AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1089530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1089530 MtrunA17_Chr2g0291731 91.684 950 35 2 1 907 1 949 0.0 1758
Msa1089530 MtrunA17_Chr4g0043451 49.630 270 114 5 17 269 56 320 1.61e-63 218
Msa1089530 MtrunA17_Chr1g0196911 31.619 525 330 9 354 857 620 1136 2.38e-57 215
Msa1089530 MtrunA17_Chr1g0196911 24.904 261 156 5 63 286 7 264 8.71e-15 79.3
Msa1089530 MtrunA17_Chr8g0390311 26.729 535 365 12 375 898 513 1031 2.86e-40 161
Msa1089530 MtrunA17_Chr7g0214471 30.628 382 257 4 527 903 695 1073 1.18e-38 155
Msa1089530 MtrunA17_Chr7g0214471 34.483 319 172 10 22 317 161 465 4.70e-37 150
Msa1089530 MtrunA17_Chr2g0295801 21.907 493 350 15 414 894 371 840 7.55e-16 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 125 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCTGTCACTTACAAATT+TGG 0.145905 7_3:+3125435 None:intergenic
ATCTTCTTCATCTTAAAATT+TGG 0.147104 7_3:-3125713 Msa1089530:CDS
ATTATTAATGCTTGATCTTA+TGG 0.169441 7_3:-3123664 Msa1089530:intron
CACTTACAAATTTGGATTAA+TGG 0.172353 7_3:+3125443 None:intergenic
TGAATTGATTATATCAATTT+TGG 0.173331 7_3:-3124463 Msa1089530:CDS
CTTATCTTCTTCCTGATCTT+TGG 0.195909 7_3:-3125755 Msa1089530:CDS
AGAATTCAAAGAAGAAATTT+TGG 0.203469 7_3:+3125905 None:intergenic
ATACTTAGAGTGTTGGAATT+TGG 0.207564 7_3:-3124264 Msa1089530:CDS
AGATAAGTTCTAGACAAATT+TGG 0.234041 7_3:+3125771 None:intergenic
CTACGAATAAAACAAATATT+AGG 0.244149 7_3:+3121320 None:intergenic
TTGCTTGAACTCATTGTTCT+TGG 0.257256 7_3:-3123970 Msa1089530:CDS
TCAATCTCTAATCCCTTTCT+TGG 0.261025 7_3:+3125167 None:intergenic
TTATCTTCTTCCTGATCTTT+GGG 0.276447 7_3:-3125754 Msa1089530:CDS
GCAACTAAGGGCCTTTCTTC+TGG 0.279150 7_3:+3123693 None:intergenic
GCAAAAGCACTACTCTTATT+AGG 0.281694 7_3:-3123280 Msa1089530:CDS
AATCTTCTAAGCAAAATTCT+TGG 0.282998 7_3:+3123194 None:intergenic
GAAGAAGAAGAATATCCTTT+TGG 0.289161 7_3:+3126293 None:intergenic
TCTTAAGAATTTCAAAATCT+TGG 0.293921 7_3:+3123785 None:intergenic
AGGGAATAATACTAATATTA+AGG 0.295294 7_3:+3121437 None:intergenic
AGATATTCGACAAATAAAAT+TGG 0.307802 7_3:+3121621 None:intergenic
TTGAATTGCTTCACCTTGAT+AGG 0.315513 7_3:-3123906 Msa1089530:intron
ATGTAAAAGATGAAAATTTC+AGG 0.319235 7_3:-3126133 Msa1089530:CDS
ACCAACCACTGCTGTAATAA+TGG 0.339624 7_3:+3126181 None:intergenic
GTATAGTTGATTAGTTTGAT+AGG 0.339693 7_3:-3121370 Msa1089530:three_prime_UTR
TTTCTTTCAAATGAAGTTCA+TGG 0.345089 7_3:-3125672 Msa1089530:CDS
TAATAATATCACTGCAACTA+AGG 0.362173 7_3:+3123680 None:intergenic
CAAGTCTTACAACTATTTCA+TGG 0.367986 7_3:-3122391 Msa1089530:CDS
CTTCTTCATCTCAGTTCAAA+AGG 0.368201 7_3:-3126274 Msa1089530:CDS
TGTAGTCCAAGGTATCTTAG+AGG 0.373140 7_3:-3124517 Msa1089530:CDS
GACCTAAAACTTGGCCTTGA+TGG 0.374047 7_3:+3125507 None:intergenic
AACAGATACAAGGCAGTGTT+TGG 0.375753 7_3:-3125248 Msa1089530:intron
CAAAGCTTGGTTGAACTCTC+CGG 0.377724 7_3:-3124577 Msa1089530:CDS
AACAAATATTAGGTTTCTCT+TGG 0.378045 7_3:+3121330 None:intergenic
AAATATTAGGTTTCTCTTGG+TGG 0.380549 7_3:+3121333 None:intergenic
CATCAAAACCATTGAGAAGT+TGG 0.390903 7_3:+3124175 None:intergenic
AAACAATGGCTTAAAGTTAG+TGG 0.392361 7_3:-3125564 Msa1089530:CDS
CTTCTTGATGACCTAAAACT+TGG 0.393685 7_3:+3125498 None:intergenic
ACTAATCTTCGTGACCAAAC+TGG 0.401461 7_3:-3125200 Msa1089530:CDS
CAATTGTTCCCTTGCCATCA+AGG 0.425329 7_3:-3125521 Msa1089530:CDS
TTTCTTCATTTACCTTCAAA+AGG 0.429837 7_3:-3123721 Msa1089530:CDS
AGATTCAAAGTTACCACAAA+TGG 0.439280 7_3:-3122342 Msa1089530:CDS
ATTCTCCTGCATAAGAGAAA+TGG 0.439551 7_3:+3123254 None:intergenic
AACAAATGCTCCCAAAGATC+AGG 0.441719 7_3:+3125744 None:intergenic
TCTTCTGACACAAGAGACTT+AGG 0.442706 7_3:+3126224 None:intergenic
CTTTCTACATATATTTGTAA+TGG 0.443549 7_3:-3126317 Msa1089530:CDS
CATTTGCAGTCCACGTCACT+AGG 0.444043 7_3:+3121696 None:intergenic
TTGGTGTCAAAATTCCAGTT+TGG 0.444139 7_3:+3125186 None:intergenic
AACAAATGATATCATCAGAA+TGG 0.448456 7_3:-3124296 Msa1089530:CDS
