AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1311400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1311400 MtrunA17_Chr8g0339111 99.061 213 0 1 316 526 3 215 8.22e-149 425
Msa1311400 MtrunA17_Chr8g0339111 87.151 179 19 2 129 305 27 203 3.22e-98 296
Msa1311400 MtrunA17_Chr8g0339121 95.767 189 6 1 129 315 6 194 6.85e-127 369
Msa1311400 MtrunA17_Chr8g0339121 81.152 191 32 2 339 525 5 195 2.49e-102 306
Msa1311400 MtrunA17_Chr7g0234781 90.640 203 15 2 316 514 3 205 2.57e-116 342
Msa1311400 MtrunA17_Chr7g0234781 88.268 179 19 1 129 305 27 205 3.25e-104 311
Msa1311400 MtrunA17_Chr4g0006811 86.559 186 23 1 129 312 6 191 2.01e-112 332
Msa1311400 MtrunA17_Chr4g0006811 85.492 193 23 3 339 526 5 197 1.33e-108 322
Msa1311400 MtrunA17_Chr4g0006791 73.494 83 21 1 445 526 12 94 4.13e-33 121
Msa1311400 MtrunA17_Chr4g0006791 72.727 77 20 1 236 311 12 88 5.43e-31 115
Msa1311400 MtrunA17_Chr8g0339141 96.774 62 2 0 1 62 1 62 2.11e-32 130
Msa1311400 MtrunA17_Chr8g0377771 58.333 60 15 1 13 62 1 60 3.25e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1311400 AT5G59240.1 84.577 201 22 2 316 514 3 196 3.31e-116 342
Msa1311400 AT5G59240.1 75.661 189 35 2 119 305 17 196 1.96e-93 284
Msa1311400 AT5G20290.1 79.327 208 34 2 316 514 3 210 1.72e-98 297
Msa1311400 AT5G20290.1 76.087 184 37 2 129 305 27 210 1.50e-86 266

Find 134 sgRNAs with CRISPR-Local

Find 896 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCAAGCTGGCGCTCTTTC+TGG 0.081596 8_4:+8170641 None:intergenic
CACCCTTGCCCTTCTTCTTC+TGG 0.129125 8_4:+8170406 None:intergenic
GTTCCAGCTGCAACATTCTT+AGG 0.141300 8_4:+8178614 None:intergenic
CAACACTATGGTGTTGAAAT+TGG 0.226186 8_4:-8175601 Msa1311400:CDS
AATAACCAATAACAGTTTAA+AGG 0.261955 8_4:+8170232 None:intergenic
CAACACTATGGTGTTGATAT+TGG 0.287835 8_4:-8171244 Msa1311400:CDS
AAAGAAAATTGCTGCCAAAA+AGG 0.311588 8_4:-8175572 Msa1311400:CDS
TAACCATGTGCTGAGGAAAT+TGG 0.317141 8_4:-8175131 Msa1311400:CDS
CTTGATAGCTTGGTGTTAGC+TGG 0.334031 8_4:+8175850 None:intergenic
TCCTCACCGACCTTGAGAAT+TGG 0.345436 8_4:+8184970 None:intergenic
TGGATTATGCAGCTACGTTT+TGG 0.358703 8_4:-8174916 Msa1311400:intron
AAAGTCGAAATCGTCGTTCA+TGG 0.362909 8_4:+8185011 None:intergenic
CCAGAGATAGGAGGACAAAA+AGG 0.366469 8_4:-8177069 Msa1311400:intron
CTCGACCTGGTCAATGTGGC+AGG 0.375397 8_4:-8175027 Msa1311400:CDS
TCATAGTACTGACCACTATC+AGG 0.387866 8_4:-8170145 Msa1311400:three_prime_UTR
AGTTCGCACAAGCTCATTGT+TGG 0.390463 8_4:+8175687 None:intergenic
AGTTCGCACCAACTCATTGT+TGG 0.421739 8_4:+8171330 None:intergenic
GAAAGTATTCAGAAATTAAA+CGG 0.431180 8_4:+8170166 None:intergenic
GGTCAATGTGGCAGGGCTGA+TGG 0.436487 8_4:-8175019 Msa1311400:CDS
ACTTCCCCATGAGAAGTTAC+CGG 0.438688 8_4:+8171402 None:intergenic
AAGAATGTTGCAGCTGGAAC+TGG 0.443635 8_4:-8178611 Msa1311400:CDS
ATACGCAGCTACATTCTTGA+AGG 0.447637 8_4:-8170459 Msa1311400:intron
GTGAGGAGGATTCGTGTTAG+AGG 0.449573 8_4:-8171460 Msa1311400:CDS
TCAATCATTTCCAGGTGCAC+AGG 0.451922 8_4:-8178713 Msa1311400:intron
GTGAGGAGTATTCGTGTTAG+AGG 0.453283 8_4:-8175817 Msa1311400:CDS
TCTCAAGGTCGGTGAGGAAA+AGG 0.457519 8_4:-8184965 Msa1311400:CDS
TGTAAACCACATCGAGCAAA+CGG 0.457912 8_4:+8171359 None:intergenic
GAAATGTAGAGCTTTGAGAT+TGG 0.458837 8_4:-8175785 Msa1311400:CDS
CAATGGTACCTTCAACACTA+TGG 0.459815 8_4:-8171256 Msa1311400:CDS
GGTCAATGCGGCAGAGCTGA+TGG 0.461383 8_4:-8170559 Msa1311400:CDS
ATGCACAAGAGACGTGAAAC+TGG 0.464049 8_4:-8172389 Msa1311400:CDS
GGCTTGCAACTGGCGGCAAA+AGG 0.466293 8_4:-8177048 Msa1311400:CDS
GCCCACATTGAAGAGCAGTT+TGG 0.466515 8_4:-8175079 Msa1311400:CDS
AAGAAGAAGCTTCTCAAAGA+AGG 0.467998 8_4:-8184922 Msa1311400:CDS
TGAACTTCGTCGCCAACATC+AGG 0.468183 8_4:+8184883 None:intergenic
AGAGCTTTGAGATTGGATAC+TGG 0.469624 8_4:-8175778 Msa1311400:CDS
TTTCAACACCATAGTGTTGA+AGG 0.469659 8_4:+8175605 None:intergenic
AACATCTCTTTGCTCGGTAC+TGG 0.471227 8_4:+8170327 None:intergenic
ATTGAAGAGCAGTTTGGTGG+TGG 0.472462 8_4:-8175073 Msa1311400:CDS
TGTAAACCACATTTAGCAAA+CGG 0.475109 8_4:+8175716 None:intergenic
TTCCAGCTGCAACATTCTTA+GGG 0.475324 8_4:+8178615 None:intergenic
CAGTGGTACCTTCAACACTA+TGG 0.479335 8_4:-8175613 Msa1311400:CDS
GTAAACCACATTTAGCAAAC+GGG 0.484419 8_4:+8175717 None:intergenic
CCTCAATGTGGGCATCAAGC+TGG 0.484443 8_4:+8170629 None:intergenic
GTCAATGTGGCAGGGCTGAT+GGG 0.486542 8_4:-8175018 Msa1311400:intron
TTCTCAAAGAAGGTGAAGGT+TGG 0.486591 8_4:-8184912 Msa1311400:CDS
ATAGCTTGGTGTTAGCTGGC+TGG 0.487106 8_4:+8175854 None:intergenic
TTGAAGGTACCATTGCTTGA+AGG 0.488302 8_4:+8171264 None:intergenic
GCATGCATTTCTTCTCGACC+TGG 0.488891 8_4:-8170580 Msa1311400:CDS
TATCAACACCATAGTGTTGA+AGG 0.489500 8_4:+8171248 None:intergenic
GTCGGTGAGGAAAAGGAAAT+CGG 0.494085 8_4:-8184958 Msa1311400:CDS
GAAGTGGAGAGCTTTGAGAT+TGG 0.494282 8_4:-8171428 Msa1311400:CDS
TCTCAAAGAAGGTGAAGGTT+GGG 0.495972 8_4:-8184911 Msa1311400:CDS
TGTGCTTCAGCTGATGCTGT+TGG 0.499070 8_4:-8170303 Msa1311400:three_prime_UTR
CTTCAATGTGGGCATCGAGC+TGG 0.501663 8_4:+8175089 None:intergenic
GAAGAAACTGCAGAGGAAGA+AGG 0.506285 8_4:-8174868 Msa1311400:CDS
TCAGCTCTGCCGCATTGACC+AGG 0.506358 8_4:+8170562 None:intergenic
ACATTCTTAGGGCATGCGCA+TGG 0.506365 8_4:+8178626 None:intergenic
TGAAGGTACCACTGCTTGAA+TGG 0.509010 8_4:+8175622 None:intergenic
CAGCTACATTCTTGAAGGTA+AGG 0.509801 8_4:-8170454 Msa1311400:CDS
ATTGAGGAGCAGTTTGGTGG+TGG 0.510507 8_4:-8170613 Msa1311400:CDS
TGCCCTAAGAATGTTGCAGC+TGG 0.512824 8_4:-8178617 Msa1311400:CDS
TGAAGGTACCATTGCTTGAA+GGG 0.514607 8_4:+8171265 None:intergenic
GCCCACATTGAGGAGCAGTT+TGG 0.515176 8_4:-8170619 Msa1311400:CDS
TGGATACCGGTAACTTCTCA+TGG 0.515609 8_4:-8171408 Msa1311400:CDS
CAAAACCCGTTTGCTCGATG+TGG 0.521241 8_4:-8171365 Msa1311400:CDS
CAATGCTTCCAACAATGAGT+TGG 0.525534 8_4:-8171338 Msa1311400:CDS
GATGTTGGCGACGAAGTTCA+CGG 0.526328 8_4:-8184880 Msa1311400:intron
CACATTGAGGAGCAGTTTGG+TGG 0.527285 8_4:-8170616 Msa1311400:CDS
GAAGAAACTCCAGAAGAAGA+AGG 0.530638 8_4:-8170415 Msa1311400:CDS
CATTCTTAGGGCATGCGCAT+GGG 0.536073 8_4:+8178627 None:intergenic
GCATGCATTTCTTCTCGACC+TGG 0.542463 8_4:-8175040 Msa1311400:CDS
GTAAACCACATCGAGCAAAC+GGG 0.544170 8_4:+8171360 None:intergenic
AAGAAACTGCAGAGGAAGAA+GGG 0.547896 8_4:-8174867 Msa1311400:CDS
CCAGCTTGATGCCCACATTG+AGG 0.548092 8_4:-8170629 Msa1311400:CDS
GAAAACCCGTTTGCTAAATG+TGG 0.549447 8_4:-8175722 Msa1311400:CDS
TCAGCCCTGCCACATTGACC+AGG 0.549946 8_4:+8175022 None:intergenic
AGGAGGATTCGTGTTAGAGG+TGG 0.553665 8_4:-8171457 Msa1311400:CDS
CTTGAGAATTGGATTATCGC+CGG 0.557653 8_4:+8184981 None:intergenic
TCTGCAATTACAGGAGGCTG+AGG 0.558767 8_4:-8170719 Msa1311400:intron
CAATCATTTCCAGGTGCACA+GGG 0.563511 8_4:-8178712 Msa1311400:intron
GCACAAAACATCTCTTTGCT+CGG 0.567446 8_4:+8170321 None:intergenic
TGGATACTGGAAACATCTCA+TGG 0.567538 8_4:-8175765 Msa1311400:CDS
ATGCTGCTCCCTTCAAGCAA+TGG 0.568267 8_4:-8171273 Msa1311400:CDS
TTGAAGAGCAGTTTGGTGGT+GGG 0.568882 8_4:-8175072 Msa1311400:CDS
CTCCAGAAGAAGAAGGGCAA+GGG 0.571076 8_4:-8170408 Msa1311400:CDS
CACATTGAAGAGCAGTTTGG+TGG 0.571188 8_4:-8175076 Msa1311400:CDS
ACCAAACTGCTCTTCAATGT+GGG 0.572191 8_4:+8175078 None:intergenic
GGATACCGGTAACTTCTCAT+GGG 0.577966 8_4:-8171407 Msa1311400:CDS
GTCAATGCGGCAGAGCTGAT+GGG 0.580186 8_4:-8170558 Msa1311400:intron
GAAAAGGAAATCGGAAAGCA+AGG 0.580701 8_4:-8184949 Msa1311400:CDS
GATTTCGACTTTGACGCCGC+CGG 0.582533 8_4:-8185000 Msa1311400:CDS
TCGACCTGGTCAATGTGGCA+GGG 0.582666 8_4:-8175026 Msa1311400:CDS
