Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473570 | XP_003602519.1 | 100.000 | 245 | 0 | 0 | 1 | 245 | 1 | 245 | 1.84e-171 | 482 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473570 | sp|Q99JH1|RP25L_MOUSE | 35.294 | 136 | 79 | 3 | 1 | 127 | 1 | 136 | 6.24e-18 | 81.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473570 | G7JAD8 | 100.000 | 245 | 0 | 0 | 1 | 245 | 1 | 245 | 8.77e-172 | 482 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0128330 | Msa0473570 | 0.809003 | 2.344904e-50 | -8.615850e-47 |
| Msa0128750 | Msa0473570 | 0.823745 | 1.173734e-53 | -8.615850e-47 |
| Msa0174580 | Msa0473570 | 0.801308 | 9.572874e-49 | -8.615850e-47 |
| Msa0191450 | Msa0473570 | 0.820259 | 7.538413e-53 | -8.615850e-47 |
| Msa0191550 | Msa0473570 | 0.805114 | 1.560535e-49 | -8.615850e-47 |
| Msa0194940 | Msa0473570 | 0.829373 | 5.339491e-55 | -8.615850e-47 |
| Msa0436750 | Msa0473570 | 0.963376 | 5.209827e-122 | -8.615850e-47 |
| Msa0473570 | Msa0481520 | 0.827438 | 1.564423e-54 | -8.615850e-47 |
| Msa0473570 | Msa0484730 | 0.979761 | 1.107525e-148 | -8.615850e-47 |
| Msa0473570 | Msa0579830 | 0.817546 | 3.117512e-52 | -8.615850e-47 |
| Msa0473570 | Msa0619230 | 0.802278 | 6.052756e-49 | -8.615850e-47 |
| Msa0473570 | Msa0649890 | 0.823073 | 1.685668e-53 | -8.615850e-47 |
| Msa0473570 | Msa0822580 | 0.806085 | 9.761168e-50 | -8.615850e-47 |
| Msa0473570 | Msa0838070 | 0.807765 | 4.307193e-50 | -8.615850e-47 |
| Msa0473570 | Msa0929790 | 0.800511 | 1.392790e-48 | -8.615850e-47 |
| Msa0473570 | Msa1037290 | 0.809870 | 1.528104e-50 | -8.615850e-47 |
| Msa0473570 | Msa1126520 | 0.824386 | 8.300482e-54 | -8.615850e-47 |
| Msa0473570 | Msa1164150 | 0.815758 | 7.846239e-52 | -8.615850e-47 |
| Msa0473570 | Msa1311400 | 0.811608 | 6.430333e-51 | -8.615850e-47 |
| Msa0473570 | Msa1368920 | 0.810108 | 1.357993e-50 | -8.615850e-47 |
| Msa0473570 | Msa1374480 | 0.968799 | 3.404897e-129 | -8.615850e-47 |
| Msa0473570 | Msa1463570 | 0.813716 | 2.223086e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473570 | MtrunA17_Chr3g0129471 | 100.000 | 217 | 0 | 0 | 29 | 245 | 1 | 217 | 2.40e-153 | 425 |
| Msa0473570 | MtrunA17_Chr3g0129501 | 94.709 | 189 | 10 | 0 | 29 | 217 | 1 | 189 | 3.49e-95 | 278 |
| Msa0473570 | MtrunA17_Chr3g0129481 | 92.147 | 191 | 12 | 2 | 29 | 217 | 1 | 190 | 3.95e-81 | 242 |
| Msa0473570 | MtrunA17_Chr7g0237631 | 66.901 | 142 | 47 | 0 | 1 | 142 | 1 | 142 | 5.72e-64 | 203 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473570 | AT1G76010.2 | 77.027 | 148 | 33 | 1 | 1 | 147 | 1 | 148 | 4.70e-74 | 229 |
| Msa0473570 | AT1G76010.1 | 77.027 | 148 | 33 | 1 | 1 | 147 | 1 | 148 | 4.70e-74 | 229 |
| Msa0473570 | AT1G20220.1 | 72.973 | 148 | 39 | 1 | 1 | 147 | 1 | 148 | 3.86e-70 | 218 |
| Msa0473570 | AT3G07030.2 | 65.926 | 135 | 46 | 0 | 1 | 135 | 1 | 135 | 2.78e-59 | 192 |
| Msa0473570 | AT3G07030.3 | 65.926 | 135 | 46 | 0 | 1 | 135 | 1 | 135 | 2.78e-59 | 192 |
| Msa0473570 | AT3G07030.4 | 65.926 | 135 | 46 | 0 | 1 | 135 | 1 | 135 | 3.37e-59 | 192 |
| Msa0473570 | AT3G07030.1 | 65.926 | 135 | 46 | 0 | 1 | 135 | 1 | 135 | 8.44e-59 | 191 |
| Msa0473570 | AT3G07030.5 | 65.926 | 135 | 46 | 0 | 1 | 135 | 1 | 135 | 9.97e-59 | 192 |
Find 125 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTTCATATTCATTTAA+AGG | 0.086684 | 3_3:-76275308 | None:intergenic |
| GTGCATGGGGTCGTGCTTTC+CGG | 0.114627 | 3_3:+76275907 | Msa0473570:CDS |
| CACAAAATTGGAATATTTAT+AGG | 0.217889 | 3_3:-76276663 | None:intergenic |
| ACAAAATTGGAATATTTATA+GGG | 0.222337 | 3_3:-76276662 | None:intergenic |
| CGGCCATGTTCCTGCAGTTT+TGG | 0.243075 | 3_3:+76276492 | Msa0473570:three_prime_UTR |
| AGGAGAATAAAACACAAAAT+TGG | 0.250041 | 3_3:-76276675 | None:intergenic |
| TGAGTTGAGTTGACAGGTTT+TGG | 0.270816 | 3_3:-76273562 | None:intergenic |
| CTGCATCAGAACACTATTAT+TGG | 0.280228 | 3_3:+76274449 | Msa0473570:CDS |
| AGCGAGGGGCTGGGTGGCTA+TGG | 0.298249 | 3_3:-76273613 | None:intergenic |
| GCAGAGGGCGTGGCCGTGCA+TGG | 0.313343 | 3_3:+76275892 | Msa0473570:CDS |
| TGCATGGGGTCGTGCTTTCC+GGG | 0.322620 | 3_3:+76275908 | Msa0473570:CDS |
| CGTGGAAGGGGCAGGGGTAG+AGG | 0.333283 | 3_3:+76275466 | Msa0473570:CDS |
| CAGAGGGCGTGGCCGTGCAT+GGG | 0.335065 | 3_3:+76275893 | Msa0473570:CDS |
| CGTGGCCGTGGAAGGGGCAG+GGG | 0.338950 | 3_3:+76275460 | Msa0473570:CDS |
| GACGATTACTGAGCTAATTA+AGG | 0.344294 | 3_3:+76274319 | Msa0473570:CDS |
| AGGGGCAGGGGTAGAGGTAG+AGG | 0.349329 | 3_3:+76275472 | Msa0473570:CDS |
