Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436750 | XP_003602519.1 | 100.000 | 245 | 0 | 0 | 62 | 306 | 1 | 245 | 1.21e-171 | 485 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436750 | sp|Q99JH1|RP25L_MOUSE | 35.294 | 136 | 79 | 3 | 62 | 188 | 1 | 136 | 7.32e-18 | 82.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436750 | G7JAD8 | 100.000 | 245 | 0 | 0 | 62 | 306 | 1 | 245 | 5.76e-172 | 485 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0128750 | Msa0436750 | 0.814449 | 1.531822e-51 | -8.615850e-47 |
| Msa0168320 | Msa0436750 | 0.800473 | 1.417702e-48 | -8.615850e-47 |
| Msa0191450 | Msa0436750 | 0.820010 | 8.597761e-53 | -8.615850e-47 |
| Msa0191550 | Msa0436750 | 0.801130 | 1.040829e-48 | -8.615850e-47 |
| Msa0194940 | Msa0436750 | 0.824219 | 9.088216e-54 | -8.615850e-47 |
| Msa0436750 | Msa0473570 | 0.963376 | 5.209827e-122 | -8.615850e-47 |
| Msa0436750 | Msa0481520 | 0.836899 | 7.139228e-57 | -8.615850e-47 |
| Msa0436750 | Msa0484730 | 0.972399 | 1.056590e-134 | -8.615850e-47 |
| Msa0436750 | Msa0579830 | 0.814985 | 1.165842e-51 | -8.615850e-47 |
| Msa0436750 | Msa0619230 | 0.801108 | 1.052000e-48 | -8.615850e-47 |
| Msa0436750 | Msa0649890 | 0.828441 | 8.977313e-55 | -8.615850e-47 |
| Msa0436750 | Msa0758420 | 0.832671 | 8.275083e-56 | -8.615850e-47 |
| Msa0436750 | Msa0788380 | 0.807080 | 6.018788e-50 | -8.615850e-47 |
| Msa0436750 | Msa0822580 | 0.830896 | 2.267645e-55 | -8.615850e-47 |
| Msa0436750 | Msa0838070 | 0.837923 | 3.902627e-57 | -8.615850e-47 |
| Msa0436750 | Msa0929790 | 0.814529 | 1.471148e-51 | -8.615850e-47 |
| Msa0436750 | Msa1037290 | 0.826050 | 3.355283e-54 | -8.615850e-47 |
| Msa0436750 | Msa1082170 | 0.815097 | 1.100934e-51 | -8.615850e-47 |
| Msa0436750 | Msa1126520 | 0.841808 | 3.794725e-58 | -8.615850e-47 |
| Msa0436750 | Msa1164150 | 0.834444 | 2.986180e-56 | -8.615850e-47 |
| Msa0436750 | Msa1258540 | 0.801527 | 8.632764e-49 | -8.615850e-47 |
| Msa0436750 | Msa1311400 | 0.818155 | 2.272258e-52 | -8.615850e-47 |
| Msa0436750 | Msa1368920 | 0.826197 | 3.095185e-54 | -8.615850e-47 |
| Msa0436750 | Msa1374480 | 0.967150 | 6.988676e-127 | -8.615850e-47 |
| Msa0436750 | Msa1463570 | 0.801705 | 7.938349e-49 | -8.615850e-47 |
| Msa0315430 | Msa0436750 | 0.807500 | 4.904859e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436750 | MtrunA17_Chr3g0129471 | 100.000 | 217 | 0 | 0 | 90 | 306 | 1 | 217 | 1.01e-153 | 429 |
| Msa0436750 | MtrunA17_Chr3g0129501 | 94.709 | 189 | 10 | 0 | 90 | 278 | 1 | 189 | 1.69e-93 | 276 |
| Msa0436750 | MtrunA17_Chr3g0129481 | 92.147 | 191 | 12 | 2 | 90 | 278 | 1 | 190 | 2.62e-79 | 239 |
| Msa0436750 | MtrunA17_Chr7g0237631 | 66.901 | 142 | 47 | 0 | 62 | 203 | 1 | 142 | 2.32e-62 | 201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436750 | AT1G76010.2 | 77.027 | 148 | 33 | 1 | 62 | 208 | 1 | 148 | 1.32e-72 | 228 |
| Msa0436750 | AT1G76010.1 | 77.027 | 148 | 33 | 1 | 62 | 208 | 1 | 148 | 1.32e-72 | 228 |
| Msa0436750 | AT1G20220.1 | 72.973 | 148 | 39 | 1 | 62 | 208 | 1 | 148 | 1.04e-68 | 216 |
| Msa0436750 | AT3G07030.2 | 65.926 | 135 | 46 | 0 | 62 | 196 | 1 | 135 | 1.54e-57 | 191 |
| Msa0436750 | AT3G07030.3 | 65.926 | 135 | 46 | 0 | 62 | 196 | 1 | 135 | 1.54e-57 | 191 |
| Msa0436750 | AT3G07030.4 | 65.926 | 135 | 46 | 0 | 62 | 196 | 1 | 135 | 1.86e-57 | 191 |
| Msa0436750 | AT3G07030.1 | 65.926 | 135 | 46 | 0 | 62 | 196 | 1 | 135 | 3.92e-57 | 189 |
| Msa0436750 | AT3G07030.5 | 65.926 | 135 | 46 | 0 | 62 | 196 | 1 | 135 | 7.20e-57 | 190 |
Find 125 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTTCATATTCATTTAA+AGG | 0.086684 | 3_2:+90514006 | None:intergenic |
| GTGCATGGGGTCGTGCTTTC+CGG | 0.114627 | 3_2:-90513407 | Msa0436750:CDS |
| CACAAAATTGGAATATTTAT+AGG | 0.238360 | 3_2:+90512647 | None:intergenic |
| CGGCCATGTTCCTGCAGTTT+TGG | 0.243075 | 3_2:-90512822 | Msa0436750:three_prime_UTR |
| AGGAGAATAAAACACAAAAT+TGG | 0.250041 | 3_2:+90512635 | None:intergenic |
| TGAGTTGAGTTGACAGGTTT+TGG | 0.270816 | 3_2:+90515763 | None:intergenic |
| CTGCATCAGAACACTATTAT+TGG | 0.280228 | 3_2:-90514884 | Msa0436750:CDS |
| AGCGAGGGGCTGGGTGGCTA+TGG | 0.298249 | 3_2:+90515712 | None:intergenic |
| ACAAAATTGGAATATTTATA+GGG | 0.308857 | 3_2:+90512648 | None:intergenic |
| GCAGAGGGCGTGGCCGTGCA+TGG | 0.313343 | 3_2:-90513422 | Msa0436750:CDS |
| AGGGGCAGGGGCAGAGGTAG+AGG | 0.315006 | 3_2:-90513842 | Msa0436750:intron |
| CGTGGCCGTGGAAGGGGCAG+GGG | 0.321802 | 3_2:-90513854 | Msa0436750:CDS |