TCTCCAATTTCCTCAGCACA+TGG 0.587716 8_4:+8175128 None:intergenic
CACCAAACTGCTCTTCAATG+TGG 0.590048 8_4:+8175077 None:intergenic
GGATACTGGAAACATCTCAT+GGG 0.590726 8_4:-8175764 Msa1311400:CDS
TCGTTCATGGAATCAACCGC+AGG 0.593724 8_4:+8185024 None:intergenic
GGGGAAGTGAAGCTGTCACT+CGG 0.595119 8_4:-8175744 Msa1311400:CDS
TCACACAACATGCTCTTGCG+TGG 0.595276 8_4:-8178666 Msa1311400:CDS
AAGAAACTCCAGAAGAAGAA+GGG 0.596297 8_4:-8170414 Msa1311400:CDS
ACCAAACTGCTCCTCAATGT+GGG 0.596753 8_4:+8170618 None:intergenic
GTTTCATTTAGGTATGAGCT+CGG 0.597421 8_4:-8175880 Msa1311400:intron
AAATGTTAGCAAGAAAGAGG+AGG 0.606920 8_4:-8171209 Msa1311400:intron
CGGCGATAATCCAATTCTCA+AGG 0.607632 8_4:-8184980 Msa1311400:CDS
CTGGTGGCAAGAAGAAAGCA+TGG 0.611110 8_4:-8172370 Msa1311400:CDS
AAGCTTCTCAAAGAAGGTGA+AGG 0.613170 8_4:-8184916 Msa1311400:CDS
GTTTCATCTAGGTACGAGCT+CGG 0.613407 8_4:-8171523 Msa1311400:intron
ACTCCAGAAGAAGAAGGGCA+AGG 0.618644 8_4:-8170409 Msa1311400:CDS
TCTTCTCGACCTGGTCAATG+TGG 0.620321 8_4:-8175031 Msa1311400:CDS
TGAAAGTGAGTGCCTGATAG+TGG 0.621807 8_4:+8170133 None:intergenic
CACCAAACTGCTCCTCAATG+TGG 0.622269 8_4:+8170617 None:intergenic
TCCAATTCTCAAGGTCGGTG+AGG 0.631768 8_4:-8184971 Msa1311400:CDS
GGTTGGGATACTCCTGATGT+TGG 0.634182 8_4:-8184895 Msa1311400:CDS
GAAAGTACATGTGCAAGCTG+AGG 0.636659 8_4:+8178577 None:intergenic
AGAGCTTTGAGATTGGATAC+CGG 0.636809 8_4:-8171421 Msa1311400:CDS
ATGCTGCTCCATTCAAGCAG+TGG 0.639929 8_4:-8175630 Msa1311400:CDS
AGGAGTATTCGTGTTAGAGG+TGG 0.646659 8_4:-8175814 Msa1311400:CDS
TTAGAGGTGGAAATGTGAAG+TGG 0.659708 8_4:-8171444 Msa1311400:CDS
TCTACATGAAGAAACTGCAG+AGG 0.659966 8_4:-8174875 Msa1311400:CDS
TCTTCTCGACCTGGTCAATG+CGG 0.660301 8_4:-8170571 Msa1311400:CDS
ATGGAAACAATACAATCAAG+CGG 0.663363 8_4:+8170383 None:intergenic
GATACTGGAAACATCTCATG+GGG 0.671396 8_4:-8175763 Msa1311400:CDS
CACAAGAGACGTGAAACTGG+TGG 0.674239 8_4:-8172386 Msa1311400:CDS
TGTGTGATCAATTTCACTTG+AGG 0.674610 8_4:+8178682 None:intergenic
CGAAGATTTCGATATTCCTG+CGG 0.676895 8_4:-8185040 Msa1311400:CDS
AAAAGAGTAACCATGTGCTG+AGG 0.687141 8_4:-8175138 Msa1311400:CDS
GATACCGGTAACTTCTCATG+GGG 0.694944 8_4:-8171406 Msa1311400:CDS
GATAATCCAATTCTCAAGGT+CGG 0.697498 8_4:-8184976 Msa1311400:CDS
GAGAATTGGATTATCGCCGG+CGG 0.706064 8_4:+8184984 None:intergenic
CAAGCAACAAGACAGTGAGG+AGG 0.706786 8_4:-8171474 Msa1311400:CDS
TGCTCTTGCGTGGAGCACTG+TGG 0.720000 8_4:-8178656 Msa1311400:CDS
TATCAAGCAACAAGACAGTG+AGG 0.731948 8_4:-8171477 Msa1311400:CDS
TATCAAGCAACAAAACAGTG+AGG 0.754889 8_4:-8175834 Msa1311400:CDS
GTGGCAAGAAGAAAGCATGG+AGG 0.807428 8_4:-8172367 Msa1311400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAAAATTTTAAAAATAA+GGG + chr8_4:8177419-8177438 None:intergenic 0.0%
!!! AATTTAAAATTTTAAAAATA+AGG + chr8_4:8177420-8177439 None:intergenic 0.0%
!!! TTGATTTTTGTTATTTTAAT+TGG - chr8_4:8170496-8170515 Msa1311400:intron 10.0%
!! TTTCTATATAATAATGTAAT+AGG - chr8_4:8170627-8170646 Msa1311400:CDS 10.0%
!! TTCTATATAATAATGTAATA+GGG - chr8_4:8170628-8170647 Msa1311400:CDS 10.0%
!!! TTAAATGTTTTCATAAAATT+GGG - chr8_4:8170658-8170677 Msa1311400:CDS 10.0%
!!! AATGTAATTTTATTATTGAA+AGG - chr8_4:8172640-8172659 Msa1311400:intron 10.0%
!!! TAAATAAGTTACTTTATAAA+GGG - chr8_4:8173791-8173810 Msa1311400:intron 10.0%
!! ATATTCTTTATCAAATTAAA+AGG + chr8_4:8175235-8175254 None:intergenic 10.0%
!! TAATTTGATAAAGAATATTA+TGG - chr8_4:8175237-8175256 Msa1311400:intron 10.0%
!! TTTGTTTCATAATATTAAAT+AGG - chr8_4:8175504-8175523 Msa1311400:intron 10.0%
!! TTGTTTCATAATATTAAATA+GGG - chr8_4:8175505-8175524 Msa1311400:intron 10.0%
!! AAAAAAAAAAAAATAATGTC+AGG + chr8_4:8175712-8175731 None:intergenic 10.0%
!! TTTATTTATTGAGAATTTAA+GGG - chr8_4:8176211-8176230 Msa1311400:intron 10.0%
!!! CTATTTTATTAGTTTATATT+TGG - chr8_4:8176641-8176660 Msa1311400:intron 10.0%
!!! GTATGAATATTAAAATATTT+TGG - chr8_4:8177057-8177076 Msa1311400:CDS 10.0%
!!! TTGTAAAATTTGAAAATTTT+AGG - chr8_4:8177134-8177153 Msa1311400:intron 10.0%
!!! TGTAAAATTTGAAAATTTTA+GGG - chr8_4:8177135-8177154 Msa1311400:intron 10.0%
!!! TTTTAAAAAAAAAAAAACAG+GGG - chr8_4:8177171-8177190 Msa1311400:intron 10.0%
!! AAAATAAAGAAAAAATACAA+GGG + chr8_4:8178665-8178684 None:intergenic 10.0%
!! AAAAACAATGATTATAAATT+GGG - chr8_4:8178797-8178816 Msa1311400:intron 10.0%
!! AAAAACAATGATTATAAATT+GGG - chr8_4:8178797-8178816 Msa1311400:intron 10.0%
!! CTTAACAAAATTAATAAATA+AGG + chr8_4:8180654-8180673 None:intergenic 10.0%
!! CTTAACAAAATTAATAAATA+AGG + chr8_4:8180654-8180673 None:intergenic 10.0%
!! CTTAACAAAATTAATAAATA+AGG + chr8_4:8180654-8180673 None:intergenic 10.0%
!! AATAAAATGCAATATATAAT+TGG + chr8_4:8181404-8181423 None:intergenic 10.0%
!!! TTTTCTATAATAAAATTTCT+CGG - chr8_4:8181595-8181614 Msa1311400:intron 10.0%
!!! TTTTTTTATAAAAATATGCA+AGG + chr8_4:8182179-8182198 None:intergenic 10.0%
!! TCAAAATTAATCTATAAAAA+TGG + chr8_4:8182263-8182282 None:intergenic 10.0%
!!! ATATTTTCTGATAAATAATT+AGG - chr8_4:8183427-8183446 Msa1311400:intron 10.0%
!!! TTTTTTTAACTAAGATATTT+TGG - chr8_4:8183596-8183615 Msa1311400:intron 10.0%
!! AAATCAAACATAGAAATTAA+CGG + chr8_4:8170524-8170543 None:intergenic 15.0%
!!! TTAATTTCTATGTTTGATTT+AGG - chr8_4:8170524-8170543 Msa1311400:intron 15.0%
!!! GTTAAATGTTTTCATAAAAT+TGG - chr8_4:8170657-8170676 Msa1311400:CDS 15.0%
!!! TCAAAAGAAATTGTATATTT+TGG - chr8_4:8171057-8171076 Msa1311400:intron 15.0%
!! ATTATTTAAGAAGATAGTTA+AGG - chr8_4:8171410-8171429 Msa1311400:CDS 15.0%
!! AGAAATAATCTATAAATAGA+AGG + chr8_4:8172728-8172747 None:intergenic 15.0%
!!! TGTAAAAATCAGTTATTTTT+AGG + chr8_4:8173622-8173641 None:intergenic 15.0%
!!! AAAAATAACTGATTTTTACA+TGG - chr8_4:8173622-8173641 Msa1311400:intron 15.0%
!!! CTAAATAAGTTACTTTATAA+AGG - chr8_4:8173790-8173809 Msa1311400:intron 15.0%
!!! AAATAAGTTACTTTATAAAG+GGG - chr8_4:8173792-8173811 Msa1311400:intron 15.0%
!!! TGATTTTAATGAATTTTTCA+TGG + chr8_4:8174212-8174231 None:intergenic 15.0%
!! AAATGTAAAAACTACTAATA+GGG + chr8_4:8175090-8175109 None:intergenic 15.0%
!! AAAATGTAAAAACTACTAAT+AGG + chr8_4:8175091-8175110 None:intergenic 15.0%
!! ATGTATTATTGAAATTAGAT+GGG + chr8_4:8175578-8175597 None:intergenic 15.0%
!! AATGTATTATTGAAATTAGA+TGG + chr8_4:8175579-8175598 None:intergenic 15.0%
!!! CTCATTTTATTTTTAAATTC+AGG - chr8_4:8175908-8175927 Msa1311400:intron 15.0%
!! AACCAAAAATAAGATAAAAT+TGG - chr8_4:8176041-8176060 Msa1311400:intron 15.0%
!! GTTTATTTATTGAGAATTTA+AGG - chr8_4:8176210-8176229 Msa1311400:intron 15.0%
!! AAAGTGAATCATATTTAATA+GGG + chr8_4:8176314-8176333 None:intergenic 15.0%
!! TAAAGTGAATCATATTTAAT+AGG + chr8_4:8176315-8176334 None:intergenic 15.0%
!! ATTTAAATTTCAAAAAGTTG+TGG - chr8_4:8177086-8177105 Msa1311400:intron 15.0%
!! TTTAAATTTCAAAAAGTTGT+GGG - chr8_4:8177087-8177106 Msa1311400:intron 15.0%
!!! TTTTCCTTAAAAAAAAAACT+TGG - chr8_4:8177505-8177524 Msa1311400:intron 15.0%
!! CCTAACAAAATTAATAAATA+AGG + chr8_4:8177753-8177772 None:intergenic 15.0%
!!! CCTTATTTATTAATTTTGTT+AGG - chr8_4:8177750-8177769 Msa1311400:intron 15.0%
!!! TATTATTGTTATTATGAATC+AGG - chr8_4:8178047-8178066 Msa1311400:intron 15.0%
!! CAAAATAAAGAAAAAATACA+AGG + chr8_4:8178666-8178685 None:intergenic 15.0%
!! GAAAAACAATGATTATAAAT+TGG - chr8_4:8178796-8178815 Msa1311400:intron 15.0%
!! GAAAAACAATGATTATAAAT+TGG - chr8_4:8178796-8178815 Msa1311400:intron 15.0%
!! AATAAAATCAACAAAACTTA+AGG + chr8_4:8179747-8179766 None:intergenic 15.0%
