444597 | 3_3:-75013471 | Msa0472600:CDS |
| GACACAGTTGATTGTGAATT+GGG | 0.445991 | 3_3:-75012764 | Msa0472600:intron |
| GTGCCATTGGAGACACGTTA+TGG | 0.446519 | 3_3:+75004100 | None:intergenic |
| GAAGGAGCAACTTGTTTGAC+AGG | 0.447780 | 3_3:+75003979 | None:intergenic |
| ACAGACCCATTGTTATTTGA+AGG | 0.448515 | 3_3:+75003961 | None:intergenic |
| GGCACAGTTGATAGTGAATT+GGG | 0.449830 | 3_3:-75004082 | Msa0472600:three_prime_UTR |
| GCCGGCGCCCTTCTCGGCAT+CGG | 0.454685 | 3_3:-75005728 | Msa0472600:CDS |
| CATCGGAGCAGGTCTATTAT+GGG | 0.456390 | 3_3:-75005711 | Msa0472600:CDS |
| TTCACTATCAACTGTGCCAT+TGG | 0.456806 | 3_3:+75004087 | None:intergenic |
| ACTAAGCTATCCGTTATTGT+TGG | 0.457774 | 3_3:-75012731 | Msa0472600:intron |
| GGTACACAGGATTCTATAAA+GGG | 0.462985 | 3_3:-75012846 | Msa0472600:CDS |
| CTTTCAGGAATGGGTGGTGG+TGG | 0.463947 | 3_3:-75014245 | Msa0472600:CDS |
| GGTTGTGTAAAGTGCGGTTA+AGG | 0.466041 | 3_3:+75005898 | None:intergenic |
| AGTAAAGTTATTCGTGATGA+TGG | 0.467385 | 3_3:-75005459 | Msa0472600:three_prime_UTR |
| AGTAAAGTTATTCGTGATGA+TGG | 0.467385 | 3_3:-75013753 | Msa0472600:CDS |
| TCCTCCTATGTCCTTTACAC+TGG | 0.471720 | 3_3:-75014095 | Msa0472600:CDS |
| TATTATATGGGGTGGTGCAT+TGG | 0.473668 | 3_3:-75005127 | Msa0472600:three_prime_UTR |
| TATTATATGGGGTGGTGCAT+TGG | 0.473668 | 3_3:-75013421 | Msa0472600:CDS |
| GTTCAATGCTCTTTCAGGAA+TGG | 0.477707 | 3_3:-75014255 | Msa0472600:CDS |
| AGATGTCATAATAGCACCTT+GGG | 0.481690 | 3_3:+75013980 | None:intergenic |
| ATCATTAAAACCAACAATAA+CGG | 0.482912 | 3_3:+75012721 | None:intergenic |
| ACAAATCATCCTTATTGGGT+TGG | 0.488006 | 3_3:-75014300 | Msa0472600:CDS |
| CTTTCAGGAATGGGAGGTGG+TGG | 0.494644 | 3_3:-75005950 | Msa0472600:CDS |
| TTGCTCCTTCAAATAACAAT+GGG | 0.494966 | 3_3:-75003966 | Msa0472600:three_prime_UTR |
| ATGATAGGGTCAATTGGGAT+TGG | 0.495144 | 3_3:-75005228 | Msa0472600:three_prime_UTR |
| ATGATAGGGTCAATTGGGAT+TGG | 0.495144 | 3_3:-75013522 | Msa0472600:CDS |
| GTTCAATGCTCTTTCAGGAA+TGG | 0.495365 | 3_3:-75005960 | Msa0472600:CDS |
| AACATGGGTGGTGTTATTGG+TGG | 0.496677 | 3_3:-75005609 | Msa0472600:CDS |
| AACATGGGTGGTGTTATTGG+TGG | 0.496677 | 3_3:-75013903 | Msa0472600:intron |
| GAAAGAGCATTGAACATGCC+TGG | 0.498347 | 3_3:+75014263 | None:intergenic |
| TCCGATGCCGAGAAGGGCGC+CGG | 0.500028 | 3_3:+75005727 | None:intergenic |
| AAGTGCGGTTAAGGCGTTGT+TGG | 0.502056 | 3_3:+75005907 | None:intergenic |
| ATAAGGATGATTTGTGAAAG+AGG | 0.505507 | 3_3:+75014308 | None:intergenic |
| GAGTGCGGTTAAGGCGTTGT+TGG | 0.510267 | 3_3:+75014202 | None:intergenic |
| TAAGTTCCTTTACGATTCAT+GGG | 0.510847 | 3_3:+75005656 | None:intergenic |
| TAAGTTCCTTTACGATTCAT+GGG | 0.510847 | 3_3:+75013951 | None:intergenic |
| TTCCTTTACGATTCATGGGT+GGG | 0.515970 | 3_3:+75013955 | None:intergenic |
| TATAAAGGAATACAGAGTGC+AGG | 0.516636 | 3_3:-75004150 | Msa0472600:three_prime_UTR |
| CGGCAACTATAGCAAAAGCT+TGG | 0.518114 | 3_3:+75005747 | None:intergenic |
| AGTATGGTTTACTGGTCCAT+TGG | 0.520928 | 3_3:-75004988 | Msa0472600:three_prime_UTR |
| GAAAGAGAACAATGAGGAAG+AGG | 0.525286 | 3_3:-75004007 | Msa0472600:three_prime_UTR |
| GCTCTTTCAGGAATGGGTGG+TGG | 0.525680 | 3_3:-75014248 | Msa0472600:CDS |
| CAAGCTGCTACGGTTAATGA+TGG | 0.526016 | 3_3:-75005549 | Msa0472600:three_prime_UTR |
| AGAGGAAAGAACCAGTGTAA+AGG | 0.529052 | 3_3:+75014084 | None:intergenic |
| TCCGATGCCGAGAACAGCAC+CGG | 0.530799 | 3_3:+75014022 | None:intergenic |
| ATTGGGGAGCACAAATGATA+GGG | 0.533554 | 3_3:-75013536 | Msa0472600:CDS |
| GTCATTAGCTAGAGCTCCAA+TGG | 0.537931 | 3_3:+75004972 | None:intergenic |
| GTTGTTTATGATTGTAGTAG+AGG | 0.539382 | 3_3:+75014066 | None:intergenic |
| ATGACTCTGAAGTTCTTAGC+AGG | 0.541389 | 3_3:-75004954 | Msa0472600:intron |
| ATGACTCTGAAGTTCTTAGC+AGG | 0.541389 | 3_3:-75013248 | Msa0472600:intron |
| GTGCAGGGGCTGCAGTTGCA+TGG | 0.546926 | 3_3:-75004134 | Msa0472600:three_prime_UTR |
| ACCTGCTCCGATGCCGAGAA+GGG | 0.549963 | 3_3:+75005721 | None:intergenic |
| CCGTGGTGATCAAGCTGCTA+CGG | 0.550707 | 3_3:-75005559 | Msa0472600:three_prime_UTR |
| TATAAAGGGATACAAAGTGC+GGG | 0.551438 | 3_3:-75012832 | Msa0472600:CDS |
| GGATATACTAGCATAGTCAA+TGG | 0.552116 | 3_3:+75003938 | None:intergenic |
| TATCCACCCATGAATCGTAA+AGG | 0.557634 | 3_3:-75005662 | Msa0472600:CDS |
| TACCCACCCATGAATCGTAA+AGG | 0.557859 | 3_3:-75013957 | Msa0472600:CDS |
| CAGTTTAGTTTGAGAACAAG+AGG | 0.558289 | 3_3:-75005282 | Msa0472600:three_prime_UTR |
| CAATTTAGTTTGAGAACAAG+AGG | 0.558289 | 3_3:-75013576 | Msa0472600:CDS |
| TGTTCAACGACACCACCCAT+TGG | 0.559220 | 3_3:+75014395 | None:intergenic |
| TCACGAATAACTTTACTAGC+AGG | 0.559403 | 3_3:+75005465 | None:intergenic |
| TCACGAATAACTTTACTAGC+AGG | 0.559403 | 3_3:+75013759 | None:intergenic |
| GACCTGCTCCGATGCCGAGA+AGG | 0.561229 | 3_3:+75005720 | None:intergenic |
| GTTGCTCCTTCAAATAACAA+TGG | 0.563333 | 3_3:-75003967 | Msa0472600:three_prime_UTR |
| ATAAAGGAATACAGAGTGCA+GGG | 0.563470 | 3_3:-75004149 | Msa0472600:three_prime_UTR |
| TTGAACAATGTGTTCTATTG+GGG | 0.569076 | 3_3:-75005258 | Msa0472600:three_prime_UTR |
| GTTCCTTTACGATTCATGGG+TGG | 0.571188 | 3_3:+75013954 | None:intergenic |
| TTACACATACACAGGTACAC+TGG | 0.578312 | 3_3:-75004177 | Msa0472600:intron |
| GTTCTTGGATCTATTATATG+GGG | 0.579371 | 3_3:-75005138 | Msa0472600:three_prime_UTR |
| GTTCTTGGATCTATTATATG+GGG | 0.579371 | 3_3:-75013432 | Msa0472600:CDS |
| AGAACCAGTGTAAAGGACAT+AGG | 0.581796 | 3_3:+75014091 | None:intergenic |
| GCTCTTTCAGGAATGGGAGG+TGG | 0.583306 | 3_3:-75005953 | Msa0472600:CDS |
| CTTGGATCTATTATATGGGG+TGG | 0.589106 | 3_3:-75005135 | Msa0472600:three_prime_UTR |
| CTTGGATCTATTATATGGGG+TGG | 0.589106 | 3_3:-75013429 | Msa0472600:CDS |
| AGAGAACAATGAGGAAGAGG+AGG | 0.591963 | 3_3:-75004004 | Msa0472600:three_prime_UTR |
| AATGCTCTTTCAGGAATGGG+TGG | 0.595210 | 3_3:-75014251 | Msa0472600:CDS |
| AAATTACTAGACCAAGCTGC+AGG | 0.599898 | 3_3:+75013636 | None:intergenic |
| AAGATGTCATAATAGCACCT+TGG | 0.600718 | 3_3:+75013979 | None:intergenic |
| GATTAAACATAAACATGGCA+AGG | 0.600741 | 3_3:-75005097 | Msa0472600:three_prime_UTR |
| GATTAAACATAAACATGGCA+AGG | 0.600741 | 3_3:-75013391 | Msa0472600:CDS |
| AGATTACTAGACCAAGCTGC+AGG | 0.602194 | 3_3:+75005342 | None:intergenic |
| TGAGGTTTCCGGTGGTTGAG+TGG | 0.602501 | 3_3:+75014361 | None:intergenic |
| AGAATCAGCCACTCAACCAC+CGG | 0.603694 | 3_3:-75014369 | Msa0472600:CDS |
| TTTATTCTTAATTACAACCG+TGG | 0.604418 | 3_3:-75005576 | Msa0472600:three_prime_UTR |
| ATTGGGGAGCACAAATGATA+GGG | 0.606614 | 3_3:-75005242 | Msa0472600:three_prime_UTR |
| TCAACTTATGTACTCTACGC+TGG | 0.608201 | 3_3:-75005800 | Msa0472600:CDS |
| GGTGGCATCTACAACATCCT+CGG | 0.616298 | 3_3:-75005851 | Msa0472600:CDS |
| GTGTTTGGTATCCTAGGTGG+TGG | 0.616607 | 3_3:-75005869 | Msa0472600:CDS |
| TAACCATAACGTGTCTCCAA+TGG | 0.617946 | 3_3:-75004103 | Msa0472600:three_prime_UTR |
| GGACTATTATGGAGTGCCCA+AGG | 0.624792 | 3_3:-75013996 | Msa0472600:CDS |
| TTGGACTTACACAGGTACAC+AGG | 0.625881 | 3_3:-75012859 | Msa0472600:intron |
| AGGAATTGTGGGAATTAGTG+TGG | 0.626228 | 3_3:-75005166 | Msa0472600:three_prime_UTR |
| AGGAATTGTGGGAATTAGTG+TGG | 0.626228 | 3_3:-75013460 | Msa0472600:CDS |
| GTTCCTTTACGATTCATGGG+TGG | 0.628209 | 3_3:+75005659 | None:intergenic |
| TGTTGTAGATGCCACCACCT+AGG | 0.637389 | 3_3:+75005858 | None:intergenic |
| AAATGTTGCAACTGAGTGTG+TGG | 0.638201 | 3_3:-75005409 | Msa0472600:three_prime_UTR |
| AAATGTTGCAACTGAGTGTG+TGG | 0.638201 | 3_3:-75013703 | Msa0472600:CDS |
| AATGCTCTTTCAGGAATGGG+AGG | 0.638536 | 3_3:-75005956 | Msa0472600:CDS |
| ATAAAGGGATACAAAGTGCG+GGG | 0.639763 | 3_3:-75012831 | Msa0472600:CDS |
| GGTCTATTATGGGCTGCACA+AGG | 0.640527 | 3_3:-75005701 | Msa0472600:CDS |
| ACCAGTGTAAAGGACATAGG+AGG | 0.645176 | 3_3:+75014094 | None:intergenic |
| TAGGATACCAAACACTGCAA+AGG | 0.650625 | 3_3:+75005877 | None:intergenic |
| GCAGTGTTTGGTATCCTAGG+TGG | 0.651404 | 3_3:-75005872 | Msa0472600:CDS |
| AATTTAGTTTGAGAACAAGA+GGG | 0.657205 | 3_3:-75013575 | Msa0472600:CDS |
| AATCAGATTAAACATAAACA+TGG | 0.664350 | 3_3:-75005102 | Msa0472600:three_prime_UTR |
| AATCAGATTAAACATAAACA+TGG | 0.664350 | 3_3:-75013396 | Msa0472600:CDS |
| AGTTTAGTTTGAGAACAAGA+GGG | 0.664873 | 3_3:-75005281 | Msa0472600:three_prime_UTR |
| GGCTGTGAAAGAGAACAATG+AGG | 0.665070 | 3_3:-75004013 | Msa0472600:three_prime_UTR |
| CTATAAAGGGATACAAAGTG+CGG | 0.672233 | 3_3:-75012833 | Msa0472600:CDS |
| GTAAACCATACTCTGAAACA+TGG | 0.672850 | 3_3:+75013293 | None:intergenic |
| TGCAAAGGTTGTGTAAAGTG+CGG | 0.675637 | 3_3:+75005892 | None:intergenic |