CGGAGAGTTCAACCAAGCTT+TGG 0.449630 7_3:+3124578 None:intergenic
CTTGATGGCAAGGGAACAAT+TGG 0.456206 7_3:+3125522 None:intergenic
GCAGTGGTTGGTATACTTAG+TGG 0.460876 7_3:-3126170 Msa1089530:CDS
TATATTTGTAATGGTCCAAA+AGG 0.463999 7_3:-3126308 Msa1089530:CDS
TTGATTAGTTTGATAGGGTA+GGG 0.466729 7_3:-3121364 Msa1089530:three_prime_UTR
GCGAATAGCGAATTCGCATT+CGG 0.466819 7_3:+3124608 None:intergenic
AGACTTGCACGTGCTAAACT+TGG 0.474905 7_3:+3122407 None:intergenic
ACAAATGATATCATCAGAAT+GGG 0.481504 7_3:-3124295 Msa1089530:CDS
TTCGCGTCGTTACCAAAGCT+TGG 0.483538 7_3:-3124590 Msa1089530:CDS
TAAGAAGTGCATACCTATCA+AGG 0.484606 7_3:+3123893 None:intergenic
ACTTTGAATCTTCAAGTAAG+TGG 0.485354 7_3:+3122354 None:intergenic
TTGAACTCATTGTTCTTGGA+AGG 0.486845 7_3:-3123966 Msa1089530:CDS
AAGATTGAGAAAGCCATTTG+TGG 0.489915 7_3:+3122329 None:intergenic
GGAGGCCATTTCTCTTATGC+AGG 0.490703 7_3:-3123259 Msa1089530:CDS
TTATGCAGGAGAATCATTGA+TGG 0.492867 7_3:-3123245 Msa1089530:CDS
AGGAAGAAGAAGGTGAGAGT+TGG 0.494821 7_3:-3122514 Msa1089530:CDS
GTGAGTCTTTGTTTAGAGAC+GGG 0.498056 7_3:+3121741 None:intergenic
TATAGTTGATTAGTTTGATA+GGG 0.498791 7_3:-3121369 Msa1089530:three_prime_UTR
ATAGCTTCTACAGCTTCCTT+CGG 0.500255 7_3:+3124020 None:intergenic
GCCATTGATACTTAGAGTGT+TGG 0.501193 7_3:-3124271 Msa1089530:CDS
TCCAACACTCTAAGTATCAA+TGG 0.503412 7_3:+3124270 None:intergenic
ATATATGTAGAAAGTGGTTG+TGG 0.505347 7_3:+3126326 None:intergenic
TCACACTTATTGAAATGAAA+GGG 0.507241 7_3:+3121418 None:intergenic
ATAAAACCTCTAAGATACCT+TGG 0.511591 7_3:+3124511 None:intergenic
GGTATACTTAGTGGTTACAT+AGG 0.515410 7_3:-3126161 Msa1089530:CDS
AAAAGGCTCCACCAGAAGAA+AGG 0.516639 7_3:-3123704 Msa1089530:CDS
ATCACACTTATTGAAATGAA+AGG 0.520218 7_3:+3121417 None:intergenic
AAAACTTGGCCTTGATGGCA+AGG 0.520335 7_3:+3125512 None:intergenic
ACAACAATTTCCTTGCAAGA+AGG 0.522900 7_3:+3123166 None:intergenic
CTCATGAAAAGAATTGATGA+TGG 0.523426 7_3:-3124096 Msa1089530:CDS
GCATGTGTCTTGTTCAAAAG+TGG 0.526161 7_3:-3122479 Msa1089530:CDS
AATAATATCACTGCAACTAA+GGG 0.526625 7_3:+3123681 None:intergenic
GCAAGACAAGTTCTTTCACT+TGG 0.527747 7_3:-3124132 Msa1089530:CDS
AGACAAGTTCTTTCACTTGG+TGG 0.529235 7_3:-3124129 Msa1089530:CDS
GTTGATTAGTTTGATAGGGT+AGG 0.530551 7_3:-3121365 Msa1089530:three_prime_UTR
TTGATTAAGGAGGAAGAAGA+AGG 0.532233 7_3:-3122524 Msa1089530:intron
TTCTTCATCTCAGTTCAAAA+GGG 0.535117 7_3:-3126273 Msa1089530:CDS
TGCTAAACTTGGAATGCCAT+TGG 0.536248 7_3:+3122418 None:intergenic
AGTGAGTCTTTGTTTAGAGA+CGG 0.539598 7_3:+3121740 None:intergenic
TTCTTAAGAGGACTCAAAGA+TGG 0.542035 7_3:-3123771 Msa1089530:CDS
TCCATTATTACAGCAGTGGT+TGG 0.546466 7_3:-3126182 Msa1089530:CDS
AGCTTCCATTATTACAGCAG+TGG 0.546722 7_3:-3126186 Msa1089530:CDS
TGATGGAGAGATTCATGAGA+AGG 0.547332 7_3:-3124079 Msa1089530:CDS
ATGTAAAATGCTGCAACTTG+AGG 0.547343 7_3:+3124204 None:intergenic
AAAGCTTGGTTGAACTCTCC+GGG 0.547863 7_3:-3124576 Msa1089530:CDS
GCAGGAAGATAAATATCTCA+AGG 0.551167 7_3:-3123389 Msa1089530:intron
TATTACAACTATATGTTCAT+CGG 0.551263 7_3:-3124640 Msa1089530:CDS
ACTAAGGGCCTTTCTTCTGG+TGG 0.553648 7_3:+3123696 None:intergenic
TCTGTGTATGTTTCGATGAA+CGG 0.554092 7_3:-3121597 Msa1089530:three_prime_UTR
TTACAAATATATGTAGAAAG+TGG 0.557362 7_3:+3126320 None:intergenic
AGATTCATTTCCTTCTTGCA+AGG 0.560069 7_3:-3123176 Msa1089530:CDS
GTCAATGCTTCTTCAATGAG+AGG 0.568971 7_3:+3124549 None:intergenic
ATATAGAGAAGAAGCTATTG+AGG 0.570152 7_3:-3123359 Msa1089530:CDS
CTCACAAATAGTTCTAGTTG+TGG 0.570468 7_3:+3124387 None:intergenic
TCATCTCAGTTCAAAAGGGT+AGG 0.576116 7_3:-3126269 Msa1089530:CDS
TAAGAGGACTCAAAGATGGA+TGG 0.576526 7_3:-3123767 Msa1089530:CDS
GGCAAGGGAACAATTGGAAG+AGG 0.578516 7_3:+3125528 None:intergenic
TGTGTCAGAAGATTCAAGAA+TGG 0.580254 7_3:-3126213 Msa1089530:CDS
TTGCTATGTATTATAAACAA+TGG 0.580498 7_3:-3125578 Msa1089530:CDS
TGATGAGATCTTTGTGAACA+TGG 0.581215 7_3:-3126027 Msa1089530:CDS
TCGTGTTGCATTCGAGCCGA+AGG 0.583812 7_3:-3124036 Msa1089530:CDS