| TGCATGGGGTCGTGCTTTCC+GGG | 0.322620 | 3_2:-90513406 | Msa0436750:CDS |
| CAGAGGGCGTGGCCGTGCAT+GGG | 0.335065 | 3_2:-90513421 | Msa0436750:CDS |
| CGTGGAAGGGGCAGGGGCAG+AGG | 0.342679 | 3_2:-90513848 | Msa0436750:CDS |
| GACGATTACTGAGCTAATTA+AGG | 0.344294 | 3_2:-90515014 | Msa0436750:intron |
| GTTGATAGGGCTATCTGCCT+TGG | 0.366788 | 3_2:+90515524 | None:intergenic |
| GCGAGGGGCTGGGTGGCTAT+GGG | 0.367507 | 3_2:+90515713 | None:intergenic |
| CTCTTCCCCTTCCACGACCT+TGG | 0.370286 | 3_2:+90512957 | None:intergenic |
| TGCTTACCGCGTGGGGCAGG+TGG | 0.371445 | 3_2:+90513321 | None:intergenic |
| CTCTCTCATGCTTACCGCGT+GGG | 0.372765 | 3_2:+90513313 | None:intergenic |
| GCTATGGTGCCCAGCCGGTT+GGG | 0.375717 | 3_2:-90513371 | Msa0436750:CDS |
| GGCGTGGCCGTGGAAGGGGC+AGG | 0.380319 | 3_2:-90513856 | Msa0436750:CDS |
| ATGGAAGAGAGCGAGGGGCT+GGG | 0.406409 | 3_2:+90515703 | None:intergenic |
| CAGATATCAACCTCCTCTTC+CGG | 0.410668 | 3_2:-90514043 | Msa0436750:CDS |
| GGCTATGGTGCCCAGCCGGT+TGG | 0.410845 | 3_2:-90513372 | Msa0436750:CDS |
| TTGATAGGGCTATCTGCCTT+GGG | 0.411012 | 3_2:+90515525 | None:intergenic |
| TCATGCTTACCGCGTGGGGC+AGG | 0.415819 | 3_2:+90513318 | None:intergenic |
| GCTTACCGCGTGGGGCAGGT+GGG | 0.418616 | 3_2:+90513322 | None:intergenic |
| CGTGGAAGGGGAAGAGGCCG+TGG | 0.425270 | 3_2:-90512950 | Msa0436750:CDS |
| GCTCGCCAAGGATGCGAGGA+AGG | 0.425647 | 3_2:-90513880 | Msa0436750:CDS |
| GATGGAAGAGAGCGAGGGGC+TGG | 0.425790 | 3_2:+90515702 | None:intergenic |
| CAAGGTCGTGGAAGGGGAAG+AGG | 0.427428 | 3_2:-90512956 | Msa0436750:CDS |
| TCTTTGTAGGAATGTACAAT+GGG | 0.439627 | 3_2:-90513491 | Msa0436750:intron |
| CGAGGGGCTGGGTGGCTATG+GGG | 0.442196 | 3_2:+90515714 | None:intergenic |
| GCGTGGCCGTGGAAGGGGCA+GGG | 0.447438 | 3_2:-90513855 | Msa0436750:CDS |
| GGCTATGGTGGCAGAGGGCG+TGG | 0.451114 | 3_2:-90513432 | Msa0436750:CDS |
| AGGGGAAGAGGCCGTGGACG+TGG | 0.457525 | 3_2:-90512944 | Msa0436750:CDS |
| TCGCCAAGGATGCGAGGAAG+GGG | 0.461675 | 3_2:-90513878 | Msa0436750:CDS |
| CGTGGACGTGGTCGTGATGC+TGG | 0.462697 | 3_2:-90512932 | Msa0436750:CDS |
| TATGATGGTGGACGTGGCTA+TGG | 0.467843 | 3_2:-90513447 | Msa0436750:CDS |
| GGACGTGGCTATGGTGGCAG+AGG | 0.470972 | 3_2:-90513438 | Msa0436750:CDS |
| CTTACCGCGTGGGGCAGGTG+GGG | 0.471319 | 3_2:+90513323 | None:intergenic |
| CTCGCCAAGGATGCGAGGAA+GGG | 0.475876 | 3_2:-90513879 | Msa0436750:CDS |
| GTTTCTCATCCTTCCTTGAG+TGG | 0.479166 | 3_2:+90515482 | None:intergenic |
| TTACTTGCAGGCCAAGGTCG+TGG | 0.495476 | 3_2:-90512968 | Msa0436750:intron |
| TACTTTGTCAAAGAAAGAGC+TGG | 0.498781 | 3_2:-90514684 | Msa0436750:CDS |
| TGTCATAATACCCAACCGGC+TGG | 0.498971 | 3_2:+90513361 | None:intergenic |
| GCAGGCCAAGGTCGTGGAAG+GGG | 0.500455 | 3_2:-90512962 | Msa0436750:intron |
| CTCTGCCCCTGCCCCTTCCA+CGG | 0.500854 | 3_2:+90513849 | None:intergenic |
| GTTTGTTAATTCAGATGGAT+AGG | 0.501024 | 3_2:-90515566 | Msa0436750:intron |
| TTCTTTGTAGGAATGTACAA+TGG | 0.504434 | 3_2:-90513492 | Msa0436750:intron |
| CGGGGACGAGGACGTGGCTA+TGG | 0.506197 | 3_2:-90513387 | Msa0436750:CDS |
| CAATGAAAACATACGGAAGA+AGG | 0.509927 | 3_2:+90514819 | None:intergenic |
| GCTTTCCGGGGACGAGGACG+TGG | 0.517005 | 3_2:-90513393 | Msa0436750:CDS |
| GAAATCGTTCTCAAAGCAAT+GGG | 0.517050 | 3_2:-90515058 | Msa0436750:CDS |
| TTTACTTGATCAGCCGGAAG+AGG | 0.519336 | 3_2:+90514030 | None:intergenic |
| TTAAAATTATAAATGTTACA+AGG | 0.524255 | 3_2:+90512785 | None:intergenic |
| CCATTGTCATAATACCCAAC+CGG | 0.524799 | 3_2:+90513357 | None:intergenic |
| GGTCGTGCTTTCCGGGGACG+AGG | 0.525875 | 3_2:-90513399 | Msa0436750:CDS |
| TGGTTTCAATTTGAGGCCGA+GGG | 0.528432 | 3_2:+90515806 | None:intergenic |
| ATTTGAGTCGTTCAGTGTTG+CGG | 0.530588 | 3_2:-90512842 | Msa0436750:three_prime_UTR |
| GAATATGGTGATGGTTATGA+TGG | 0.530946 | 3_2:-90513462 | Msa0436750:CDS |
| CATAGCCACGTCCTCGTCCC+CGG | 0.531366 | 3_2:+90513388 | None:intergenic |
| GTGGTTTCAATTTGAGGCCG+AGG | 0.533096 | 3_2:+90515805 | None:intergenic |
| ACGTGGCTATGGTGCCCAGC+CGG | 0.540009 | 3_2:-90513376 | Msa0436750:CDS |
| AGAGGGCGTGGCCGTGCATG+GGG | 0.540930 | 3_2:-90513420 | Msa0436750:CDS |
| AGCAGCTGCTTAGTTAGAAG+AGG | 0.543321 | 3_2:-90512903 | Msa0436750:exon |
| TCACTCACGCTCAACACAAA+CGG | 0.546528 | 3_2:-90515679 | Msa0436750:intron |
| TATCTCTTTCTCTCTCCCCT+CGG | 0.548601 | 3_2:-90515822 | Msa0436750:CDS |
| GAGCTGGATACATCCTCCAC+AGG | 0.550506 | 3_2:-90514668 | Msa0436750:CDS |
| TTGCAGGCCAAGGTCGTGGA+AGG | 0.551070 | 3_2:-90512964 | Msa0436750:intron |
| AGAAATCGTTCTCAAAGCAA+TGG | 0.552556 | 3_2:-90515059 | Msa0436750:CDS |