| CCGTAGCAGCTTGATCACCA+CGG | 0.690669 | 3_3:+75005559 | None:intergenic |
| TAAAGGGATACAAAGTGCGG+GGG | 0.692575 | 3_3:-75012830 | Msa0472600:CDS |
| TAAAGGAATACAGAGTGCAG+GGG | 0.705125 | 3_3:-75004148 | Msa0472600:three_prime_UTR |
| CCTGCGAAAAGAGTTAAGTG+AGG | 0.734855 | 3_3:+75005827 | None:intergenic |
| AAAGAGTTAAGTGAGGTCCG+AGG | 0.738397 | 3_3:+75005834 | None:intergenic |
| TGTGAAGCTTGTGTAGAGTG+CGG | 0.751066 | 3_3:+75014187 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTTTGTAAATAATATAA+TGG | - | chr3_3:75005636-75005655 | Msa0472600:CDS | 10.0% |
| !!! | AATTAATTTTATTGTGTTAT+TGG | - | chr3_3:75005991-75006010 | Msa0472600:intron | 10.0% |
| !!! | ATACATTTTTTTTTCATAAT+AGG | + | chr3_3:75008936-75008955 | None:intergenic | 10.0% |
| !!! | AAATTTTTGTCAATATTTTT+TGG | + | chr3_3:75009018-75009037 | None:intergenic | 10.0% |
| !! | TAAAACTGTAAATATTTATA+CGG | + | chr3_3:75009467-75009486 | None:intergenic | 10.0% |
| !!! | AAATGTGATTTTATTTTATA+GGG | + | chr3_3:75009498-75009517 | None:intergenic | 10.0% |
| !!! | AAAATGTGATTTTATTTTAT+AGG | + | chr3_3:75009499-75009518 | None:intergenic | 10.0% |
| !!! | TTTTTTCTATCTTAATTATT+TGG | - | chr3_3:75009771-75009790 | Msa0472600:intron | 10.0% |
| !!! | ATATTTTTTTGTTATATTGT+TGG | - | chr3_3:75010079-75010098 | Msa0472600:intron | 10.0% |
| !! | ATTGAAACTAAAAATATAAA+TGG | + | chr3_3:75010162-75010181 | None:intergenic | 10.0% |
| !! | TTCTATAATAATCTTATATT+AGG | - | chr3_3:75010595-75010614 | Msa0472600:intron | 10.0% |
| !! | ATAAAATGATATAATATCTT+TGG | + | chr3_3:75011031-75011050 | None:intergenic | 10.0% |
| !! | TTATGTTATAATAACATATA+TGG | + | chr3_3:75011164-75011183 | None:intergenic | 10.0% |
| !! | TACTATGTTAATAAAAAAAT+TGG | - | chr3_3:75011261-75011280 | Msa0472600:intron | 10.0% |
| !! | TTAATATGATATATGAAATT+TGG | - | chr3_3:75013990-75014009 | Msa0472600:CDS | 10.0% |
| !! | AAAGAAAAATACAAAACAAA+AGG | + | chr3_3:75004896-75004915 | None:intergenic | 15.0% |
| !!! | TTTGTTTTGTATTTTTCTTT+TGG | - | chr3_3:75004896-75004915 | Msa0472600:intron | 15.0% |
| !!! | TTGTTTTGTATTTTTCTTTT+GGG | - | chr3_3:75004897-75004916 | Msa0472600:intron | 15.0% |
| !!! | TTTGTAAATAATATAATGGA+TGG | - | chr3_3:75005640-75005659 | Msa0472600:CDS | 15.0% |
| !!! | TTGTAAATAATATAATGGAT+GGG | - | chr3_3:75005641-75005660 | Msa0472600:CDS | 15.0% |
| !! | ATAAATTGTTTGTCTAATTT+AGG | - | chr3_3:75006175-75006194 | Msa0472600:intron | 15.0% |
| !!! | ACACATATACAAATTAATTT+TGG | + | chr3_3:75006318-75006337 | None:intergenic | 15.0% |
| !! | TGTGAATTAGTAAAAAAATA+TGG | + | chr3_3:75007394-75007413 | None:intergenic | 15.0% |
| !!! | ATAATGTATTTCATTTTACA+CGG | - | chr3_3:75008501-75008520 | Msa0472600:intron | 15.0% |
| !!! | TTTTACTAAAATAGTAGAAA+AGG | + | chr3_3:75008695-75008714 | None:intergenic | 15.0% |
| !!! | ATGATATGTAGTTTTTATTT+AGG | + | chr3_3:75008967-75008986 | None:intergenic | 15.0% |
| !!! | CCATTTTTATTTTTATTTTG+AGG | + | chr3_3:75009065-75009084 | None:intergenic | 15.0% |
| !! | CCTCAAAATAAAAATAAAAA+TGG | - | chr3_3:75009062-75009081 | Msa0472600:intron | 15.0% |
| !!! | CTTTGAATATTGTTTTTAAA+AGG | - | chr3_3:75009285-75009304 | Msa0472600:intron | 15.0% |
| !! | GAATTATTATAGTTAGAAAA+GGG | - | chr3_3:75009320-75009339 | Msa0472600:intron | 15.0% |
| !!! | TGTTGATGTAAAAATTTTAT+AGG | - | chr3_3:75009595-75009614 | Msa0472600:intron | 15.0% |
| !!! | GTTGATGTAAAAATTTTATA+GGG | - | chr3_3:75009596-75009615 | Msa0472600:intron | 15.0% |
| !!! | TAATAATTTGTCAAAATTGA+TGG | - | chr3_3:75011181-75011200 | Msa0472600:intron | 15.0% |
| !! | AATAAAAAAATTGGAACTAA+TGG | - | chr3_3:75011270-75011289 | Msa0472600:intron | 15.0% |
| !!! | AACAATTTTTTTTTTTTCAG+TGG | + | chr3_3:75011527-75011546 | None:intergenic | 15.0% |
| !! | AAAGAAAAATACAAAACAAA+AGG | + | chr3_3:75004896-75004915 | None:intergenic | 15.0% |
| !!! | TTTGTTTTGTATTTTTCTTT+TGG | - | chr3_3:75004896-75004915 | Msa0472600:intron | 15.0% |
| !!! | TTGTTTTGTATTTTTCTTTT+GGG | - | chr3_3:75004897-75004916 | Msa0472600:intron | 15.0% |
| !! | AGTTAAAAATATATTTCAAG+TGG | + | chr3_3:75013442-75013461 | None:intergenic | 15.0% |
| !!! | TTTAGTATTTGTTAACAAAA+AGG | - | chr3_3:75013603-75013622 | Msa0472600:intron | 15.0% |
| !!! | TTAGTATTTGTTAACAAAAA+GGG | - | chr3_3:75013604-75013623 | Msa0472600:intron | 15.0% |
| !!! | TGTTAATAAATATTTAGAGT+AGG | - | chr3_3:75013714-75013733 | Msa0472600:CDS | 15.0% |
| !!! | GTTAATAAATATTTAGAGTA+GGG | - | chr3_3:75013715-75013734 | Msa0472600:CDS | 15.0% |
| !! | TAAAAAATCAAAGAATCATT+TGG | - | chr3_3:75014317-75014336 | Msa0472600:CDS | 15.0% |
| !! | CGATTGTAATTAAGAATAAA+AGG | + | chr3_3:75004353-75004372 | None:intergenic | 20.0% |
| !! | TTTATTCTTAATTACAATCG+TGG | - | chr3_3:75004353-75004372 | Msa0472600:intron | 20.0% |
| !! | TTCTTAAATTGTTCTACAAT+TGG | - | chr3_3:75004546-75004565 | Msa0472600:intron | 20.0% |
| !! | AATCAGATTAAACATAAACA+TGG | - | chr3_3:75004827-75004846 | Msa0472600:intron | 20.0% |
| !! | AGAAACTTCAAGAAAATATT+TGG | - | chr3_3:75005149-75005168 | Msa0472600:three_prime_UTR | 20.0% |
| !! | AATAATCCACAAAAAAATAC+TGG | + | chr3_3:75005215-75005234 | None:intergenic | 20.0% |
| !!! | TAATTTGTAGTTTTAGTGAT+TGG | - | chr3_3:75005272-75005291 | Msa0472600:three_prime_UTR | 20.0% |
| !! | ATCATTAAAACCAACAATAA+CGG | + | chr3_3:75005505-75005524 | None:intergenic | 20.0% |
| !!! | ATTGTTGGTTTTAATGATTT+TGG | - | chr3_3:75005507-75005526 | Msa0472600:three_prime_UTR | 20.0% |
| !! | TACTTTCTTAGATGATATAT+AGG | - | chr3_3:75005741-75005760 | Msa0472600:CDS | 20.0% |
| !! | AGCAACTTAACATTATATTT+GGG | + | chr3_3:75006031-75006050 | None:intergenic | 20.0% |
| !! | AAGCAACTTAACATTATATT+TGG | + | chr3_3:75006032-75006051 | None:intergenic | 20.0% |
| !! | CTCTTGTATTTATACTTTAT+AGG | + | chr3_3:75006075-75006094 | None:intergenic | 20.0% |
| !!! | ATATGTTGTTTGAATAGTTT+AGG | - | chr3_3:75006265-75006284 | Msa0472600:intron | 20.0% |
| !! | TTAAAAACCCATAAAGATAA+AGG | + | chr3_3:75006638-75006657 | None:intergenic | 20.0% |
| !! | TATAACTATAAGTAACATAG+GGG | + | chr3_3:75006724-75006743 | None:intergenic | 20.0% |
| !! | CTATAACTATAAGTAACATA+GGG | + | chr3_3:75006725-75006744 | None:intergenic | 20.0% |
| !! | ATATTTGATATTTCATTCGA+TGG | - | chr3_3:75006805-75006824 | Msa0472600:intron | 20.0% |
| !! | AAGTATGTATATTGTCAAAT+AGG | + | chr3_3:75007362-75007381 | None:intergenic | 20.0% |
| !! | TGTTCTAATCTGTATAAATA+TGG | - | chr3_3:75007851-75007870 | Msa0472600:intron | 20.0% |
| !!! | AGATTTTTTCATAATAAGGA+GGG | + | chr3_3:75008057-75008076 | None:intergenic | 20.0% |
| !!! | AAGATTTTTTCATAATAAGG+AGG | + | chr3_3:75008058-75008077 | None:intergenic | 20.0% |
| !!! | CAGAAGATTTTTTCATAATA+AGG | + | chr3_3:75008061-75008080 | None:intergenic | 20.0% |
| !!! | ATTTTCCTTCATGAATTATT+AGG | - | chr3_3:75008355-75008374 | Msa0472600:intron | 20.0% |
| !! | TAAAGAATCTTTCTGTATAT+TGG | + | chr3_3:75008469-75008488 | None:intergenic | 20.0% |
| !!! | TAATGTATTTCATTTTACAC+GGG | - | chr3_3:75008502-75008521 | Msa0472600:intron | 20.0% |
| !! | ATATAACAAAGCTAATTAAG+CGG | + | chr3_3:75008593-75008612 | None:intergenic | 20.0% |
| !! | GTTTAATCAATTCAATCATA+CGG | + | chr3_3:75008872-75008891 | None:intergenic | 20.0% |
| !! | AAAAATTTGTAACTTCACAA+TGG | - | chr3_3:75009030-75009049 | Msa0472600:intron | 20.0% |
| !! | AACAATATTCAAAGATTAGT+GGG | + | chr3_3:75009279-75009298 | None:intergenic | 20.0% |
| !! | AAACAATATTCAAAGATTAG+TGG | + | chr3_3:75009280-75009299 | None:intergenic | 20.0% |
| !!! | TTTTAAAAGGCAATATAAGT+TGG | - | chr3_3:75009298-75009317 | Msa0472600:intron | 20.0% |
| !! | GGAATTATTATAGTTAGAAA+AGG | - | chr3_3:75009319-75009338 | Msa0472600:intron | 20.0% |
| !!! | ATCCTGATGAAAAATTTTAT+AGG | - | chr3_3:75009626-75009645 | Msa0472600:intron | 20.0% |
| !!! | TCCTGATGAAAAATTTTATA+GGG | - | chr3_3:75009627-75009646 | Msa0472600:intron | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | - | chr3_3:75009655-75009674 | Msa0472600:intron | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | - | chr3_3:75009656-75009675 | Msa0472600:intron | 20.0% |
| !! | CAAAATTCTGAATATTTACA+TGG | - | chr3_3:75009687-75009706 | Msa0472600:intron | 20.0% |
| !! | ATTAGGGTTAATTAAGTAAA+TGG | + | chr3_3:75009714-75009733 | None:intergenic | 20.0% |
| !! | TAACAAATAATCATATTTCG+AGG | - | chr3_3:75009828-75009847 | Msa0472600:intron | 20.0% |
| !!! | TTATGTAGTTGTATGTTTTT+TGG | - | chr3_3:75009904-75009923 | Msa0472600:intron | 20.0% |