| GTTGATAGGGCTATCTGCCT+TGG | 0.366788 | 3_3:-76273801 | None:intergenic |
| GCGAGGGGCTGGGTGGCTAT+GGG | 0.367507 | 3_3:-76273612 | None:intergenic |
| CTCTTCCCCTTCCACGACCT+TGG | 0.370286 | 3_3:-76276357 | None:intergenic |
| GCTATGGTGCCCAGCCGGTT+GGG | 0.375717 | 3_3:+76275943 | Msa0473570:CDS |
| GGCGTGGCCGTGGAAGGGGC+AGG | 0.382595 | 3_3:+76275458 | Msa0473570:CDS |
| TGCTTACCGCGTGGGGCAGG+TGG | 0.392941 | 3_3:-76275993 | None:intergenic |
| CTCTCGCATGCTTACCGCGT+GGG | 0.394080 | 3_3:-76276001 | None:intergenic |
| ATGGAAGAGAGCGAGGGGCT+GGG | 0.406409 | 3_3:-76273622 | None:intergenic |
| CAGATATCAACCTCCTCTTC+CGG | 0.410668 | 3_3:+76275271 | Msa0473570:intron |
| GGCTATGGTGCCCAGCCGGT+TGG | 0.410845 | 3_3:+76275942 | Msa0473570:CDS |
| TTGATAGGGCTATCTGCCTT+GGG | 0.411012 | 3_3:-76273800 | None:intergenic |
| GCTTACCGCGTGGGGCAGGT+GGG | 0.418616 | 3_3:-76275992 | None:intergenic |
| CGTGGAAGGGGAAGAGGCCG+TGG | 0.425270 | 3_3:+76276364 | Msa0473570:CDS |
| GCTCGCCAAGGATGCGAGGA+AGG | 0.425647 | 3_3:+76275434 | Msa0473570:CDS |
| GATGGAAGAGAGCGAGGGGC+TGG | 0.425790 | 3_3:-76273623 | None:intergenic |
| CAAGGTCGTGGAAGGGGAAG+AGG | 0.427428 | 3_3:+76276358 | Msa0473570:CDS |
| TCTTTGTAGGAATGTACAAT+GGG | 0.439627 | 3_3:+76275823 | Msa0473570:intron |
| CGAGGGGCTGGGTGGCTATG+GGG | 0.442196 | 3_3:-76273611 | None:intergenic |
| GCATGCTTACCGCGTGGGGC+AGG | 0.444268 | 3_3:-76275996 | None:intergenic |
| GGCTATGGTGGCAGAGGGCG+TGG | 0.451114 | 3_3:+76275882 | Msa0473570:CDS |
| GCGTGGCCGTGGAAGGGGCA+GGG | 0.454451 | 3_3:+76275459 | Msa0473570:CDS |
| AGGGGAAGAGGCCGTGGACG+TGG | 0.457525 | 3_3:+76276370 | Msa0473570:CDS |
| TCGCCAAGGATGCGAGGAAG+GGG | 0.461675 | 3_3:+76275436 | Msa0473570:CDS |
| CGTGGACGTGGTCGTGATGC+TGG | 0.462697 | 3_3:+76276382 | Msa0473570:CDS |
| TATGATGGTGGACGTGGCTA+TGG | 0.467843 | 3_3:+76275867 | Msa0473570:CDS |
| GGACGTGGCTATGGTGGCAG+AGG | 0.470972 | 3_3:+76275876 | Msa0473570:CDS |
| CTTACCGCGTGGGGCAGGTG+GGG | 0.471319 | 3_3:-76275991 | None:intergenic |
| CTCGCCAAGGATGCGAGGAA+GGG | 0.475876 | 3_3:+76275435 | Msa0473570:CDS |
| GTTTCTCATCCTTCCTTGAG+TGG | 0.479166 | 3_3:-76273843 | None:intergenic |
| ATCTCTTTCTCTCTCTCCCT+CGG | 0.486916 | 3_3:+76273503 | Msa0473570:five_prime_UTR |
| TTACTTGCAGGCCAAGGTCG+TGG | 0.495476 | 3_3:+76276346 | Msa0473570:intron |
| TACTTTGTCAAAGAAAGAGC+TGG | 0.498781 | 3_3:+76274649 | Msa0473570:CDS |
| TGTCATAATACCCAACCGGC+TGG | 0.498971 | 3_3:-76275953 | None:intergenic |
| GCAGGCCAAGGTCGTGGAAG+GGG | 0.500455 | 3_3:+76276352 | Msa0473570:intron |
| GTTTGTTAATTCAGATGGAT+AGG | 0.501024 | 3_3:+76273759 | Msa0473570:intron |
| TTCTTTGTAGGAATGTACAA+TGG | 0.504434 | 3_3:+76275822 | Msa0473570:intron |
| CGGGGACGAGGACGTGGCTA+TGG | 0.506197 | 3_3:+76275927 | Msa0473570:CDS |
| CTCTACCCCTGCCCCTTCCA+CGG | 0.508387 | 3_3:-76275465 | None:intergenic |
| CAATGAAAACATACGGAAGA+AGG | 0.509927 | 3_3:-76274514 | None:intergenic |
| GCTTTCCGGGGACGAGGACG+TGG | 0.517005 | 3_3:+76275921 | Msa0473570:CDS |
| GAAATCGTTCTCAAAGCAAT+GGG | 0.517050 | 3_3:+76274275 | Msa0473570:CDS |
| TTTACTTGATCAGCCGGAAG+AGG | 0.519336 | 3_3:-76275284 | None:intergenic |
| TTAAAATTATAAATGTTACA+AGG | 0.524255 | 3_3:-76276529 | None:intergenic |
| CCATTGTCATAATACCCAAC+CGG | 0.524799 | 3_3:-76275957 | None:intergenic |
| GGTCGTGCTTTCCGGGGACG+AGG | 0.525875 | 3_3:+76275915 | Msa0473570:CDS |
| ATTTGAGTCGTTCAGTGTTG+CGG | 0.530588 | 3_3:+76276472 | Msa0473570:three_prime_UTR |
| GAATATGGTGATGGTTATGA+TGG | 0.530946 | 3_3:+76275852 | Msa0473570:CDS |
| CATAGCCACGTCCTCGTCCC+CGG | 0.531366 | 3_3:-76275926 | None:intergenic |
| GTGGTTTCAATTTGAGGCCG+AGG | 0.533096 | 3_3:-76273520 | None:intergenic |
| ACGTGGCTATGGTGCCCAGC+CGG | 0.540009 | 3_3:+76275938 | Msa0473570:CDS |
| AGAGGGCGTGGCCGTGCATG+GGG | 0.540930 | 3_3:+76275894 | Msa0473570:CDS |
| AGCAGCTGCTTAGTTAGAAG+AGG | 0.543321 | 3_3:+76276411 | Msa0473570:exon |
| TCACTCACGCTCAACACAAA+CGG | 0.546528 | 3_3:+76273646 | Msa0473570:five_prime_UTR |
| GAGCTGGATACATCCTCCAC+AGG | 0.550506 | 3_3:+76274665 | Msa0473570:CDS |
| TTGCAGGCCAAGGTCGTGGA+AGG | 0.551070 | 3_3:+76276350 | Msa0473570:intron |
| AGAAATCGTTCTCAAAGCAA+TGG | 0.552556 | 3_3:+76274274 | Msa0473570:CDS |
| TAAAATTATAAATGTTACAA+GGG | 0.558311 | 3_3:-76276528 | None:intergenic |
| GTCATAATACCCAACCGGCT+GGG | 0.558897 | 3_3:-76275952 | None:intergenic |
| GGAAAGCACGACCCCATGCA+CGG | 0.559235 | 3_3:-76275905 | None:intergenic |
| AACTACAAAACCAAAACTGC+AGG | 0.559355 | 3_3:-76276502 | None:intergenic |