| TAAAATTATAAATGTTACAA+GGG | 0.558311 | 3_2:+90512786 | None:intergenic |
| GTCATAATACCCAACCGGCT+GGG | 0.558897 | 3_2:+90513362 | None:intergenic |
| GGAAAGCACGACCCCATGCA+CGG | 0.559235 | 3_2:+90513409 | None:intergenic |
| AACTACAAAACCAAAACTGC+AGG | 0.559355 | 3_2:+90512812 | None:intergenic |
| ACTCTGTGAGTTGAGTTGAC+AGG | 0.560519 | 3_2:+90515757 | None:intergenic |
| CAACTGATATAACTGACACA+TGG | 0.565866 | 3_2:-90514859 | Msa0436750:CDS |
| GACGTGGCTATGGTGGCAGA+GGG | 0.566506 | 3_2:-90513437 | Msa0436750:CDS |
| GAGTGAGATGGAAGAGAGCG+AGG | 0.567145 | 3_2:+90515696 | None:intergenic |
| AAAATTATAAATGTTACAAG+GGG | 0.579415 | 3_2:+90512787 | None:intergenic |
| ACATGGGAACCACTTGAAGA+AGG | 0.580775 | 3_2:-90514842 | Msa0436750:CDS |
| GGAAGAAGGCCTTCTTCAAG+TGG | 0.583553 | 3_2:+90514833 | None:intergenic |
| ACCTTTAAATGAATATGAAG+AGG | 0.587328 | 3_2:-90514007 | Msa0436750:CDS |
| GATGGTTATGATGGTGGACG+TGG | 0.587716 | 3_2:-90513453 | Msa0436750:CDS |
| CGCCAAGGATGCGAGGAAGG+GGG | 0.588165 | 3_2:-90513877 | Msa0436750:CDS |
| TTAAATGAATATGAAGAGGA+AGG | 0.589261 | 3_2:-90514003 | Msa0436750:CDS |
| TCCTTCCTTGAGTGGTAATG+CGG | 0.591117 | 3_2:+90515490 | None:intergenic |
| ACTTGATCAGCCGGAAGAGG+AGG | 0.591207 | 3_2:+90514033 | None:intergenic |
| TATGGTGATGGTTATGATGG+TGG | 0.591644 | 3_2:-90513459 | Msa0436750:CDS |
| GCAGCTGCTTAGTTAGAAGA+GGG | 0.593490 | 3_2:-90512902 | Msa0436750:exon |
| GATGGTGGACGTGGCTATGG+TGG | 0.594069 | 3_2:-90513444 | Msa0436750:CDS |
| TGTGTTGAGCGTGAGTGAGA+TGG | 0.600798 | 3_2:+90515684 | None:intergenic |
| AACTGATATAACTGACACAT+GGG | 0.600887 | 3_2:-90514858 | Msa0436750:CDS |
| AAACCAAAACTGCAGGAACA+TGG | 0.602157 | 3_2:+90512819 | None:intergenic |
| AAATAAACAAATAAGCAAAG+AGG | 0.602755 | 3_2:+90512876 | None:intergenic |
| TGCAGGCCAAGGTCGTGGAA+GGG | 0.605445 | 3_2:-90512963 | Msa0436750:intron |
| AATTATAAATGTTACAAGGG+GGG | 0.606874 | 3_2:+90512789 | None:intergenic |
| GAGATCCGCATTACCACTCA+AGG | 0.607382 | 3_2:-90515495 | Msa0436750:CDS |
| GAAGAGAGCGAGGGGCTGGG+TGG | 0.607690 | 3_2:+90515706 | None:intergenic |
| TTCAGATGGATAGGTATCAG+AGG | 0.607820 | 3_2:-90515557 | Msa0436750:intron |
| TCAGATGGATAGGTATCAGA+GGG | 0.613414 | 3_2:-90515556 | Msa0436750:intron |
| TCTCTCATGCTTACCGCGTG+GGG | 0.614307 | 3_2:+90513314 | None:intergenic |
| CCGGTTGGGTATTATGACAA+TGG | 0.619666 | 3_2:-90513357 | Msa0436750:CDS |
| AATGAATATGAAGAGGAAGG+AGG | 0.621567 | 3_2:-90514000 | Msa0436750:intron |
| GCATGGGGTCGTGCTTTCCG+GGG | 0.624471 | 3_2:-90513405 | Msa0436750:CDS |
| AGTGAGATGGAAGAGAGCGA+GGG | 0.624797 | 3_2:+90515697 | None:intergenic |
| CTAACTAAGCAGCTGCTACA+CGG | 0.626764 | 3_2:+90512909 | None:intergenic |
| GATACACAGAAGGCTCGCCA+AGG | 0.633168 | 3_2:-90513892 | Msa0436750:intron |
| TCCGCATTACCACTCAAGGA+AGG | 0.635560 | 3_2:-90515491 | Msa0436750:CDS |
| CAGCATCACGACCACGTCCA+CGG | 0.637764 | 3_2:+90512933 | None:intergenic |
| GAAGGCTCGCCAAGGATGCG+AGG | 0.639147 | 3_2:-90513884 | Msa0436750:CDS |
| GTGAGATGGAAGAGAGCGAG+GGG | 0.643963 | 3_2:+90515698 | None:intergenic |
| TGAAAGTTCATACCCTGTGG+AGG | 0.649730 | 3_2:+90514655 | None:intergenic |
| GAGAGAAAGAGATACACGCG+AGG | 0.650816 | 3_2:+90515831 | None:intergenic |
| TTTGTAGGAATGTACAATGG+GGG | 0.656698 | 3_2:-90513489 | Msa0436750:intron |
| GATGGATAGGTATCAGAGGG+TGG | 0.667174 | 3_2:-90515553 | Msa0436750:CDS |
| AAATTATAAATGTTACAAGG+GGG | 0.667194 | 3_2:+90512788 | None:intergenic |
| AGCTGGATACATCCTCCACA+GGG | 0.668533 | 3_2:-90514667 | Msa0436750:intron |
| TCAGAGGGTGGAGAAACCCA+AGG | 0.675762 | 3_2:-90515541 | Msa0436750:CDS |
| GGTTTCAATTTGAGGCCGAG+GGG | 0.692431 | 3_2:+90515807 | None:intergenic |
| CTTTGTAGGAATGTACAATG+GGG | 0.692917 | 3_2:-90513490 | Msa0436750:intron |
| AGAGAAAGAGATACACGCGA+GGG | 0.694622 | 3_2:+90515832 | None:intergenic |
| GATGCCCCACCTGCCCCACG+CGG | 0.736589 | 3_2:-90513327 | Msa0436750:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAAAAAAATCACT+CGG | + | chr3_2:90513233-90513252 | None:intergenic | 10.0% |
| !! | AAAGGAAATTAAATAATTAT+AGG | - | chr3_2:90514776-90514795 | Msa0436750:intron | 10.0% |
| !! | AAGGAAATTAAATAATTATA+GGG | - | chr3_2:90514777-90514796 | Msa0436750:intron | 10.0% |
| !!! | CTTATTTGTTTATTTTATTT+GGG | - | chr3_2:90515608-90515627 | Msa0436750:intron | 10.0% |
| !! | TAAAATTATAAATGTTACAA+GGG | + | chr3_2:90515693-90515712 | None:intergenic | 10.0% |
| !! | TTAAAATTATAAATGTTACA+AGG | + | chr3_2:90515694-90515713 | None:intergenic | 10.0% |