| !! | ATAACTACATAATATATGCA+AGG | + | chr3_3:75009955-75009974 | None:intergenic | 20.0% |
| !! | GTCATTGAAATAGATAATTA+TGG | - | chr3_3:75010103-75010122 | Msa0472600:intron | 20.0% |
| !!! | ATAGATAATTATGGTTAGTT+TGG | - | chr3_3:75010112-75010131 | Msa0472600:intron | 20.0% |
| !! | TAAAGCCTTAACTTTATTAA+AGG | - | chr3_3:75010245-75010264 | Msa0472600:intron | 20.0% |
| !! | ATAAGATTATTATAGAACAC+AGG | + | chr3_3:75010592-75010611 | None:intergenic | 20.0% |
| !!! | ATAACATAATCTTAGTTCTT+AGG | + | chr3_3:75010679-75010698 | None:intergenic | 20.0% |
| !!! | TAATATCTTTGGAAGATTTT+CGG | + | chr3_3:75011020-75011039 | None:intergenic | 20.0% |
| !! | TGTTATAATAACATATATGG+TGG | + | chr3_3:75011161-75011180 | None:intergenic | 20.0% |
| !! | ATATGTAGTTTATAGTTTGA+AGG | - | chr3_3:75011314-75011333 | Msa0472600:intron | 20.0% |
| !!! | TTTTGAGTAATATTGTTTGA+AGG | - | chr3_3:75011346-75011365 | Msa0472600:intron | 20.0% |
| !!! | TTTACTCTTCATTTTACTTT+TGG | + | chr3_3:75011646-75011665 | None:intergenic | 20.0% |
| !! | GTTGTTTATGATTATAGTAA+AGG | + | chr3_3:75012455-75012474 | None:intergenic | 20.0% |
| !! | TTCTTAAATTGTTCTACAAT+TGG | - | chr3_3:75004546-75004565 | Msa0472600:intron | 20.0% |
| !! | TCTTATTAACATGATTAAAC+TGG | + | chr3_3:75004625-75004644 | None:intergenic | 20.0% |
| !! | AATCAGATTAAACATAAACA+TGG | - | chr3_3:75004827-75004846 | Msa0472600:intron | 20.0% |
| !! | AAAAAGTAACTCAAAACAAA+TGG | + | chr3_3:75013355-75013374 | None:intergenic | 20.0% |
| !! | GTATGATAATAGTTGAAATT+TGG | - | chr3_3:75013816-75013835 | Msa0472600:intron | 20.0% |
| !!! | TGATGATGATAATTGAAATT+TGG | - | chr3_3:75013898-75013917 | Msa0472600:intron | 20.0% |
| !! | CTAAAAATACAAATTAGTGT+TGG | + | chr3_3:75013937-75013956 | None:intergenic | 20.0% |
| !!! | TCTTTGATTTTTTAATCCAA+GGG | + | chr3_3:75014311-75014330 | None:intergenic | 20.0% |
| !!! | TTCTTTGATTTTTTAATCCA+AGG | + | chr3_3:75014312-75014331 | None:intergenic | 20.0% |
| ! | TTTCACAAATCATCCTTATT+GGG | - | chr3_3:75003919-75003938 | Msa0472600:three_prime_UTR | 25.0% |
| !! | GAACTTACATTTCAATTTTC+TGG | - | chr3_3:75004288-75004307 | Msa0472600:intron | 25.0% |
| !! | GTTAATGATGGAACTTATAT+AGG | - | chr3_3:75004392-75004411 | Msa0472600:intron | 25.0% |
| !!! | AATTTAGTTTGAGAACAAGA+GGG | - | chr3_3:75004648-75004667 | Msa0472600:intron | 25.0% |
| !!! | GTTGAACAATGTGTTTTATT+GGG | - | chr3_3:75004670-75004689 | Msa0472600:intron | 25.0% |
| !!! | TTGAACAATGTGTTTTATTG+GGG | - | chr3_3:75004671-75004690 | Msa0472600:intron | 25.0% |
| ! | TTTAAGAGTAGAAAGAAAAG+AGG | - | chr3_3:75004743-75004762 | Msa0472600:intron | 25.0% |
| ! | TGTTCTTGGATCTATTATAT+GGG | - | chr3_3:75004790-75004809 | Msa0472600:intron | 25.0% |
| ! | TTAACTATTCCATTTGTTCT+TGG | - | chr3_3:75005034-75005053 | Msa0472600:three_prime_UTR | 25.0% |
| !!! | TATCAACCAGTATTTTTTTG+TGG | - | chr3_3:75005206-75005225 | Msa0472600:three_prime_UTR | 25.0% |
| ! | TTTCCAAATTTCAACTATCA+GGG | + | chr3_3:75005315-75005334 | None:intergenic | 25.0% |
| ! | ATTTCCAAATTTCAACTATC+AGG | + | chr3_3:75005316-75005335 | None:intergenic | 25.0% |
| !!! | AATAATATAATGGATGGGTA+AGG | - | chr3_3:75005646-75005665 | Msa0472600:CDS | 25.0% |
| ! | TGATGTTTCGATTAAAAGAT+AGG | + | chr3_3:75006125-75006144 | None:intergenic | 25.0% |
| ! | TTTGATGTTCAGATACATTA+AGG | - | chr3_3:75006223-75006242 | Msa0472600:intron | 25.0% |
| ! | ATGTTGTACCTTTATCTTTA+TGG | - | chr3_3:75006627-75006646 | Msa0472600:intron | 25.0% |
| ! | TGTTGTACCTTTATCTTTAT+GGG | - | chr3_3:75006628-75006647 | Msa0472600:intron | 25.0% |
| ! | ATAACTATAAGTAACATAGG+GGG | + | chr3_3:75006723-75006742 | None:intergenic | 25.0% |
| ! | GCTATAACTATAAGTAACAT+AGG | + | chr3_3:75006726-75006745 | None:intergenic | 25.0% |
| ! | TAACTCACTTTATTAAGATC+TGG | + | chr3_3:75006755-75006774 | None:intergenic | 25.0% |
| ! | TGATTTAGTACAATATGTGT+CGG | - | chr3_3:75006899-75006918 | Msa0472600:intron | 25.0% |
| !!! | GTGTTACATAAATTTTAGGT+GGG | - | chr3_3:75006944-75006963 | Msa0472600:intron | 25.0% |
| !!! | TGTTACATAAATTTTAGGTG+GGG | - | chr3_3:75006945-75006964 | Msa0472600:intron | 25.0% |
| ! | AATGCTTAGTTTCAGTTTAT+TGG | + | chr3_3:75006992-75007011 | None:intergenic | 25.0% |
| !!! | AATGTTTTTTTTCTTCAGCT+TGG | - | chr3_3:75007012-75007031 | Msa0472600:intron | 25.0% |
| !!! | ATGTTTTTTTTCTTCAGCTT+GGG | - | chr3_3:75007013-75007032 | Msa0472600:intron | 25.0% |
| !!! | ATTTGTTTTTAGTCAGCTTT+TGG | - | chr3_3:75007173-75007192 | Msa0472600:intron | 25.0% |
| !! | TGGATTTTATCAACGTTATT+AGG | - | chr3_3:75007193-75007212 | Msa0472600:intron | 25.0% |
| ! | CAAAGATAAAACATATGCAT+TGG | - | chr3_3:75007505-75007524 | Msa0472600:intron | 25.0% |
| ! | ATCAATTAGGTCATCTAATA+TGG | - | chr3_3:75007541-75007560 | Msa0472600:intron | 25.0% |
| ! | AATCTTAAAAGTCTTAACAG+AGG | + | chr3_3:75007782-75007801 | None:intergenic | 25.0% |
| !!! | AAGCACTTTTATTTATTGCA+AGG | - | chr3_3:75007997-75008016 | Msa0472600:intron | 25.0% |
| !! | TAATATTCTTTTCATTACGC+AGG | - | chr3_3:75008280-75008299 | Msa0472600:intron | 25.0% |
| !! | ATCAACACTTTTCTTTTGTA+TGG | + | chr3_3:75008404-75008423 | None:intergenic | 25.0% |
| ! | ATACAAATGATCAAGTCATT+CGG | + | chr3_3:75008894-75008913 | None:intergenic | 25.0% |
| ! | AAAAAAGTTCAAGTCACTTA+AGG | + | chr3_3:75009173-75009192 | None:intergenic | 25.0% |
| ! | ATATGTATGACAATGATTGA+TGG | - | chr3_3:75009230-75009249 | Msa0472600:intron | 25.0% |
| !! | ACATTTTCCTTAAGCATTTT+AGG | - | chr3_3:75009532-75009551 | Msa0472600:intron | 25.0% |
| !! | CATTTTCCTTAAGCATTTTA+GGG | - | chr3_3:75009533-75009552 | Msa0472600:intron | 25.0% |
| !! | CCTGATGAAAAATTTTATAG+GGG | - | chr3_3:75009628-75009647 | Msa0472600:intron | 25.0% |
| ! | AACCCTAATTATAAATTCTC+CGG | - | chr3_3:75009725-75009744 | Msa0472600:intron | 25.0% |
| ! | AACCGGAGAATTTATAATTA+GGG | + | chr3_3:75009730-75009749 | None:intergenic | 25.0% |
| ! | TAACCGGAGAATTTATAATT+AGG | + | chr3_3:75009731-75009750 | None:intergenic | 25.0% |
| ! | CAACTCCTTTAATAAAGTTA+AGG | + | chr3_3:75010253-75010272 | None:intergenic | 25.0% |
| ! | CTTAACTTTATTAAAGGAGT+TGG | - | chr3_3:75010251-75010270 | Msa0472600:intron | 25.0% |
| ! | AGAAAACGAAAGTTAATCTT+AGG | + | chr3_3:75010518-75010537 | None:intergenic | 25.0% |
| ! | ATAGATCGATAGTTAGTATT+TGG | + | chr3_3:75010713-75010732 | None:intergenic | 25.0% |
| !! | TAATAACATATATGGTGGAA+AGG | + | chr3_3:75011156-75011175 | None:intergenic | 25.0% |
| ! | AATTATCTAACTTCCTACAA+TGG | - | chr3_3:75011485-75011504 | Msa0472600:intron | 25.0% |
| ! | ATTATCTAACTTCCTACAAT+GGG | - | chr3_3:75011486-75011505 | Msa0472600:intron | 25.0% |
| ! | TAAAATACATGTGTTGTGTA+TGG | + | chr3_3:75011598-75011617 | None:intergenic | 25.0% |
| !! | ATACACAACACATGTATTTT+AGG | - | chr3_3:75011597-75011616 | Msa0472600:intron | 25.0% |
| !! | TTAGGTACTATTACAACTTT+TGG | - | chr3_3:75011615-75011634 | Msa0472600:intron | 25.0% |
| !! | CAATGTTGATGAAGAAAAAA+AGG | + | chr3_3:75011751-75011770 | None:intergenic | 25.0% |
| ! | TATCTACAATGAGACAAATT+TGG | + | chr3_3:75011971-75011990 | None:intergenic | 25.0% |
| ! | GAATGAAATGGAATGATTTA+TGG | + | chr3_3:75012057-75012076 | None:intergenic | 25.0% |
| ! | AAAAACAAACTAAGCCAATA+AGG | + | chr3_3:75012230-75012249 | None:intergenic | 25.0% |
| !! | GGAACTTACATTTCAATTTT+TGG | - | chr3_3:75004287-75004306 | Msa0472600:intron | 25.0% |
| !!! | TTTTTGGAGTATTTTCAACA+TGG | - | chr3_3:75012598-75012617 | Msa0472600:intron | 25.0% |
| !!! | TTTTGGAGTATTTTCAACAT+GGG | - | chr3_3:75012599-75012618 | Msa0472600:intron | 25.0% |
| ! | CGGTTGTAATTAAGAATAAA+AGG | + | chr3_3:75012647-75012666 | None:intergenic | 25.0% |
| ! | TTTATTCTTAATTACAACCG+TGG | - | chr3_3:75012647-75012666 | Msa0472600:intron | 25.0% |
| !! | GTTAATGATGGAACTTATAT+AGG | - | chr3_3:75004392-75004411 | Msa0472600:intron | 25.0% |
| ! | TTTAAGAGTAGAAAGAAAAG+AGG | - | chr3_3:75004743-75004762 | Msa0472600:intron | 25.0% |
| ! | TGTTCTTGGATCTATTATAT+GGG | - | chr3_3:75004790-75004809 | Msa0472600:intron | 25.0% |
| !! | GTCTATTTCTTGTCAAAATT+TGG | - | chr3_3:75013737-75013756 | Msa0472600:CDS | 25.0% |
| ! | TTAGTGATTAGAATTTCTTG+TGG | - | chr3_3:75013792-75013811 | Msa0472600:CDS | 25.0% |
| ! | ACCATCAAAACTAACAATAA+GGG | + | chr3_3:75014187-75014206 | None:intergenic | 25.0% |
| ! | AACCATCAAAACTAACAATA+AGG | + | chr3_3:75014188-75014207 | None:intergenic | 25.0% |
| !!! | ATTGTTAGTTTTGATGGTTT+TGG | - | chr3_3:75014189-75014208 | Msa0472600:CDS | 25.0% |
| !!! | TTTGATTTTTTAATCCAAGG+GGG | + | chr3_3:75014309-75014328 | None:intergenic | 25.0% |