CTTGCAAATTCTATAGCCAA+TGG 0.592942 7_3:-3122434 Msa1089530:CDS
GGAAGGAAACAAAATTCAAG+TGG 0.595509 7_3:-3123949 Msa1089530:CDS
TCTTTATCTATCAAAACCAA+TGG 0.600134 7_3:-3124322 Msa1089530:CDS
AAAAGAAGAAAAGATTTAGG+TGG 0.603013 7_3:-3126059 Msa1089530:CDS
ACACAATCTATTGTAGTCCA+AGG 0.607717 7_3:-3124528 Msa1089530:CDS
ATTTGCAGTCCACGTCACTA+GGG 0.610710 7_3:+3121697 None:intergenic
TTCAATGATTGTAGCAACTG+TGG 0.613085 7_3:+3122302 None:intergenic
AAACTTGGCCTTGATGGCAA+GGG 0.616412 7_3:+3125513 None:intergenic
AAAGCACTACTCTTATTAGG+AGG 0.623649 7_3:-3123277 Msa1089530:CDS
TGTTTATGACTCAATTCACA+AGG 0.624575 7_3:-3123146 Msa1089530:intron
TTGAATCTTCAAGTAAGTGG+AGG 0.627778 7_3:+3122357 None:intergenic
CAGGAAGATAAATATCTCAA+GGG 0.629457 7_3:-3123388 Msa1089530:CDS
GGACTCAAAGATGGATGGAG+TGG 0.630766 7_3:-3123762 Msa1089530:CDS
TCTTCAATGAGAGGATCACC+CGG 0.650331 7_3:+3124558 None:intergenic
GAAATCTCTCCCTAGTGACG+TGG 0.654828 7_3:-3121706 Msa1089530:CDS
AGTCTTTGTTTAGAGACGGG+AGG 0.662000 7_3:+3121744 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAAATTTATATATGTTAA+GGG - chr7_3:3122663-3122682 Msa1089530:intron 10.0%
!!! TTTAATTATGTTAATCTTTT+TGG - chr7_3:3125608-3125627 Msa1089530:CDS 10.0%
!!! TATTATGTGCTTTAAAATTT+TGG - chr7_3:3122468-3122487 Msa1089530:CDS 15.0%
!! CTTCAAATTTATATATGTTA+AGG - chr7_3:3122662-3122681 Msa1089530:intron 15.0%
!!! TGAATTGATTATATCAATTT+TGG - chr7_3:3123286-3123305 Msa1089530:CDS 15.0%
!! AATTGCATATATGAAATTAT+TGG - chr7_3:3124125-3124144 Msa1089530:CDS 15.0%
!! TAAACATCATAACTATAAAT+AGG - chr7_3:3125076-3125095 Msa1089530:intron 15.0%
!!! TTTTTGTATATGATTGATTA+AGG - chr7_3:3125212-3125231 Msa1089530:CDS 15.0%
!!! ATTAATTTTAAGTGCTAATA+TGG + chr7_3:3125639-3125658 None:intergenic 15.0%
!! TTAAAAAAATTAGACAGATT+TGG + chr7_3:3125732-3125751 None:intergenic 15.0%
!! TTCTATACATTTAAATGATT+TGG - chr7_3:3125823-3125842 Msa1089530:CDS 15.0%
!! GAAAAAAAGTTAAACTATAT+AGG + chr7_3:3125932-3125951 None:intergenic 15.0%
!! TTACAAATATATGTAGAAAG+TGG + chr7_3:3121432-3121451 None:intergenic 20.0%
!! CTTTCTACATATATTTGTAA+TGG - chr7_3:3121432-3121451 Msa1089530:three_prime_UTR 20.0%
!! ATGTAAAAGATGAAAATTTC+AGG - chr7_3:3121616-3121635 Msa1089530:three_prime_UTR 20.0%
!! AGAAAAAGAAGAAAAGATTT+AGG - chr7_3:3121687-3121706 Msa1089530:CDS 20.0%
!!! AGAATTCAAAGAAGAAATTT+TGG + chr7_3:3121847-3121866 None:intergenic 20.0%
!! ATCTTCTTCATCTTAAAATT+TGG - chr7_3:3122036-3122055 Msa1089530:intron 20.0%
!! CAAAGTTTACAATGAAAAAA+TGG - chr7_3:3122130-3122149 Msa1089530:intron 20.0%
!! TTGCTATGTATTATAAACAA+TGG - chr7_3:3122171-3122190 Msa1089530:intron 20.0%
!! GTTTGTATATCATAAAAAGA+TGG + chr7_3:3122339-3122358 None:intergenic 20.0%
!! AAGCAAAAGAATATATTTAC+CGG - chr7_3:3122393-3122412 Msa1089530:CDS 20.0%
!! GAGATTGATAAAAAAATGTA+TGG - chr7_3:3122597-3122616 Msa1089530:intron 20.0%
!! ATAGAAATATCCTATACATA+AGG - chr7_3:3122846-3122865 Msa1089530:intron 20.0%
!! TATTACAACTATATGTTCAT+CGG - chr7_3:3123109-3123128 Msa1089530:intron 20.0%
!! TCTTAAGAATTTCAAAATCT+TGG + chr7_3:3123967-3123986 None:intergenic 20.0%
!!! AAGATTTTGAAATTCTTAAG+AGG - chr7_3:3123966-3123985 Msa1089530:CDS 20.0%
!! ATTATTAATGCTTGATCTTA+TGG - chr7_3:3124085-3124104 Msa1089530:CDS 20.0%
!!! CCAATTTTGTTTGATAATTA+TGG + chr7_3:3124705-3124724 None:intergenic 20.0%
!! CCATAATTATCAAACAAAAT+TGG - chr7_3:3124702-3124721 Msa1089530:CDS 20.0%
!!! TTACCATTTTACAAATATCT+CGG - chr7_3:3124758-3124777 Msa1089530:intron 20.0%
!! TTGTATCTTACAAAAAATTC+AGG - chr7_3:3125516-3125535 Msa1089530:CDS 20.0%
!! AGATATTCGACAAATAAAAT+TGG + chr7_3:3126131-3126150 None:intergenic 20.0%
!! AGGGAATAATACTAATATTA+AGG + chr7_3:3126315-3126334 None:intergenic 20.0%
!!! TATAGTTGATTAGTTTGATA+GGG - chr7_3:3126380-3126399 Msa1089530:five_prime_UTR 20.0%
!! CTACGAATAAAACAAATATT+AGG + chr7_3:3126432-3126451 None:intergenic 20.0%
! ACACAATCATAAAAAACACA+TGG - chr7_3:3121377-3121396 Msa1089530:three_prime_UTR 25.0%