| !!! | TAAAATATGTTATATGTTTT+CGG | - | chr3_2:90515804-90515823 | Msa0436750:CDS | 10.0% |
| !! | AGTGAATTTATTTAGATTAT+AGG | - | chr3_2:90513252-90513271 | Msa0436750:intron | 15.0% |
| !!! | TATTTCTCTTTTATTTTGTT+TGG | - | chr3_2:90513277-90513296 | Msa0436750:intron | 15.0% |
| !!! | TCTTAATTCAACTAATATTT+TGG | - | chr3_2:90513330-90513349 | Msa0436750:CDS | 15.0% |
| !!! | TTAACTTTTGTTTTCTATTA+AGG | - | chr3_2:90514265-90514284 | Msa0436750:intron | 15.0% |
| !!! | TTTTAAAAAAAATCAAAGAC+AGG | + | chr3_2:90514514-90514533 | None:intergenic | 15.0% |
| !! | TACTTATAAAAAATGTTCAA+AGG | - | chr3_2:90514758-90514777 | Msa0436750:intron | 15.0% |
| !! | ATAATTATAGGGATTAAATA+TGG | - | chr3_2:90514788-90514807 | Msa0436750:intron | 15.0% |
| !!! | ATAAGAAAATTGTGTTTTAA+AGG | + | chr3_2:90514950-90514969 | None:intergenic | 15.0% |
| !!! | GCTTATTTGTTTATTTTATT+TGG | - | chr3_2:90515607-90515626 | Msa0436750:intron | 15.0% |
| !! | AAAATTATAAATGTTACAAG+GGG | + | chr3_2:90515692-90515711 | None:intergenic | 15.0% |
| !!! | TTTTCTTATAGAAATTTTTG+CGG | - | chr3_2:90515778-90515797 | Msa0436750:CDS | 15.0% |
| !! | ACAAAATTGGAATATTTATA+GGG | + | chr3_2:90515831-90515850 | None:intergenic | 15.0% |
| !! | ACATTAATTGAATGAATCTA+GGG | + | chr3_2:90512837-90512856 | None:intergenic | 20.0% |
| !! | AACATTAATTGAATGAATCT+AGG | + | chr3_2:90512838-90512857 | None:intergenic | 20.0% |
| !! | GTTTCGATTTAATTGTTTAT+CGG | - | chr3_2:90512855-90512874 | Msa0436750:three_prime_UTR | 20.0% |
| !!! | TAATATTTTGGTATTTTGTG+TGG | - | chr3_2:90513342-90513361 | Msa0436750:CDS | 20.0% |
| !! | AAGTAACTAAATGTAATCTA+AGG | + | chr3_2:90514018-90514037 | None:intergenic | 20.0% |
| !! | ACAAAATTATCAAACATAGT+GGG | + | chr3_2:90514360-90514379 | None:intergenic | 20.0% |
| !! | AACAAAATTATCAAACATAG+TGG | + | chr3_2:90514361-90514380 | None:intergenic | 20.0% |
| !! | AATGATATATGCAAGAAAAT+AGG | - | chr3_2:90514833-90514852 | Msa0436750:CDS | 20.0% |
| !! | CTACAAAATTTATTCTTTGT+AGG | - | chr3_2:90514972-90514991 | Msa0436750:intron | 20.0% |
| !! | TTTGATGTTGTATTATCATA+TGG | - | chr3_2:90515192-90515211 | Msa0436750:intron | 20.0% |
| !! | AAATAAACAAATAAGCAAAG+AGG | + | chr3_2:90515603-90515622 | None:intergenic | 20.0% |
| !! | AAATTATAAATGTTACAAGG+GGG | + | chr3_2:90515691-90515710 | None:intergenic | 20.0% |
| !! | CACAAAATTGGAATATTTAT+AGG | + | chr3_2:90515832-90515851 | None:intergenic | 20.0% |
| !! | TTTGTGTTTGTTAATTCAGA+TGG | - | chr3_2:90512905-90512924 | Msa0436750:exon | 25.0% |
| !!! | TTAGATTTTTTAATGTTCCG+AGG | - | chr3_2:90513154-90513173 | Msa0436750:intron | 25.0% |
| !!! | TAGATTTTTTAATGTTCCGA+GGG | - | chr3_2:90513155-90513174 | Msa0436750:intron | 25.0% |
| ! | TCTGAAAAACATAGACATAT+CGG | + | chr3_2:90513558-90513577 | None:intergenic | 25.0% |
| ! | GTGAAAACAATGAAAACATA+CGG | + | chr3_2:90513667-90513686 | None:intergenic | 25.0% |
| !! | TTTATGCCTTATCTTTTGAT+TGG | - | chr3_2:90513882-90513901 | Msa0436750:CDS | 25.0% |
| ! | TTCAATGTAGATTGATAGAA+GGG | - | chr3_2:90514186-90514205 | Msa0436750:intron | 25.0% |
| ! | TTCTTTAAATGTATTCTCTG+TGG | - | chr3_2:90514384-90514403 | Msa0436750:intron | 25.0% |
| ! | ACCTTTAAATGAATATGAAG+AGG | - | chr3_2:90514469-90514488 | Msa0436750:intron | 25.0% |
| ! | TCCTCTTCATATTCATTTAA+AGG | + | chr3_2:90514473-90514492 | None:intergenic | 25.0% |
| ! | TTAAATGAATATGAAGAGGA+AGG | - | chr3_2:90514473-90514492 | Msa0436750:intron | 25.0% |
| ! | GAAAATAGGAAATATCTACA+TGG | - | chr3_2:90514847-90514866 | Msa0436750:CDS | 25.0% |
| ! | TTCTGATCATTCTACAATAT+AGG | + | chr3_2:90514900-90514919 | None:intergenic | 25.0% |
| ! | ACTAACAAATAAATACGACA+AGG | + | chr3_2:90515343-90515362 | None:intergenic | 25.0% |
| !!! | TATTTGTTAGTTTTCTTTGC+TGG | - | chr3_2:90515352-90515371 | Msa0436750:intron | 25.0% |
| ! | AATTATAAATGTTACAAGGG+GGG | + | chr3_2:90515690-90515709 | None:intergenic | 25.0% |
| ! | TGTTTTGTGGTTTCAATTTG+AGG | + | chr3_2:90512680-90512699 | None:intergenic | 30.0% |
| ! | GTTTGTTAATTCAGATGGAT+AGG | - | chr3_2:90512910-90512929 | Msa0436750:exon | 30.0% |
| AACACTAACTTGAAAAAGAG+TGG | + | chr3_2:90513036-90513055 | None:intergenic | 30.0% | |
| AATCAATCAATTATGTCCCT+CGG | + | chr3_2:90513174-90513193 | None:intergenic | 30.0% | |
| ACCAACCAATTTAATCTGTA+GGG | + | chr3_2:90513507-90513526 | None:intergenic | 30.0% | |
| AAAAACATAGACATATCGGT+CGG | + | chr3_2:90513554-90513573 | None:intergenic | 30.0% | |
| !! | ATGTCTATGTTTTTCAGAGA+AGG | - | chr3_2:90513560-90513579 | Msa0436750:intron | 30.0% |