| !!! | CTTTGATTTTTTAATCCAAG+GGG | + | chr3_3:75014310-75014329 | None:intergenic | 25.0% |
| ! | AAGAAGTGATGAAGTTTTTG+AGG | + | chr3_3:75003883-75003902 | None:intergenic | 30.0% |
| ! | ATAAGGATGATTTGTGAAAG+AGG | + | chr3_3:75003918-75003937 | None:intergenic | 30.0% |
| CTTTCACAAATCATCCTTAT+TGG | - | chr3_3:75003918-75003937 | Msa0472600:three_prime_UTR | 30.0% | |
| AAAAACAAACCAACCCAATA+AGG | + | chr3_3:75003935-75003954 | None:intergenic | 30.0% | |
| ! | TACACAAGCTTCACAATTTT+CGG | - | chr3_3:75004044-75004063 | Msa0472600:three_prime_UTR | 30.0% |
| GTTGTTTATGATTGTAGTAG+AGG | + | chr3_3:75004160-75004179 | None:intergenic | 30.0% | |
| TAAGTTCCTTTACGATTCAT+GGG | + | chr3_3:75004275-75004294 | None:intergenic | 30.0% | |
| !!! | TTTCTGGAGTATTTTCAACA+TGG | - | chr3_3:75004304-75004323 | Msa0472600:intron | 30.0% |
| !!! | TTCTGGAGTATTTTCAACAT+GGG | - | chr3_3:75004305-75004324 | Msa0472600:intron | 30.0% |
| TGGAACTTATATAGGTTTCA+TGG | - | chr3_3:75004400-75004419 | Msa0472600:intron | 30.0% | |
| AGTAAAGTTATTCGTGATGA+TGG | - | chr3_3:75004470-75004489 | Msa0472600:intron | 30.0% | |
| !! | CAATTTAGTTTGAGAACAAG+AGG | - | chr3_3:75004647-75004666 | Msa0472600:intron | 30.0% |
| ! | GGTTGAACAATGTGTTTTAT+TGG | - | chr3_3:75004669-75004688 | Msa0472600:intron | 30.0% |
| TAGAAAGAAAAGAGGAATTG+TGG | - | chr3_3:75004751-75004770 | Msa0472600:intron | 30.0% | |
| AGAAAGAAAAGAGGAATTGT+GGG | - | chr3_3:75004752-75004771 | Msa0472600:intron | 30.0% | |
| CTGTTCTTGGATCTATTATA+TGG | - | chr3_3:75004789-75004808 | Msa0472600:intron | 30.0% | |
| GTTCTTGGATCTATTATATG+GGG | - | chr3_3:75004791-75004810 | Msa0472600:intron | 30.0% | |
| GATTAAACATAAACATGGCA+AGG | - | chr3_3:75004832-75004851 | Msa0472600:intron | 30.0% | |
| AAAATGCAACCAAGAACAAA+TGG | + | chr3_3:75005046-75005065 | None:intergenic | 30.0% | |
| TTAGTGATTGGCATTTCATT+TGG | - | chr3_3:75005284-75005303 | Msa0472600:three_prime_UTR | 30.0% | |
| TATCCCTGATAGTTGAAATT+TGG | - | chr3_3:75005309-75005328 | Msa0472600:three_prime_UTR | 30.0% | |
| !!! | AATGATTTTGGTTGTGAAAG+AGG | - | chr3_3:75005519-75005538 | Msa0472600:three_prime_UTR | 30.0% |
| AGGTGATTTAGCATGTTTAA+AGG | + | chr3_3:75005694-75005713 | None:intergenic | 30.0% | |
| ! | ACCTAAACTAGACAATTTTG+TGG | - | chr3_3:75005710-75005729 | Msa0472600:CDS | 30.0% |
| ! | ACCACAAAATTGTCTAGTTT+AGG | + | chr3_3:75005714-75005733 | None:intergenic | 30.0% |
| AAGGGATGAAGAAAATCAAA+AGG | - | chr3_3:75005816-75005835 | Msa0472600:CDS | 30.0% | |
| ! | ATTGTGTTATTGGAGATCAT+TGG | - | chr3_3:75006001-75006020 | Msa0472600:intron | 30.0% |
| !! | TTGTTGCAATTTTGATGTTG+CGG | + | chr3_3:75006451-75006470 | None:intergenic | 30.0% |
| CATCAAAATTGCAACAACAA+TGG | - | chr3_3:75006454-75006473 | Msa0472600:intron | 30.0% | |
| ATTGAAGTAAATCAGTGCAT+TGG | + | chr3_3:75006697-75006716 | None:intergenic | 30.0% | |
| !! | ATTTCATTCGATGGTGTTAT+AGG | - | chr3_3:75006814-75006833 | Msa0472600:intron | 30.0% |
| !!! | GTCGGTGTTACATAAATTTT+AGG | - | chr3_3:75006940-75006959 | Msa0472600:intron | 30.0% |
| !! | GGTGTTACATAAATTTTAGG+TGG | - | chr3_3:75006943-75006962 | Msa0472600:intron | 30.0% |
| !! | GTTACATAAATTTTAGGTGG+GGG | - | chr3_3:75006946-75006965 | Msa0472600:intron | 30.0% |
| TTTCAGTTTATTGGAGTTCT+GGG | + | chr3_3:75006983-75007002 | None:intergenic | 30.0% | |
| !!! | TGTTTTTTTTCTTCAGCTTG+GGG | - | chr3_3:75007014-75007033 | Msa0472600:intron | 30.0% |
| GTATACACACCTTCATATTT+GGG | + | chr3_3:75007100-75007119 | None:intergenic | 30.0% | |
| AGTATACACACCTTCATATT+TGG | + | chr3_3:75007101-75007120 | None:intergenic | 30.0% | |
| CTCACAGAACTAAATTGAAA+AGG | + | chr3_3:75007145-75007164 | None:intergenic | 30.0% | |
| TCAAATAGGTCATCTATTGA+GGG | + | chr3_3:75007348-75007367 | None:intergenic | 30.0% | |
| TTAGGTCATCTAATATGGAA+CGG | - | chr3_3:75007546-75007565 | Msa0472600:intron | 30.0% | |
| AAACAGGTACAATCAATATG+TGG | + | chr3_3:75007630-75007649 | None:intergenic | 30.0% | |
| ATGGAGATGACAATAAAAAC+AGG | + | chr3_3:75007646-75007665 | None:intergenic | 30.0% | |
| !! | ACAAAAGTGTCATATGAAGA+TGG | + | chr3_3:75007665-75007684 | None:intergenic | 30.0% |
| CCTACATGATTATAGCTTAA+TGG | + | chr3_3:75008084-75008103 | None:intergenic | 30.0% | |
| CCATTAAGCTATAATCATGT+AGG | - | chr3_3:75008081-75008100 | Msa0472600:intron | 30.0% | |
| TGAGAAAAAAATCGTTGTGA+TGG | - | chr3_3:75008131-75008150 | Msa0472600:intron | 30.0% | |
| TTCAACGTTGACAACAAATT+TGG | - | chr3_3:75008308-75008327 | Msa0472600:intron | 30.0% | |
| CTGTTCCTAATAATTCATGA+AGG | + | chr3_3:75008363-75008382 | None:intergenic | 30.0% | |
| ! | AACCAAAACAAAAAGCATAC+TGG | + | chr3_3:75008435-75008454 | None:intergenic | 30.0% |
| !!! | GTATTTTGGCATTTTTGATG+TGG | - | chr3_3:75008564-75008583 | Msa0472600:intron | 30.0% |
| CCTGAAAAGAAAATTAGTCA+AGG | + | chr3_3:75008618-75008637 | None:intergenic | 30.0% | |
| ! | CCTTGACTAATTTTCTTTTC+AGG | - | chr3_3:75008615-75008634 | Msa0472600:intron | 30.0% |
| !!! | GAGACATCTGTTTGTTTTTT+TGG | + | chr3_3:75008673-75008692 | None:intergenic | 30.0% |
| CGGTTTGATCAATAATTCAA+CGG | + | chr3_3:75008852-75008871 | None:intergenic | 30.0% | |
| GCAAAATAAATGTCAACCAT+TGG | - | chr3_3:75009207-75009226 | Msa0472600:intron | 30.0% | |
| TCATTGTCATACATATCCAA+TGG | + | chr3_3:75009226-75009245 | None:intergenic | 30.0% | |
| ! | TTTTGTCCCTAAAATGCTTA+AGG | + | chr3_3:75009542-75009561 | None:intergenic | 30.0% |
| TTTAGGGACAAAAATGTTGA+TGG | - | chr3_3:75009549-75009568 | Msa0472600:intron | 30.0% | |
| !! | TGTTGATGGAAATTTTTGAC+AGG | - | chr3_3:75009563-75009582 | Msa0472600:intron | 30.0% |
| !! | GTTGATGGAAATTTTTGACA+GGG | - | chr3_3:75009564-75009583 | Msa0472600:intron | 30.0% |
| ! | CCCCTATAAAATTTTTCATC+AGG | + | chr3_3:75009631-75009650 | None:intergenic | 30.0% |
| ! | CATTTTCGTTGAACATTAAC+CGG | + | chr3_3:75009747-75009766 | None:intergenic | 30.0% |
| CACACTTGAAAAGTTATGAA+CGG | + | chr3_3:75010211-75010230 | None:intergenic | 30.0% | |
| CTTTATCAAAATCTGAACTC+TGG | - | chr3_3:75010397-75010416 | Msa0472600:intron | 30.0% | |
| ATCGATAGTTAGTATTTGGA+AGG | + | chr3_3:75010709-75010728 | None:intergenic | 30.0% | |
| ! | AGTCTTTAGAAGATTCACAT+AGG | + | chr3_3:75010985-75011004 | None:intergenic | 30.0% |
| ! | TTTGGAAGATTTTCGGATAA+TGG | + | chr3_3:75011013-75011032 | None:intergenic | 30.0% |
| ! | TGAAGGATGTTGATTATATG+TGG | - | chr3_3:75011363-75011382 | Msa0472600:intron | 30.0% |
| TTGTTGCTACCAATATTACA+AGG | + | chr3_3:75011433-75011452 | None:intergenic | 30.0% | |
| AAAAAATTGTTCCTCTCCTA+TGG | - | chr3_3:75011536-75011555 | Msa0472600:intron | 30.0% | |
| GAGTAAAATAGAAATGTGCA+CGG | - | chr3_3:75011659-75011678 | Msa0472600:intron | 30.0% | |
| AGTAAAATAGAAATGTGCAC+GGG | - | chr3_3:75011660-75011679 | Msa0472600:intron | 30.0% | |
| CAAAGATGAAACGATAAGTT+GGG | + | chr3_3:75011700-75011719 | None:intergenic | 30.0% | |
| ACAAAGATGAAACGATAAGT+TGG | + | chr3_3:75011701-75011720 | None:intergenic | 30.0% | |
| AGGAGATGAAAGTTAAAACT+TGG | + | chr3_3:75011727-75011746 | None:intergenic | 30.0% | |
| ! | GTTGATGAAGAAAAAAAGGA+AGG | + | chr3_3:75011747-75011766 | None:intergenic | 30.0% |
| TTCAAACACAAATCACGTAA+TGG | - | chr3_3:75011838-75011857 | Msa0472600:intron | 30.0% | |
| ! | AATGGTTTTTATCTTTGACC+CGG | - | chr3_3:75011856-75011875 | Msa0472600:intron | 30.0% |
| ATGTAAAGTAACCACGTAAA+AGG | - | chr3_3:75011922-75011941 | Msa0472600:intron | 30.0% | |
| ! | TTTGAGATGAGATTGAGATT+TGG | + | chr3_3:75012032-75012051 | None:intergenic | 30.0% |
| TGAAGAATGAACGAATGAAA+TGG | + | chr3_3:75012069-75012088 | None:intergenic | 30.0% | |
| !!! | GATGAAGTTTTTGTTGTTTC+TGG | + | chr3_3:75012168-75012187 | None:intergenic | 30.0% |
| ! | ATAAGGATGATTTGTGAAAG+AGG | + | chr3_3:75003918-75003937 | None:intergenic | 30.0% |
| CTTTCACAAATCATCCTTAT+TGG | - | chr3_3:75003918-75003937 | Msa0472600:three_prime_UTR | 30.0% | |
| !!! | TTAGTTTGTTTTTGTTGTCC+AGG | - | chr3_3:75012237-75012256 | Msa0472600:intron | 30.0% |
| TAAGTTCCTTTACGATTCAT+GGG | + | chr3_3:75004275-75004294 | None:intergenic | 30.0% | |
| TGGAACTTATATAGGTTTCA+TGG | - | chr3_3:75004400-75004419 | Msa0472600:intron | 30.0% | |
| AGTAAAGTTATTCGTGATGA+TGG | - | chr3_3:75004470-75004489 | Msa0472600:intron | 30.0% | |
| !! | AGTTTAGTTTGAGAACAAGA+GGG | - | chr3_3:75012942-75012961 | Msa0472600:intron | 30.0% |
| GTTGAACAATGTGTTCTATT+GGG | - | chr3_3:75012964-75012983 | Msa0472600:intron | 30.0% | |