| ACTCTGTGAGTTGAGTTGAC+AGG | 0.560519 | 3_3:-76273568 | None:intergenic |
| CAACTGATATAACTGACACA+TGG | 0.565866 | 3_3:+76274474 | Msa0473570:CDS |
| GACGTGGCTATGGTGGCAGA+GGG | 0.566506 | 3_3:+76275877 | Msa0473570:CDS |
| GAGTGAGATGGAAGAGAGCG+AGG | 0.567145 | 3_3:-76273629 | None:intergenic |
| TGGTTTCAATTTGAGGCCGA+GGG | 0.579025 | 3_3:-76273519 | None:intergenic |
| AAAATTATAAATGTTACAAG+GGG | 0.579415 | 3_3:-76276527 | None:intergenic |
| ACATGGGAACCACTTGAAGA+AGG | 0.580775 | 3_3:+76274491 | Msa0473570:CDS |
| GGAAGAAGGCCTTCTTCAAG+TGG | 0.583553 | 3_3:-76274500 | None:intergenic |
| ACCTTTAAATGAATATGAAG+AGG | 0.587328 | 3_3:+76275307 | Msa0473570:CDS |
| GATGGTTATGATGGTGGACG+TGG | 0.587716 | 3_3:+76275861 | Msa0473570:CDS |
| CGCCAAGGATGCGAGGAAGG+GGG | 0.588165 | 3_3:+76275437 | Msa0473570:CDS |
| CAAAATTGGAATATTTATAG+GGG | 0.589250 | 3_3:-76276661 | None:intergenic |
| TTAAATGAATATGAAGAGGA+AGG | 0.589261 | 3_3:+76275311 | Msa0473570:CDS |
| TCCTTCCTTGAGTGGTAATG+CGG | 0.591117 | 3_3:-76273835 | None:intergenic |
| ACTTGATCAGCCGGAAGAGG+AGG | 0.591207 | 3_3:-76275281 | None:intergenic |
| TATGGTGATGGTTATGATGG+TGG | 0.591644 | 3_3:+76275855 | Msa0473570:CDS |
| GCAGCTGCTTAGTTAGAAGA+GGG | 0.593490 | 3_3:+76276412 | Msa0473570:exon |
| GATGGTGGACGTGGCTATGG+TGG | 0.594069 | 3_3:+76275870 | Msa0473570:CDS |
| TGTGTTGAGCGTGAGTGAGA+TGG | 0.600798 | 3_3:-76273641 | None:intergenic |
| AACTGATATAACTGACACAT+GGG | 0.600887 | 3_3:+76274475 | Msa0473570:CDS |
| AAACCAAAACTGCAGGAACA+TGG | 0.602157 | 3_3:-76276495 | None:intergenic |
| AAATAAACAAATAAGCAAAG+AGG | 0.602755 | 3_3:-76276438 | None:intergenic |
| TGCAGGCCAAGGTCGTGGAA+GGG | 0.605445 | 3_3:+76276351 | Msa0473570:intron |
| TCTCGCATGCTTACCGCGTG+GGG | 0.605999 | 3_3:-76276000 | None:intergenic |
| AATTATAAATGTTACAAGGG+GGG | 0.606874 | 3_3:-76276525 | None:intergenic |
| GAGATCCGCATTACCACTCA+AGG | 0.607382 | 3_3:+76273830 | Msa0473570:CDS |
| GAAGAGAGCGAGGGGCTGGG+TGG | 0.607690 | 3_3:-76273619 | None:intergenic |
| TTCAGATGGATAGGTATCAG+AGG | 0.607820 | 3_3:+76273768 | Msa0473570:intron |
| TCAGATGGATAGGTATCAGA+GGG | 0.613414 | 3_3:+76273769 | Msa0473570:intron |
| CCGGTTGGGTATTATGACAA+TGG | 0.619666 | 3_3:+76275957 | Msa0473570:CDS |
| AATGAATATGAAGAGGAAGG+AGG | 0.621567 | 3_3:+76275314 | Msa0473570:CDS |
| GCATGGGGTCGTGCTTTCCG+GGG | 0.624471 | 3_3:+76275909 | Msa0473570:CDS |
| AGTGAGATGGAAGAGAGCGA+GGG | 0.624797 | 3_3:-76273628 | None:intergenic |
| CTAACTAAGCAGCTGCTACA+CGG | 0.626764 | 3_3:-76276405 | None:intergenic |
| GATACACAGAAGGCTCGCCA+AGG | 0.633168 | 3_3:+76275422 | Msa0473570:intron |
| TCCGCATTACCACTCAAGGA+AGG | 0.635560 | 3_3:+76273834 | Msa0473570:CDS |
| CAGCATCACGACCACGTCCA+CGG | 0.637764 | 3_3:-76276381 | None:intergenic |
| GAAGGCTCGCCAAGGATGCG+AGG | 0.639147 | 3_3:+76275430 | Msa0473570:intron |
| GTGAGATGGAAGAGAGCGAG+GGG | 0.643963 | 3_3:-76273627 | None:intergenic |
| TGAAAGTTCATACCCTGTGG+AGG | 0.649730 | 3_3:-76274678 | None:intergenic |
| GAGAGAAAGAGATACACGCG+AGG | 0.650816 | 3_3:-76273493 | None:intergenic |
| TTTGTAGGAATGTACAATGG+GGG | 0.656698 | 3_3:+76275825 | Msa0473570:intron |
| GATGGATAGGTATCAGAGGG+TGG | 0.667174 | 3_3:+76273772 | Msa0473570:intron |
| AAATTATAAATGTTACAAGG+GGG | 0.667194 | 3_3:-76276526 | None:intergenic |
| AGCTGGATACATCCTCCACA+GGG | 0.668533 | 3_3:+76274666 | Msa0473570:CDS |
| TCAGAGGGTGGAGAAACCCA+AGG | 0.675762 | 3_3:+76273784 | Msa0473570:CDS |
| AGAGAAAGAGATACACGCGA+GGG | 0.684655 | 3_3:-76273492 | None:intergenic |
| CTTTGTAGGAATGTACAATG+GGG | 0.692917 | 3_3:+76275824 | Msa0473570:intron |
| GATGCCCCACCTGCCCCACG+CGG | 0.736589 | 3_3:+76275987 | Msa0473570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAACTTTTATTTTCTATTA+AGG | + | chr3_3:76275103-76275122 | Msa0473570:intron | 10.0% |
| !! | AAAGGAAATTAAATAATTAT+AGG | + | chr3_3:76275614-76275633 | Msa0473570:intron | 10.0% |
| !! | AAGGAAATTAAATAATTATA+GGG | + | chr3_3:76275615-76275634 | Msa0473570:intron | 10.0% |
| !!! | CTTATTTGTTTATTTTATTT+GGG | + | chr3_3:76276446-76276465 | Msa0473570:three_prime_UTR | 10.0% |
| !! | TAAAATTATAAATGTTACAA+GGG | - | chr3_3:76276531-76276550 | None:intergenic | 10.0% |
| !! | TTAAAATTATAAATGTTACA+AGG | - | chr3_3:76276532-76276551 | None:intergenic | 10.0% |
| !!! | TAAAATATGTTATATGTTTT+CGG | + | chr3_3:76276638-76276657 | Msa0473570:three_prime_UTR | 10.0% |
| !! | AAAAAAAAAAAAGTTTCACT+CGG | - | chr3_3:76274082-76274101 | None:intergenic | 15.0% |