| AACTGATATAACTGACACAT+GGG | - | chr3_2:90513618-90513637 | Msa0436750:intron | 30.0% | |
| ! | TTCATTTTACTTGTGCAGTT+TGG | - | chr3_2:90513738-90513757 | Msa0436750:intron | 30.0% |
| ACTAAGCCAATCAAAAGATA+AGG | + | chr3_2:90513891-90513910 | None:intergenic | 30.0% | |
| !!! | TTTTTGAAGCAAACCACTTA+AGG | - | chr3_2:90513913-90513932 | Msa0436750:intron | 30.0% |
| CTTCAATGTAGATTGATAGA+AGG | - | chr3_2:90514185-90514204 | Msa0436750:intron | 30.0% | |
| TCACTTGTATAAATCATGAC+TGG | + | chr3_2:90514327-90514346 | None:intergenic | 30.0% | |
| ! | GTGAAAAGTTGTGATTTTCA+TGG | - | chr3_2:90514536-90514555 | Msa0436750:intron | 30.0% |
| !! | CTGTAATTTTGATACACAGA+AGG | - | chr3_2:90514574-90514593 | Msa0436750:intron | 30.0% |
| GATTGTATGACTTGAGAATA+AGG | - | chr3_2:90514692-90514711 | Msa0436750:CDS | 30.0% | |
| ! | ATGACTTGAGAATAAGGTTT+TGG | - | chr3_2:90514698-90514717 | Msa0436750:CDS | 30.0% |
| AATAGGAAATATCTACATGG+AGG | - | chr3_2:90514850-90514869 | Msa0436750:CDS | 30.0% | |
| TTCTTTGTAGGAATGTACAA+TGG | - | chr3_2:90514984-90515003 | Msa0436750:intron | 30.0% | |
| TCTTTGTAGGAATGTACAAT+GGG | - | chr3_2:90514985-90515004 | Msa0436750:intron | 30.0% | |
| ! | TCTTCTGTCGCTTATTTAAT+AGG | + | chr3_2:90515288-90515307 | None:intergenic | 30.0% |
| AATACGACAAGGAAAACAAT+TGG | + | chr3_2:90515332-90515351 | None:intergenic | 30.0% | |
| !!! | GGATATGGGATTTTGTTTTG+TGG | + | chr3_2:90512693-90512712 | None:intergenic | 35.0% |
| ! | TGAATGAATCTAGGGTTTGA+AGG | + | chr3_2:90512829-90512848 | None:intergenic | 35.0% |
| ! | GGATCTCATTTTCGTTGATA+GGG | + | chr3_2:90512968-90512987 | None:intergenic | 35.0% |
| ! | TCTAAAGTCACACATATGAG+TGG | + | chr3_2:90513116-90513135 | None:intergenic | 35.0% |
| AGAAATCGTTCTCAAAGCAA+TGG | - | chr3_2:90513417-90513436 | Msa0436750:CDS | 35.0% | |
| GAAATCGTTCTCAAAGCAAT+GGG | - | chr3_2:90513418-90513437 | Msa0436750:CDS | 35.0% | |
| GACGATTACTGAGCTAATTA+AGG | - | chr3_2:90513462-90513481 | Msa0436750:CDS | 35.0% | |
| GAGTTCCCTACAGATTAAAT+TGG | - | chr3_2:90513499-90513518 | Msa0436750:intron | 35.0% | |
| TCCCTACAGATTAAATTGGT+TGG | - | chr3_2:90513503-90513522 | Msa0436750:intron | 35.0% | |
| CACCAACCAATTTAATCTGT+AGG | + | chr3_2:90513508-90513527 | None:intergenic | 35.0% | |
| !! | GTTTTTCAGAGAAGGATTGT+TGG | - | chr3_2:90513568-90513587 | Msa0436750:intron | 35.0% |
| CTGCATCAGAACACTATTAT+TGG | - | chr3_2:90513592-90513611 | Msa0436750:intron | 35.0% | |
| CAACTGATATAACTGACACA+TGG | - | chr3_2:90513617-90513636 | Msa0436750:intron | 35.0% | |
| CAATGAAAACATACGGAAGA+AGG | + | chr3_2:90513660-90513679 | None:intergenic | 35.0% | |
| TAGTTTATGTGTGCATAGCA+TGG | - | chr3_2:90513704-90513723 | Msa0436750:intron | 35.0% | |
| AGTTTATGTGTGCATAGCAT+GGG | - | chr3_2:90513705-90513724 | Msa0436750:intron | 35.0% | |
| TACTTTGTCAAAGAAAGAGC+TGG | - | chr3_2:90513792-90513811 | Msa0436750:intron | 35.0% | |
| AAGCAAACCACTTAAGGATT+AGG | - | chr3_2:90513919-90513938 | Msa0436750:intron | 35.0% | |
| CATGTTTCCTAATCCTTAAG+TGG | + | chr3_2:90513929-90513948 | None:intergenic | 35.0% | |
| TAGGAAACATGTTAGCTAAG+TGG | - | chr3_2:90513938-90513957 | Msa0436750:intron | 35.0% | |
| ATGTTAATCTCAGTCACCAA+CGG | + | chr3_2:90513985-90514004 | None:intergenic | 35.0% | |
| ! | ATCAAACATAGTGGGAAAGA+CGG | + | chr3_2:90514352-90514371 | None:intergenic | 35.0% |
| ! | AAAGGTTTTACTTGATCAGC+CGG | + | chr3_2:90514455-90514474 | None:intergenic | 35.0% |
| AATGAATATGAAGAGGAAGG+AGG | - | chr3_2:90514476-90514495 | Msa0436750:intron | 35.0% | |
| TGATGTAGTCAATCACATGT+AGG | + | chr3_2:90514814-90514833 | None:intergenic | 35.0% | |
| CTTTGTAGGAATGTACAATG+GGG | - | chr3_2:90514986-90515005 | Msa0436750:intron | 35.0% | |
| TTTGTAGGAATGTACAATGG+GGG | - | chr3_2:90514987-90515006 | Msa0436750:intron | 35.0% | |
| !! | GAATATGGTGATGGTTATGA+TGG | - | chr3_2:90515014-90515033 | Msa0436750:intron | 35.0% |
| AGCGACAGAAGAAAATTACT+TGG | - | chr3_2:90515296-90515315 | Msa0436750:intron | 35.0% | |
| CTACAACGATTACTCTAGTA+AGG | + | chr3_2:90515394-90515413 | None:intergenic | 35.0% | |
| ATGCTGTGTTAATTACTTGC+AGG | - | chr3_2:90515496-90515515 | Msa0436750:CDS | 35.0% | |
| AACTACAAAACCAAAACTGC+AGG | + | chr3_2:90515667-90515686 | None:intergenic | 35.0% | |
| !!! | TTGACAGGTTTTGGGGATAT+GGG | + | chr3_2:90512707-90512726 | None:intergenic | 40.0% |
| !!! | AGTTGAGTTGACAGGTTTTG+GGG | + | chr3_2:90512714-90512733 | None:intergenic | 40.0% |
| !!! | GAGTTGAGTTGACAGGTTTT+GGG | + | chr3_2:90512715-90512734 | None:intergenic | 40.0% |