! TATATTTGTAATGGTCCAAA+AGG - chr7_3:3121441-3121460 Msa1089530:three_prime_UTR 25.0%
!!! AGAGAAATGCAATTCTTTTT+TGG - chr7_3:3121650-3121669 Msa1089530:CDS 25.0%
! AAAAGAAGAAAAGATTTAGG+TGG - chr7_3:3121690-3121709 Msa1089530:CDS 25.0%
!!! AGATAAGTTCTAGACAAATT+TGG + chr7_3:3121981-3122000 None:intergenic 25.0%
!!! ATTTTAAGATGAAGAAGATG+AGG + chr7_3:3122035-3122054 None:intergenic 25.0%
! TTTCTTTCAAATGAAGTTCA+TGG - chr7_3:3122077-3122096 Msa1089530:intron 25.0%
! TACAATGAAAAAATGGATAG+TGG - chr7_3:3122137-3122156 Msa1089530:intron 25.0%
! CACTTACAAATTTGGATTAA+TGG + chr7_3:3122309-3122328 None:intergenic 25.0%
!!! TTTTTTTTGCAACAGATACA+AGG - chr7_3:3122491-3122510 Msa1089530:CDS 25.0%
! ACAGATAAGTAAATCCAAAT+AGG + chr7_3:3122689-3122708 None:intergenic 25.0%
! GTATATAAGTCCTTATGTAT+AGG + chr7_3:3122859-3122878 None:intergenic 25.0%
!!! GAGCTTTATTCTTATCAATT+TGG + chr7_3:3122962-3122981 None:intergenic 25.0%
!!! AATATAGTTGACTTTTGACA+TGG + chr7_3:3123039-3123058 None:intergenic 25.0%
!! TTTTGGCAGAATTAATAACA+AGG - chr7_3:3123303-3123322 Msa1089530:CDS 25.0%
! TCTTTATCTATCAAAACCAA+TGG - chr7_3:3123427-3123446 Msa1089530:intron 25.0%
! AACAAATGATATCATCAGAA+TGG - chr7_3:3123453-3123472 Msa1089530:intron 25.0%
! ACAAATGATATCATCAGAAT+GGG - chr7_3:3123454-3123473 Msa1089530:intron 25.0%
! TTTCTTCATTTACCTTCAAA+AGG - chr7_3:3124028-3124047 Msa1089530:CDS 25.0%
! AATAATATCACTGCAACTAA+GGG + chr7_3:3124071-3124090 None:intergenic 25.0%
! TAATAATATCACTGCAACTA+AGG + chr7_3:3124072-3124091 None:intergenic 25.0%
!! TTTAGAACTCCTACATTTAT+AGG - chr7_3:3124200-3124219 Msa1089530:CDS 25.0%
! TAACATTTGCCTATAAATGT+AGG + chr7_3:3124212-3124231 None:intergenic 25.0%
! AATCTTCTAAGCAAAATTCT+TGG + chr7_3:3124558-3124577 None:intergenic 25.0%
!! TTTATTTCTTTAAGTCTACG+AGG + chr7_3:3124843-3124862 None:intergenic 25.0%
! TATTTCAATTATGTAAGTCG+AGG - chr7_3:3124895-3124914 Msa1089530:intron 25.0%
! ATTTCAATTATGTAAGTCGA+GGG - chr7_3:3124896-3124915 Msa1089530:intron 25.0%
!!! TAATTTTCGAGTGCTATAAA+GGG + chr7_3:3125183-3125202 None:intergenic 25.0%
!!! ATAATTTTCGAGTGCTATAA+AGG + chr7_3:3125184-3125203 None:intergenic 25.0%
! TTGTATATGATTGATTAAGG+AGG - chr7_3:3125215-3125234 Msa1089530:CDS 25.0%
!!! TTTTTTTCCTTGTAAGAAAG+TGG - chr7_3:3125694-3125713 Msa1089530:CDS 25.0%
! CTAGTACAAAAGTTAAAGTT+TGG + chr7_3:3125782-3125801 None:intergenic 25.0%
!! ACTTTTGTACTAGAAATTTG+TGG - chr7_3:3125789-3125808 Msa1089530:CDS 25.0%
! TCACACTTATTGAAATGAAA+GGG + chr7_3:3126334-3126353 None:intergenic 25.0%
! ATCACACTTATTGAAATGAA+AGG + chr7_3:3126335-3126354 None:intergenic 25.0%
!!! GTATAGTTGATTAGTTTGAT+AGG - chr7_3:3126379-3126398 Msa1089530:five_prime_UTR 25.0%
! AACAAATATTAGGTTTCTCT+TGG + chr7_3:3126422-3126441 None:intergenic 25.0%
ATATATGTAGAAAGTGGTTG+TGG + chr7_3:3121426-3121445 None:intergenic 30.0%
! GAAGAAGAAGAATATCCTTT+TGG + chr7_3:3121459-3121478 None:intergenic 30.0%
TTCTTCATCTCAGTTCAAAA+GGG - chr7_3:3121476-3121495 Msa1089530:three_prime_UTR 30.0%
TTATCTTCTTCCTGATCTTT+GGG - chr7_3:3121995-3122014 Msa1089530:intron 30.0%
AAACAATGGCTTAAAGTTAG+TGG - chr7_3:3122185-3122204 Msa1089530:intron 30.0%
! AAAAGTACATGTATCTTGTC+CGG + chr7_3:3122415-3122434 None:intergenic 30.0%
TTATAGATGCAGTTCAATTC+AGG - chr7_3:3122626-3122645 Msa1089530:intron 30.0%
ATATATGTTAAGGGCCTATT+TGG - chr7_3:3122672-3122691 Msa1089530:intron 30.0%
ACAACTTATAGACATGTCAT+AGG + chr7_3:3122734-3122753 None:intergenic 30.0%
! AAAGGAGACAGAAAATCTTT+TGG - chr7_3:3122924-3122943 Msa1089530:intron 30.0%
ACTGAAAATAGTCCAATCTT+TGG + chr7_3:3122986-3123005 None:intergenic 30.0%
!! ATAAAACCTCTAAGATACCT+TGG + chr7_3:3123241-3123260 None:intergenic 30.0%
!!! AAGCACTAGTCTTTTTCTTA+AGG - chr7_3:3123394-3123413 Msa1089530:intron 30.0%
!!! GATATCATTTGTTTTGCCAT+TGG + chr7_3:3123446-3123465 None:intergenic 30.0%
!! ATACTTAGAGTGTTGGAATT+TGG - chr7_3:3123485-3123504 Msa1089530:intron 30.0%