| TTGAACAATGTGTTCTATTG+GGG | - | chr3_3:75012965-75012984 | Msa0472600:intron | 30.0% | |
| TAGAAAGAAAAGAGGAATTG+TGG | - | chr3_3:75004751-75004770 | Msa0472600:intron | 30.0% | |
| AGAAAGAAAAGAGGAATTGT+GGG | - | chr3_3:75004752-75004771 | Msa0472600:intron | 30.0% | |
| CTGTTCTTGGATCTATTATA+TGG | - | chr3_3:75004789-75004808 | Msa0472600:intron | 30.0% | |
| GTTCTTGGATCTATTATATG+GGG | - | chr3_3:75004791-75004810 | Msa0472600:intron | 30.0% | |
| GATTAAACATAAACATGGCA+AGG | - | chr3_3:75004832-75004851 | Msa0472600:intron | 30.0% | |
| !!! | GTATTTTTCTTTTGGGTTGT+TGG | - | chr3_3:75013198-75013217 | Msa0472600:intron | 30.0% |
| CAAAGAATTATCTAAGCTGT+AGG | - | chr3_3:75013391-75013410 | Msa0472600:CDS | 30.0% | |
| TTAGTGATTAGCATTTCTTG+TGG | - | chr3_3:75013871-75013890 | Msa0472600:intron | 30.0% | |
| !! | ACTGATTTTTACACATACAC+AGG | - | chr3_3:75014038-75014057 | Msa0472600:CDS | 30.0% |
| !!! | TCCCTTATTGTTAGTTTTGA+TGG | - | chr3_3:75014183-75014202 | Msa0472600:CDS | 30.0% |
| TTGCTCCTTCAAATAACAAT+GGG | - | chr3_3:75014257-75014276 | Msa0472600:CDS | 30.0% | |
| !!! | GATGAAGTTTTTGAGGTTTC+CGG | + | chr3_3:75003876-75003895 | None:intergenic | 35.0% |
| ACAAATCATCCTTATTGGGT+TGG | - | chr3_3:75003923-75003942 | Msa0472600:three_prime_UTR | 35.0% | |
| !!! | TTGGTTTGTTTTTGTTGTCC+AGG | - | chr3_3:75003942-75003961 | Msa0472600:three_prime_UTR | 35.0% |
| TTCAATGCTCTTTCAGGAAT+GGG | - | chr3_3:75003969-75003988 | Msa0472600:three_prime_UTR | 35.0% | |
| ! | TTCACAATTTTCGGAATCCT+AGG | - | chr3_3:75004053-75004072 | Msa0472600:three_prime_UTR | 35.0% |
| AGATGTCATAATAGCACCTT+GGG | + | chr3_3:75004246-75004265 | None:intergenic | 35.0% | |
| AAGATGTCATAATAGCACCT+TGG | + | chr3_3:75004247-75004266 | None:intergenic | 35.0% | |
| GTAAGTTCCTTTACGATTCA+TGG | + | chr3_3:75004276-75004295 | None:intergenic | 35.0% | |
| ! | TTCATGGCTTTTATGTCACT+AGG | - | chr3_3:75004416-75004435 | Msa0472600:intron | 35.0% |
| ! | TCATGGCTTTTATGTCACTA+GGG | - | chr3_3:75004417-75004436 | Msa0472600:intron | 35.0% |
| TCACGAATAACTTTACTAGC+AGG | + | chr3_3:75004467-75004486 | None:intergenic | 35.0% | |
| CACAAATGATAGGGTCAATT+GGG | - | chr3_3:75004696-75004715 | Msa0472600:intron | 35.0% | |
| !! | AATTGGGATTGGTTACACTA+TGG | - | chr3_3:75004712-75004731 | Msa0472600:intron | 35.0% |
| !! | GTAAACCATACTCTGAAACA+TGG | + | chr3_3:75004933-75004952 | None:intergenic | 35.0% |
| TGTTTCAGAGTATGGTTTAC+TGG | - | chr3_3:75004933-75004952 | Msa0472600:intron | 35.0% | |
| ! | AGTATGGTTTACTGGTCTAT+TGG | - | chr3_3:75004941-75004960 | Msa0472600:intron | 35.0% |
| CTACTGCTAGTACTAATGTT+TGG | - | chr3_3:75005345-75005364 | Msa0472600:three_prime_UTR | 35.0% | |
| ACTAATGTTTGGACTTACAC+AGG | - | chr3_3:75005356-75005375 | Msa0472600:three_prime_UTR | 35.0% | |
| AGGTACACAGGATTCTATAA+AGG | - | chr3_3:75005376-75005395 | Msa0472600:three_prime_UTR | 35.0% | |
| GGTACACAGGATTCTATAAA+GGG | - | chr3_3:75005377-75005396 | Msa0472600:three_prime_UTR | 35.0% | |
| CTATAAAGGGATACAAAGTG+CGG | - | chr3_3:75005390-75005409 | Msa0472600:three_prime_UTR | 35.0% | |
| TATAAAGGGATACAAAGTGC+GGG | - | chr3_3:75005391-75005410 | Msa0472600:three_prime_UTR | 35.0% | |
| TTCACAATCAACTGTGTCAT+TGG | + | chr3_3:75005457-75005476 | None:intergenic | 35.0% | |
| TGACACAGTTGATTGTGAAT+TGG | - | chr3_3:75005458-75005477 | Msa0472600:three_prime_UTR | 35.0% | |
| GACACAGTTGATTGTGAATT+GGG | - | chr3_3:75005459-75005478 | Msa0472600:three_prime_UTR | 35.0% | |
| ACTAAGCTATCCGTTATTGT+TGG | - | chr3_3:75005492-75005511 | Msa0472600:three_prime_UTR | 35.0% | |
| ATGGGTAAGGAAGAACTATT+TGG | - | chr3_3:75005659-75005678 | Msa0472600:CDS | 35.0% | |
| CAAGAATGTTACCGAAATCA+TGG | - | chr3_3:75005953-75005972 | Msa0472600:CDS | 35.0% | |
| TACAAGAGACAAACAACACA+AGG | - | chr3_3:75006087-75006106 | Msa0472600:intron | 35.0% | |
| TTCTCTAACCTTGAGGAAAA+TGG | - | chr3_3:75006422-75006441 | Msa0472600:intron | 35.0% | |
| ! | TCATGTCTTCTGCATTTTGT+GGG | + | chr3_3:75006502-75006521 | None:intergenic | 35.0% |
| ! | TTCATGTCTTCTGCATTTTG+TGG | + | chr3_3:75006503-75006522 | None:intergenic | 35.0% |
| GTTGAAACCTGAATTGGATT+GGG | + | chr3_3:75006582-75006601 | None:intergenic | 35.0% | |
| GTTAACACTTAGCTATGACT+TGG | - | chr3_3:75006771-75006790 | Msa0472600:intron | 35.0% | |
| GTTTCAGTTTATTGGAGTTC+TGG | + | chr3_3:75006984-75007003 | None:intergenic | 35.0% | |
| ! | TTAGCTGCTGCTTATTTATC+TGG | + | chr3_3:75007042-75007061 | None:intergenic | 35.0% |
| AAGATTGGACAAGTGATAGT+TGG | + | chr3_3:75007067-75007086 | None:intergenic | 35.0% | |
| ! | TGTGTCATTGAACGCAAATT+TGG | - | chr3_3:75007283-75007302 | Msa0472600:intron | 35.0% |
| GTCATCTATTGAGGGATATA+GGG | + | chr3_3:75007340-75007359 | None:intergenic | 35.0% | |
| GTCAAATAGGTCATCTATTG+AGG | + | chr3_3:75007349-75007368 | None:intergenic | 35.0% | |
| GTGGCAAGATCTAATATTCA+AGG | + | chr3_3:75007611-75007630 | None:intergenic | 35.0% | |
| !! | CAATTAACCAAATTTGCTGC+CGG | - | chr3_3:75008187-75008206 | Msa0472600:intron | 35.0% |
| !! | AAAGAAAAGTGTTGATTCCG+TGG | - | chr3_3:75008408-75008427 | Msa0472600:intron | 35.0% |
| !! | AAGAAAAGTGTTGATTCCGT+GGG | - | chr3_3:75008409-75008428 | Msa0472600:intron | 35.0% |
| !!! | TTTTGTTTTGGTTGATTCCG+TGG | - | chr3_3:75008442-75008461 | Msa0472600:intron | 35.0% |
| !!! | TTTGTTTTGGTTGATTCCGT+GGG | - | chr3_3:75008443-75008462 | Msa0472600:intron | 35.0% |
| ! | CATTTTACACGGGATTCATT+TGG | - | chr3_3:75008512-75008531 | Msa0472600:intron | 35.0% |
| ! | TTACCGTGCTAGTAGTATTT+TGG | - | chr3_3:75008550-75008569 | Msa0472600:intron | 35.0% |
| ATGCCAAAATACTACTAGCA+CGG | + | chr3_3:75008556-75008575 | None:intergenic | 35.0% | |
| !!! | TCTTTTCAGGTTTTTGCTCT+TGG | - | chr3_3:75008628-75008647 | Msa0472600:intron | 35.0% |
| !!! | GTTTTTTTGGTGACAGACAA+AGG | + | chr3_3:75008660-75008679 | None:intergenic | 35.0% |
| CTAAGATTCGGCCAATAATT+CGG | + | chr3_3:75008807-75008826 | None:intergenic | 35.0% | |
| !! | AACCCAGTGATTCTAAGATT+CGG | + | chr3_3:75008819-75008838 | None:intergenic | 35.0% |
| ! | CTTTGAAAATAACCGTTCCT+GGG | + | chr3_3:75009371-75009390 | None:intergenic | 35.0% |
| !!! | ATGTTTTTTGGTAGTGTTCG+AGG | - | chr3_3:75009916-75009935 | Msa0472600:intron | 35.0% |
| TTAGGAAGACTTTCGTAGAA+TGG | + | chr3_3:75010661-75010680 | None:intergenic | 35.0% | |
| ! | AACTAATGGATACGACACTT+TGG | - | chr3_3:75011284-75011303 | Msa0472600:intron | 35.0% |
| ! | ACTAATGGATACGACACTTT+GGG | - | chr3_3:75011285-75011304 | Msa0472600:intron | 35.0% |
| CAATATTACAAGGTCAGCTT+TGG | + | chr3_3:75011423-75011442 | None:intergenic | 35.0% | |
| CAAAGCTGACCTTGTAATAT+TGG | - | chr3_3:75011421-75011440 | Msa0472600:intron | 35.0% | |
| CTGACATCTTTCTCTATTCA+CGG | - | chr3_3:75011798-75011817 | Msa0472600:intron | 35.0% | |
| !!! | TGTCATTTTCAGTGTAGGTT+CGG | + | chr3_3:75011893-75011912 | None:intergenic | 35.0% |
| ! | TACAAGTCAAACCTTTTACG+TGG | + | chr3_3:75011936-75011955 | None:intergenic | 35.0% |
| AAAGAGAGAGTGAAGATATG+GGG | + | chr3_3:75012093-75012112 | None:intergenic | 35.0% | |
| GAAAGAGAGAGTGAAGATAT+GGG | + | chr3_3:75012094-75012113 | None:intergenic | 35.0% | |
| AGAAAGAGAGAGTGAAGATA+TGG | + | chr3_3:75012095-75012114 | None:intergenic | 35.0% | |
| TCTTTCTCAACTTTCCACAT+GGG | - | chr3_3:75012108-75012127 | Msa0472600:intron | 35.0% | |
| TCAACTGAACATGAAGAATC+AGG | - | chr3_3:75012132-75012151 | Msa0472600:intron | 35.0% | |
| GAGGTGAATTGTATCTGAAA+AGG | + | chr3_3:75012194-75012213 | None:intergenic | 35.0% | |
| TTCAATGCTCTTTCAGGAAT+GGG | - | chr3_3:75003969-75003988 | Msa0472600:three_prime_UTR | 35.0% | |
| GTAAGTTCCTTTACGATTCA+TGG | + | chr3_3:75004276-75004295 | None:intergenic | 35.0% | |
| ! | TTCATGGCTTTTATGTCACT+AGG | - | chr3_3:75004416-75004435 | Msa0472600:intron | 35.0% |
| ! | TCATGGCTTTTATGTCACTA+GGG | - | chr3_3:75004417-75004436 | Msa0472600:intron | 35.0% |
| TCACGAATAACTTTACTAGC+AGG | + | chr3_3:75004467-75004486 | None:intergenic | 35.0% | |
| !! | CAGTTTAGTTTGAGAACAAG+AGG | - | chr3_3:75012941-75012960 | Msa0472600:intron | 35.0% |
| GGTTGAACAATGTGTTCTAT+TGG | - | chr3_3:75012963-75012982 | Msa0472600:intron | 35.0% | |
| CACAAATGATAGGGTCAATT+GGG | - | chr3_3:75004696-75004715 | Msa0472600:intron | 35.0% | |
| !! | AATTGGGATTGGTTACACTA+TGG | - | chr3_3:75004712-75004731 | Msa0472600:intron | 35.0% |
| TGTTTCAGAGTATGGTTTAC+TGG | - | chr3_3:75004933-75004952 | Msa0472600:intron | 35.0% | |
| !! | AAATTGATTAGCTTGTGAGC+AGG | - | chr3_3:75013484-75013503 | Msa0472600:CDS | 35.0% |