| !!! | TGAGTTGAGTTGACAGGTTT+TGG | + | chr3_2:90512716-90512735 | None:intergenic | 40.0% |
| TTCAGATGGATAGGTATCAG+AGG | - | chr3_2:90512919-90512938 | Msa0436750:CDS | 40.0% | |
| TCAGATGGATAGGTATCAGA+GGG | - | chr3_2:90512920-90512939 | Msa0436750:CDS | 40.0% | |
| ! | CGGATCTCATTTTCGTTGAT+AGG | + | chr3_2:90512969-90512988 | None:intergenic | 40.0% |
| TCACTCGGCAATTAATACAC+TGG | + | chr3_2:90513218-90513237 | None:intergenic | 40.0% | |
| ! | GCACTATGTGTGTTTTCTGT+AGG | - | chr3_2:90513381-90513400 | Msa0436750:CDS | 40.0% |
| ! | GTGTGTTTTCTGTAGGAGAA+AGG | - | chr3_2:90513388-90513407 | Msa0436750:CDS | 40.0% |
| ACTGAGCTAATTAAGGTGAG+AGG | - | chr3_2:90513469-90513488 | Msa0436750:CDS | 40.0% | |
| CTGAGCTAATTAAGGTGAGA+GGG | - | chr3_2:90513470-90513489 | Msa0436750:CDS | 40.0% | |
| TCATGAAAGTTCATACCCTG+TGG | + | chr3_2:90513827-90513846 | None:intergenic | 40.0% | |
| GCATTTACACAAACACAGAC+CGG | + | chr3_2:90514084-90514103 | None:intergenic | 40.0% | |
| ATGTTAGACCCTTGACTTCA+AGG | - | chr3_2:90514112-90514131 | Msa0436750:intron | 40.0% | |
| ! | TACAATGGGGGTATGGAATA+TGG | - | chr3_2:90514999-90515018 | Msa0436750:intron | 40.0% |
| !! | TATGGTGATGGTTATGATGG+TGG | - | chr3_2:90515017-90515036 | Msa0436750:CDS | 40.0% |
| CCATTGTCATAATACCCAAC+CGG | + | chr3_2:90515122-90515141 | None:intergenic | 40.0% | |
| TGTTAATTACTTGCAGGCCA+AGG | - | chr3_2:90515502-90515521 | Msa0436750:CDS | 40.0% | |
| ATTTGAGTCGTTCAGTGTTG+CGG | - | chr3_2:90515634-90515653 | Msa0436750:intron | 40.0% | |
| AAACCAAAACTGCAGGAACA+TGG | + | chr3_2:90515660-90515679 | None:intergenic | 40.0% | |
| AGAGAAAGAGATACACGCGA+GGG | + | chr3_2:90512647-90512666 | None:intergenic | 45.0% | |
| TATCTCTTTCTCTCTCCCCT+CGG | - | chr3_2:90512654-90512673 | Msa0436750:three_prime_UTR | 45.0% | |
| ! | TGGTTTCAATTTGAGGCCGA+GGG | + | chr3_2:90512673-90512692 | None:intergenic | 45.0% |
| !!! | GTTGACAGGTTTTGGGGATA+TGG | + | chr3_2:90512708-90512727 | None:intergenic | 45.0% |
| !! | ACTCTGTGAGTTGAGTTGAC+AGG | + | chr3_2:90512722-90512741 | None:intergenic | 45.0% |
| TCACTCACGCTCAACACAAA+CGG | - | chr3_2:90512797-90512816 | Msa0436750:three_prime_UTR | 45.0% | |
| TTGATAGGGCTATCTGCCTT+GGG | + | chr3_2:90512954-90512973 | None:intergenic | 45.0% | |
| ! | TCCTTCCTTGAGTGGTAATG+CGG | + | chr3_2:90512989-90513008 | None:intergenic | 45.0% |
| GTTTCTCATCCTTCCTTGAG+TGG | + | chr3_2:90512997-90513016 | None:intergenic | 45.0% | |
| ACATGGGAACCACTTGAAGA+AGG | - | chr3_2:90513634-90513653 | Msa0436750:intron | 45.0% | |
| TGAAAGTTCATACCCTGTGG+AGG | + | chr3_2:90513824-90513843 | None:intergenic | 45.0% | |
| ACCACACTCCTTGAAGTCAA+GGG | + | chr3_2:90514123-90514142 | None:intergenic | 45.0% | |
| TACCACACTCCTTGAAGTCA+AGG | + | chr3_2:90514124-90514143 | None:intergenic | 45.0% | |
| CAGATATCAACCTCCTCTTC+CGG | - | chr3_2:90514433-90514452 | Msa0436750:intron | 45.0% | |
| TTTACTTGATCAGCCGGAAG+AGG | + | chr3_2:90514449-90514468 | None:intergenic | 45.0% | |
| AGGAATGTACAATGGGGGTA+TGG | - | chr3_2:90514992-90515011 | Msa0436750:intron | 45.0% | |
| CCGGTTGGGTATTATGACAA+TGG | - | chr3_2:90515119-90515138 | Msa0436750:intron | 45.0% | |
| CTAACTAAGCAGCTGCTACA+CGG | + | chr3_2:90515570-90515589 | None:intergenic | 45.0% | |
| AGCAGCTGCTTAGTTAGAAG+AGG | - | chr3_2:90515573-90515592 | Msa0436750:intron | 45.0% | |
| GCAGCTGCTTAGTTAGAAGA+GGG | - | chr3_2:90515574-90515593 | Msa0436750:intron | 45.0% | |
| GAGAGAAAGAGATACACGCG+AGG | + | chr3_2:90512648-90512667 | None:intergenic | 50.0% | |
| ! | GGTTTCAATTTGAGGCCGAG+GGG | + | chr3_2:90512672-90512691 | None:intergenic | 50.0% |
| ! | GTGGTTTCAATTTGAGGCCG+AGG | + | chr3_2:90512674-90512693 | None:intergenic | 50.0% |
| AGTGAGATGGAAGAGAGCGA+GGG | + | chr3_2:90512782-90512801 | None:intergenic | 50.0% | |
| TGTGTTGAGCGTGAGTGAGA+TGG | + | chr3_2:90512795-90512814 | None:intergenic | 50.0% | |
| GATGGATAGGTATCAGAGGG+TGG | - | chr3_2:90512923-90512942 | Msa0436750:CDS | 50.0% | |
| ! | GTTGATAGGGCTATCTGCCT+TGG | + | chr3_2:90512955-90512974 | None:intergenic | 50.0% |
| GAGATCCGCATTACCACTCA+AGG | - | chr3_2:90512981-90513000 | Msa0436750:intron | 50.0% | |
| TCCGCATTACCACTCAAGGA+AGG | - | chr3_2:90512985-90513004 | Msa0436750:intron | 50.0% | |
| GGAAGAAGGCCTTCTTCAAG+TGG | + | chr3_2:90513646-90513665 | None:intergenic | 50.0% | |
| AGCTGGATACATCCTCCACA+GGG | - | chr3_2:90513809-90513828 | Msa0436750:intron | 50.0% | |
| ACACTTCAGAGTGAAGCCGT+TGG | - | chr3_2:90513966-90513985 | Msa0436750:intron | 50.0% | |