! AGTTGCAGCATTTTACATTT+TGG - chr7_3:3123550-3123569 Msa1089530:intron 30.0%
CTCATGAAAAGAATTGATGA+TGG - chr7_3:3123653-3123672 Msa1089530:intron 30.0%
!!! GTTTTGAAAAACACAACAGA+AGG - chr7_3:3123940-3123959 Msa1089530:CDS 30.0%
GGCAAATGTTAATAAGTTAG+TGG - chr7_3:3124221-3124240 Msa1089530:CDS 30.0%
! TAGTGGTTATGTTAGTTTCT+AGG - chr7_3:3124238-3124257 Msa1089530:CDS 30.0%
! AGTGGTTATGTTAGTTTCTA+GGG - chr7_3:3124239-3124258 Msa1089530:CDS 30.0%
!! TTATGTTAGTTTCTAGGGTT+CGG - chr7_3:3124244-3124263 Msa1089530:CDS 30.0%
TAAAGAGTTTCAAACATGAC+CGG + chr7_3:3124281-3124300 None:intergenic 30.0%
CAGGAAGATAAATATCTCAA+GGG - chr7_3:3124361-3124380 Msa1089530:CDS 30.0%
ATATAGAGAAGAAGCTATTG+AGG - chr7_3:3124390-3124409 Msa1089530:CDS 30.0%
!! AATTTGCTTTTGCAAAAAGC+TGG - chr7_3:3124529-3124548 Msa1089530:CDS 30.0%
TGTTTATGACTCAATTCACA+AGG - chr7_3:3124603-3124622 Msa1089530:CDS 30.0%
TCAATTCACAAGGTATGATT+TGG - chr7_3:3124613-3124632 Msa1089530:CDS 30.0%
! ACCTTGTTATCTCAAAAACA+GGG + chr7_3:3124796-3124815 None:intergenic 30.0%
CAAGTCTTACAACTATTTCA+TGG - chr7_3:3125358-3125377 Msa1089530:intron 30.0%
ACTTTGAATCTTCAAGTAAG+TGG + chr7_3:3125398-3125417 None:intergenic 30.0%
AGATTCAAAGTTACCACAAA+TGG - chr7_3:3125407-3125426 Msa1089530:intron 30.0%
AATCAAGAACTAATGTGACT+TGG - chr7_3:3125666-3125685 Msa1089530:CDS 30.0%
ACAAAAGTTAAAGTTTGGCA+TGG + chr7_3:3125777-3125796 None:intergenic 30.0%
! TAAATGATTTGGCATCATAG+AGG - chr7_3:3125834-3125853 Msa1089530:CDS 30.0%
AGAGGCTTTCAATAAAGATA+TGG - chr7_3:3125852-3125871 Msa1089530:CDS 30.0%
TAATATGTCATATTGCTAGC+AGG - chr7_3:3125970-3125989 Msa1089530:CDS 30.0%
!! TTGATTAGTTTGATAGGGTA+GGG - chr7_3:3126385-3126404 Msa1089530:five_prime_UTR 30.0%
AAATATTAGGTTTCTCTTGG+TGG + chr7_3:3126419-3126438 None:intergenic 30.0%
!!! GATTTTGAAGCATGAAGAAG+AGG + chr7_3:3121346-3121365 None:intergenic 35.0%
CTTCTTCATCTCAGTTCAAA+AGG - chr7_3:3121475-3121494 Msa1089530:three_prime_UTR 35.0%
TGTGTCAGAAGATTCAAGAA+TGG - chr7_3:3121536-3121555 Msa1089530:three_prime_UTR 35.0%
GGTATACTTAGTGGTTACAT+AGG - chr7_3:3121588-3121607 Msa1089530:three_prime_UTR 35.0%
TGATGAGATCTTTGTGAACA+TGG - chr7_3:3121722-3121741 Msa1089530:CDS 35.0%
CTTATCTTCTTCCTGATCTT+TGG - chr7_3:3121994-3122013 Msa1089530:intron 35.0%
! CTTCTTGATGACCTAAAACT+TGG + chr7_3:3122254-3122273 None:intergenic 35.0%
! GTTGCTGTCACTTACAAATT+TGG + chr7_3:3122317-3122336 None:intergenic 35.0%
TGCTTATATTTCGTTCCAGA+GGG + chr7_3:3122378-3122397 None:intergenic 35.0%
TTGCTTATATTTCGTTCCAG+AGG + chr7_3:3122379-3122398 None:intergenic 35.0%
!! ATTTTTGCTGCTCTTGTTTG+AGG + chr7_3:3122527-3122546 None:intergenic 35.0%
!! TTGGTGTCAAAATTCCAGTT+TGG + chr7_3:3122566-3122585 None:intergenic 35.0%
!! TGGAATTTTGACACCAAGAA+AGG - chr7_3:3122569-3122588 Msa1089530:intron 35.0%
!! GGAATTTTGACACCAAGAAA+GGG - chr7_3:3122570-3122589 Msa1089530:intron 35.0%
TCAATCTCTAATCCCTTTCT+TGG + chr7_3:3122585-3122604 None:intergenic 35.0%
! TATCTGTTTGTCAGAGCTTT+TGG - chr7_3:3122702-3122721 Msa1089530:intron 35.0%
GAATAAAGCTCACCAAAGAT+TGG - chr7_3:3122971-3122990 Msa1089530:intron 35.0%
! ACTTTTGACATGGTTTCTGT+TGG + chr7_3:3123029-3123048 None:intergenic 35.0%
ACACAATCTATTGTAGTCCA+AGG - chr7_3:3123221-3123240 Msa1089530:CDS 35.0%
!! CTCACAAATAGTTCTAGTTG+TGG + chr7_3:3123365-3123384 None:intergenic 35.0%
TCCAACACTCTAAGTATCAA+TGG + chr7_3:3123482-3123501 None:intergenic 35.0%
ATGTAAAATGCTGCAACTTG+AGG + chr7_3:3123548-3123567 None:intergenic 35.0%
! ATTTTGGACCAACTTCTCAA+TGG - chr7_3:3123566-3123585 Msa1089530:intron 35.0%
CATCAAAACCATTGAGAAGT+TGG + chr7_3:3123577-3123596 None:intergenic 35.0%
TTGCTTGAACTCATTGTTCT+TGG - chr7_3:3123779-3123798 Msa1089530:CDS 35.0%
TTGAACTCATTGTTCTTGGA+AGG - chr7_3:3123783-3123802 Msa1089530:CDS 35.0%
GGAAGGAAACAAAATTCAAG+TGG - chr7_3:3123800-3123819 Msa1089530:intron 35.0%
TTGAATTGCTTCACCTTGAT+AGG - chr7_3:3123843-3123862 Msa1089530:intron 35.0%