!!! AGTTTTGTTGATTTTATTTT+TGG - chr8_4:8179749-8179768 Msa1311400:intron 15.0%
!!! AAGTAATGGAATTATATATT+CGG + chr8_4:8179805-8179824 None:intergenic 15.0%
!!! TGATTTGATGATAATATATA+TGG - chr8_4:8179836-8179855 Msa1311400:intron 15.0%
!! TAATCCAGAAAAAATAAATT+AGG + chr8_4:8180215-8180234 None:intergenic 15.0%
!!! TTTTTTAGATGAAATTTGTT+AGG + chr8_4:8180739-8180758 None:intergenic 15.0%
!! TATTTGCTTCAAAAAAAAAA+AGG + chr8_4:8180796-8180815 None:intergenic 15.0%
!!! TTTTTTAGATGAAATTTGTT+AGG + chr8_4:8180739-8180758 None:intergenic 15.0%
!!! TTAATAAATAAGGATTTGTT+AGG + chr8_4:8181040-8181059 None:intergenic 15.0%
!! TTCATTGTATTATTTATTAC+TGG + chr8_4:8181480-8181499 None:intergenic 15.0%
!! CTTGTATAAATATATAATGA+TGG - chr8_4:8182043-8182062 Msa1311400:intron 15.0%
!! TTTATAAAAAAAATGCACTT+TGG - chr8_4:8182187-8182206 Msa1311400:intron 15.0%
!! AATATCTTCAAAAAAATATG+TGG - chr8_4:8182284-8182303 Msa1311400:intron 15.0%
!! TTGAATATGAAAAAATTCAT+AGG + chr8_4:8182676-8182695 None:intergenic 15.0%
!! TATAAAAAAAAGAGTAAAAC+AGG + chr8_4:8182827-8182846 None:intergenic 15.0%
!!! TTTTGTAATTGTTTTAGATA+TGG - chr8_4:8182909-8182928 Msa1311400:intron 15.0%
!!! TCACTTTTTTTTTTTTAATG+TGG - chr8_4:8182957-8182976 Msa1311400:intron 15.0%
!!! CACTTTTTTTTTTTTAATGT+GGG - chr8_4:8182958-8182977 Msa1311400:intron 15.0%
!! CATTATAATATCAAAGAAAA+CGG + chr8_4:8184011-8184030 None:intergenic 15.0%
!!! GTTATTATGGTTTTTGAATT+TGG - chr8_4:8171082-8171101 Msa1311400:intron 20.0%
!! ATACATTCAAACAATGAATA+AGG + chr8_4:8171172-8171191 None:intergenic 20.0%
!! TACTATATTTCAATTGTCAT+TGG - chr8_4:8171491-8171510 Msa1311400:CDS 20.0%
!!! TTCTTTTCTTTGCATTTTAA+TGG - chr8_4:8172145-8172164 Msa1311400:intron 20.0%
!! TGGTACAAAAACAAATTTAT+GGG + chr8_4:8172351-8172370 None:intergenic 20.0%
!! TTGGTACAAAAACAAATTTA+TGG + chr8_4:8172352-8172371 None:intergenic 20.0%
!!! TTTTATTATTGAAAGGAACT+TGG - chr8_4:8172647-8172666 Msa1311400:intron 20.0%
!! AACAATTTATCAACATATAC+AGG + chr8_4:8172801-8172820 None:intergenic 20.0%
!! CTGGTTAAAGATTTAAATAA+TGG - chr8_4:8172972-8172991 Msa1311400:intron 20.0%
!!! TAAATAATGGAAATTAGCAT+TGG - chr8_4:8172985-8173004 Msa1311400:intron 20.0%
!! AAAATATAGATTGAAGATGA+GGG + chr8_4:8173369-8173388 None:intergenic 20.0%
!! AAAAATATAGATTGAAGATG+AGG + chr8_4:8173370-8173389 None:intergenic 20.0%
!! AAATCAACTATTTGTATCAT+TGG - chr8_4:8173836-8173855 Msa1311400:intron 20.0%
!! TCTACATTTAATAGTTGTAA+TGG - chr8_4:8174251-8174270 Msa1311400:intron 20.0%
!!! AATAGTTGTAATGGATTTTA+AGG - chr8_4:8174260-8174279 Msa1311400:intron 20.0%
!! TATTAGTATTCAGAAACTTT+AGG + chr8_4:8174461-8174480 None:intergenic 20.0%
!!! AATAACAAGAGCTATTTTAA+AGG - chr8_4:8174830-8174849 Msa1311400:intron 20.0%
!!! TCTTTTTGAGGTTTTATAAT+TGG + chr8_4:8174914-8174933 None:intergenic 20.0%
!! GTATTTGGATTAATAATGTT+AGG + chr8_4:8175746-8175765 None:intergenic 20.0%
!!! CGAAGATATAATAATTTTGA+GGG + chr8_4:8175861-8175880 None:intergenic 20.0%
!!! TCGAAGATATAATAATTTTG+AGG + chr8_4:8175862-8175881 None:intergenic 20.0%
!! TAAAATGAGAATGAATATCA+GGG + chr8_4:8175897-8175916 None:intergenic 20.0%
!! ATAAAATGAGAATGAATATC+AGG + chr8_4:8175898-8175917 None:intergenic 20.0%
!!! AGCCAATTTTATCTTATTTT+TGG + chr8_4:8176046-8176065 None:intergenic 20.0%
!!! CATGTTTGTTTGTATTTTAA+CGG - chr8_4:8176152-8176171 Msa1311400:intron 20.0%
!!! TGTCTATTTTAAAATTAGAG+AGG - chr8_4:8176241-8176260 Msa1311400:intron 20.0%
!!! GTCTATTTTAAAATTAGAGA+GGG - chr8_4:8176242-8176261 Msa1311400:intron 20.0%
!! ATAAAATTCATTCTTCAACT+TGG - chr8_4:8176959-8176978 Msa1311400:intron 20.0%
!! TTGACAAAATTTGAAAAATG+AGG - chr8_4:8177198-8177217 Msa1311400:intron 20.0%
!! ATTTAACCTAAATATCTAGT+TGG - chr8_4:8177782-8177801 Msa1311400:intron 20.0%
!! TTTAACCTAAATATCTAGTT+GGG - chr8_4:8177783-8177802 Msa1311400:intron 20.0%
!! TATATAAAAACGAGACATTA+GGG - chr8_4:8177845-8177864 Msa1311400:intron 20.0%
!! ATATATAGAGAAGAGAAAAA+AGG + chr8_4:8178160-8178179 None:intergenic 20.0%
!!! TTTCGTTTTGTTACTAATAT+TGG - chr8_4:8178218-8178237 Msa1311400:intron 20.0%
!! ACAAAATCGTAAAAAACAAA+AGG + chr8_4:8178276-8178295 None:intergenic 20.0%
!! GCTTATTATTAAAAATCGTT+TGG - chr8_4:8178432-8178451 Msa1311400:intron 20.0%
!!! GTTTATTTTGATGTAAGAAT+TGG - chr8_4:8178712-8178731 Msa1311400:intron 20.0%
!!! GAATTGGAAATGTTATTTTA+TGG - chr8_4:8178728-8178747 Msa1311400:intron 20.0%
!!! GGTTAATTTTAGTCAATTTT+TGG - chr8_4:8178749-8178768 Msa1311400:intron 20.0%
!!! TATCATTTTTTTTCTCACAA+AGG - chr8_4:8178997-8179016 Msa1311400:intron 20.0%
!! ATAACAAAAGAAAAATAAGC+AGG + chr8_4:8179627-8179646 None:intergenic 20.0%
!!! TTCTCCTAATTTATTTTTTC+TGG - chr8_4:8180208-8180227 Msa1311400:intron 20.0%
!!! TATGTTTAAGTTGATAATGT+TGG - chr8_4:8180317-8180336 Msa1311400:intron 20.0%
!!! ATGTTTAAGTTGATAATGTT+GGG - chr8_4:8180318-8180337 Msa1311400:intron 20.0%
!! TTATGAATTATGATATGATG+TGG - chr8_4:8180556-8180575 Msa1311400:intron 20.0%
!! TATGAATTATGATATGATGT+GGG - chr8_4:8180557-8180576 Msa1311400:intron 20.0%
!!! CAAATATTTTCTACACTTTT+AGG - chr8_4:8180810-8180829 Msa1311400:intron 20.0%
!! AATATTTGCTTCAAAAAGAA+AGG + chr8_4:8180987-8181006 None:intergenic 20.0%
!!! CAAATATTTTCTACACTTTT+AGG - chr8_4:8180810-8180829 Msa1311400:intron 20.0%
!! ATGCAATATATAATTGGTAA+CGG + chr8_4:8181398-8181417 None:intergenic 20.0%
!!! ATATTAACCTAAAACAGTTT+TGG + chr8_4:8181528-8181547 None:intergenic 20.0%
!! TTAGTAAAGGAAAATATGTT+GGG + chr8_4:8181565-8181584 None:intergenic 20.0%
!! TTTAGTAAAGGAAAATATGT+TGG + chr8_4:8181566-8181585 None:intergenic 20.0%
!! AAATGAGATGAATTTAGTAA+AGG + chr8_4:8181578-8181597 None:intergenic 20.0%
!! TTGTAAATAAGAAAAATGTC+AGG - chr8_4:8181830-8181849 Msa1311400:intron 20.0%
!!! CTCAAAGATTAATGTTTTTT+TGG - chr8_4:8182140-8182159 Msa1311400:intron 20.0%
!!! AAAGATTAATGTTTTTTTGG+TGG - chr8_4:8182143-8182162 Msa1311400:intron 20.0%
!!! ACAGTGTTTTTTTTTTTTTG+AGG - chr8_4:8182343-8182362 Msa1311400:intron 20.0%
!! CTTATATACTCTCAAAATTA+AGG + chr8_4:8182516-8182535 None:intergenic 20.0%
!! TATATAAGAAACAACACATT+AGG - chr8_4:8182528-8182547 Msa1311400:intron 20.0%
!! ATATAAGAAACAACACATTA+GGG - chr8_4:8182529-8182548 Msa1311400:intron 20.0%
!!! TTTTTTTTTTTTAATGTGGG+TGG - chr8_4:8182961-8182980 Msa1311400:intron 20.0%
!! TTTATATATAATGTGGGAAT+TGG - chr8_4:8183000-8183019 Msa1311400:intron 20.0%
!! GTATTATTTAATCCTGAAAT+GGG - chr8_4:8183187-8183206 Msa1311400:intron 20.0%
!! TATTATTTAATCCTGAAATG+GGG - chr8_4:8183188-8183207 Msa1311400:intron 20.0%
!! AAAACATGTATGTTTACTTT+CGG + chr8_4:8183290-8183309 None:intergenic 20.0%
!! TAATTATAGCCAAAAGATAA+GGG + chr8_4:8183337-8183356 None:intergenic 20.0%
!! ATAATTATAGCCAAAAGATA+AGG + chr8_4:8183338-8183357 None:intergenic 20.0%
!!! TAGTTTACATTTCTATTTTC+TGG - chr8_4:8183378-8183397 Msa1311400:intron 20.0%
!!! AGTTTACATTTCTATTTTCT+GGG - chr8_4:8183379-8183398 Msa1311400:intron 20.0%
!! ATAATTAGGTTATAGATCAA+TGG - chr8_4:8183441-8183460 Msa1311400:intron 20.0%
!! TCTCAATGTTATTATTTGTT+GGG - chr8_4:8183556-8183575 Msa1311400:intron 20.0%
!! AAAACCAGTATAAAAATTGT+GGG + chr8_4:8184089-8184108 None:intergenic 20.0%
!! TTGGTTGTTTAAATGTTATT+TGG - chr8_4:8184107-8184126 Msa1311400:intron 20.0%
!!! ATTAATTTAAGCTGTTTTGT+TGG - chr8_4:8184230-8184249 Msa1311400:intron 20.0%
!!! TTTATTCATCTGAAATTTTG+TGG - chr8_4:8184255-8184274 Msa1311400:intron 20.0%
!!! GTTAACATTTTAATATCTCT+TGG - chr8_4:8184863-8184882 Msa1311400:intron 20.0%