| ! | CCATGTGTTACTGCTGTGTC+CGG | - | chr3_2:90514062-90514081 | Msa0436750:intron | 50.0% |
| ACCCTTGACTTCAAGGAGTG+TGG | - | chr3_2:90514119-90514138 | Msa0436750:intron | 50.0% | |
| ! | GGGGGTATGGAATATGGTGA+TGG | - | chr3_2:90515005-90515024 | Msa0436750:intron | 50.0% |
| !! | GATGGTTATGATGGTGGACG+TGG | - | chr3_2:90515023-90515042 | Msa0436750:CDS | 50.0% |
| !! | TATGATGGTGGACGTGGCTA+TGG | - | chr3_2:90515029-90515048 | Msa0436750:CDS | 50.0% |
| GTCATAATACCCAACCGGCT+GGG | + | chr3_2:90515117-90515136 | None:intergenic | 50.0% | |
| TGTCATAATACCCAACCGGC+TGG | + | chr3_2:90515118-90515137 | None:intergenic | 50.0% | |
| GTGAGATGGAAGAGAGCGAG+GGG | + | chr3_2:90512781-90512800 | None:intergenic | 55.0% | |
| GAGTGAGATGGAAGAGAGCG+AGG | + | chr3_2:90512783-90512802 | None:intergenic | 55.0% | |
| TCAGAGGGTGGAGAAACCCA+AGG | - | chr3_2:90512935-90512954 | Msa0436750:CDS | 55.0% | |
| GAGCTGGATACATCCTCCAC+AGG | - | chr3_2:90513808-90513827 | Msa0436750:intron | 55.0% | |
| CCGGACACAGCAGTAACACA+TGG | + | chr3_2:90514065-90514084 | None:intergenic | 55.0% | |
| ACTTGATCAGCCGGAAGAGG+AGG | + | chr3_2:90514446-90514465 | None:intergenic | 55.0% | |
| GATACACAGAAGGCTCGCCA+AGG | - | chr3_2:90514584-90514603 | Msa0436750:intron | 55.0% | |
| TCTCTCATGCTTACCGCGTG+GGG | + | chr3_2:90515165-90515184 | None:intergenic | 55.0% | |
| CTCTCTCATGCTTACCGCGT+GGG | + | chr3_2:90515166-90515185 | None:intergenic | 55.0% | |
| TTACTTGCAGGCCAAGGTCG+TGG | - | chr3_2:90515508-90515527 | Msa0436750:CDS | 55.0% | |
| ! | CGGCCATGTTCCTGCAGTTT+TGG | - | chr3_2:90515654-90515673 | Msa0436750:intron | 55.0% |
| ATGGAAGAGAGCGAGGGGCT+GGG | + | chr3_2:90512776-90512795 | None:intergenic | 60.0% | |
| CTCGCCAAGGATGCGAGGAA+GGG | - | chr3_2:90514597-90514616 | Msa0436750:intron | 60.0% | |
| TCGCCAAGGATGCGAGGAAG+GGG | - | chr3_2:90514598-90514617 | Msa0436750:intron | 60.0% | |
| !! | GATGGTGGACGTGGCTATGG+TGG | - | chr3_2:90515032-90515051 | Msa0436750:CDS | 60.0% |
| GACGTGGCTATGGTGGCAGA+GGG | - | chr3_2:90515039-90515058 | Msa0436750:CDS | 60.0% | |
| ! | GGAAAGCACGACCCCATGCA+CGG | + | chr3_2:90515070-90515089 | None:intergenic | 60.0% |
| GTGCATGGGGTCGTGCTTTC+CGG | - | chr3_2:90515069-90515088 | Msa0436750:CDS | 60.0% | |
| TGCATGGGGTCGTGCTTTCC+GGG | - | chr3_2:90515070-90515089 | Msa0436750:CDS | 60.0% | |
| GCTCTCTCATGCTTACCGCG+TGG | + | chr3_2:90515167-90515186 | None:intergenic | 60.0% | |
| TTGCAGGCCAAGGTCGTGGA+AGG | - | chr3_2:90515512-90515531 | Msa0436750:CDS | 60.0% | |
| TGCAGGCCAAGGTCGTGGAA+GGG | - | chr3_2:90515513-90515532 | Msa0436750:CDS | 60.0% | |
| CTCTTCCCCTTCCACGACCT+TGG | + | chr3_2:90515522-90515541 | None:intergenic | 60.0% | |
| CAAGGTCGTGGAAGGGGAAG+AGG | - | chr3_2:90515520-90515539 | Msa0436750:CDS | 60.0% | |
| CAGCATCACGACCACGTCCA+CGG | + | chr3_2:90515546-90515565 | None:intergenic | 60.0% | |
| GATGGAAGAGAGCGAGGGGC+TGG | + | chr3_2:90512777-90512796 | None:intergenic | 65.0% | |
| GAAGGCTCGCCAAGGATGCG+AGG | - | chr3_2:90514592-90514611 | Msa0436750:intron | 65.0% | |
| GCTCGCCAAGGATGCGAGGA+AGG | - | chr3_2:90514596-90514615 | Msa0436750:intron | 65.0% | |
| CGCCAAGGATGCGAGGAAGG+GGG | - | chr3_2:90514599-90514618 | Msa0436750:intron | 65.0% | |
| GGACGTGGCTATGGTGGCAG+AGG | - | chr3_2:90515038-90515057 | Msa0436750:CDS | 65.0% | |
| GCATGGGGTCGTGCTTTCCG+GGG | - | chr3_2:90515071-90515090 | Msa0436750:CDS | 65.0% | |
| CATAGCCACGTCCTCGTCCC+CGG | + | chr3_2:90515091-90515110 | None:intergenic | 65.0% | |
| ACGTGGCTATGGTGCCCAGC+CGG | - | chr3_2:90515100-90515119 | Msa0436750:intron | 65.0% | |
| GCTATGGTGCCCAGCCGGTT+GGG | - | chr3_2:90515105-90515124 | Msa0436750:intron | 65.0% | |
| TCATGCTTACCGCGTGGGGC+AGG | + | chr3_2:90515161-90515180 | None:intergenic | 65.0% | |
| GCAGGCCAAGGTCGTGGAAG+GGG | - | chr3_2:90515514-90515533 | Msa0436750:CDS | 65.0% | |
| CGTGGACGTGGTCGTGATGC+TGG | - | chr3_2:90515544-90515563 | Msa0436750:CDS | 65.0% | |
| CGAGGGGCTGGGTGGCTATG+GGG | + | chr3_2:90512765-90512784 | None:intergenic | 70.0% | |
| GCGAGGGGCTGGGTGGCTAT+GGG | + | chr3_2:90512766-90512785 | None:intergenic | 70.0% | |
| AGCGAGGGGCTGGGTGGCTA+TGG | + | chr3_2:90512767-90512786 | None:intergenic | 70.0% | |
| GAAGAGAGCGAGGGGCTGGG+TGG | + | chr3_2:90512773-90512792 | None:intergenic | 70.0% | |
| CGCCCCCTTCCTCGCATCCT+TGG | + | chr3_2:90514604-90514623 | None:intergenic | 70.0% | |
| AGGATGCGAGGAAGGGGGCG+TGG | - | chr3_2:90514604-90514623 | Msa0436750:intron | 70.0% | |
| ! | AAGGGGGCGTGGCCGTGGAA+GGG | - | chr3_2:90514615-90514634 | Msa0436750:intron | 70.0% |