! TAAGAAGTGCATACCTATCA+AGG + chr7_3:3123859-3123878 None:intergenic 35.0%
TTCTTAAGAGGACTCAAAGA+TGG - chr7_3:3123978-3123997 Msa1089530:CDS 35.0%
GCAGGAAGATAAATATCTCA+AGG - chr7_3:3124360-3124379 Msa1089530:CDS 35.0%
!! GCAAAAGCACTACTCTTATT+AGG - chr7_3:3124469-3124488 Msa1089530:CDS 35.0%
! AAAGCACTACTCTTATTAGG+AGG - chr7_3:3124472-3124491 Msa1089530:CDS 35.0%
ATTCTCCTGCATAAGAGAAA+TGG + chr7_3:3124498-3124517 None:intergenic 35.0%
TTATGCAGGAGAATCATTGA+TGG - chr7_3:3124504-3124523 Msa1089530:CDS 35.0%
AGATTCATTTCCTTCTTGCA+AGG - chr7_3:3124573-3124592 Msa1089530:CDS 35.0%
ACAACAATTTCCTTGCAAGA+AGG + chr7_3:3124586-3124605 None:intergenic 35.0%
CGTCCGAGATATTTGTAAAA+TGG + chr7_3:3124764-3124783 None:intergenic 35.0%
!!! ACCCTGTTTTTGAGATAACA+AGG - chr7_3:3124792-3124811 Msa1089530:intron 35.0%
! GACCTTGTTATCTCAAAAAC+AGG + chr7_3:3124797-3124816 None:intergenic 35.0%
TTGATTAAGGAGGAAGAAGA+AGG - chr7_3:3125225-3125244 Msa1089530:CDS 35.0%
CTTGCAAATTCTATAGCCAA+TGG - chr7_3:3125315-3125334 Msa1089530:intron 35.0%
TTGAATCTTCAAGTAAGTGG+AGG + chr7_3:3125395-3125414 None:intergenic 35.0%
AAGATTGAGAAAGCCATTTG+TGG + chr7_3:3125423-3125442 None:intergenic 35.0%
TTCAATGATTGTAGCAACTG+TGG + chr7_3:3125450-3125469 None:intergenic 35.0%
!! CAAATTGCCACTTTCTTACA+AGG + chr7_3:3125704-3125723 None:intergenic 35.0%
TGTAAGAAAGTGGCAATTTG+AGG - chr7_3:3125704-3125723 Msa1089530:CDS 35.0%
! AGTGAGTCTTTGTTTAGAGA+CGG + chr7_3:3126012-3126031 None:intergenic 35.0%
TCTGTGTATGTTTCGATGAA+CGG - chr7_3:3126152-3126171 Msa1089530:CDS 35.0%
!! GTTGATTAGTTTGATAGGGT+AGG - chr7_3:3126384-3126403 Msa1089530:five_prime_UTR 35.0%
TCATCTCAGTTCAAAAGGGT+AGG - chr7_3:3121480-3121499 Msa1089530:three_prime_UTR 40.0%
TCTTCTGACACAAGAGACTT+AGG + chr7_3:3121528-3121547 None:intergenic 40.0%
AGCTTCCATTATTACAGCAG+TGG - chr7_3:3121563-3121582 Msa1089530:three_prime_UTR 40.0%
TCCATTATTACAGCAGTGGT+TGG - chr7_3:3121567-3121586 Msa1089530:three_prime_UTR 40.0%
ACCAACCACTGCTGTAATAA+TGG + chr7_3:3121571-3121590 None:intergenic 40.0%
AACAAATGCTCCCAAAGATC+AGG + chr7_3:3122008-3122027 None:intergenic 40.0%
TGTGTATATAGTACTCCCTC+TGG - chr7_3:3122360-3122379 Msa1089530:CDS 40.0%
AACAGATACAAGGCAGTGTT+TGG - chr7_3:3122501-3122520 Msa1089530:CDS 40.0%
ACTAATCTTCGTGACCAAAC+TGG - chr7_3:3122549-3122568 Msa1089530:intron 40.0%
CTTTCTGTCACAAGTGAGAA+AGG + chr7_3:3122908-3122927 None:intergenic 40.0%
CTTTCTCACTTGTGACAGAA+AGG - chr7_3:3122906-3122925 Msa1089530:intron 40.0%
! ATTTTCAGTGCTTGTCTTGC+AGG - chr7_3:3122997-3123016 Msa1089530:intron 40.0%
GTCAATGCTTCTTCAATGAG+AGG + chr7_3:3123203-3123222 None:intergenic 40.0%
! TGTAGTCCAAGGTATCTTAG+AGG - chr7_3:3123232-3123251 Msa1089530:CDS 40.0%
GCCATTGATACTTAGAGTGT+TGG - chr7_3:3123478-3123497 Msa1089530:intron 40.0%
GCAAGACAAGTTCTTTCACT+TGG - chr7_3:3123617-3123636 Msa1089530:intron 40.0%
AGACAAGTTCTTTCACTTGG+TGG - chr7_3:3123620-3123639 Msa1089530:intron 40.0%
TGATGGAGAGATTCATGAGA+AGG - chr7_3:3123670-3123689 Msa1089530:CDS 40.0%
ATAGCTTCTACAGCTTCCTT+CGG + chr7_3:3123732-3123751 None:intergenic 40.0%
TAAGAGGACTCAAAGATGGA+TGG - chr7_3:3123982-3124001 Msa1089530:CDS 40.0%
GAGTTCTCAAGTTAAGTCTC+GGG + chr7_3:3124966-3124985 None:intergenic 40.0%
GGAGTTCTCAAGTTAAGTCT+CGG + chr7_3:3124967-3124986 None:intergenic 40.0%
AAGGTGAGAGTTGGCAAAAA+AGG - chr7_3:3125244-3125263 Msa1089530:CDS 40.0%
AGGTGAGAGTTGGCAAAAAA+GGG - chr7_3:3125245-3125264 Msa1089530:CDS 40.0%
! GCATGTGTCTTGTTCAAAAG+TGG - chr7_3:3125270-3125289 Msa1089530:intron 40.0%
TGCTAAACTTGGAATGCCAT+TGG + chr7_3:3125334-3125353 None:intergenic 40.0%
! GTGAGTCTTTGTTTAGAGAC+GGG + chr7_3:3126011-3126030 None:intergenic 40.0%
! GCAGTGGTTGGTATACTTAG+TGG - chr7_3:3121579-3121598 Msa1089530:three_prime_UTR 45.0%
! CTTGATGGCAAGGGAACAAT+TGG + chr7_3:3122230-3122249 None:intergenic 45.0%
CAATTGTTCCCTTGCCATCA+AGG - chr7_3:3122228-3122247 Msa1089530:intron 45.0%