!!! ATTTTCCTTTAAACTGTTAT+TGG - chr8_4:8184907-8184926 Msa1311400:CDS 20.0%
!! AATAACCAATAACAGTTTAA+AGG + chr8_4:8184915-8184934 None:intergenic 20.0%
!!! GAAAGTATTCAGAAATTAAA+CGG + chr8_4:8184981-8185000 None:intergenic 20.0%
! TTATGTGTAGTTCATTATAC+TGG - chr8_4:8170374-8170393 Msa1311400:three_prime_UTR 25.0%
!!! TGTTTTGATGAGTTATCATA+TGG - chr8_4:8170684-8170703 Msa1311400:CDS 25.0%
!!! GTATATTTTGGCAGTTATTA+TGG - chr8_4:8171069-8171088 Msa1311400:intron 25.0%
!! TAAGTAATGTGTGATTTTTC+AGG - chr8_4:8171195-8171214 Msa1311400:intron 25.0%
!! AAGTAATGTGTGATTTTTCA+GGG - chr8_4:8171196-8171215 Msa1311400:intron 25.0%
! ATTTAAGAAGATAGTTAAGG+AGG - chr8_4:8171413-8171432 Msa1311400:CDS 25.0%
! TTTAAGAAGATAGTTAAGGA+GGG - chr8_4:8171414-8171433 Msa1311400:CDS 25.0%
!! AGTGTGAACAAATTTTATCA+TGG - chr8_4:8171647-8171666 Msa1311400:intron 25.0%
! TATAACACTTTCCTTTATGA+AGG - chr8_4:8171851-8171870 Msa1311400:intron 25.0%
! TTTCTTTATTGTGTGATAGA+TGG - chr8_4:8171903-8171922 Msa1311400:intron 25.0%
!!! ATTTTAATGGATTTAGTGCA+TGG - chr8_4:8172158-8172177 Msa1311400:intron 25.0%
! AAAAACAAATTTATGGGAGA+GGG + chr8_4:8172345-8172364 None:intergenic 25.0%
! TCATAATACAAGGTTGAATT+AGG + chr8_4:8172536-8172555 None:intergenic 25.0%
! TAATTCAACCTTGTATTATG+AGG - chr8_4:8172535-8172554 Msa1311400:intron 25.0%
! TGAGTTAGTATCATTCATAA+AGG - chr8_4:8172559-8172578 Msa1311400:intron 25.0%
! GATTTCAAGAAGTTCAATTA+CGG + chr8_4:8172843-8172862 None:intergenic 25.0%
! CTTCTTGAAATCAGTAAAAT+TGG - chr8_4:8172851-8172870 Msa1311400:intron 25.0%
! CAATGGAAAAAATTTAGCAT+TGG - chr8_4:8173037-8173056 Msa1311400:intron 25.0%
!! GAAATATGGTAATGTATCTT+TGG + chr8_4:8173345-8173364 None:intergenic 25.0%
!!! TCAGTTATTTTTAGGTTAAC+AGG + chr8_4:8173614-8173633 None:intergenic 25.0%
!! TGATTTTTACATGGATAAAC+AGG - chr8_4:8173631-8173650 Msa1311400:intron 25.0%
!! TTTATTGTGATTTTTGAACC+AGG - chr8_4:8173879-8173898 Msa1311400:intron 25.0%
!! TTATTGTGATTTTTGAACCA+GGG - chr8_4:8173880-8173899 Msa1311400:intron 25.0%
! TCTATTGTCATGAATAGAAA+AGG - chr8_4:8174305-8174324 Msa1311400:intron 25.0%
! AGTTTCTGAATACTAATAGT+TGG - chr8_4:8174463-8174482 Msa1311400:intron 25.0%
!!! AATACTAATAGTTGGTTTTC+TGG - chr8_4:8174471-8174490 Msa1311400:intron 25.0%
! TGGTTGAATTCTCAAAATAT+CGG - chr8_4:8174786-8174805 Msa1311400:intron 25.0%
!! TTTATAATTGGCTTCATTAC+CGG + chr8_4:8174902-8174921 None:intergenic 25.0%
! AATCAGTTGAGCTAAATTTA+TGG + chr8_4:8175332-8175351 None:intergenic 25.0%
! TATTATTGAAATTAGATGGG+AGG + chr8_4:8175575-8175594 None:intergenic 25.0%
! AAAAAAAATTGATTGCACCA+TGG + chr8_4:8175663-8175682 None:intergenic 25.0%
!!! GATATAATAATTTTGAGGGA+AGG + chr8_4:8175857-8175876 None:intergenic 25.0%
!!! AATAAGATAAAATTGGCTTG+TGG - chr8_4:8176048-8176067 Msa1311400:intron 25.0%
!!! GTATTTTAACGGAAAGATAA+CGG - chr8_4:8176163-8176182 Msa1311400:intron 25.0%
! ATTTATTGAGAATTTAAGGG+AGG - chr8_4:8176214-8176233 Msa1311400:intron 25.0%
!! ATGTCATTTAAAGAAAACTC+AGG - chr8_4:8176270-8176289 Msa1311400:intron 25.0%
!! TGTCATTTAAAGAAAACTCA+GGG - chr8_4:8176271-8176290 Msa1311400:intron 25.0%
! CTTTACTCTCAAAAGTAAAT+TGG - chr8_4:8176330-8176349 Msa1311400:intron 25.0%
! TTTCATACCCTTAAAATGTT+TGG - chr8_4:8176407-8176426 Msa1311400:intron 25.0%
!! GATTGAACCAAACATTTTAA+GGG + chr8_4:8176417-8176436 None:intergenic 25.0%
!! TGATTGAACCAAACATTTTA+AGG + chr8_4:8176418-8176437 None:intergenic 25.0%
! ATTCAGCTAGAAATAAAATG+TGG + chr8_4:8176595-8176614 None:intergenic 25.0%
! ACATTAAGTTCAATATAGAG+AGG - chr8_4:8176721-8176740 Msa1311400:intron 25.0%
!!! TGGGAGCATTTATAAAAATA+TGG - chr8_4:8177106-8177125 Msa1311400:intron 25.0%
! AAATTACCATCTAAACAACT+TGG - chr8_4:8177476-8177495 Msa1311400:intron 25.0%
!!! CATGCCAAGTTTTTTTTTTA+AGG + chr8_4:8177512-8177531 None:intergenic 25.0%
!! GGCATGTATTTAACTTATAA+AGG - chr8_4:8177526-8177545 Msa1311400:intron 25.0%
! ATACATTTCGATAAATTGAG+AGG - chr8_4:8177666-8177685 Msa1311400:intron 25.0%
!!! TGTCTCGTTTTTATATACTA+GGG + chr8_4:8177842-8177861 None:intergenic 25.0%
!!! ATGTCTCGTTTTTATATACT+AGG + chr8_4:8177843-8177862 None:intergenic 25.0%
! GTATATAAAAACGAGACATT+AGG - chr8_4:8177844-8177863 Msa1311400:intron 25.0%
! TTAGTAACAAAACGAAAATG+TGG + chr8_4:8178215-8178234 None:intergenic 25.0%
!! TTCTTAATGGATATGGAATT+AGG - chr8_4:8178318-8178337 Msa1311400:intron 25.0%
!! TCTTAATGGATATGGAATTA+GGG - chr8_4:8178319-8178338 Msa1311400:intron 25.0%
! GTTTATTATGATGTGGAAAT+TGG - chr8_4:8178527-8178546 Msa1311400:intron 25.0%
! CAAAACAAGGACTATAAATT+TGG - chr8_4:8178613-8178632 Msa1311400:CDS 25.0%
!!! TTTAGTCAATTTTTGGATTC+TGG - chr8_4:8178756-8178775 Msa1311400:intron 25.0%
!! GAATGAACTACATAGATTTT+GGG - chr8_4:8178901-8178920 Msa1311400:intron 25.0%
! AATAACTGTAAAACCAACAA+TGG + chr8_4:8179023-8179042 None:intergenic 25.0%
! CTTCTGATAATTAATTCTTC+AGG - chr8_4:8179063-8179082 Msa1311400:intron 25.0%
! AACATTCATGTACAAAGATT+AGG + chr8_4:8179152-8179171 None:intergenic 25.0%
! AAGAATTAAAATTAGGACCA+CGG + chr8_4:8179180-8179199 None:intergenic 25.0%
!!! TTTGAACCAAGATATTTTGA+CGG - chr8_4:8179242-8179261 Msa1311400:intron 25.0%
!!! ATATTTTGACGGTTTCATTT+AGG - chr8_4:8179253-8179272 Msa1311400:intron 25.0%
! TCAACTTAAACATAATCAAG+CGG + chr8_4:8180311-8180330 None:intergenic 25.0%
!!! TTTTTACTTTGTTGTGGAAT+TGG - chr8_4:8180448-8180467 Msa1311400:intron 25.0%
!!! GTTATGACATTTTTTTTGTG+TGG - chr8_4:8180511-8180530 Msa1311400:intron 25.0%
! AAACTGAAGTTCCATATATA+AGG + chr8_4:8180592-8180611 None:intergenic 25.0%
! TTCAAAAAAAAAAAGGCAAG+AGG + chr8_4:8180789-8180808 None:intergenic 25.0%
! CAAGAAAATAGGAATGAAAT+TGG + chr8_4:8180964-8180983 None:intergenic 25.0%
! AAAAAGAAAGGCAAGAAAAT+AGG + chr8_4:8180975-8180994 None:intergenic 25.0%
!! ACTTAACATGTATTTTCTCA+CGG - chr8_4:8181079-8181098 Msa1311400:intron 25.0%
!! TCTTTTACTGAAATACTGAT+AGG - chr8_4:8181282-8181301 Msa1311400:intron 25.0%
!!! AAACAGTTTTGGATATTCAA+GGG + chr8_4:8181517-8181536 None:intergenic 25.0%
!!! AAAACAGTTTTGGATATTCA+AGG + chr8_4:8181518-8181537 None:intergenic 25.0%
!! TGAATATCCAAAACTGTTTT+AGG - chr8_4:8181518-8181537 Msa1311400:intron 25.0%
! TAGTAAAGGAAAATATGTTG+GGG + chr8_4:8181564-8181583 None:intergenic 25.0%
! ACATCTTATCATAAATCTCA+TGG - chr8_4:8181653-8181672 Msa1311400:intron 25.0%
! TAAACCCCATCAAATTAATA+TGG - chr8_4:8181956-8181975 Msa1311400:intron 25.0%
!!! TAATGATGGATGATTCTTTA+TGG - chr8_4:8182057-8182076 Msa1311400:intron 25.0%
! ATACTCTCAAAATTAAGGTT+GGG + chr8_4:8182511-8182530 None:intergenic 25.0%
! TATACTCTCAAAATTAAGGT+TGG + chr8_4:8182512-8182531 None:intergenic 25.0%
! TTGATTGAAGAAAGATTTGA+AGG + chr8_4:8182647-8182666 None:intergenic 25.0%
!!! TGTAATTGTTTTAGATATGG+TGG - chr8_4:8182912-8182931 Msa1311400:intron 25.0%
!! TTTGGGGTTTATATATAATG+TGG - chr8_4:8182993-8183012 Msa1311400:intron 25.0%
! TTGGGGTTTATATATAATGT+GGG - chr8_4:8182994-8183013 Msa1311400:intron 25.0%
! CGTATTATTTAATCCTGAAA+TGG - chr8_4:8183186-8183205 Msa1311400:intron 25.0%
!! ATTTCATTTCCCTTATCTTT+TGG - chr8_4:8183325-8183344 Msa1311400:intron 25.0%
! GTCTCAATGTTATTATTTGT+TGG - chr8_4:8183555-8183574 Msa1311400:intron 25.0%
!!! ATATTTTGGTTGTTTCATCT+AGG - chr8_4:8183610-8183629 Msa1311400:intron 25.0%
! TTAAAGATCAGTTAATCACT+TGG - chr8_4:8184038-8184057 Msa1311400:intron 25.0%
! CAAAACCAGTATAAAAATTG+TGG + chr8_4:8184090-8184109 None:intergenic 25.0%
!!! CACAATTTTTATACTGGTTT+TGG - chr8_4:8184088-8184107 Msa1311400:intron 25.0%