| !! | AGTGAATTTATTTAGATTAT+AGG | + | chr3_3:76274109-76274128 | Msa0473570:intron | 15.0% |
| !!! | TATTTCTCTTTTATTTTGTT+TGG | + | chr3_3:76274134-76274153 | Msa0473570:intron | 15.0% |
| !!! | TCTTAATTCAACTAATATTT+TGG | + | chr3_3:76274187-76274206 | Msa0473570:intron | 15.0% |
| !! | TACTTATAAAAAATGTTCAA+AGG | + | chr3_3:76275596-76275615 | Msa0473570:intron | 15.0% |
| !! | ATAATTATAGGGATTAAATA+TGG | + | chr3_3:76275626-76275645 | Msa0473570:intron | 15.0% |
| !!! | ATAAGAAAATTGTGTTTTAA+AGG | - | chr3_3:76275788-76275807 | None:intergenic | 15.0% |
| !!! | GCTTATTTGTTTATTTTATT+TGG | + | chr3_3:76276445-76276464 | Msa0473570:three_prime_UTR | 15.0% |
| !! | AAAATTATAAATGTTACAAG+GGG | - | chr3_3:76276530-76276549 | None:intergenic | 15.0% |
| !!! | TTTTCTTATAGAAATTTTTG+CGG | + | chr3_3:76276612-76276631 | Msa0473570:three_prime_UTR | 15.0% |
| !! | ACAAAATTGGAATATTTATA+GGG | - | chr3_3:76276665-76276684 | None:intergenic | 15.0% |
| !! | ACATTAATTGAATGAATCTA+GGG | - | chr3_3:76273686-76273705 | None:intergenic | 20.0% |
| !! | AACATTAATTGAATGAATCT+AGG | - | chr3_3:76273687-76273706 | None:intergenic | 20.0% |
| !! | GTTTCGATTTAATTGTTTAT+CGG | + | chr3_3:76273704-76273723 | Msa0473570:intron | 20.0% |
| !!! | TAATATTTTGGTATTTTGTG+TGG | + | chr3_3:76274199-76274218 | Msa0473570:intron | 20.0% |
| !! | AAGTAACTAAATGTAATCTA+AGG | - | chr3_3:76274875-76274894 | None:intergenic | 20.0% |
| !! | ACAAAATTATCAAACATAGT+GGG | - | chr3_3:76275198-76275217 | None:intergenic | 20.0% |
| !! | AACAAAATTATCAAACATAG+TGG | - | chr3_3:76275199-76275218 | None:intergenic | 20.0% |
| !! | AATGATATATGCAAGAAAAT+AGG | + | chr3_3:76275671-76275690 | Msa0473570:intron | 20.0% |
| !! | CTACAAAATTTATTCTTTGT+AGG | + | chr3_3:76275810-76275829 | Msa0473570:intron | 20.0% |
| !! | TTTGATGTTGTATTATCATA+TGG | + | chr3_3:76276030-76276049 | Msa0473570:intron | 20.0% |
| !! | AAATAAACAAATAAGCAAAG+AGG | - | chr3_3:76276441-76276460 | None:intergenic | 20.0% |
| !! | AAATTATAAATGTTACAAGG+GGG | - | chr3_3:76276529-76276548 | None:intergenic | 20.0% |
| !! | CAAAATTGGAATATTTATAG+GGG | - | chr3_3:76276664-76276683 | None:intergenic | 20.0% |
| !! | CACAAAATTGGAATATTTAT+AGG | - | chr3_3:76276666-76276685 | None:intergenic | 20.0% |
| !! | TTTGTGTTTGTTAATTCAGA+TGG | + | chr3_3:76273754-76273773 | Msa0473570:intron | 25.0% |
| ! | AAAAACATAGACATATTGGT+CGG | - | chr3_3:76274411-76274430 | None:intergenic | 25.0% |
| ! | TCTGAAAAACATAGACATAT+TGG | - | chr3_3:76274415-76274434 | None:intergenic | 25.0% |
| ! | GTGAAAACAATGAAAACATA+CGG | - | chr3_3:76274524-76274543 | None:intergenic | 25.0% |
| ! | TTCAATGTAGATTGATAGAA+GGG | + | chr3_3:76275024-76275043 | Msa0473570:intron | 25.0% |
| ! | TTCTTTAAATGTATTCTCTG+TGG | + | chr3_3:76275222-76275241 | Msa0473570:intron | 25.0% |
| ! | ACCTTTAAATGAATATGAAG+AGG | + | chr3_3:76275307-76275326 | Msa0473570:CDS | 25.0% |
| ! | TCCTCTTCATATTCATTTAA+AGG | - | chr3_3:76275311-76275330 | None:intergenic | 25.0% |
| ! | TTAAATGAATATGAAGAGGA+AGG | + | chr3_3:76275311-76275330 | Msa0473570:CDS | 25.0% |
| !! | GATTTTATGACTTGAGAATA+AGG | + | chr3_3:76275530-76275549 | Msa0473570:intron | 25.0% |
| ! | TGAAAAATTAGCAATCAACA+TGG | + | chr3_3:76275571-76275590 | Msa0473570:intron | 25.0% |
| ! | GAAAATAGGAAATATCTACA+TGG | + | chr3_3:76275685-76275704 | Msa0473570:intron | 25.0% |
| ! | TTCTGATCATTCTACAATAT+AGG | - | chr3_3:76275738-76275757 | None:intergenic | 25.0% |
| ! | ACTAACAAATAAATACGACA+AGG | - | chr3_3:76276181-76276200 | None:intergenic | 25.0% |
| !!! | TATTTGTTAGTTTTCTTTGC+TGG | + | chr3_3:76276190-76276209 | Msa0473570:intron | 25.0% |
| ! | AATTATAAATGTTACAAGGG+GGG | - | chr3_3:76276528-76276547 | None:intergenic | 25.0% |
| ! | TGTTTTGTGGTTTCAATTTG+AGG | - | chr3_3:76273529-76273548 | None:intergenic | 30.0% |
| ! | GTTTGTTAATTCAGATGGAT+AGG | + | chr3_3:76273759-76273778 | Msa0473570:intron | 30.0% |
| AACACTAACTTGAAAAAGAG+TGG | - | chr3_3:76273885-76273904 | None:intergenic | 30.0% | |
| TCTAAATTCACACATATGAG+TGG | - | chr3_3:76273965-76273984 | None:intergenic | 30.0% | |
| !!! | TTAGATTTTTTGATGTTCCG+AGG | + | chr3_3:76274003-76274022 | Msa0473570:intron | 30.0% |
| !!! | TAGATTTTTTGATGTTCCGA+GGG | + | chr3_3:76274004-76274023 | Msa0473570:intron | 30.0% |
| AATCAATCAATTATGTCCCT+CGG | - | chr3_3:76274023-76274042 | None:intergenic | 30.0% | |
| ACCAACCAATTTAATCTGTA+GGG | - | chr3_3:76274364-76274383 | None:intergenic | 30.0% | |
| !! | ATGTCTATGTTTTTCAGAGA+AGG | + | chr3_3:76274417-76274436 | Msa0473570:intron | 30.0% |