!! AAACTTGGCCTTGATGGCAA+GGG + chr7_3:3122239-3122258 None:intergenic 45.0%
!! AAAACTTGGCCTTGATGGCA+AGG + chr7_3:3122240-3122259 None:intergenic 45.0%
! TGCCATCAAGGCCAAGTTTT+AGG - chr7_3:3122240-3122259 Msa1089530:CDS 45.0%
!! GACCTAAAACTTGGCCTTGA+TGG + chr7_3:3122245-3122264 None:intergenic 45.0%
GCGAATAGCGAATTCGCATT+CGG + chr7_3:3123144-3123163 None:intergenic 45.0%
CAAAGCTTGGTTGAACTCTC+CGG - chr7_3:3123172-3123191 Msa1089530:CDS 45.0%
AAAGCTTGGTTGAACTCTCC+GGG - chr7_3:3123173-3123192 Msa1089530:CDS 45.0%
TCTTCAATGAGAGGATCACC+CGG + chr7_3:3123194-3123213 None:intergenic 45.0%
AAAAGGCTCCACCAGAAGAA+AGG - chr7_3:3124045-3124064 Msa1089530:CDS 45.0%
CAAACATGACCGGAGGTTTA+GGG + chr7_3:3124271-3124290 None:intergenic 45.0%
TCAAACATGACCGGAGGTTT+AGG + chr7_3:3124272-3124291 None:intergenic 45.0%
AGAGTTTCAAACATGACCGG+AGG + chr7_3:3124278-3124297 None:intergenic 45.0%
TGCAATAGCAGATGTGTTGC+AGG - chr7_3:3124342-3124361 Msa1089530:CDS 45.0%
GAAAATCCTACCAAGTAGCG+AGG + chr7_3:3124988-3125007 None:intergenic 45.0%
AGGAAGAAGAAGGTGAGAGT+TGG - chr7_3:3125235-3125254 Msa1089530:CDS 45.0%
AGACTTGCACGTGCTAAACT+TGG + chr7_3:3125345-3125364 None:intergenic 45.0%
! AGTCTTTGTTTAGAGACGGG+AGG + chr7_3:3126008-3126027 None:intergenic 45.0%
ATTTGCAGTCCACGTCACTA+GGG + chr7_3:3126055-3126074 None:intergenic 45.0%
GGCAAGGGAACAATTGGAAG+AGG + chr7_3:3122224-3122243 None:intergenic 50.0%
TTCGCGTCGTTACCAAAGCT+TGG - chr7_3:3123159-3123178 Msa1089530:CDS 50.0%
CGGAGAGTTCAACCAAGCTT+TGG + chr7_3:3123174-3123193 None:intergenic 50.0%
GGACTCAAAGATGGATGGAG+TGG - chr7_3:3123987-3124006 Msa1089530:CDS 50.0%
! CTTCTGGTGGAGCCTTTTGA+AGG + chr7_3:3124043-3124062 None:intergenic 50.0%
ACTAAGGGCCTTTCTTCTGG+TGG + chr7_3:3124056-3124075 None:intergenic 50.0%
GCAACTAAGGGCCTTTCTTC+TGG + chr7_3:3124059-3124078 None:intergenic 50.0%
GGAGGCCATTTCTCTTATGC+AGG - chr7_3:3124490-3124509 Msa1089530:CDS 50.0%
CTTGAGAACTCCTCGCTACT+TGG - chr7_3:3124975-3124994 Msa1089530:intron 50.0%
AGAACTCCTCGCTACTTGGT+AGG - chr7_3:3124979-3124998 Msa1089530:intron 50.0%
GAAATCTCTCCCTAGTGACG+TGG - chr7_3:3126043-3126062 Msa1089530:CDS 50.0%
CATTTGCAGTCCACGTCACT+AGG + chr7_3:3126056-3126075 None:intergenic 50.0%
TCGTGTTGCATTCGAGCCGA+AGG - chr7_3:3123713-3123732 Msa1089530:CDS 55.0%
GGGTTCGGACCCTAAACCTC+CGG - chr7_3:3124259-3124278 Msa1089530:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 3121286 3126485 3121286 ID=Msa1089530;Name=Msa1089530
chr7_3 mRNA 3121286 3126485 3121286 ID=Msa1089530-mRNA-1;Parent=Msa1089530;Name=Msa1089530-mRNA-1;_AED=0.03;_eAED=0.03;_QI=110|0.83|0.85|1|0.83|0.85|7|363|907
chr7_3 exon 3121286 3121779 3121286 ID=Msa1089530-mRNA-1:exon:1234;Parent=Msa1089530-mRNA-1
chr7_3 exon 3122234 3122537 3122234 ID=Msa1089530-mRNA-1:exon:1233;Parent=Msa1089530-mRNA-1
chr7_3 exon 3123147 3123407 3123147 ID=Msa1089530-mRNA-1:exon:1232;Parent=Msa1089530-mRNA-1
chr7_3 exon 3123665 3123812 3123665 ID=Msa1089530-mRNA-1:exon:1231;Parent=Msa1089530-mRNA-1
chr7_3 exon 3123907 3124752 3123907 ID=Msa1089530-mRNA-1:exon:1230;Parent=Msa1089530-mRNA-1
chr7_3 exon 3125158 3125265 3125158 ID=Msa1089530-mRNA-1:exon:1229;Parent=Msa1089530-mRNA-1
chr7_3 exon 3125450 3126485 3125450 ID=Msa1089530-mRNA-1:exon:1228;Parent=Msa1089530-mRNA-1
chr7_3 five_prime_UTR 3126376 3126485 3126376 ID=Msa1089530-mRNA-1:five_prime_utr;Parent=Msa1089530-mRNA-1
chr7_3 CDS 3125450 3126375 3125450 ID=Msa1089530-mRNA-1:cds;Parent=Msa1089530-mRNA-1
chr7_3 CDS 3125158 3125265 3125158 ID=Msa1089530-mRNA-1:cds;Parent=Msa1089530-mRNA-1
chr7_3 CDS 3123907 3124752 3123907 ID=Msa1089530-mRNA-1:cds;Parent=Msa1089530-mRNA-1
chr7_3 CDS 3123665 3123812 3123665 ID=Msa1089530-mRNA-1:cds;Parent=Msa1089530-mRNA-1
chr7_3 CDS 3123147 3123407 3123147 ID=Msa1089530-mRNA-1:cds;Parent=Msa1089530-mRNA-1
chr7_3 CDS 3122234 3122537 3122234 ID=Msa1089530-mRNA-1:cds;Parent=Msa1089530-mRNA-1