| TTAGCAACTAGCATTTCTTG+TGG | - | chr3_3:75013953-75013972 | Msa0472600:CDS | 35.0% | |
| CAGTACTAGTAGTACTTCAA+TGG | + | chr3_3:75014022-75014041 | None:intergenic | 35.0% | |
| AGGTACACTGGATTCTATAA+AGG | - | chr3_3:75014058-75014077 | Msa0472600:CDS | 35.0% | |
| TATAAAGGAATACAGAGTGC+AGG | - | chr3_3:75014073-75014092 | Msa0472600:CDS | 35.0% | |
| ATAAAGGAATACAGAGTGCA+GGG | - | chr3_3:75014074-75014093 | Msa0472600:CDS | 35.0% | |
| GTTGCTCCTTCAAATAACAA+TGG | - | chr3_3:75014256-75014275 | Msa0472600:CDS | 35.0% | |
| !! | ACAGACCCATTGTTATTTGA+AGG | + | chr3_3:75014265-75014284 | None:intergenic | 35.0% |
| GGATATACTAGCATAGTCAA+TGG | + | chr3_3:75014288-75014307 | None:intergenic | 35.0% | |
| GTTCAATGCTCTTTCAGGAA+TGG | - | chr3_3:75003968-75003987 | Msa0472600:three_prime_UTR | 40.0% | |
| ! | ACAATTTTCGGAATCCTAGG+TGG | - | chr3_3:75004056-75004075 | Msa0472600:three_prime_UTR | 40.0% |
| ACCTGCGAAAAGAGTTAAGT+GGG | + | chr3_3:75004105-75004124 | None:intergenic | 40.0% | |
| AACCTGCGAAAAGAGTTAAG+TGG | + | chr3_3:75004106-75004125 | None:intergenic | 40.0% | |
| AGAACCAGTGTAAAGGACAT+AGG | + | chr3_3:75004135-75004154 | None:intergenic | 40.0% | |
| AGAGGAAAGAACCAGTGTAA+AGG | + | chr3_3:75004142-75004161 | None:intergenic | 40.0% | |
| !! | CAAGCTTTTGCTGTAGTTTC+CGG | - | chr3_3:75004182-75004201 | Msa0472600:intron | 40.0% |
| TTCCTTTACGATTCATGGGT+GGG | + | chr3_3:75004271-75004290 | None:intergenic | 40.0% | |
| !! | TGGAGTATTTTCAACATGGG+TGG | - | chr3_3:75004308-75004327 | Msa0472600:intron | 40.0% |
| !! | TTCAACATGGGTGGTGTTAT+TGG | - | chr3_3:75004317-75004336 | Msa0472600:intron | 40.0% |
| CATCATTAACAGTAGCAGCT+TGG | + | chr3_3:75004382-75004401 | None:intergenic | 40.0% | |
| CAAGCTGCTACTGTTAATGA+TGG | - | chr3_3:75004380-75004399 | Msa0472600:intron | 40.0% | |
| AAATGTTGCAACTGAGTGTG+TGG | - | chr3_3:75004520-75004539 | Msa0472600:intron | 40.0% | |
| AAATTACTAGACCAAGCTGC+AGG | + | chr3_3:75004590-75004609 | None:intergenic | 40.0% | |
| ! | TATTGGGGAGCACAAATGAT+AGG | - | chr3_3:75004686-75004705 | Msa0472600:intron | 40.0% |
| ! | ATTGGGGAGCACAAATGATA+GGG | - | chr3_3:75004687-75004706 | Msa0472600:intron | 40.0% |
| GCACAAATGATAGGGTCAAT+TGG | - | chr3_3:75004695-75004714 | Msa0472600:intron | 40.0% | |
| ATGATAGGGTCAATTGGGAT+TGG | - | chr3_3:75004701-75004720 | Msa0472600:intron | 40.0% | |
| AGGAATTGTGGGAATTAGTG+TGG | - | chr3_3:75004763-75004782 | Msa0472600:intron | 40.0% | |
| ! | ATTAGTGTGGTTGCTGTTCT+TGG | - | chr3_3:75004776-75004795 | Msa0472600:intron | 40.0% |
| CTTGGATCTATTATATGGGG+TGG | - | chr3_3:75004794-75004813 | Msa0472600:intron | 40.0% | |
| TATTATATGGGGTGGTGCAT+TGG | - | chr3_3:75004802-75004821 | Msa0472600:intron | 40.0% | |
| ACATAAACATGGCAAGGTCT+TGG | - | chr3_3:75004838-75004857 | Msa0472600:intron | 40.0% | |
| ! | TGGCAAGGTCTTGGATTTTA+AGG | - | chr3_3:75004847-75004866 | Msa0472600:intron | 40.0% |
| !! | GTCTTGGATTTTAAGGAGTC+TGG | - | chr3_3:75004854-75004873 | Msa0472600:intron | 40.0% |
| AGATGCCATGTTTCAGAGTA+TGG | - | chr3_3:75004925-75004944 | Msa0472600:intron | 40.0% | |
| ! | TTACTGGTCTATTGGAGCAT+TGG | - | chr3_3:75004949-75004968 | Msa0472600:intron | 40.0% |
| !! | ATGACTCTGAAGTTCTTAGC+AGG | - | chr3_3:75004975-75004994 | Msa0472600:three_prime_UTR | 40.0% |
| ATAAAGGGATACAAAGTGCG+GGG | - | chr3_3:75005392-75005411 | Msa0472600:three_prime_UTR | 40.0% | |
| TGTGAAAGAGGACAATAACG+AGG | - | chr3_3:75005531-75005550 | Msa0472600:three_prime_UTR | 40.0% | |
| AGCAAGGAGAAATGTGACAA+GGG | - | chr3_3:75005798-75005817 | Msa0472600:CDS | 40.0% | |
| ATCGTGCATGTAACAGTAGT+TGG | + | chr3_3:75005843-75005862 | None:intergenic | 40.0% | |
| TAGAGAAGAGAGGCTAGATT+GGG | + | chr3_3:75006409-75006428 | None:intergenic | 40.0% | |
| TTAGAGAAGAGAGGCTAGAT+TGG | + | chr3_3:75006410-75006429 | None:intergenic | 40.0% | |
| AGAAGCAGAAGAAGCTACTT+CGG | + | chr3_3:75006537-75006556 | None:intergenic | 40.0% | |
| ! | TGAATTGGATTGGGAAGTTG+TGG | + | chr3_3:75006573-75006592 | None:intergenic | 40.0% |
| ACAACTTCCCAATCCAATTC+AGG | - | chr3_3:75006572-75006591 | Msa0472600:intron | 40.0% | |
| CGTTGAAACCTGAATTGGAT+TGG | + | chr3_3:75006583-75006602 | None:intergenic | 40.0% | |
| AGCATCGTTGAAACCTGAAT+TGG | + | chr3_3:75006588-75006607 | None:intergenic | 40.0% | |
| ! | AGTACAATATGTGTCGGTGT+TGG | - | chr3_3:75006905-75006924 | Msa0472600:intron | 40.0% |
| TATGTAACACCGACACAAGT+CGG | + | chr3_3:75006934-75006953 | None:intergenic | 40.0% | |
| !! | TTGGGTGCTGAGAAAAAGAT+TGG | + | chr3_3:75007082-75007101 | None:intergenic | 40.0% |
| TTCTCAGCACCCAAATATGA+AGG | - | chr3_3:75007088-75007107 | Msa0472600:intron | 40.0% | |
| GGTCATCTATTGAGGGATAT+AGG | + | chr3_3:75007341-75007360 | None:intergenic | 40.0% | |
| ! | ATATGCATTGGTACGTGTGT+CGG | - | chr3_3:75007517-75007536 | Msa0472600:intron | 40.0% |
| TACGTGTGTCGGAATCAATT+AGG | - | chr3_3:75007528-75007547 | Msa0472600:intron | 40.0% | |
| GTCATCTAATATGGAACGGA+TGG | - | chr3_3:75007550-75007569 | Msa0472600:intron | 40.0% | |
| TAATTGAAAGCCTGACAGCT+AGG | + | chr3_3:75007829-75007848 | None:intergenic | 40.0% | |
| TCTTCACACCGAAGAATTCT+AGG | - | chr3_3:75007928-75007947 | Msa0472600:intron | 40.0% | |
| ATGTTAGAGGGAGAGACAAT+GGG | + | chr3_3:75008033-75008052 | None:intergenic | 40.0% | |
| ! | AATAAGGAGGGCATGTTAGA+GGG | + | chr3_3:75008045-75008064 | None:intergenic | 40.0% |
| ! | TAATAAGGAGGGCATGTTAG+AGG | + | chr3_3:75008046-75008065 | None:intergenic | 40.0% |
| CACACTGCTTGACAAAAGAA+AGG | - | chr3_3:75008229-75008248 | Msa0472600:intron | 40.0% | |
| !! | GGCCAGTATGCTTTTTGTTT+TGG | - | chr3_3:75008430-75008449 | Msa0472600:intron | 40.0% |
| TCTTTCTGTATATTGGCCCA+CGG | + | chr3_3:75008462-75008481 | None:intergenic | 40.0% | |
| CACGGGATTCATTTGGATAA+CGG | - | chr3_3:75008519-75008538 | Msa0472600:intron | 40.0% | |
| TCACTCGATCACCGAATTAT+TGG | - | chr3_3:75008793-75008812 | Msa0472600:intron | 40.0% | |
| TCACTTAAGGAGACCTAAAG+AGG | + | chr3_3:75009160-75009179 | None:intergenic | 40.0% | |
| ! | TGATTGATGGCTGTGATCTT+TGG | - | chr3_3:75009243-75009262 | Msa0472600:intron | 40.0% |
| ! | TGGGACTTCTAGAGACAAAT+CGG | + | chr3_3:75009352-75009371 | None:intergenic | 40.0% |
| ! | CCTTTGAAAATAACCGTTCC+TGG | + | chr3_3:75009372-75009391 | None:intergenic | 40.0% |
| !! | CCAGGAACGGTTATTTTCAA+AGG | - | chr3_3:75009369-75009388 | Msa0472600:intron | 40.0% |
| CATAATATATGCAAGGTCCG+AGG | + | chr3_3:75009948-75009967 | None:intergenic | 40.0% | |
| ACAGAACGAAAGTCAGTCTT+AGG | + | chr3_3:75010745-75010764 | None:intergenic | 40.0% | |
| ! | CACTGTTGTTTACCCATTGT+AGG | + | chr3_3:75011501-75011520 | None:intergenic | 40.0% |
| ! | TTTTTATCTTTGACCCGGAC+CGG | - | chr3_3:75011861-75011880 | Msa0472600:intron | 40.0% |
| !!! | CGTTGTGTCATTTTCAGTGT+AGG | + | chr3_3:75011898-75011917 | None:intergenic | 40.0% |
| CTCTTTCTCAACTTTCCACA+TGG | - | chr3_3:75012107-75012126 | Msa0472600:intron | 40.0% | |
| GTTCAATGCTCTTTCAGGAA+TGG | - | chr3_3:75003968-75003987 | Msa0472600:three_prime_UTR | 40.0% | |
| TGCAAAGGTTGTGTAAAGTG+CGG | + | chr3_3:75012334-75012353 | None:intergenic | 40.0% | |
| TACACAACCTTTGCAGTGTT+TGG | - | chr3_3:75012339-75012358 | Msa0472600:intron | 40.0% | |
| TAGGATACCAAACACTGCAA+AGG | + | chr3_3:75012349-75012368 | None:intergenic | 40.0% | |
| TTTGCAGTGTTTGGTATCCT+AGG | - | chr3_3:75012348-75012367 | Msa0472600:intron | 40.0% | |
| TCAACTTATGTACTCTACGC+TGG | - | chr3_3:75012423-75012442 | Msa0472600:intron | 40.0% | |
| !! | CAAGCTTTTGCTATAGTTGC+CGG | - | chr3_3:75012477-75012496 | Msa0472600:intron | 40.0% |
| TATCCACCCATGAATCGTAA+AGG | - | chr3_3:75012561-75012580 | Msa0472600:intron | 40.0% | |
| !! | TGGAGTATTTTCAACATGGG+TGG | - | chr3_3:75004308-75004327 | Msa0472600:intron | 40.0% |
| !! | TTCAACATGGGTGGTGTTAT+TGG | - | chr3_3:75004317-75004336 | Msa0472600:intron | 40.0% |
| AAATGTTGCAACTGAGTGTG+TGG | - | chr3_3:75004520-75004539 | Msa0472600:intron | 40.0% | |
| ! | TATTGGGGAGCACAAATGAT+AGG | - | chr3_3:75004686-75004705 | Msa0472600:intron | 40.0% |
| ! | ATTGGGGAGCACAAATGATA+GGG | - | chr3_3:75004687-75004706 | Msa0472600:intron | 40.0% |
| GCACAAATGATAGGGTCAAT+TGG | - | chr3_3:75004695-75004714 | Msa0472600:intron | 40.0% | |
| ATGATAGGGTCAATTGGGAT+TGG | - | chr3_3:75004701-75004720 | Msa0472600:intron | 40.0% | |
| AGGAATTGTGGGAATTAGTG+TGG | - | chr3_3:75004763-75004782 | Msa0472600:intron | 40.0% | |
| ! | ATTAGTGTGGTTGCTGTTCT+TGG | - | chr3_3:75004776-75004795 | Msa0472600:intron | 40.0% |