| AACTGATATAACTGACACAT+GGG | + | chr3_3:76274475-76274494 | Msa0473570:CDS | 30.0% | |
| TAGTTTATGTATGCATAGCA+TGG | + | chr3_3:76274561-76274580 | Msa0473570:intron | 30.0% | |
| AGTTTATGTATGCATAGCAT+GGG | + | chr3_3:76274562-76274581 | Msa0473570:intron | 30.0% | |
| ! | TTCATTTTACTTGTGCAGTT+TGG | + | chr3_3:76274595-76274614 | Msa0473570:intron | 30.0% |
| ! | TTCATGCCTTATCTTTTGAT+TGG | + | chr3_3:76274739-76274758 | Msa0473570:intron | 30.0% |
| ACTAAGCCAATCAAAAGATA+AGG | - | chr3_3:76274748-76274767 | None:intergenic | 30.0% | |
| CTCAAATTATAACTGTTGTC+CGG | + | chr3_3:76274900-76274919 | Msa0473570:intron | 30.0% | |
| CTTCAATGTAGATTGATAGA+AGG | + | chr3_3:76275023-76275042 | Msa0473570:intron | 30.0% | |
| TCACTTGTATAAATCATGAC+TGG | - | chr3_3:76275165-76275184 | None:intergenic | 30.0% | |
| ! | GTGAAAAGTTGTGATTTTCA+TGG | + | chr3_3:76275374-76275393 | Msa0473570:intron | 30.0% |
| !! | CTGTAATTTTGATACACAGA+AGG | + | chr3_3:76275412-76275431 | Msa0473570:intron | 30.0% |
| ! | ATGACTTGAGAATAAGGTTT+TGG | + | chr3_3:76275536-76275555 | Msa0473570:intron | 30.0% |
| AATAGGAAATATCTACATGG+AGG | + | chr3_3:76275688-76275707 | Msa0473570:intron | 30.0% | |
| TATCTACATGGAGGAAAATA+CGG | + | chr3_3:76275697-76275716 | Msa0473570:intron | 30.0% | |
| TTCTTTGTAGGAATGTACAA+TGG | + | chr3_3:76275822-76275841 | Msa0473570:intron | 30.0% | |
| TCTTTGTAGGAATGTACAAT+GGG | + | chr3_3:76275823-76275842 | Msa0473570:intron | 30.0% | |
| ! | TCTTCTGTCGCTTATTTAAT+AGG | - | chr3_3:76276126-76276145 | None:intergenic | 30.0% |
| AATACGACAAGGAAAACAAT+TGG | - | chr3_3:76276170-76276189 | None:intergenic | 30.0% | |
| !!! | GGATATGGGATTTTGTTTTG+TGG | - | chr3_3:76273542-76273561 | None:intergenic | 35.0% |
| ! | TGAATGAATCTAGGGTTTGA+AGG | - | chr3_3:76273678-76273697 | None:intergenic | 35.0% |
| ! | GGATCTCATTTTCGTTGATA+GGG | - | chr3_3:76273817-76273836 | None:intergenic | 35.0% |
| AGAAATCGTTCTCAAAGCAA+TGG | + | chr3_3:76274274-76274293 | Msa0473570:CDS | 35.0% | |
| GAAATCGTTCTCAAAGCAAT+GGG | + | chr3_3:76274275-76274294 | Msa0473570:CDS | 35.0% | |
| GACGATTACTGAGCTAATTA+AGG | + | chr3_3:76274319-76274338 | Msa0473570:CDS | 35.0% | |
| GAGTTCCCTACAGATTAAAT+TGG | + | chr3_3:76274356-76274375 | Msa0473570:intron | 35.0% | |
| TCCCTACAGATTAAATTGGT+TGG | + | chr3_3:76274360-76274379 | Msa0473570:intron | 35.0% | |
| CACCAACCAATTTAATCTGT+AGG | - | chr3_3:76274365-76274384 | None:intergenic | 35.0% | |
| !! | GTTTTTCAGAGAAGGATTGT+TGG | + | chr3_3:76274425-76274444 | Msa0473570:intron | 35.0% |
| CTGCATCAGAACACTATTAT+TGG | + | chr3_3:76274449-76274468 | Msa0473570:CDS | 35.0% | |
| CAACTGATATAACTGACACA+TGG | + | chr3_3:76274474-76274493 | Msa0473570:CDS | 35.0% | |
| CAATGAAAACATACGGAAGA+AGG | - | chr3_3:76274517-76274536 | None:intergenic | 35.0% | |
| TACTTTGTCAAAGAAAGAGC+TGG | + | chr3_3:76274649-76274668 | Msa0473570:CDS | 35.0% | |
| !!! | TTTTTGAAGCAAACCACTTG+AGG | + | chr3_3:76274770-76274789 | Msa0473570:intron | 35.0% |
| TAGGAAACATGTTAGCTAAG+TGG | + | chr3_3:76274795-76274814 | Msa0473570:intron | 35.0% | |
| ATGTTAATCTCAGTCACCAA+CGG | - | chr3_3:76274842-76274861 | None:intergenic | 35.0% | |
| ! | ATCAAACATAGTGGGAAAGA+CGG | - | chr3_3:76275190-76275209 | None:intergenic | 35.0% |
| ! | AAAGGTTTTACTTGATCAGC+CGG | - | chr3_3:76275293-76275312 | None:intergenic | 35.0% |
| AATGAATATGAAGAGGAAGG+AGG | + | chr3_3:76275314-76275333 | Msa0473570:CDS | 35.0% | |
| TGATGTAGTCAATCACATGT+AGG | - | chr3_3:76275652-76275671 | None:intergenic | 35.0% | |
| CTTTGTAGGAATGTACAATG+GGG | + | chr3_3:76275824-76275843 | Msa0473570:intron | 35.0% | |
| TTTGTAGGAATGTACAATGG+GGG | + | chr3_3:76275825-76275844 | Msa0473570:intron | 35.0% | |
| !! | GAATATGGTGATGGTTATGA+TGG | + | chr3_3:76275852-76275871 | Msa0473570:CDS | 35.0% |
| AGCGACAGAAGAAAATTACT+TGG | + | chr3_3:76276134-76276153 | Msa0473570:intron | 35.0% | |
| CTACAACGATTACTCTAGTA+AGG | - | chr3_3:76276232-76276251 | None:intergenic | 35.0% | |
| ATGCTGTGTTAATTACTTGC+AGG | + | chr3_3:76276334-76276353 | Msa0473570:intron | 35.0% | |
| AACTACAAAACCAAAACTGC+AGG | - | chr3_3:76276505-76276524 | None:intergenic | 35.0% | |
| !!! | TTGACAGGTTTTGGGGATAT+GGG | - | chr3_3:76273556-76273575 | None:intergenic | 40.0% |
| !!! | AGTTGAGTTGACAGGTTTTG+GGG | - | chr3_3:76273563-76273582 | None:intergenic | 40.0% |
| !!! | GAGTTGAGTTGACAGGTTTT+GGG | - | chr3_3:76273564-76273583 | None:intergenic | 40.0% |