chr7_3 CDS 3121649 3121779 3121649 ID=Msa1089530-mRNA-1:cds;Parent=Msa1089530-mRNA-1
chr7_3 three_prime_UTR 3121286 3121648 3121286 ID=Msa1089530-mRNA-1:three_prime_utr;Parent=Msa1089530-mRNA-1
Gene Sequence

>Msa1089530

ATGGCTTCTTCACAACAGCATAAACTTCCACAACCACTTTCTACATATATTTGTAATGGTCCAAAAGGATATTCTTCTTCTTCTTCATCTCAGTTCAAAAGGGTAGGTTCTACTTCAGAAAGATCAAATCCTAAGTCTCTTGTGTCAGAAGATTCAAGAATGGATGAAGCTTCCATTATTACAGCAGTGGTTGGTATACTTAGTGGTTACATAGGAAGATATGTAAAAGATGAAAATTTCAGGAGAATCATAAGAGAGAAATGCAATTCTTTTTTGGATAGAATAAGAACAAGAAAAAGAAGAAAAGATTTAGGTGGTGATGATGATGATGAGATCTTTGTGAACATGGAATTTTGTATGAAGAAAATTGATAAACTGATAGAAGATCAAAGAACAAAGAAACAAGTTACAATGATGAAAAGTTTAAGAAATTCTATTGAGCTTTTAACCAAAATTTCTTCTTTGAATTCTTCTAAATCTTATCTCTCATCTTTTGCTCATCTTTACTTAGCAATAGCTTACAAGCTACACAAAAATGATAGAGTTTCTTCAAAGCATTTACTTCAAGTGTTTTGTTATTCTCCAAATTTGTCTAGAACTTATCTTCTTCCTGATCTTTGGGAGCATTTGTTTCTTCCTCATCTTCTTCATCTTAAAATTTGGTATAATAGTGAGTTTGAGTTTCTTTCAAATGAAGTTCATGGTGAGAAAGAAAAGAAAATCAAAGTTTTGAACAAAGTTTACAATGAAAAAATGGATAGTGGAACTTATCTTTTTGCTATGTATTATAAACAATGGCTTAAAGTTAGTGGTGCTAGTGAGCTTCCTCTTCCAATTGTTCCCTTGCCATCAAGGCCAAGTTTTAGGTCATCAAGAAGAATGTCTTCAGATTCTTCTATTTCAAATTCTTCCATTAATCCAAATTTATACAAGGCAGTGTTTGGCCTCAAACAAGAGCAGCAAAAATCTACTAATCTTCGTGACCAAACTGGAATTTTGACACCAAGAAAGGGATTAGAGATTGATAAAAAAATGTTCATACCAACAGAAACCATGTCAAAAGTCAACTATATTAAATCTAAGAATGCTTCTTCAAGTGTTCTTTCAAGTGACTTAGTTGAAGCTATTACAACTATATGTTCATCGGATATTCTAACCGAATGCGAATTCGCTATTCGCGTCGTTACCAAAGCTTGGTTGAACTCTCCGGGTGATCCTCTCATTGAAGAAGCATTGACACAATCTATTGTAGTCCAAGGTATCTTAGAGGTTTTATTCGTCTCGACTGAAGACGAAATTCTTGAATTGATTATATCAATTTTGGCAGAATTAATAACAAGGAATGATTCAATTAGACAAATAATACTAAATTCTGATCCACAACTAGAACTATTTGTGAGACTTTTAAGAAGCACTAGTCTTTTTCTTAAGGCTTCAGTGCTTCTTTATCTATCAAAACCAATGGCAAAACAAATGATATCATCAGAATGGGTGCCATTGATACTTAGAGTGTTGGAATTTGGAGACAAATTGCAGACACTTTTCACAGTACAATGTAGTCCTCAAGTTGCAGCATTTTACATTTTGGACCAACTTCTCAATGGTTTTGATGAAGATAAGAATTTAGAGAATGCAAGACAAGTTCTTTCACTTGGTGGATTGACACTTCTCATGAAAAGAATTGATGATGGAGAGATTCATGAGAAGGAGAATTCTGCTTCAATTATTTCGTGTTGCATTCGAGCCGAAGGAAGCTGTAGAAGCTATTTAGCTGAGAATATTAACAAGAGTTCATTGCTTGAACTCATTGTTCTTGGAAGGAAACAAAATTCAAGTGGTTATGCATTGTCTTTGCTATTTGAATTGCTTCACCTTGATAGAAGGACCAAGATTTTGAAATTCTTAAGAGGACTCAAAGATGGATGGAGTGGCTTAAACACACTGCACATTTTCTTCATTTACCTTCAAAAGGCTCCACCAGAAGAAAGGCCCTTAGTTGCAGTGATATTATTAATGCTTGATCTTATGGAAGATAAATATCTCAAGGGTAGCATATATAGAGAAGAAGCTATTGAGGCAATTGTAGCTGCTTTAAATTGTCAAATGTGTGATGATAGAGTTCAACAGCAATCAGCAAAAGCACTACTCTTATTAGGAGGCCATTTCTCTTATGCAGGAGAATCATTGATGGAAAATTTGCTTTTGCAAAAAGCTGGTTTCCAAGAATTTTGCTTAGAAGATTCATTTCCTTCTTGCAAGGAAATTGTTGTTTATGACTCAATTCACAAGGAGGAAGAAGAAGGTGAGAGTTGGCAAAAAAGGGCAGCATGTGTCTTGTTCAAAAGTGGAAATAAGAGATTGCTATCTGCACTTGCAAATTCTATAGCCAATGGCATTCCAAGTTTAGCACGTGCAAGTCTTACAACTATTTCATGGATGTGTAGCTACCTCCACTTACTTGAAGATTCAAAGTTACCACAAATGGCTTTCTCAATCTTAACGCCACAGTTGCTACAATCATTGAATTATGATAATGATGTTGAAGAAAGAGTTCTAGCTTCATATTCTTTGTTGTATCTTACAAAAAATTCAGGATGTGACTCTATCCTCCCGTCTCTAAACAAAGACTCACTCACACATCTCAGAAATCTCTCCCTAGTGACGTGGACTGCAAATGAGCTTATCTCAATATTCTCAAAAAGAAGCATGCAATCAAAACAATAA

Protein sequence

>Msa1089530

MASSQQHKLPQPLSTYICNGPKGYSSSSSSQFKRVGSTSERSNPKSLVSEDSRMDEASIITAVVGILSGYIGRYVKDENFRRIIREKCNSFLDRIRTRKRRKDLGGDDDDEIFVNMEFCMKKIDKLIEDQRTKKQVTMMKSLRNSIELLTKISSLNSSKSYLSSFAHLYLAIAYKLHKNDRVSSKHLLQVFCYSPNLSRTYLLPDLWEHLFLPHLLHLKIWYNSEFEFLSNEVHGEKEKKIKVLNKVYNEKMDSGTYLFAMYYKQWLKVSGASELPLPIVPLPSRPSFRSSRRMSSDSSISNSSINPNLYKAVFGLKQEQQKSTNLRDQTGILTPRKGLEIDKKMFIPTETMSKVNYIKSKNASSSVLSSDLVEAITTICSSDILTECEFAIRVVTKAWLNSPGDPLIEEALTQSIVVQGILEVLFVSTEDEILELIISILAELITRNDSIRQIILNSDPQLELFVRLLRSTSLFLKASVLLYLSKPMAKQMISSEWVPLILRVLEFGDKLQTLFTVQCSPQVAAFYILDQLLNGFDEDKNLENARQVLSLGGLTLLMKRIDDGEIHEKENSASIISCCIRAEGSCRSYLAENINKSSLLELIVLGRKQNSSGYALSLLFELLHLDRRTKILKFLRGLKDGWSGLNTLHIFFIYLQKAPPEERPLVAVILLMLDLMEDKYLKGSIYREEAIEAIVAALNCQMCDDRVQQQSAKALLLLGGHFSYAGESLMENLLLQKAGFQEFCLEDSFPSCKEIVVYDSIHKEEEEGESWQKRAACVLFKSGNKRLLSALANSIANGIPSLARASLTTISWMCSYLHLLEDSKLPQMAFSILTPQLLQSLNYDNDVEERVLASYSLLYLTKNSGCDSILPSLNKDSLTHLRNLSLVTWTANELISIFSKRSMQSKQ*