| CTTGGATCTATTATATGGGG+TGG | - | chr3_3:75004794-75004813 | Msa0472600:intron | 40.0% | |
| TATTATATGGGGTGGTGCAT+TGG | - | chr3_3:75004802-75004821 | Msa0472600:intron | 40.0% | |
| ACATAAACATGGCAAGGTCT+TGG | - | chr3_3:75004838-75004857 | Msa0472600:intron | 40.0% | |
| ! | TGGCAAGGTCTTGGATTTTA+AGG | - | chr3_3:75004847-75004866 | Msa0472600:intron | 40.0% |
| !! | GTCTTGGATTTTAAGGAGTC+TGG | - | chr3_3:75004854-75004873 | Msa0472600:intron | 40.0% |
| GGATGCTATGTTTCAGAGTA+TGG | - | chr3_3:75013219-75013238 | Msa0472600:intron | 40.0% | |
| AGTATGGTTTACTGGTCCAT+TGG | - | chr3_3:75013235-75013254 | Msa0472600:intron | 40.0% | |
| !! | ATGACTCTGAAGTTCTTAGC+AGG | - | chr3_3:75004975-75004994 | Msa0472600:three_prime_UTR | 40.0% |
| TTGAGTCACAGTTGCAGTTA+CGG | - | chr3_3:75013511-75013530 | Msa0472600:CDS | 40.0% | |
| !! | ATTTTGGTACTCATGCGTCA+AGG | + | chr3_3:75013633-75013652 | None:intergenic | 40.0% |
| TTGACGCATGAGTACCAAAA+TGG | - | chr3_3:75013632-75013651 | Msa0472600:CDS | 40.0% | |
| ! | AAAATGGTGGGACCATTTCA+CGG | - | chr3_3:75013648-75013667 | Msa0472600:CDS | 40.0% |
| ! | CACATGCACTAAAGCTCTAA+CGG | + | chr3_3:75013676-75013695 | None:intergenic | 40.0% |
| ! | GTTAGAGCTTTAGTGCATGT+GGG | - | chr3_3:75013675-75013694 | Msa0472600:CDS | 40.0% |
| TTACACATACACAGGTACAC+TGG | - | chr3_3:75014046-75014065 | Msa0472600:CDS | 40.0% | |
| TAAAGGAATACAGAGTGCAG+GGG | - | chr3_3:75014075-75014094 | Msa0472600:CDS | 40.0% | |
| TAACCATAACGTGTCTCCAA+TGG | - | chr3_3:75014120-75014139 | Msa0472600:intron | 40.0% | |
| TTCACTATCAACTGTGCCAT+TGG | + | chr3_3:75014139-75014158 | None:intergenic | 40.0% | |
| !! | TGGCACAGTTGATAGTGAAT+TGG | - | chr3_3:75014140-75014159 | Msa0472600:intron | 40.0% |
| !! | GGCACAGTTGATAGTGAATT+GGG | - | chr3_3:75014141-75014160 | Msa0472600:intron | 40.0% |
| GAAAGAGAACAATGAGGAAG+AGG | - | chr3_3:75014216-75014235 | Msa0472600:CDS | 40.0% | |
| !!! | GAAGTTTTTGAGGTTTCCGG+TGG | + | chr3_3:75003873-75003892 | None:intergenic | 45.0% |
| !! | GAAAGAGCATTGAACATGCC+TGG | + | chr3_3:75003963-75003982 | None:intergenic | 45.0% |
| GGCATGTTCAATGCTCTTTC+AGG | - | chr3_3:75003963-75003982 | Msa0472600:three_prime_UTR | 45.0% | |
| AATGCTCTTTCAGGAATGGG+TGG | - | chr3_3:75003972-75003991 | Msa0472600:three_prime_UTR | 45.0% | |
| TGTGAAGCTTGTGTAGAGTG+CGG | + | chr3_3:75004039-75004058 | None:intergenic | 45.0% | |
| ! | ATTTTCGGAATCCTAGGTGG+TGG | - | chr3_3:75004059-75004078 | Msa0472600:three_prime_UTR | 45.0% |
| TGTTATAGATGCCACCACCT+AGG | + | chr3_3:75004073-75004092 | None:intergenic | 45.0% | |
| GGTGGCATCTATAACATCCT+CGG | - | chr3_3:75004077-75004096 | Msa0472600:three_prime_UTR | 45.0% | |
| CCTGCGAAAAGAGTTAAGTG+GGG | + | chr3_3:75004104-75004123 | None:intergenic | 45.0% | |
| TCCTCCTATGTCCTTTACAC+TGG | - | chr3_3:75004128-75004147 | Msa0472600:three_prime_UTR | 45.0% | |
| ACCAGTGTAAAGGACATAGG+AGG | + | chr3_3:75004132-75004151 | None:intergenic | 45.0% | |
| TACCCACCCATGAATCGTAA+AGG | - | chr3_3:75004266-75004285 | Msa0472600:intron | 45.0% | |
| GTTCCTTTACGATTCATGGG+TGG | + | chr3_3:75004272-75004291 | None:intergenic | 45.0% | |
| !! | AACATGGGTGGTGTTATTGG+TGG | - | chr3_3:75004320-75004339 | Msa0472600:intron | 45.0% |
| TTCTCATGATTCCTGCAGCT+TGG | - | chr3_3:75004576-75004595 | Msa0472600:intron | 45.0% | |
| !!! | GAGTCTGGTTCTGATTTTGC+TGG | - | chr3_3:75004869-75004888 | Msa0472600:intron | 45.0% |
| TTGGACTTACACAGGTACAC+AGG | - | chr3_3:75005364-75005383 | Msa0472600:three_prime_UTR | 45.0% | |
| TAAAGGGATACAAAGTGCGG+GGG | - | chr3_3:75005393-75005412 | Msa0472600:three_prime_UTR | 45.0% | |
| TCACTGCAGATGTTTCAGCA+AGG | - | chr3_3:75005782-75005801 | Msa0472600:CDS | 45.0% | |
| CAGCAAGGAGAAATGTGACA+AGG | - | chr3_3:75005797-75005816 | Msa0472600:CDS | 45.0% | |
| CTTAAGATGCATCGTGTGCT+AGG | - | chr3_3:75005916-75005935 | Msa0472600:CDS | 45.0% | |
| GTTACCGAAATCATGGAGTG+CGG | - | chr3_3:75005960-75005979 | Msa0472600:CDS | 45.0% | |
| CTATCCGCACTCCATGATTT+CGG | + | chr3_3:75005967-75005986 | None:intergenic | 45.0% | |
| TCCTCAAGGTTAGAGAAGAG+AGG | + | chr3_3:75006419-75006438 | None:intergenic | 45.0% | |
| ! | TGCGGAAACCATTTTCCTCA+AGG | + | chr3_3:75006433-75006452 | None:intergenic | 45.0% |
| ! | TGCATTTTGTGGGACCTTGT+TGG | + | chr3_3:75006492-75006511 | None:intergenic | 45.0% |
| AAGAAGCTACTTCGGACTTG+AGG | + | chr3_3:75006529-75006548 | None:intergenic | 45.0% | |
| AGCACGTCTTGCACAAAAAC+TGG | - | chr3_3:75006843-75006862 | Msa0472600:intron | 45.0% | |
| !! | TGTTGGATACCGACTTGTGT+CGG | - | chr3_3:75006922-75006941 | Msa0472600:intron | 45.0% |
| GAATTCGATTCCTAGCTGTC+AGG | - | chr3_3:75007816-75007835 | Msa0472600:intron | 45.0% | |
| GGTGTGCTCCTAGAATTCTT+CGG | + | chr3_3:75007939-75007958 | None:intergenic | 45.0% | |
| AAGTGCTTCAAAGCCTGACA+AGG | + | chr3_3:75007985-75008004 | None:intergenic | 45.0% | |
| TGTTAGAGGGAGAGACAATG+GGG | + | chr3_3:75008032-75008051 | None:intergenic | 45.0% | |
| CATGTTAGAGGGAGAGACAA+TGG | + | chr3_3:75008034-75008053 | None:intergenic | 45.0% | |
| ! | ACAAAAAGCATACTGGCCCA+CGG | + | chr3_3:75008428-75008447 | None:intergenic | 45.0% |
| TGGCCGAATCTTAGAATCAC+TGG | - | chr3_3:75008813-75008832 | Msa0472600:intron | 45.0% | |
| GGCCGAATCTTAGAATCACT+GGG | - | chr3_3:75008814-75008833 | Msa0472600:intron | 45.0% | |
| ! | TTGATGGCTGTGATCTTTGG+TGG | - | chr3_3:75009246-75009265 | Msa0472600:intron | 45.0% |
| ! | GATTTGTCTCTAGAAGTCCC+AGG | - | chr3_3:75009351-75009370 | Msa0472600:intron | 45.0% |
| GTTGTGTATGGCGCTGTATA+CGG | + | chr3_3:75011586-75011605 | None:intergenic | 45.0% | |
| ! | TTTTATCTTTGACCCGGACC+GGG | - | chr3_3:75011862-75011881 | Msa0472600:intron | 45.0% |
| ! | TTTTCAGTGTAGGTTCGGAC+AGG | + | chr3_3:75011888-75011907 | None:intergenic | 45.0% |
| CATGTTCAGTTGAACCCATG+TGG | + | chr3_3:75012125-75012144 | None:intergenic | 45.0% | |
| !! | GAAAGAGCATTGAACATGCC+TGG | + | chr3_3:75003963-75003982 | None:intergenic | 45.0% |
| GGCATGTTCAATGCTCTTTC+AGG | - | chr3_3:75003963-75003982 | Msa0472600:three_prime_UTR | 45.0% | |
| AATGCTCTTTCAGGAATGGG+AGG | - | chr3_3:75003972-75003991 | Msa0472600:three_prime_UTR | 45.0% | |
| GGTTGTGTAAAGTGCGGTTA+AGG | + | chr3_3:75012328-75012347 | None:intergenic | 45.0% | |
| AAAGAGTTAAGTGAGGTCCG+AGG | + | chr3_3:75012392-75012411 | None:intergenic | 45.0% | |
| CCTGCGAAAAGAGTTAAGTG+AGG | + | chr3_3:75004104-75004123 | None:intergenic | 45.0% | |
| ! | CCTCACTTAACTCTTTTCGC+AGG | - | chr3_3:75012396-75012415 | Msa0472600:intron | 45.0% |
| CGGCAACTATAGCAAAAGCT+TGG | + | chr3_3:75012479-75012498 | None:intergenic | 45.0% | |
| CATCGGAGCAGGTCTATTAT+GGG | - | chr3_3:75012512-75012531 | Msa0472600:intron | 45.0% | |
| GTTCCTTTACGATTCATGGG+TGG | + | chr3_3:75004272-75004291 | None:intergenic | 45.0% | |
| !! | AACATGGGTGGTGTTATTGG+TGG | - | chr3_3:75004320-75004339 | Msa0472600:intron | 45.0% |
| CAAGCTGCTACGGTTAATGA+TGG | - | chr3_3:75012674-75012693 | Msa0472600:intron | 45.0% | |
| TTCTCATGATTCCTGCAGCT+TGG | - | chr3_3:75004576-75004595 | Msa0472600:intron | 45.0% | |
| AGATTACTAGACCAAGCTGC+AGG | + | chr3_3:75012884-75012903 | None:intergenic | 45.0% | |
| !!! | GAGTCTGGTTCTGATTTTGC+TGG | - | chr3_3:75004869-75004888 | Msa0472600:intron | 45.0% |
| GTCATTAGCTAGAGCTCCAA+TGG | + | chr3_3:75013254-75013273 | None:intergenic | 45.0% | |
| ACGCATGAGTACCAAAATGG+TGG | - | chr3_3:75013635-75013654 | Msa0472600:CDS | 45.0% | |
| CGCATGAGTACCAAAATGGT+GGG | - | chr3_3:75013636-75013655 | Msa0472600:CDS | 45.0% | |
| ! | GTGAAATGGTCCCACCATTT+TGG | + | chr3_3:75013649-75013668 | None:intergenic | 45.0% |
| ! | CGTTAGAGCTTTAGTGCATG+TGG | - | chr3_3:75013674-75013693 | Msa0472600:CDS | 45.0% |
| GGCTGTGAAAGAGAACAATG+AGG | - | chr3_3:75014210-75014229 | Msa0472600:CDS | 45.0% | |
| AGAGAACAATGAGGAAGAGG+AGG | - | chr3_3:75014219-75014238 | Msa0472600:CDS | 45.0% | |
| ! | GAAGGAGCAACTTGTTTGAC+AGG | + | chr3_3:75014247-75014266 | None:intergenic | 45.0% |
| CTATGCTAGTATATCCCCCT+TGG | - | chr3_3:75014292-75014311 | Msa0472600:CDS | 45.0% | |
| !!! | ATTAAAAAAATATTATGTTT+TGG | + | chr3_3:75005125-75005144 | None:intergenic | 5.0% |
| !! | TCTTAATTATAATAATTATA+AGG | - | chr3_3:75009423-75009442 | Msa0472600:intron | 5.0% |
| !! | CTTAATTATAATAATTATAA+GGG | - | chr3_3:75009424-75009443 | Msa0472600:intron | 5.0% |
| !! | AATAATTTAATAAAATTTCT+TGG | + | chr3_3:75011133-75011152 | None:intergenic | 5.0% |
| !! | ATTTATTAACAAATAAAAAA+AGG | + | chr3_3:75013705-75013724 | None:intergenic | 5.0% |