!! TGTTTAAATGTTATTTGGCT+TGG - chr8_4:8184112-8184131 Msa1311400:intron 25.0%
!! GTTTAAATGTTATTTGGCTT+GGG - chr8_4:8184113-8184132 Msa1311400:intron 25.0%
! TCAATTTCAACATATACATG+AGG + chr8_4:8184323-8184342 None:intergenic 25.0%
! TATTCCTTAGTAATATGTTC+AGG - chr8_4:8184382-8184401 Msa1311400:intron 25.0%
! TTAATAATCTCTGCAATTAC+AGG - chr8_4:8184416-8184435 Msa1311400:intron 25.0%
! GTATTCAAGGAAAAAAAGTT+AGG + chr8_4:8184669-8184688 None:intergenic 25.0%
! ACTAATGCAATACAAAAACA+TGG + chr8_4:8184783-8184802 None:intergenic 25.0%
AATCAATGAAGAACGAACAT+AGG + chr8_4:8170292-8170311 None:intergenic 30.0%
ACTACTTTCAATTTCACTCT+TGG - chr8_4:8170443-8170462 Msa1311400:CDS 30.0%
TGGAATGTATTGAAATGAGT+TGG - chr8_4:8170704-8170723 Msa1311400:CDS 30.0%
! GTATTGAAATGAGTTGGAAA+CGG - chr8_4:8170710-8170729 Msa1311400:intron 30.0%
! TGTCATAAGTTTTGCAGTAT+TGG - chr8_4:8170746-8170765 Msa1311400:intron 30.0%
!!! AACTTTTTTACAGCTAGCTT+TGG + chr8_4:8170939-8170958 None:intergenic 30.0%
CTAGCTGTAAAAAAGTTCTT+CGG - chr8_4:8170942-8170961 Msa1311400:intron 30.0%
AACTTAGAATTTGCAATCCA+TGG - chr8_4:8171125-8171144 Msa1311400:intron 30.0%
!! TTTTCAGGGCAAGTTATTAA+AGG - chr8_4:8171210-8171229 Msa1311400:CDS 30.0%
TAGTGTGAAGGATATATGTA+AGG - chr8_4:8171380-8171399 Msa1311400:CDS 30.0%
TTAAGAAGATAGTTAAGGAG+GGG - chr8_4:8171415-8171434 Msa1311400:CDS 30.0%
AATACTTCATCAAGATCCTT+GGG + chr8_4:8171456-8171475 None:intergenic 30.0%
TAATACTTCATCAAGATCCT+TGG + chr8_4:8171457-8171476 None:intergenic 30.0%
! AAGGATCTTGATGAAGTATT+AGG - chr8_4:8171456-8171475 Msa1311400:CDS 30.0%
! TCCTTTATGAAGGTTTTCAT+TGG - chr8_4:8171861-8171880 Msa1311400:intron 30.0%
ACCAATGAAAACCTTCATAA+AGG + chr8_4:8171865-8171884 None:intergenic 30.0%
! TATTGTGTGATAGATGGATT+TGG - chr8_4:8171909-8171928 Msa1311400:intron 30.0%
GGTTATCAAAAAGATTGTCA+AGG - chr8_4:8172049-8172068 Msa1311400:intron 30.0%
ATCAAAAAGATTGTCAAGGA+AGG - chr8_4:8172053-8172072 Msa1311400:intron 30.0%
GTAAATCATCATTGATGCTA+AGG - chr8_4:8172117-8172136 Msa1311400:intron 30.0%
TTTGAATTCACAACAGATGA+GGG - chr8_4:8172293-8172312 Msa1311400:intron 30.0%
CAAAAACAAATTTATGGGAG+AGG + chr8_4:8172346-8172365 None:intergenic 30.0%
AATACAAGGTTGAATTAGGA+GGG + chr8_4:8172532-8172551 None:intergenic 30.0%
TAATACAAGGTTGAATTAGG+AGG + chr8_4:8172533-8172552 None:intergenic 30.0%
TAACTCAACCTCATAATACA+AGG + chr8_4:8172546-8172565 None:intergenic 30.0%
! GCATTGATAGATTTCACTAT+TGG - chr8_4:8172615-8172634 Msa1311400:intron 30.0%
ATCAAGAAAAACATCAGACT+TGG + chr8_4:8172762-8172781 None:intergenic 30.0%
TTCTCTTGGAACAATATGAA+GGG - chr8_4:8172923-8172942 Msa1311400:intron 30.0%
! AAATGCTTAACTGTGCTTTT+AGG - chr8_4:8172946-8172965 Msa1311400:intron 30.0%
! AATGCTTAACTGTGCTTTTA+GGG - chr8_4:8172947-8172966 Msa1311400:intron 30.0%
!! ATATGCACTGATTCAAACAA+TGG - chr8_4:8173020-8173039 Msa1311400:intron 30.0%
!! AAAATTTAGCATTGGTTAGC+AGG - chr8_4:8173045-8173064 Msa1311400:intron 30.0%
!! AAATTTAGCATTGGTTAGCA+GGG - chr8_4:8173046-8173065 Msa1311400:intron 30.0%
! AGCTTCTAAAAGATATGAGA+AGG - chr8_4:8173316-8173335 Msa1311400:intron 30.0%
! CAGATTACAAGCAATTTTCA+AGG + chr8_4:8173489-8173508 None:intergenic 30.0%
GAAGTTGAAAGACTATAAAC+AGG - chr8_4:8173529-8173548 Msa1311400:intron 30.0%
AGAACAATTACCTGTTGTTA+GGG + chr8_4:8173772-8173791 None:intergenic 30.0%
TAGAACAATTACCTGTTGTT+AGG + chr8_4:8173773-8173792 None:intergenic 30.0%
! AACTATTTGTATCATTGGCT+AGG - chr8_4:8173841-8173860 Msa1311400:intron 30.0%
! GTACAAGACTTTGAAAGAAA+AGG - chr8_4:8173916-8173935 Msa1311400:intron 30.0%
!!! GATTTTAAGGCATGTCATTT+GGG - chr8_4:8174273-8174292 Msa1311400:intron 30.0%
TCTACAATGTCAAACAACTT+CGG + chr8_4:8174352-8174371 None:intergenic 30.0%
! GTAGATTTTGCATTATGTAG+TGG - chr8_4:8174367-8174386 Msa1311400:intron 30.0%
!! TTGTGTTTGATGGTGAAATT+TGG + chr8_4:8174676-8174695 None:intergenic 30.0%
TGATTGATTGTTGTGTTTGA+TGG + chr8_4:8174686-8174705 None:intergenic 30.0%
CAACAATCAATCAATCTTTG+AGG - chr8_4:8174693-8174712 Msa1311400:intron 30.0%
AAGAATATGAAAGGAATGAG+AGG + chr8_4:8174875-8174894 None:intergenic 30.0%
! TCCTTTCATATTCTTTTGAC+CGG - chr8_4:8174880-8174899 Msa1311400:CDS 30.0%
AAACTATAGAAGAATCTGAG+AGG - chr8_4:8174951-8174970 Msa1311400:intron 30.0%
!!! CTTTTGTTTTTCCTGTTCTT+TGG - chr8_4:8175041-8175060 Msa1311400:CDS 30.0%
AAATGTAACTACCAAAGAAC+AGG + chr8_4:8175055-8175074 None:intergenic 30.0%
GATGTTACTAAGCAATTGTT+AGG - chr8_4:8175122-8175141 Msa1311400:CDS 30.0%
TAAAACCGATAATGAGTTAG+AGG + chr8_4:8175184-8175203 None:intergenic 30.0%
GTTAATGGAGTCAAATAGAA+GGG + chr8_4:8175607-8175626 None:intergenic 30.0%
AGTTAATGGAGTCAAATAGA+AGG + chr8_4:8175608-8175627 None:intergenic 30.0%
TGGATTAAGCAGATAGTTAA+TGG + chr8_4:8175622-8175641 None:intergenic 30.0%
TAATCCAAATACTTCATCGA+TGG - chr8_4:8175754-8175773 Msa1311400:CDS 30.0%
! AAGACTAAAACAAGTTGAAG+AGG + chr8_4:8175810-8175829 None:intergenic 30.0%
! ATAACGGTGTTAAAAGAGAA+GGG - chr8_4:8176179-8176198 Msa1311400:intron 30.0%
GTCATTTAAAGAAAACTCAG+GGG - chr8_4:8176272-8176291 Msa1311400:intron 30.0%
!! AAGTAAATTGGCCATTTTAG+AGG - chr8_4:8176342-8176361 Msa1311400:intron 30.0%
! TATTTGGGATGTTAAAAGTG+TGG - chr8_4:8176657-8176676 Msa1311400:intron 30.0%
! CCATGATTAATGACATTTTG+AGG + chr8_4:8176751-8176770 None:intergenic 30.0%
CCTCAAAATGTCATTAATCA+TGG - chr8_4:8176748-8176767 Msa1311400:intron 30.0%
AATTCATTCTTCAACTTGGT+AGG - chr8_4:8176963-8176982 Msa1311400:intron 30.0%
ATTCCTAAATCGTTTATGAG+TGG - chr8_4:8177358-8177377 Msa1311400:intron 30.0%
ATACCACTCATAAACGATTT+AGG + chr8_4:8177364-8177383 None:intergenic 30.0%
TATATGCCAAGTTGTTTAGA+TGG + chr8_4:8177485-8177504 None:intergenic 30.0%
! TTTTGATCGAGTTTTTGTAG+AGG + chr8_4:8177580-8177599 None:intergenic 30.0%
!!! TTCGATTGACTTTTTTGCAT+TGG + chr8_4:8177611-8177630 None:intergenic 30.0%
AGGGACTATAAAGCAAATTA+GGG - chr8_4:8177705-8177724 Msa1311400:intron 30.0%
! TCTGTCTGTGTTTAGATTTT+TGG - chr8_4:8178249-8178268 Msa1311400:intron 30.0%
!!! ACGATTTTGTTACTTTGTTG+TGG - chr8_4:8178286-8178305 Msa1311400:intron 30.0%
! TTACTTTGTTGTGGAATTTG+CGG - chr8_4:8178295-8178314 Msa1311400:intron 30.0%
CGTTATGGTTTATTATGATG+TGG - chr8_4:8178520-8178539 Msa1311400:intron 30.0%
!! TTTTATAGAGTGCCAATTCT+CGG - chr8_4:8178565-8178584 Msa1311400:intron 30.0%
ATAATCCAAAAACCGAGAAT+TGG + chr8_4:8178580-8178599 None:intergenic 30.0%
AAAGAAAAAATACAAGGGAG+CGG + chr8_4:8178660-8178679 None:intergenic 30.0%
!!! TTCTTTATTTTGTGTGCTGA+TGG - chr8_4:8178674-8178693 Msa1311400:CDS 30.0%
! CTGATGGCTTTTAGATTTTA+TGG - chr8_4:8178690-8178709 Msa1311400:CDS 30.0%
! GTTTTTCTGTTTTGCATAAG+AGG + chr8_4:8178879-8178898 None:intergenic 30.0%
CTTATGCAAAACAGAAAAAC+TGG - chr8_4:8178879-8178898 Msa1311400:intron 30.0%
! GGAATGAACTACATAGATTT+TGG - chr8_4:8178900-8178919 Msa1311400:intron 30.0%
TCAAACAGTAGTTCATATTC+TGG - chr8_4:8178933-8178952 Msa1311400:intron 30.0%
TTCATATTCTGGACAGTAAA+AGG - chr8_4:8178944-8178963 Msa1311400:intron 30.0%
GGATAGTAGATACATCAATT+AGG - chr8_4:8178965-8178984 Msa1311400:intron 30.0%
ATGAAACCGTCAAAATATCT+TGG + chr8_4:8179251-8179270 None:intergenic 30.0%
TGTAAACCACATTTAGCAAA+CGG + chr8_4:8179431-8179450 None:intergenic 30.0%
AAAGAAAATTGCTGCCAAAA+AGG - chr8_4:8179572-8179591 Msa1311400:intron 30.0%
TCAAGTACAATAGCAAGTAA+TGG + chr8_4:8179819-8179838 None:intergenic 30.0%
! TTGATTTATGTGTAACTTGC+AGG - chr8_4:8179956-8179975 Msa1311400:intron 30.0%