| !!! | TGAGTTGAGTTGACAGGTTT+TGG | - | chr3_3:76273565-76273584 | None:intergenic | 40.0% |
| TTCAGATGGATAGGTATCAG+AGG | + | chr3_3:76273768-76273787 | Msa0473570:intron | 40.0% | |
| TCAGATGGATAGGTATCAGA+GGG | + | chr3_3:76273769-76273788 | Msa0473570:intron | 40.0% | |
| ! | CGGATCTCATTTTCGTTGAT+AGG | - | chr3_3:76273818-76273837 | None:intergenic | 40.0% |
| TCACTCGGCAATTAATACAC+TGG | - | chr3_3:76274067-76274086 | None:intergenic | 40.0% | |
| ! | GCACTATGTGTGTTTTCTGT+AGG | + | chr3_3:76274238-76274257 | Msa0473570:intron | 40.0% |
| ! | GTGTGTTTTCTGTAGGAGAA+AGG | + | chr3_3:76274245-76274264 | Msa0473570:intron | 40.0% |
| ACTGAGCTAATTAAGGTGAG+AGG | + | chr3_3:76274326-76274345 | Msa0473570:intron | 40.0% | |
| CTGAGCTAATTAAGGTGAGA+GGG | + | chr3_3:76274327-76274346 | Msa0473570:intron | 40.0% | |
| TCATGAAAGTTCATACCCTG+TGG | - | chr3_3:76274684-76274703 | None:intergenic | 40.0% | |
| AAGCAAACCACTTGAGGATT+AGG | + | chr3_3:76274776-76274795 | Msa0473570:intron | 40.0% | |
| CATGTTTCCTAATCCTCAAG+TGG | - | chr3_3:76274786-76274805 | None:intergenic | 40.0% | |
| GCATTTACACAAACACAGAC+CGG | - | chr3_3:76274922-76274941 | None:intergenic | 40.0% | |
| ATGTTAGACCCTTGACTTCA+AGG | + | chr3_3:76274950-76274969 | Msa0473570:intron | 40.0% | |
| ! | TACAATGGGGGTATGGAATA+TGG | + | chr3_3:76275837-76275856 | Msa0473570:CDS | 40.0% |
| !! | TATGGTGATGGTTATGATGG+TGG | + | chr3_3:76275855-76275874 | Msa0473570:CDS | 40.0% |
| CCATTGTCATAATACCCAAC+CGG | - | chr3_3:76275960-76275979 | None:intergenic | 40.0% | |
| TGTTAATTACTTGCAGGCCA+AGG | + | chr3_3:76276340-76276359 | Msa0473570:intron | 40.0% | |
| ATTTGAGTCGTTCAGTGTTG+CGG | + | chr3_3:76276472-76276491 | Msa0473570:three_prime_UTR | 40.0% | |
| AAACCAAAACTGCAGGAACA+TGG | - | chr3_3:76276498-76276517 | None:intergenic | 40.0% | |
| AGAGAAAGAGATACACGCGA+GGG | - | chr3_3:76273495-76273514 | None:intergenic | 45.0% | |
| ATCTCTTTCTCTCTCTCCCT+CGG | + | chr3_3:76273503-76273522 | Msa0473570:five_prime_UTR | 45.0% | |
| ! | TGGTTTCAATTTGAGGCCGA+GGG | - | chr3_3:76273522-76273541 | None:intergenic | 45.0% |
| !!! | GTTGACAGGTTTTGGGGATA+TGG | - | chr3_3:76273557-76273576 | None:intergenic | 45.0% |
| !! | ACTCTGTGAGTTGAGTTGAC+AGG | - | chr3_3:76273571-76273590 | None:intergenic | 45.0% |
| TCACTCACGCTCAACACAAA+CGG | + | chr3_3:76273646-76273665 | Msa0473570:five_prime_UTR | 45.0% | |
| TTGATAGGGCTATCTGCCTT+GGG | - | chr3_3:76273803-76273822 | None:intergenic | 45.0% | |
| ! | TCCTTCCTTGAGTGGTAATG+CGG | - | chr3_3:76273838-76273857 | None:intergenic | 45.0% |
| GTTTCTCATCCTTCCTTGAG+TGG | - | chr3_3:76273846-76273865 | None:intergenic | 45.0% | |
| ACATGGGAACCACTTGAAGA+AGG | + | chr3_3:76274491-76274510 | Msa0473570:CDS | 45.0% | |
| TGAAAGTTCATACCCTGTGG+AGG | - | chr3_3:76274681-76274700 | None:intergenic | 45.0% | |
| ACCACACTCCTTGAAGTCAA+GGG | - | chr3_3:76274961-76274980 | None:intergenic | 45.0% | |
| TACCACACTCCTTGAAGTCA+AGG | - | chr3_3:76274962-76274981 | None:intergenic | 45.0% | |
| CAGATATCAACCTCCTCTTC+CGG | + | chr3_3:76275271-76275290 | Msa0473570:intron | 45.0% | |
| TTTACTTGATCAGCCGGAAG+AGG | - | chr3_3:76275287-76275306 | None:intergenic | 45.0% | |
| AGGAATGTACAATGGGGGTA+TGG | + | chr3_3:76275830-76275849 | Msa0473570:intron | 45.0% | |
| CCGGTTGGGTATTATGACAA+TGG | + | chr3_3:76275957-76275976 | Msa0473570:CDS | 45.0% | |
| CTAACTAAGCAGCTGCTACA+CGG | - | chr3_3:76276408-76276427 | None:intergenic | 45.0% | |
| AGCAGCTGCTTAGTTAGAAG+AGG | + | chr3_3:76276411-76276430 | Msa0473570:exon | 45.0% | |
| GCAGCTGCTTAGTTAGAAGA+GGG | + | chr3_3:76276412-76276431 | Msa0473570:exon | 45.0% | |
| GAGAGAAAGAGATACACGCG+AGG | - | chr3_3:76273496-76273515 | None:intergenic | 50.0% | |
| ! | GTGGTTTCAATTTGAGGCCG+AGG | - | chr3_3:76273523-76273542 | None:intergenic | 50.0% |
| AGTGAGATGGAAGAGAGCGA+GGG | - | chr3_3:76273631-76273650 | None:intergenic | 50.0% | |
| TGTGTTGAGCGTGAGTGAGA+TGG | - | chr3_3:76273644-76273663 | None:intergenic | 50.0% | |
| GATGGATAGGTATCAGAGGG+TGG | + | chr3_3:76273772-76273791 | Msa0473570:intron | 50.0% | |
| ! | GTTGATAGGGCTATCTGCCT+TGG | - | chr3_3:76273804-76273823 | None:intergenic | 50.0% |
| GAGATCCGCATTACCACTCA+AGG | + | chr3_3:76273830-76273849 | Msa0473570:CDS | 50.0% | |
| TCCGCATTACCACTCAAGGA+AGG | + | chr3_3:76273834-76273853 | Msa0473570:CDS | 50.0% | |
| GGAAGAAGGCCTTCTTCAAG+TGG | - | chr3_3:76274503-76274522 | None:intergenic | 50.0% | |
| AGCTGGATACATCCTCCACA+GGG | + | chr3_3:76274666-76274685 | Msa0473570:CDS | 50.0% | |