| AGAATCAGCCACTCAACCAC+CGG | - | chr3_3:75003854-75003873 | Msa0472600:three_prime_UTR | 50.0% | |
| GCTTGTGTAGAGTGCGGTTA+AGG | + | chr3_3:75004033-75004052 | None:intergenic | 50.0% | |
| AAAGAGTTAAGTGGGGTCCG+AGG | + | chr3_3:75004097-75004116 | None:intergenic | 50.0% | |
| ! | CCCCACTTAACTCTTTTCGC+AGG | - | chr3_3:75004101-75004120 | Msa0472600:three_prime_UTR | 50.0% |
| !! | GTAGTTTCCGGTGCTGTTCT+CGG | - | chr3_3:75004194-75004213 | Msa0472600:intron | 50.0% |
| GCATCGGAGCTGGACTATTA+TGG | - | chr3_3:75004216-75004235 | Msa0472600:intron | 50.0% | |
| ! | GGACTATTATGGAGTGCCCA+AGG | - | chr3_3:75004227-75004246 | Msa0472600:intron | 50.0% |
| AGAGGCTAGATTGGGCTCTA+TGG | + | chr3_3:75006401-75006420 | None:intergenic | 50.0% | |
| GCCTCTCTTCTCTAACCTTG+AGG | - | chr3_3:75006415-75006434 | Msa0472600:intron | 50.0% | |
| GGCGAAGTCGAATTCCAACA+AGG | - | chr3_3:75006475-75006494 | Msa0472600:intron | 50.0% | |
| AAGCTACTTCGGACTTGAGG+AGG | + | chr3_3:75006526-75006545 | None:intergenic | 50.0% | |
| CTTCAAAGCCTGACAAGGCA+CGG | + | chr3_3:75007980-75007999 | None:intergenic | 50.0% | |
| ! | TGTGTAATCCAAGCCGACTC+TGG | + | chr3_3:75008213-75008232 | None:intergenic | 50.0% |
| !! | CTGTGATCTTTGGTGGACTG+TGG | - | chr3_3:75009253-75009272 | Msa0472600:intron | 50.0% |
| ! | GTCTCTAGAAGTCCCAGGAA+CGG | - | chr3_3:75009356-75009375 | Msa0472600:intron | 50.0% |
| AGTGTTCGAGGTTCGAACCT+CGG | - | chr3_3:75009928-75009947 | Msa0472600:intron | 50.0% | |
| TAGGTCTCGTACCATAGGAG+AGG | + | chr3_3:75011550-75011569 | None:intergenic | 50.0% | |
| CCACATAGGTCTCGTACCAT+AGG | + | chr3_3:75011555-75011574 | None:intergenic | 50.0% | |
| CCTATGGTACGAGACCTATG+TGG | - | chr3_3:75011552-75011571 | Msa0472600:intron | 50.0% | |
| !! | AAGTGCGGTTAAGGCGTTGT+TGG | + | chr3_3:75012319-75012338 | None:intergenic | 50.0% |
| GCAGTGTTTGGTATCCTAGG+TGG | - | chr3_3:75012351-75012370 | Msa0472600:intron | 50.0% | |
| GTGTTTGGTATCCTAGGTGG+TGG | - | chr3_3:75012354-75012373 | Msa0472600:intron | 50.0% | |
| TGTTGTAGATGCCACCACCT+AGG | + | chr3_3:75012368-75012387 | None:intergenic | 50.0% | |
| GGTGGCATCTACAACATCCT+CGG | - | chr3_3:75012372-75012391 | Msa0472600:intron | 50.0% | |
| GCATCGGAGCAGGTCTATTA+TGG | - | chr3_3:75012511-75012530 | Msa0472600:intron | 50.0% | |
| ! | GGTCTATTATGGGCTGCACA+AGG | - | chr3_3:75012522-75012541 | Msa0472600:intron | 50.0% |
| ! | GCTCTAACGGATCCGTGAAA+TGG | + | chr3_3:75013663-75013682 | None:intergenic | 50.0% |
| ! | GTGCCATTGGAGACACGTTA+TGG | + | chr3_3:75014126-75014145 | None:intergenic | 50.0% |
| TGAGGTTTCCGGTGGTTGAG+TGG | + | chr3_3:75003865-75003884 | None:intergenic | 55.0% | |
| GCTCTTTCAGGAATGGGTGG+TGG | - | chr3_3:75003975-75003994 | Msa0472600:three_prime_UTR | 55.0% | |
| ! | CTTTCAGGAATGGGTGGTGG+TGG | - | chr3_3:75003978-75003997 | Msa0472600:three_prime_UTR | 55.0% |
| !! | GAGTGCGGTTAAGGCGTTGT+TGG | + | chr3_3:75004024-75004043 | None:intergenic | 55.0% |
| ! | AGGAGCACACCCCTGCATAT+TGG | - | chr3_3:75007948-75007967 | Msa0472600:intron | 55.0% |
| GGAGCACACCCCTGCATATT+GGG | - | chr3_3:75007949-75007968 | Msa0472600:intron | 55.0% | |
| ACGGCGCTTCCCAATATGCA+GGG | + | chr3_3:75007961-75007980 | None:intergenic | 55.0% | |
| ACTCTGGCCGGCAGCAAATT+TGG | + | chr3_3:75008197-75008216 | None:intergenic | 55.0% | |
| !! | AATTTGCTGCCGGCCAGAGT+CGG | - | chr3_3:75008197-75008216 | Msa0472600:intron | 55.0% |
| ! | TAATCCAAGCCGACTCTGGC+CGG | + | chr3_3:75008209-75008228 | None:intergenic | 55.0% |
| CTAGGGTGGGAGACCTCTTT+AGG | - | chr3_3:75009144-75009163 | Msa0472600:intron | 55.0% | |
| GCTCTTTCAGGAATGGGAGG+TGG | - | chr3_3:75012270-75012289 | Msa0472600:intron | 55.0% | |
| CTTTCAGGAATGGGAGGTGG+TGG | - | chr3_3:75012273-75012292 | Msa0472600:intron | 55.0% | |
| CCGTAGCAGCTTGATCACCA+CGG | + | chr3_3:75012667-75012686 | None:intergenic | 55.0% | |
| CCGTGGTGATCAAGCTGCTA+CGG | - | chr3_3:75012664-75012683 | Msa0472600:intron | 55.0% | |
| !! | TCCGGTGCTGTTCTCGGCAT+CGG | - | chr3_3:75004200-75004219 | Msa0472600:intron | 60.0% |
| TCCGATGCCGAGAACAGCAC+CGG | + | chr3_3:75004204-75004223 | None:intergenic | 60.0% | |
| CGGCGCTTCCCAATATGCAG+GGG | + | chr3_3:75007960-75007979 | None:intergenic | 60.0% | |
| CACGGCGCTTCCCAATATGC+AGG | + | chr3_3:75007962-75007981 | None:intergenic | 60.0% | |
| !! | TCTCCCACCCTAGCCTTAGG+CGG | + | chr3_3:75009137-75009156 | None:intergenic | 60.0% |
| ! | AGGTCTCCCACCCTAGCCTT+AGG | + | chr3_3:75009140-75009159 | None:intergenic | 60.0% |
| ATACGGTGCGAGGGCCACAT+AGG | + | chr3_3:75011569-75011588 | None:intergenic | 60.0% | |
| TGGCGCTGTATACGGTGCGA+GGG | + | chr3_3:75011578-75011597 | None:intergenic | 60.0% | |
| ATGGCGCTGTATACGGTGCG+AGG | + | chr3_3:75011579-75011598 | None:intergenic | 60.0% | |
| AGTGTAGGTTCGGACAGGCC+CGG | + | chr3_3:75011883-75011902 | None:intergenic | 60.0% | |
| ATAGTTGCCGGCGCCCTTCT+CGG | - | chr3_3:75012489-75012508 | Msa0472600:intron | 60.0% | |
| ACCTGCTCCGATGCCGAGAA+GGG | + | chr3_3:75012505-75012524 | None:intergenic | 60.0% | |
| ! | GCTGTTCTCGGCATCGGAGC+TGG | - | chr3_3:75004206-75004225 | Msa0472600:intron | 65.0% |
| ACGCCGCCTAAGGCTAGGGT+GGG | - | chr3_3:75009131-75009150 | Msa0472600:intron | 65.0% | |
| GACCTGCTCCGATGCCGAGA+AGG | + | chr3_3:75012506-75012525 | None:intergenic | 65.0% | |
| GTGCAGGGGCTGCAGTTGCA+TGG | - | chr3_3:75014089-75014108 | Msa0472600:CDS | 65.0% | |
| GTGCGGGGGCTGCAGTTGCA+TGG | - | chr3_3:75005407-75005426 | Msa0472600:three_prime_UTR | 70.0% | |
| !! | GGGAAGCGCCGTGCCTTGTC+AGG | - | chr3_3:75007969-75007988 | Msa0472600:intron | 70.0% |
| AGGTTCGGACAGGCCCGGTC+CGG | + | chr3_3:75011878-75011897 | None:intergenic | 70.0% | |
| ! | TCCGATGCCGAGAAGGGCGC+CGG | + | chr3_3:75012499-75012518 | None:intergenic | 70.0% |
| ! | GCCCTTCTCGGCATCGGAGC+AGG | - | chr3_3:75012501-75012520 | Msa0472600:intron | 70.0% |
| GCTGCCGGCCAGAGTCGGCT+TGG | - | chr3_3:75008202-75008221 | Msa0472600:intron | 75.0% | |
| GGTTCGGACAGGCCCGGTCC+GGG | + | chr3_3:75011877-75011896 | None:intergenic | 75.0% | |
| GCCGGCGCCCTTCTCGGCAT+CGG | - | chr3_3:75012495-75012514 | Msa0472600:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 75003831 | 75014414 | 75003831 | ID=Msa0472600;Name=Msa0472600 |
| chr3_3 | mRNA | 75003831 | 75014414 | 75003831 | ID=Msa0472600-mRNA-1;Parent=Msa0472600;Name=Msa0472600-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.25|0.11|1|0.25|0.11|9|1004|505 |
| chr3_3 | exon | 75003831 | 75004185 | 75003831 | ID=Msa0472600-mRNA-1:exon:19345;Parent=Msa0472600-mRNA-1 |
| chr3_3 | exon | 75004955 | 75005986 | 75004955 | ID=Msa0472600-mRNA-1:exon:19344;Parent=Msa0472600-mRNA-1 |
| chr3_3 | exon | 75012717 | 75012747 | 75012717 | ID=Msa0472600-mRNA-1:exon:19343;Parent=Msa0472600-mRNA-1 |
| chr3_3 | exon | 75012765 | 75012867 | 75012765 | ID=Msa0472600-mRNA-1:exon:19342;Parent=Msa0472600-mRNA-1 |
| chr3_3 | exon | 75013249 | 75013318 | 75013249 | ID=Msa0472600-mRNA-1:exon:19341;Parent=Msa0472600-mRNA-1 |
| chr3_3 | exon | 75013355 | 75013601 | 75013355 | ID=Msa0472600-mRNA-1:exon:19340;Parent=Msa0472600-mRNA-1 |
| chr3_3 | exon | 75013611 | 75013831 | 75013611 | ID=Msa0472600-mRNA-1:exon:19339;Parent=Msa0472600-mRNA-1 |
| chr3_3 | exon | 75013904 | 75014122 | 75013904 | ID=Msa0472600-mRNA-1:exon:19338;Parent=Msa0472600-mRNA-1 |
| chr3_3 | exon | 75014171 | 75014414 | 75014171 | ID=Msa0472600-mRNA-1:exon:19337;Parent=Msa0472600-mRNA-1 |
| chr3_3 | CDS | 75014171 | 75014414 | 75014171 | ID=Msa0472600-mRNA-1:cds;Parent=Msa0472600-mRNA-1 |
| chr3_3 | CDS | 75013904 | 75014122 | 75013904 | ID=Msa0472600-mRNA-1:cds;Parent=Msa0472600-mRNA-1 |
| chr3_3 | CDS | 75013611 | 75013831 | 75013611 | ID=Msa0472600-mRNA-1:cds;Parent=Msa0472600-mRNA-1 |
| chr3_3 | CDS | 75013355 | 75013601 | 75013355 | ID=Msa0472600-mRNA-1:cds;Parent=Msa0472600-mRNA-1 |
| chr3_3 | CDS | 75013249 | 75013318 | 75013249 | ID=Msa0472600-mRNA-1:cds;Parent=Msa0472600-mRNA-1 |
| chr3_3 | CDS | 75012765 | 75012867 | 75012765 | ID=Msa0472600-mRNA-1:cds;Parent=Msa0472600-mRNA-1 |
| chr3_3 | CDS | 75012717 | 75012747 | 75012717 | ID=Msa0472600-mRNA-1:cds;Parent=Msa0472600-mRNA-1 |
| chr3_3 | CDS | 75005604 | 75005986 | 75005604 | ID=Msa0472600-mRNA-1:cds;Parent=Msa0472600-mRNA-1 |
| chr3_3 | three_prime_UTR | 75004955 | 75005603 | 75004955 | ID=Msa0472600-mRNA-1:three_prime_utr;Parent=Msa0472600-mRNA-1 |
| chr3_3 | three_prime_UTR | 75003831 | 75004185 | 75003831 | ID=Msa0472600-mRNA-1:three_prime_utr;Parent=Msa0472600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