GTCTAATGTCATCATTCTAA+AGG + chr8_4:8180351-8180370 None:intergenic 30.0%
AAAAACGAATGCGCTAAAAA+AGG + chr8_4:8180373-8180392 None:intergenic 30.0%
ACCAAAAATCAAGAGACAAT+GGG + chr8_4:8180409-8180428 None:intergenic 30.0%
!!! ACCAGTTTTTTACTTTGTTG+TGG - chr8_4:8180442-8180461 Msa1311400:intron 30.0%
TCCACAACAAAGTAAAAAAC+TGG + chr8_4:8180446-8180465 None:intergenic 30.0%
ATAACTAAACAACTCCATGA+AGG + chr8_4:8180496-8180515 None:intergenic 30.0%
!!! TGACATTTTTTTTGTGTGGA+CGG - chr8_4:8180515-8180534 Msa1311400:intron 30.0%
! GGAATTTGAAGCCTTATATA+TGG - chr8_4:8180578-8180597 Msa1311400:intron 30.0%
! AAACCTAATTTGCAAATGAG+CGG + chr8_4:8180704-8180723 None:intergenic 30.0%
AAAAAAAAAGGCAAGAGGAT+AGG + chr8_4:8180784-8180803 None:intergenic 30.0%
! AAACGTAATTTGCAAATGAG+CGG + chr8_4:8180896-8180915 None:intergenic 30.0%
! CTTAACATGTATTTTCTCAC+GGG - chr8_4:8181080-8181099 Msa1311400:intron 30.0%
TACGAAATTAGACGTTACAT+TGG + chr8_4:8181199-8181218 None:intergenic 30.0%
AACGTCTAATTTCGTATATG+AGG - chr8_4:8181203-8181222 Msa1311400:intron 30.0%
AAGACCAATCTATAGTGTTA+TGG - chr8_4:8181715-8181734 Msa1311400:intron 30.0%
TGTGTGTGTAATAGATTATG+TGG + chr8_4:8181755-8181774 None:intergenic 30.0%
! GGTTCCATATTAATTTGATG+GGG + chr8_4:8181963-8181982 None:intergenic 30.0%
! GGGTTCCATATTAATTTGAT+GGG + chr8_4:8181964-8181983 None:intergenic 30.0%
! TGGGTTCCATATTAATTTGA+TGG + chr8_4:8181965-8181984 None:intergenic 30.0%
AACCCACGTAATAAAATATG+TGG - chr8_4:8181979-8181998 Msa1311400:intron 30.0%
ACCCACGTAATAAAATATGT+GGG - chr8_4:8181980-8181999 Msa1311400:intron 30.0%
! ACCCACATATTTTATTACGT+GGG + chr8_4:8181984-8182003 None:intergenic 30.0%
! AACCCACATATTTTATTACG+TGG + chr8_4:8181985-8182004 None:intergenic 30.0%
!!! GATTAATGTTTTTTTGGTGG+TGG - chr8_4:8182146-8182165 Msa1311400:intron 30.0%
!!! GATTGTTGATTTTGAATCTC+AGG - chr8_4:8182716-8182735 Msa1311400:intron 30.0%
GAAAAATGTTAGCAAGAAAG+AGG - chr8_4:8183932-8183951 Msa1311400:intron 30.0%
AATTGTGGGCATAAGTATAA+AGG + chr8_4:8184075-8184094 None:intergenic 30.0%
! TATGCCCACAATTTTTATAC+TGG - chr8_4:8184082-8184101 Msa1311400:intron 30.0%
!!! TGGATTTAGTTTTAGATGTC+TGG - chr8_4:8184275-8184294 Msa1311400:intron 30.0%
!!! TAGTTTTAGATGTCTGGATA+AGG - chr8_4:8184281-8184300 Msa1311400:intron 30.0%
ATTTCAACATATACATGAGG+TGG + chr8_4:8184320-8184339 None:intergenic 30.0%
CTTTCCTGAACATATTACTA+AGG + chr8_4:8184389-8184408 None:intergenic 30.0%
ATGGAAACAATACAATCAAG+CGG + chr8_4:8184764-8184783 None:intergenic 30.0%
GATAATCCAATTCTCAAGGT+CGG - chr8_4:8170168-8170187 Msa1311400:three_prime_UTR 35.0%
AAGAAGAAGCTTCTCAAAGA+AGG - chr8_4:8170222-8170241 Msa1311400:three_prime_UTR 35.0%
AGTTTGATTCTAGCAGAGAT+AGG - chr8_4:8170417-8170436 Msa1311400:CDS 35.0%
GTTTGATTCTAGCAGAGATA+GGG - chr8_4:8170418-8170437 Msa1311400:CDS 35.0%
TTTGATTCTAGCAGAGATAG+GGG - chr8_4:8170419-8170438 Msa1311400:CDS 35.0%
TTCAATTTCACTCTTGGACA+AGG - chr8_4:8170449-8170468 Msa1311400:CDS 35.0%
AATAGCTAATTCACAAGCAC+TGG + chr8_4:8170608-8170627 None:intergenic 35.0%
TTGAATGCAATCATATGTGC+TGG + chr8_4:8170795-8170814 None:intergenic 35.0%
TAGTATCTGATCGCAGTAAT+TGG - chr8_4:8170985-8171004 Msa1311400:intron 35.0%
TAGAATTTGCAATCCATGGT+TGG - chr8_4:8171129-8171148 Msa1311400:intron 35.0%
TTATGTTTGTCAACCAACCA+TGG + chr8_4:8171145-8171164 None:intergenic 35.0%
AGGGCAAGTTATTAAAGGAT+GGG - chr8_4:8171215-8171234 Msa1311400:CDS 35.0%
AGTTATTAAAGGATGGGATG+AGG - chr8_4:8171221-8171240 Msa1311400:CDS 35.0%
GTTATTAAAGGATGGGATGA+GGG - chr8_4:8171222-8171241 Msa1311400:CDS 35.0%
TTATTAAAGGATGGGATGAG+GGG - chr8_4:8171223-8171242 Msa1311400:CDS 35.0%
GGGATTAAAACCATGAAGAA+AGG - chr8_4:8171243-8171262 Msa1311400:CDS 35.0%
! AGCATTTTCACCTTTCTTCA+TGG + chr8_4:8171256-8171275 None:intergenic 35.0%
TCAAATTGCAGAGTAGCATT+AGG + chr8_4:8171339-8171358 None:intergenic 35.0%
GTGAAGGATATATGTAAGGA+TGG - chr8_4:8171384-8171403 Msa1311400:CDS 35.0%
AAGGATATATGTAAGGATGG+AGG - chr8_4:8171387-8171406 Msa1311400:CDS 35.0%
TAAGAAGATAGTTAAGGAGG+GGG - chr8_4:8171416-8171435 Msa1311400:CDS 35.0%
ATACTTCATCAAGATCCTTG+GGG + chr8_4:8171455-8171474 None:intergenic 35.0%
TACTTAACTGCAACAACACA+AGG + chr8_4:8171556-8171575 None:intergenic 35.0%
AGTAGCAAAATCTGATGAAG+TGG - chr8_4:8171603-8171622 Msa1311400:intron 35.0%
GACAAAAATAACCTGTCTCA+TGG + chr8_4:8171727-8171746 None:intergenic 35.0%
! TTTTTGTCCTGCATTGTCAA+AGG - chr8_4:8171739-8171758 Msa1311400:intron 35.0%
GCTGTTAAGACTATGAAGAA+GGG - chr8_4:8171761-8171780 Msa1311400:intron 35.0%
TGTGTGGAAAACTTACATTG+TGG + chr8_4:8171812-8171831 None:intergenic 35.0%
! AAGTTTTCCACACAACACTA+TGG - chr8_4:8171818-8171837 Msa1311400:intron 35.0%
! AGTTTTCCACACAACACTAT+GGG - chr8_4:8171819-8171838 Msa1311400:intron 35.0%
!! ATAGATGGATTTGGTGAGAA+AGG - chr8_4:8171918-8171937 Msa1311400:intron 35.0%
GTAATCTCCAATGTTGCATT+AGG + chr8_4:8171978-8171997 None:intergenic 35.0%
! TTACCCTTGAGTTAGTTTCT+TGG - chr8_4:8171994-8172013 Msa1311400:intron 35.0%
CTTCCAAGAAACTAACTCAA+GGG + chr8_4:8172000-8172019 None:intergenic 35.0%
TCTTCCAAGAAACTAACTCA+AGG + chr8_4:8172001-8172020 None:intergenic 35.0%
CTTCTTGTCATCAGTTACTT+CGG + chr8_4:8172030-8172049 None:intergenic 35.0%
TTTACAACAGCTCCATCATT+TGG + chr8_4:8172095-8172114 None:intergenic 35.0%
ATCTTTGCAGTGAAACTAAC+TGG - chr8_4:8172209-8172228 Msa1311400:intron 35.0%
!! TGGCACTGTATTTTTGAAGA+AGG - chr8_4:8172244-8172263 Msa1311400:intron 35.0%
!! GGCACTGTATTTTTGAAGAA+GGG - chr8_4:8172245-8172264 Msa1311400:intron 35.0%
GTTTGAATTCACAACAGATG+AGG - chr8_4:8172292-8172311 Msa1311400:intron 35.0%
AAACATTCACTTCTGTCAGT+TGG + chr8_4:8172371-8172390 None:intergenic 35.0%
TTGAAAGGAACTTGGCAATT+AGG - chr8_4:8172655-8172674 Msa1311400:intron 35.0%
CAAAGATTCAGAACAAACCA+TGG - chr8_4:8172697-8172716 Msa1311400:intron 35.0%
ATAAATAGAAGGCAGTTCCA+TGG + chr8_4:8172717-8172736 None:intergenic 35.0%
ATCTGGAAAGTTACTTCTCT+TGG - chr8_4:8172909-8172928 Msa1311400:intron 35.0%
CTTCTCTTGGAACAATATGA+AGG - chr8_4:8172922-8172941 Msa1311400:intron 35.0%
! TCAAATTCCTCAGTGTTTTC+TGG - chr8_4:8173095-8173114 Msa1311400:intron 35.0%
CATTGTCCATTACTTGCTTT+AGG - chr8_4:8173193-8173212 Msa1311400:intron 35.0%
CCTTATCCTAAAGCAAGTAA+TGG + chr8_4:8173202-8173221 None:intergenic 35.0%
!! CCATTACTTGCTTTAGGATA+AGG - chr8_4:8173199-8173218 Msa1311400:intron 35.0%
!! GGGAATGATTTGTTCAAAAC+CGG - chr8_4:8173281-8173300 Msa1311400:intron 35.0%
!! GGAATGATTTGTTCAAAACC+GGG - chr8_4:8173282-8173301 Msa1311400:intron 35.0%
! AGAAGCTTTTGCATATTTCC+CGG + chr8_4:8173303-8173322 None:intergenic 35.0%
TTGAAGATGAGGGTGAAATA+TGG + chr8_4:8173359-8173378 None:intergenic 35.0%
AAAGGGGTAATTATAGACTG+TGG - chr8_4:8173808-8173827 Msa1311400:intron 35.0%
! GACTTTGAAAGAAAAGGTGA+AGG - chr8_4:8173922-8173941 Msa1311400:intron 35.0%
GGTGAAGGAGATCAATAAAA+AGG - chr8_4:8173937-8173956 Msa1311400:intron 35.0%
AAAAAGGACGCAAAGTTCTA+TGG - chr8_4:8173953-8173972 Msa1311400:intron 35.0%
AAAAGGACGCAAAGTTCTAT+GGG - chr8_4:8173954-8173973 Msa1311400:intron 35.0%
GTTCAGTAAAATGACGAAGT+TGG - chr8_4:8173982-8174001 Msa1311400:intron 35.0%
CATTAATCAGTCAGTAGAGA+TGG + chr8_4:8174031-8174050 None:intergenic 35.0%
!!! GATTAATGCTTTTTCGCTTC+TGG - chr8_4:8174043-8174062 Msa1311400:intron 35.0%
!!! GGATTTTAAGGCATGTCATT+TGG - chr8_4:8174272-8174291 Msa1311400:intron 35.0%
! CATTATGTAGTGGAACCATT+TGG - chr8_4:8174377-8174396 Msa1311400:intron 35.0%
CAAACAAGAATGTGACCAAA+TGG + chr8_4:8174395-8174414 None:intergenic 35.0%