| !! | AACGGCTTCACTCTGAAGTG+TGG | - | chr3_3:76274824-76274843 | None:intergenic | 50.0% |
| ACACTTCAGAGTGAAGCCGT+TGG | + | chr3_3:76274823-76274842 | Msa0473570:intron | 50.0% | |
| ACCCTTGACTTCAAGGAGTG+TGG | + | chr3_3:76274957-76274976 | Msa0473570:intron | 50.0% | |
| ! | GGGGGTATGGAATATGGTGA+TGG | + | chr3_3:76275843-76275862 | Msa0473570:CDS | 50.0% |
| !! | GATGGTTATGATGGTGGACG+TGG | + | chr3_3:76275861-76275880 | Msa0473570:CDS | 50.0% |
| !! | TATGATGGTGGACGTGGCTA+TGG | + | chr3_3:76275867-76275886 | Msa0473570:CDS | 50.0% |
| GTCATAATACCCAACCGGCT+GGG | - | chr3_3:76275955-76275974 | None:intergenic | 50.0% | |
| TGTCATAATACCCAACCGGC+TGG | - | chr3_3:76275956-76275975 | None:intergenic | 50.0% | |
| GTGAGATGGAAGAGAGCGAG+GGG | - | chr3_3:76273630-76273649 | None:intergenic | 55.0% | |
| GAGTGAGATGGAAGAGAGCG+AGG | - | chr3_3:76273632-76273651 | None:intergenic | 55.0% | |
| TCAGAGGGTGGAGAAACCCA+AGG | + | chr3_3:76273784-76273803 | Msa0473570:CDS | 55.0% | |
| GAGCTGGATACATCCTCCAC+AGG | + | chr3_3:76274665-76274684 | Msa0473570:CDS | 55.0% | |
| ACTTGATCAGCCGGAAGAGG+AGG | - | chr3_3:76275284-76275303 | None:intergenic | 55.0% | |
| GATACACAGAAGGCTCGCCA+AGG | + | chr3_3:76275422-76275441 | Msa0473570:intron | 55.0% | |
| TTACTTGCAGGCCAAGGTCG+TGG | + | chr3_3:76276346-76276365 | Msa0473570:intron | 55.0% | |
| ! | CGGCCATGTTCCTGCAGTTT+TGG | + | chr3_3:76276492-76276511 | Msa0473570:three_prime_UTR | 55.0% |
| ATGGAAGAGAGCGAGGGGCT+GGG | - | chr3_3:76273625-76273644 | None:intergenic | 60.0% | |
| CTCGCCAAGGATGCGAGGAA+GGG | + | chr3_3:76275435-76275454 | Msa0473570:CDS | 60.0% | |
| TCGCCAAGGATGCGAGGAAG+GGG | + | chr3_3:76275436-76275455 | Msa0473570:CDS | 60.0% | |
| !! | GATGGTGGACGTGGCTATGG+TGG | + | chr3_3:76275870-76275889 | Msa0473570:CDS | 60.0% |
| GACGTGGCTATGGTGGCAGA+GGG | + | chr3_3:76275877-76275896 | Msa0473570:CDS | 60.0% | |
| ! | GGAAAGCACGACCCCATGCA+CGG | - | chr3_3:76275908-76275927 | None:intergenic | 60.0% |
| GTGCATGGGGTCGTGCTTTC+CGG | + | chr3_3:76275907-76275926 | Msa0473570:CDS | 60.0% | |
| TGCATGGGGTCGTGCTTTCC+GGG | + | chr3_3:76275908-76275927 | Msa0473570:CDS | 60.0% | |
| TCTCGCATGCTTACCGCGTG+GGG | - | chr3_3:76276003-76276022 | None:intergenic | 60.0% | |
| CTCTCGCATGCTTACCGCGT+GGG | - | chr3_3:76276004-76276023 | None:intergenic | 60.0% | |
| TTGCAGGCCAAGGTCGTGGA+AGG | + | chr3_3:76276350-76276369 | Msa0473570:intron | 60.0% | |
| TGCAGGCCAAGGTCGTGGAA+GGG | + | chr3_3:76276351-76276370 | Msa0473570:intron | 60.0% | |
| CTCTTCCCCTTCCACGACCT+TGG | - | chr3_3:76276360-76276379 | None:intergenic | 60.0% | |
| CAAGGTCGTGGAAGGGGAAG+AGG | + | chr3_3:76276358-76276377 | Msa0473570:CDS | 60.0% | |
| CAGCATCACGACCACGTCCA+CGG | - | chr3_3:76276384-76276403 | None:intergenic | 60.0% | |
| GATGGAAGAGAGCGAGGGGC+TGG | - | chr3_3:76273626-76273645 | None:intergenic | 65.0% | |
| GAAGGCTCGCCAAGGATGCG+AGG | + | chr3_3:76275430-76275449 | Msa0473570:intron | 65.0% | |
| GCTCGCCAAGGATGCGAGGA+AGG | + | chr3_3:76275434-76275453 | Msa0473570:CDS | 65.0% | |
| CGCCAAGGATGCGAGGAAGG+GGG | + | chr3_3:76275437-76275456 | Msa0473570:CDS | 65.0% | |
| CTCTACCCCTGCCCCTTCCA+CGG | - | chr3_3:76275468-76275487 | None:intergenic | 65.0% | |
| AGGGGCAGGGGTAGAGGTAG+AGG | + | chr3_3:76275472-76275491 | Msa0473570:CDS | 65.0% | |
| GGACGTGGCTATGGTGGCAG+AGG | + | chr3_3:76275876-76275895 | Msa0473570:CDS | 65.0% | |
| GCATGGGGTCGTGCTTTCCG+GGG | + | chr3_3:76275909-76275928 | Msa0473570:CDS | 65.0% | |
| CATAGCCACGTCCTCGTCCC+CGG | - | chr3_3:76275929-76275948 | None:intergenic | 65.0% | |
| ACGTGGCTATGGTGCCCAGC+CGG | + | chr3_3:76275938-76275957 | Msa0473570:CDS | 65.0% | |
| GCTATGGTGCCCAGCCGGTT+GGG | + | chr3_3:76275943-76275962 | Msa0473570:CDS | 65.0% | |
| GCTCTCGCATGCTTACCGCG+TGG | - | chr3_3:76276005-76276024 | None:intergenic | 65.0% | |
| GCAGGCCAAGGTCGTGGAAG+GGG | + | chr3_3:76276352-76276371 | Msa0473570:intron | 65.0% | |
| CGTGGACGTGGTCGTGATGC+TGG | + | chr3_3:76276382-76276401 | Msa0473570:CDS | 65.0% | |
| CGAGGGGCTGGGTGGCTATG+GGG | - | chr3_3:76273614-76273633 | None:intergenic | 70.0% | |
| GCGAGGGGCTGGGTGGCTAT+GGG | - | chr3_3:76273615-76273634 | None:intergenic | 70.0% | |
| AGCGAGGGGCTGGGTGGCTA+TGG | - | chr3_3:76273616-76273635 | None:intergenic | 70.0% | |
| GAAGAGAGCGAGGGGCTGGG+TGG | - | chr3_3:76273622-76273641 | None:intergenic | 70.0% | |
| CGCCCCCTTCCTCGCATCCT+TGG | - | chr3_3:76275442-76275461 | None:intergenic | 70.0% | |