| CTCTGCCCCTGCCCCTTCCA+CGG | + | chr3_2:90514630-90514649 | None:intergenic | 70.0% | |
| AGGGGCAGGGGCAGAGGTAG+AGG | - | chr3_2:90514634-90514653 | Msa0436750:intron | 70.0% | |
| GGCTATGGTGGCAGAGGGCG+TGG | - | chr3_2:90515044-90515063 | Msa0436750:CDS | 70.0% | |
| ! | CAGAGGGCGTGGCCGTGCAT+GGG | - | chr3_2:90515055-90515074 | Msa0436750:CDS | 70.0% |
| ! | AGAGGGCGTGGCCGTGCATG+GGG | - | chr3_2:90515056-90515075 | Msa0436750:CDS | 70.0% |
| GGTCGTGCTTTCCGGGGACG+AGG | - | chr3_2:90515077-90515096 | Msa0436750:intron | 70.0% | |
| GCTTTCCGGGGACGAGGACG+TGG | - | chr3_2:90515083-90515102 | Msa0436750:intron | 70.0% | |
| CGGGGACGAGGACGTGGCTA+TGG | - | chr3_2:90515089-90515108 | Msa0436750:intron | 70.0% | |
| GGCTATGGTGCCCAGCCGGT+TGG | - | chr3_2:90515104-90515123 | Msa0436750:intron | 70.0% | |
| CTTACCGCGTGGGGCAGGTG+GGG | + | chr3_2:90515156-90515175 | None:intergenic | 70.0% | |
| GCTTACCGCGTGGGGCAGGT+GGG | + | chr3_2:90515157-90515176 | None:intergenic | 70.0% | |
| TGCTTACCGCGTGGGGCAGG+TGG | + | chr3_2:90515158-90515177 | None:intergenic | 70.0% | |
| CGTGGAAGGGGAAGAGGCCG+TGG | - | chr3_2:90515526-90515545 | Msa0436750:CDS | 70.0% | |
| AGGGGAAGAGGCCGTGGACG+TGG | - | chr3_2:90515532-90515551 | Msa0436750:CDS | 70.0% | |
| ! | GAAGGGGGCGTGGCCGTGGA+AGG | - | chr3_2:90514614-90514633 | Msa0436750:intron | 75.0% |
| ! | AGGGGGCGTGGCCGTGGAAG+GGG | - | chr3_2:90514616-90514635 | Msa0436750:intron | 75.0% |
| GCGTGGCCGTGGAAGGGGCA+GGG | - | chr3_2:90514621-90514640 | Msa0436750:intron | 75.0% | |
| CGTGGCCGTGGAAGGGGCAG+GGG | - | chr3_2:90514622-90514641 | Msa0436750:intron | 75.0% | |
| CGTGGAAGGGGCAGGGGCAG+AGG | - | chr3_2:90514628-90514647 | Msa0436750:intron | 75.0% | |
| ! | GCAGAGGGCGTGGCCGTGCA+TGG | - | chr3_2:90515054-90515073 | Msa0436750:CDS | 75.0% |
| GATGCCCCACCTGCCCCACG+CGG | - | chr3_2:90515149-90515168 | Msa0436750:intron | 75.0% | |
| !! | CGAGGAAGGGGGCGTGGCCG+TGG | - | chr3_2:90514610-90514629 | Msa0436750:intron | 80.0% |
| ! | GGCGTGGCCGTGGAAGGGGC+AGG | - | chr3_2:90514620-90514639 | Msa0436750:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 90512636 | 90515862 | 90512636 | ID=Msa0436750;Name=Msa0436750 |
| chr3_2 | mRNA | 90512636 | 90515862 | 90512636 | ID=Msa0436750-mRNA-1;Parent=Msa0436750;Name=Msa0436750-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|1|1|1|0.87|0.88|9|277|306 |
| chr3_2 | exon | 90512636 | 90512980 | 90512636 | ID=Msa0436750-mRNA-1:exon:26937;Parent=Msa0436750-mRNA-1 |
| chr3_2 | exon | 90513328 | 90513504 | 90513328 | ID=Msa0436750-mRNA-1:exon:26936;Parent=Msa0436750-mRNA-1 |
| chr3_2 | exon | 90513843 | 90513905 | 90513843 | ID=Msa0436750-mRNA-1:exon:26935;Parent=Msa0436750-mRNA-1 |
| chr3_2 | exon | 90514001 | 90514062 | 90514001 | ID=Msa0436750-mRNA-1:exon:26934;Parent=Msa0436750-mRNA-1 |
| chr3_2 | exon | 90514668 | 90514742 | 90514668 | ID=Msa0436750-mRNA-1:exon:26933;Parent=Msa0436750-mRNA-1 |
| chr3_2 | exon | 90514833 | 90514921 | 90514833 | ID=Msa0436750-mRNA-1:exon:26932;Parent=Msa0436750-mRNA-1 |
| chr3_2 | exon | 90515015 | 90515095 | 90515015 | ID=Msa0436750-mRNA-1:exon:26931;Parent=Msa0436750-mRNA-1 |
| chr3_2 | exon | 90515452 | 90515574 | 90515452 | ID=Msa0436750-mRNA-1:exon:26930;Parent=Msa0436750-mRNA-1 |
| chr3_2 | exon | 90515680 | 90515862 | 90515680 | ID=Msa0436750-mRNA-1:exon:26929;Parent=Msa0436750-mRNA-1 |
| chr3_2 | CDS | 90515680 | 90515862 | 90515680 | ID=Msa0436750-mRNA-1:cds;Parent=Msa0436750-mRNA-1 |
| chr3_2 | CDS | 90515452 | 90515574 | 90515452 | ID=Msa0436750-mRNA-1:cds;Parent=Msa0436750-mRNA-1 |
| chr3_2 | CDS | 90515015 | 90515095 | 90515015 | ID=Msa0436750-mRNA-1:cds;Parent=Msa0436750-mRNA-1 |
| chr3_2 | CDS | 90514833 | 90514921 | 90514833 | ID=Msa0436750-mRNA-1:cds;Parent=Msa0436750-mRNA-1 |
| chr3_2 | CDS | 90514668 | 90514742 | 90514668 | ID=Msa0436750-mRNA-1:cds;Parent=Msa0436750-mRNA-1 |
| chr3_2 | CDS | 90514001 | 90514062 | 90514001 | ID=Msa0436750-mRNA-1:cds;Parent=Msa0436750-mRNA-1 |
| chr3_2 | CDS | 90513843 | 90513905 | 90513843 | ID=Msa0436750-mRNA-1:cds;Parent=Msa0436750-mRNA-1 |
| chr3_2 | CDS | 90513328 | 90513504 | 90513328 | ID=Msa0436750-mRNA-1:cds;Parent=Msa0436750-mRNA-1 |
| chr3_2 | CDS | 90512913 | 90512980 | 90512913 | ID=Msa0436750-mRNA-1:cds;Parent=Msa0436750-mRNA-1 |
| chr3_2 | three_prime_UTR | 90512636 | 90512912 | 90512636 | ID=Msa0436750-mRNA-1:three_prime_utr;Parent=Msa0436750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