!! TTTTCTGGTGTACTATCTGA+GGG - chr8_4:8174486-8174505 Msa1311400:intron 35.0%
TTGGAGAAAGTGGTATTCAA+TGG - chr8_4:8174529-8174548 Msa1311400:intron 35.0%
GTGAATGCATGATCATAACT+TGG - chr8_4:8174766-8174785 Msa1311400:intron 35.0%
!! AGCTATTTTAAAGGCCAAGT+AGG - chr8_4:8174839-8174858 Msa1311400:intron 35.0%
ACCGGTCAAAAGAATATGAA+AGG + chr8_4:8174884-8174903 None:intergenic 35.0%
! CGTTAATGTCGTTCTTTTTG+AGG + chr8_4:8174926-8174945 None:intergenic 35.0%
TATAGAAGAATCTGAGAGGA+GGG - chr8_4:8174955-8174974 Msa1311400:intron 35.0%
AACAAAAGAAATCTACCTGC+AGG + chr8_4:8175029-8175048 None:intergenic 35.0%
GTTACTAAGCAATTGTTAGG+TGG - chr8_4:8175125-8175144 Msa1311400:CDS 35.0%
CATGACCTCTAACTCATTAT+CGG - chr8_4:8175176-8175195 Msa1311400:intron 35.0%
ATTTACAATGACCTACCCTA+AGG - chr8_4:8175530-8175549 Msa1311400:intron 35.0%
! TGTCATTTAGCCAAACCTTA+GGG + chr8_4:8175548-8175567 None:intergenic 35.0%
!! AGGTACACATATTAGCTTTC+TGG + chr8_4:8175837-8175856 None:intergenic 35.0%
GCTTAGAAAAAAGGGTTAGA+TGG + chr8_4:8175978-8175997 None:intergenic 35.0%
TCTGGTGTGCTTAGAAAAAA+GGG + chr8_4:8175986-8176005 None:intergenic 35.0%
TTCTGGTGTGCTTAGAAAAA+AGG + chr8_4:8175987-8176006 None:intergenic 35.0%
TGCTTAATAAATCCCTAGCT+GGG + chr8_4:8176018-8176037 None:intergenic 35.0%
ATGCTTAATAAATCCCTAGC+TGG + chr8_4:8176019-8176038 None:intergenic 35.0%
CACTGCATTAGAATCATAGA+AGG + chr8_4:8176117-8176136 None:intergenic 35.0%
TATGATTCTAATGCAGTGTG+AGG - chr8_4:8176119-8176138 Msa1311400:intron 35.0%
! GATAACGGTGTTAAAAGAGA+AGG - chr8_4:8176178-8176197 Msa1311400:intron 35.0%
ATTTAAAGAAAACTCAGGGG+AGG - chr8_4:8176275-8176294 Msa1311400:intron 35.0%
! GAGCAAAAACTCCTCTAAAA+TGG + chr8_4:8176356-8176375 None:intergenic 35.0%
! TGTTTGGTTCAATCATTTCC+AGG - chr8_4:8176423-8176442 Msa1311400:intron 35.0%
TGTGTGATCAATTTCACTTG+AGG + chr8_4:8176465-8176484 None:intergenic 35.0%
TAGCTAGCATAATCTTTCTC+TGG + chr8_4:8176624-8176643 None:intergenic 35.0%
! ACTTATAAAGGTTTGCTCCA+TGG - chr8_4:8177538-8177557 Msa1311400:intron 35.0%
TTGTAGAGGTTAAGCAACAT+GGG + chr8_4:8177566-8177585 None:intergenic 35.0%
TTTGTAGAGGTTAAGCAACA+TGG + chr8_4:8177567-8177586 None:intergenic 35.0%
! CGAAATGTATCTTTTCAACG+AGG - chr8_4:8177627-8177646 Msa1311400:intron 35.0%
TATCGAAATGTATCTCTCGA+TGG + chr8_4:8177659-8177678 None:intergenic 35.0%
AGGCTTATGAGCAAATAAGA+GGG - chr8_4:8177686-8177705 Msa1311400:intron 35.0%
GAGGGACTATAAAGCAAATT+AGG - chr8_4:8177704-8177723 Msa1311400:intron 35.0%
GAAAGCCCAACTAGATATTT+AGG + chr8_4:8177791-8177810 None:intergenic 35.0%
TTCTTTGTGAAATGCATGCA+TGG - chr8_4:8177808-8177827 Msa1311400:intron 35.0%
AAAACGAGACATTAGGGTTT+AGG - chr8_4:8177851-8177870 Msa1311400:intron 35.0%
TGAAGGATGTTTGTGAATGA+AGG + chr8_4:8177944-8177963 None:intergenic 35.0%
TTCACAAACATCCTTCAACA+TGG - chr8_4:8177947-8177966 Msa1311400:intron 35.0%
TCACAAACATCCTTCAACAT+GGG - chr8_4:8177948-8177967 Msa1311400:intron 35.0%
AAGATATCTACCCATGTTGA+AGG + chr8_4:8177961-8177980 None:intergenic 35.0%
! TTTGCGGTTCTTAATGGATA+TGG - chr8_4:8178311-8178330 Msa1311400:intron 35.0%
TTCATGAAGGATTCCATTCA+GGG + chr8_4:8178462-8178481 None:intergenic 35.0%
ACAGCTAAACAACTTCATGA+AGG + chr8_4:8178475-8178494 None:intergenic 35.0%
TGTGACATTTGTGTGTGTAT+GGG - chr8_4:8178492-8178511 Msa1311400:intron 35.0%
GCTCTTTGAATGACAAAACA+AGG - chr8_4:8178600-8178619 Msa1311400:CDS 35.0%
!! TACATGAATGTTTTGAACCG+TGG - chr8_4:8179160-8179179 Msa1311400:intron 35.0%
GTTTCATTTAGGTATGAGCT+CGG - chr8_4:8179264-8179283 Msa1311400:intron 35.0%
!! TGTTTTGTTGCTTGATAGCT+TGG + chr8_4:8179307-8179326 None:intergenic 35.0%
TATCAAGCAACAAAACAGTG+AGG - chr8_4:8179310-8179329 Msa1311400:intron 35.0%
!! GAAATGTAGAGCTTTGAGAT+TGG - chr8_4:8179359-8179378 Msa1311400:intron 35.0%
GTAAACCACATTTAGCAAAC+GGG + chr8_4:8179430-8179449 None:intergenic 35.0%
! TTTCAACACCATAGTGTTGA+AGG + chr8_4:8179542-8179561 None:intergenic 35.0%
! CAACACTATGGTGTTGAAAT+TGG - chr8_4:8179543-8179562 Msa1311400:intron 35.0%
TAAACTGCTGCAATATGTTC+AGG - chr8_4:8179648-8179667 Msa1311400:intron 35.0%
CTTTCCCATTAGATAAAGAG+CGG - chr8_4:8179878-8179897 Msa1311400:intron 35.0%
TTCACCGCTCTTTATCTAAT+GGG + chr8_4:8179885-8179904 None:intergenic 35.0%
ATTCACCGCTCTTTATCTAA+TGG + chr8_4:8179886-8179905 None:intergenic 35.0%
! ATTTATGTGTAACTTGCAGG+AGG - chr8_4:8179959-8179978 Msa1311400:intron 35.0%
GACCAAAAATCAAGAGACAA+TGG + chr8_4:8180410-8180429 None:intergenic 35.0%
CAAATGAGCGGGAAAAAATT+AGG + chr8_4:8180692-8180711 None:intergenic 35.0%
! AACCTAATTTGCAAATGAGC+GGG + chr8_4:8180703-8180722 None:intergenic 35.0%
CAAGAGGATAGGAATGAAAT+TGG + chr8_4:8180773-8180792 None:intergenic 35.0%
! AACGTAATTTGCAAATGAGC+GGG + chr8_4:8180895-8180914 None:intergenic 35.0%
CAATATCTTTAGTCCTTCTC+TGG + chr8_4:8181151-8181170 None:intergenic 35.0%
ATATTGATCGCTGATGAAGA+TGG - chr8_4:8181165-8181184 Msa1311400:intron 35.0%
! ATGGATACACATTTTCTCGT+AGG - chr8_4:8181672-8181691 Msa1311400:intron 35.0%
TCGTAGGAGATAATTCTGTA+TGG - chr8_4:8181688-8181707 Msa1311400:intron 35.0%
TGTGCCATAACACTATAGAT+TGG + chr8_4:8181722-8181741 None:intergenic 35.0%
TAAAATGCGCCTGTTTATGA+TGG - chr8_4:8182463-8182482 Msa1311400:intron 35.0%
AAAATGCGCCTGTTTATGAT+GGG - chr8_4:8182464-8182483 Msa1311400:intron 35.0%
TTCATCCAGTTTCTTCAAGA+TGG - chr8_4:8182604-8182623 Msa1311400:intron 35.0%
TCATCCAGTTTCTTCAAGAT+GGG - chr8_4:8182605-8182624 Msa1311400:intron 35.0%
! TGATTTGTGTGTTGAGATTC+TGG - chr8_4:8182866-8182885 Msa1311400:intron 35.0%
GATTTGTGTGTTGAGATTCT+GGG - chr8_4:8182867-8182886 Msa1311400:intron 35.0%
!! TGTGGGTGGTTATTTGATTT+TGG - chr8_4:8182975-8182994 Msa1311400:intron 35.0%
!! GTGGGTGGTTATTTGATTTT+GGG - chr8_4:8182976-8182995 Msa1311400:intron 35.0%
!! TGGGTGGTTATTTGATTTTG+GGG - chr8_4:8182977-8182996 Msa1311400:intron 35.0%
!! TGGGATAGTTATTTTGTACC+AGG - chr8_4:8183398-8183417 Msa1311400:intron 35.0%
ATCAGAAAATATGTGCTACC+TGG + chr8_4:8183419-8183438 None:intergenic 35.0%
!!! CTTGATAGTTTTGTGTTAGC+TGG + chr8_4:8183654-8183673 None:intergenic 35.0%
! TATCAACACCATAGTGTTGA+AGG + chr8_4:8183899-8183918 None:intergenic 35.0%
!! CAACACTATGGTGTTGATAT+TGG - chr8_4:8183900-8183919 Msa1311400:intron 35.0%
AAATGTTAGCAAGAAAGAGG+AGG - chr8_4:8183935-8183954 Msa1311400:intron 35.0%
GAAAGAGGAGGTAATGTTTA+TGG - chr8_4:8183947-8183966 Msa1311400:intron 35.0%
ATAATCTCTGCAATTACAGG+AGG - chr8_4:8184419-8184438 Msa1311400:intron 35.0%
! CTCTAATTTTCTCTGCACAT+GGG + chr8_4:8184478-8184497 None:intergenic 35.0%
AAGAAACTCCAGAAGAAGAA+GGG - chr8_4:8184730-8184749 Msa1311400:intron 35.0%
CGAAGATTTCGATATTCCTG+CGG - chr8_4:8170104-8170123 Msa1311400:three_prime_UTR 40.0%
AAAGTCGAAATCGTCGTTCA+TGG + chr8_4:8170136-8170155 None:intergenic 40.0%
CTTGAGAATTGGATTATCGC+CGG + chr8_4:8170166-8170185 None:intergenic 40.0%
GAAAAGGAAATCGGAAAGCA+AGG - chr8_4:8170195-8170214 Msa1311400:three_prime_UTR 40.0%
AAGCTTCTCAAAGAAGGTGA+AGG - chr8_4:8170228-8170247 Msa1311400:three_prime_UTR 40.0%
TTCTCAAAGAAGGTGAAGGT+TGG - chr8_4:8170232-8170251 Msa1311400:three_prime_UTR 40.0%
TCTCAAAGAAGGTGAAGGTT+GGG - chr8_4:8170233-8170252 Msa1311400:three_prime_UTR 40.0%
TATACTGGAACGTTGCTTGA+TGG - chr8_4:8170389-8170408 Msa1311400:exon 40.0%
CACCAAACACAACATTGACA+CGG + chr8_4:8170848-8170867 None:intergenic 40.0%
CAGGGCAAGTTATTAAAGGA+TGG - chr8_4:8171214-8171233 Msa1311400:CDS 40.0%
ATAAGCTAACTCAGGTGGAA+TGG + chr8_4:8171286-8171305 None:intergenic 40.0%