| AGGATGCGAGGAAGGGGGCG+TGG | + | chr3_3:76275442-76275461 | Msa0473570:CDS | 70.0% | |
| ! | AAGGGGGCGTGGCCGTGGAA+GGG | + | chr3_3:76275453-76275472 | Msa0473570:CDS | 70.0% |
| CGTGGAAGGGGCAGGGGTAG+AGG | + | chr3_3:76275466-76275485 | Msa0473570:CDS | 70.0% | |
| GGCTATGGTGGCAGAGGGCG+TGG | + | chr3_3:76275882-76275901 | Msa0473570:CDS | 70.0% | |
| ! | CAGAGGGCGTGGCCGTGCAT+GGG | + | chr3_3:76275893-76275912 | Msa0473570:CDS | 70.0% |
| ! | AGAGGGCGTGGCCGTGCATG+GGG | + | chr3_3:76275894-76275913 | Msa0473570:CDS | 70.0% |
| GGTCGTGCTTTCCGGGGACG+AGG | + | chr3_3:76275915-76275934 | Msa0473570:CDS | 70.0% | |
| GCTTTCCGGGGACGAGGACG+TGG | + | chr3_3:76275921-76275940 | Msa0473570:CDS | 70.0% | |
| CGGGGACGAGGACGTGGCTA+TGG | + | chr3_3:76275927-76275946 | Msa0473570:CDS | 70.0% | |
| GGCTATGGTGCCCAGCCGGT+TGG | + | chr3_3:76275942-76275961 | Msa0473570:CDS | 70.0% | |
| CTTACCGCGTGGGGCAGGTG+GGG | - | chr3_3:76275994-76276013 | None:intergenic | 70.0% | |
| GCTTACCGCGTGGGGCAGGT+GGG | - | chr3_3:76275995-76276014 | None:intergenic | 70.0% | |
| TGCTTACCGCGTGGGGCAGG+TGG | - | chr3_3:76275996-76276015 | None:intergenic | 70.0% | |
| GCATGCTTACCGCGTGGGGC+AGG | - | chr3_3:76275999-76276018 | None:intergenic | 70.0% | |
| CGTGGAAGGGGAAGAGGCCG+TGG | + | chr3_3:76276364-76276383 | Msa0473570:CDS | 70.0% | |
| AGGGGAAGAGGCCGTGGACG+TGG | + | chr3_3:76276370-76276389 | Msa0473570:CDS | 70.0% | |
| ! | GAAGGGGGCGTGGCCGTGGA+AGG | + | chr3_3:76275452-76275471 | Msa0473570:CDS | 75.0% |
| ! | AGGGGGCGTGGCCGTGGAAG+GGG | + | chr3_3:76275454-76275473 | Msa0473570:CDS | 75.0% |
| GCGTGGCCGTGGAAGGGGCA+GGG | + | chr3_3:76275459-76275478 | Msa0473570:CDS | 75.0% | |
| CGTGGCCGTGGAAGGGGCAG+GGG | + | chr3_3:76275460-76275479 | Msa0473570:CDS | 75.0% | |
| ! | GCAGAGGGCGTGGCCGTGCA+TGG | + | chr3_3:76275892-76275911 | Msa0473570:CDS | 75.0% |
| GATGCCCCACCTGCCCCACG+CGG | + | chr3_3:76275987-76276006 | Msa0473570:CDS | 75.0% | |
| !! | CGAGGAAGGGGGCGTGGCCG+TGG | + | chr3_3:76275448-76275467 | Msa0473570:CDS | 80.0% |
| ! | GGCGTGGCCGTGGAAGGGGC+AGG | + | chr3_3:76275458-76275477 | Msa0473570:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 76273484 | 76276696 | 76273484 | ID=Msa0473570;Name=Msa0473570 |
| chr3_3 | mRNA | 76273484 | 76276696 | 76273484 | ID=Msa0473570-mRNA-1;Parent=Msa0473570;Name=Msa0473570-mRNA-1;_AED=0.26;_eAED=0.26;_QI=184|1|1|1|0.87|0.88|9|273|245 |
| chr3_3 | exon | 76273484 | 76273667 | 76273484 | ID=Msa0473570-mRNA-1:exon:19949;Parent=Msa0473570-mRNA-1 |
| chr3_3 | exon | 76273773 | 76273895 | 76273773 | ID=Msa0473570-mRNA-1:exon:19950;Parent=Msa0473570-mRNA-1 |
| chr3_3 | exon | 76274260 | 76274340 | 76274260 | ID=Msa0473570-mRNA-1:exon:19951;Parent=Msa0473570-mRNA-1 |
| chr3_3 | exon | 76274434 | 76274522 | 76274434 | ID=Msa0473570-mRNA-1:exon:19952;Parent=Msa0473570-mRNA-1 |
| chr3_3 | exon | 76274613 | 76274687 | 76274613 | ID=Msa0473570-mRNA-1:exon:19953;Parent=Msa0473570-mRNA-1 |
| chr3_3 | exon | 76275274 | 76275335 | 76275274 | ID=Msa0473570-mRNA-1:exon:19954;Parent=Msa0473570-mRNA-1 |
| chr3_3 | exon | 76275431 | 76275493 | 76275431 | ID=Msa0473570-mRNA-1:exon:19955;Parent=Msa0473570-mRNA-1 |
| chr3_3 | exon | 76275832 | 76276008 | 76275832 | ID=Msa0473570-mRNA-1:exon:19956;Parent=Msa0473570-mRNA-1 |
| chr3_3 | exon | 76276356 | 76276696 | 76276356 | ID=Msa0473570-mRNA-1:exon:19957;Parent=Msa0473570-mRNA-1 |
| chr3_3 | five_prime_UTR | 76273484 | 76273667 | 76273484 | ID=Msa0473570-mRNA-1:five_prime_utr;Parent=Msa0473570-mRNA-1 |
| chr3_3 | CDS | 76273773 | 76273895 | 76273773 | ID=Msa0473570-mRNA-1:cds;Parent=Msa0473570-mRNA-1 |
| chr3_3 | CDS | 76274260 | 76274340 | 76274260 | ID=Msa0473570-mRNA-1:cds;Parent=Msa0473570-mRNA-1 |
| chr3_3 | CDS | 76274434 | 76274522 | 76274434 | ID=Msa0473570-mRNA-1:cds;Parent=Msa0473570-mRNA-1 |
| chr3_3 | CDS | 76274613 | 76274687 | 76274613 | ID=Msa0473570-mRNA-1:cds;Parent=Msa0473570-mRNA-1 |
| chr3_3 | CDS | 76275274 | 76275335 | 76275274 | ID=Msa0473570-mRNA-1:cds;Parent=Msa0473570-mRNA-1 |
| chr3_3 | CDS | 76275431 | 76275493 | 76275431 | ID=Msa0473570-mRNA-1:cds;Parent=Msa0473570-mRNA-1 |
| chr3_3 | CDS | 76275832 | 76276008 | 76275832 | ID=Msa0473570-mRNA-1:cds;Parent=Msa0473570-mRNA-1 |
| chr3_3 | CDS | 76276356 | 76276423 | 76276356 | ID=Msa0473570-mRNA-1:cds;Parent=Msa0473570-mRNA-1 |
| chr3_3 | three_prime_UTR | 76276424 | 76276696 | 76276424 | ID=Msa0473570-mRNA-1:three_prime_utr;Parent=Msa0473570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