! ATTCCACCTGAGTTAGCTTA+TGG - chr8_4:8171285-8171304 Msa1311400:intron 40.0%
GATTCACCATAAGCTAACTC+AGG + chr8_4:8171294-8171313 None:intergenic 40.0%
! GAGTTAGCTTATGGTGAATC+TGG - chr8_4:8171294-8171313 Msa1311400:intron 40.0%
GTAGCATTAGGAGGAATAGT+TGG + chr8_4:8171327-8171346 None:intergenic 40.0%
AATTGCAGAGTAGCATTAGG+AGG + chr8_4:8171336-8171355 None:intergenic 40.0%
TAGTTAAGGAGGGGGAAAAA+TGG - chr8_4:8171424-8171443 Msa1311400:CDS 40.0%
AGTTAAGGAGGGGGAAAAAT+GGG - chr8_4:8171425-8171444 Msa1311400:CDS 40.0%
CATAATGTTCACCATGAGAC+AGG - chr8_4:8171713-8171732 Msa1311400:intron 40.0%
TTAACAGCCTTTGACAATGC+AGG + chr8_4:8171749-8171768 None:intergenic 40.0%
GGCTGTTAAGACTATGAAGA+AGG - chr8_4:8171760-8171779 Msa1311400:intron 40.0%
ACATTTCCCATAGTGTTGTG+TGG + chr8_4:8171828-8171847 None:intergenic 40.0%
AGTTCCACCTAATGCAACAT+TGG - chr8_4:8171968-8171987 Msa1311400:intron 40.0%
ATCTCCAATGTTGCATTAGG+TGG + chr8_4:8171975-8171994 None:intergenic 40.0%
CGAAGTAACTGATGACAAGA+AGG - chr8_4:8172028-8172047 Msa1311400:intron 40.0%
AAGATTGTCAAGGAAGGAGA+AGG - chr8_4:8172059-8172078 Msa1311400:intron 40.0%
CACTGCAAAGATGCAAAATG+AGG + chr8_4:8172201-8172220 None:intergenic 40.0%
CTAACTGGTAAGTTGCAAGA+TGG - chr8_4:8172224-8172243 Msa1311400:intron 40.0%
!! GTATTTTTGAAGAAGGGCCA+TGG - chr8_4:8172251-8172270 Msa1311400:intron 40.0%
AGCTGTAATGACCATGAAGA+AGG - chr8_4:8172430-8172449 Msa1311400:intron 40.0%
GCTGTAATGACCATGAAGAA+GGG - chr8_4:8172431-8172450 Msa1311400:intron 40.0%
! GATGAACCAAAAGCATACTC+GGG + chr8_4:8172482-8172501 None:intergenic 40.0%
! GGATGAACCAAAAGCATACT+CGG + chr8_4:8172483-8172502 None:intergenic 40.0%
CATCAGACTTGGAAATAGCA+GGG + chr8_4:8172751-8172770 None:intergenic 40.0%
ACATCAGACTTGGAAATAGC+AGG + chr8_4:8172752-8172771 None:intergenic 40.0%
ACAAGACTTCCATGCTAAGA+TGG + chr8_4:8172887-8172906 None:intergenic 40.0%
!! GCATGGAAGTCTTGTTAATC+TGG - chr8_4:8172892-8172911 Msa1311400:intron 40.0%
AGAATGTCCAGAAAACACTG+AGG + chr8_4:8173105-8173124 None:intergenic 40.0%
ATACACAAAGCTGGGAGTTA+GGG + chr8_4:8173164-8173183 None:intergenic 40.0%
ATCAGTGCATACACAAAGCT+GGG + chr8_4:8173172-8173191 None:intergenic 40.0%
TATCAGTGCATACACAAAGC+TGG + chr8_4:8173173-8173192 None:intergenic 40.0%
!! TGCTTTAGGATAAGGAGTCA+TGG - chr8_4:8173207-8173226 Msa1311400:intron 40.0%
!! GCTTTAGGATAAGGAGTCAT+GGG - chr8_4:8173208-8173227 Msa1311400:intron 40.0%
TTACACTGAAACCCTAATGC+AGG - chr8_4:8173403-8173422 Msa1311400:intron 40.0%
GAATTTCACAGCCTGCATTA+GGG + chr8_4:8173417-8173436 None:intergenic 40.0%
TGAATTTCACAGCCTGCATT+AGG + chr8_4:8173418-8173437 None:intergenic 40.0%
TTTCTTCTGCTCTTCGGTAT+AGG + chr8_4:8173456-8173475 None:intergenic 40.0%
!! ACAAGCAATTTTCAAGGCCT+TGG + chr8_4:8173483-8173502 None:intergenic 40.0%
GCAGTGATATCCTACAAGAT+GGG + chr8_4:8173590-8173609 None:intergenic 40.0%
AGCAGTGATATCCTACAAGA+TGG + chr8_4:8173591-8173610 None:intergenic 40.0%
TTACATGGATAAACAGGTGC+TGG - chr8_4:8173637-8173656 Msa1311400:intron 40.0%
! GCTTGAGAGCACAAATGTTA+AGG - chr8_4:8173661-8173680 Msa1311400:intron 40.0%
ATGTTAAGGCCCTCTATAGA+AGG - chr8_4:8173675-8173694 Msa1311400:intron 40.0%
TGTTAAGGCCCTCTATAGAA+GGG - chr8_4:8173676-8173695 Msa1311400:intron 40.0%
TTGAGATTGACCCTAACAAC+AGG - chr8_4:8173759-8173778 Msa1311400:intron 40.0%
!!! AATGCTTTTTCGCTTCTGGA+TGG - chr8_4:8174047-8174066 Msa1311400:intron 40.0%
!! AGTATTGACAGCAAGGCATA+GGG - chr8_4:8174184-8174203 Msa1311400:intron 40.0%
!! GTTTTCTGGTGTACTATCTG+AGG - chr8_4:8174485-8174504 Msa1311400:intron 40.0%
! TTTCTGGTGTACTATCTGAG+GGG - chr8_4:8174487-8174506 Msa1311400:intron 40.0%
CGGAAATTATAGTGTCCACT+TGG - chr8_4:8174510-8174529 Msa1311400:intron 40.0%
TGAATACCACTTTCTCCAAG+TGG + chr8_4:8174528-8174547 None:intergenic 40.0%
GGATTAACGCTTGAATATGC+AGG - chr8_4:8174550-8174569 Msa1311400:intron 40.0%
!! GGAAATAACGGGCAATACAA+AGG + chr8_4:8174593-8174612 None:intergenic 40.0%
TTCACGATTCATAGTGCTTG+TGG + chr8_4:8174751-8174770 None:intergenic 40.0%
CTCAAAATATCGGTCACGTT+TGG - chr8_4:8174796-8174815 Msa1311400:intron 40.0%
GAGGAGATAATAAGCCTACT+TGG + chr8_4:8174856-8174875 None:intergenic 40.0%
CTATAGAAGAATCTGAGAGG+AGG - chr8_4:8174954-8174973 Msa1311400:intron 40.0%
AGGGTATGTGACAATATGTG+TGG - chr8_4:8174974-8174993 Msa1311400:intron 40.0%
AAAAGAAATCTACCTGCAGG+TGG + chr8_4:8175026-8175045 None:intergenic 40.0%
ATTTAGCCAAACCTTAGGGT+AGG + chr8_4:8175544-8175563 None:intergenic 40.0%
!! GTGTCATTTAGCCAAACCTT+AGG + chr8_4:8175549-8175568 None:intergenic 40.0%
AATGGAGTCAAATAGAAGGG+AGG + chr8_4:8175604-8175623 None:intergenic 40.0%
! AGAAGAAGCATAGATAGCCA+TGG - chr8_4:8175643-8175662 Msa1311400:intron 40.0%
AGGCTTAATTGATTGCAGCA+AGG + chr8_4:8175692-8175711 None:intergenic 40.0%
! GTTGCCATCGATGAAGTATT+TGG + chr8_4:8175761-8175780 None:intergenic 40.0%
AATACTTCATCGATGGCAAC+AGG - chr8_4:8175761-8175780 Msa1311400:CDS 40.0%
TGAGAATGAATATCAGGGCA+AGG + chr8_4:8175892-8175911 None:intergenic 40.0%
TAATAAATCCCTAGCTGGGT+TGG + chr8_4:8176014-8176033 None:intergenic 40.0%
GCATTAGAATCATAGAAGGC+AGG + chr8_4:8176113-8176132 None:intergenic 40.0%
TTCCAGCTGCAACATTCTTA+GGG + chr8_4:8176532-8176551 None:intergenic 40.0%
! GCATATTCACGACTTTTGCT+GGG - chr8_4:8176770-8176789 Msa1311400:intron 40.0%
!! TGCATGCATTTTCTCTAGAG+TGG - chr8_4:8176830-8176849 Msa1311400:intron 40.0%
!!! GCATGCATTTTCTCTAGAGT+GGG - chr8_4:8176831-8176850 Msa1311400:intron 40.0%
ATGAGATAACTGCACATCAC+AGG - chr8_4:8176859-8176878 Msa1311400:intron 40.0%
TGTAGAGGTTAAGCAACATG+GGG + chr8_4:8177565-8177584 None:intergenic 40.0%
GAGGCTTATGAGCAAATAAG+AGG - chr8_4:8177685-8177704 Msa1311400:intron 40.0%
GGATGTTTGTGAATGAAGGA+GGG + chr8_4:8177940-8177959 None:intergenic 40.0%
AGGATGTTTGTGAATGAAGG+AGG + chr8_4:8177941-8177960 None:intergenic 40.0%
AATCAGGCATTTCCAGAGAT+AGG - chr8_4:8178063-8178082 Msa1311400:intron 40.0%
GTGGAATTTGCGGTTCTTAA+TGG - chr8_4:8178305-8178324 Msa1311400:intron 40.0%
!!! TCTGCTAAAGCACTGGTTTT+AGG - chr8_4:8178365-8178384 Msa1311400:intron 40.0%
CTTCATGAAGGATTCCATTC+AGG + chr8_4:8178463-8178482 None:intergenic 40.0%
CTGTGACATTTGTGTGTGTA+TGG - chr8_4:8178491-8178510 Msa1311400:intron 40.0%
TTTCTCACAAAGGCCATTGT+TGG - chr8_4:8179007-8179026 Msa1311400:intron 40.0%
!! AGAGCTTTGAGATTGGATAC+TGG - chr8_4:8179366-8179385 Msa1311400:intron 40.0%
TGGATACTGGAAACATCTCA+TGG - chr8_4:8179379-8179398 Msa1311400:intron 40.0%
GGATACTGGAAACATCTCAT+GGG - chr8_4:8179380-8179399 Msa1311400:intron 40.0%
GATACTGGAAACATCTCATG+GGG - chr8_4:8179381-8179400 Msa1311400:intron 40.0%
! GAAAACCCGTTTGCTAAATG+TGG - chr8_4:8179422-8179441 Msa1311400:intron 40.0%
!! TTTGGTGCCTAGATTGTCAT+TGG - chr8_4:8179767-8179786 Msa1311400:intron 40.0%
GTACTTGCCAATGACAATCT+AGG + chr8_4:8179777-8179796 None:intergenic 40.0%
CTACTATACAAGGAGAATGC+AGG + chr8_4:8179923-8179942 None:intergenic 40.0%
GCAACATCAGCTACTATACA+AGG + chr8_4:8179933-8179952 None:intergenic 40.0%
! CAGCACATGGTTACTCTTTT+TGG + chr8_4:8180006-8180025 None:intergenic 40.0%
AAAAGAGTAACCATGTGCTG+AGG - chr8_4:8180006-8180025 Msa1311400:intron 40.0%
TAACCATGTGCTGAGGAAAT+TGG - chr8_4:8180013-8180032 Msa1311400:intron 40.0%
ACCAAACTGCTCTTCAATGT+GGG + chr8_4:8180069-8180088 None:intergenic 40.0%
! TGGATTATGCAGCTACGTTT+TGG - chr8_4:8180228-8180247 Msa1311400:intron 40.0%
!! TTATGCAGCTACGTTTTGGA+AGG - chr8_4:8180232-8180251 Msa1311400:intron 40.0%
TCTACATGAAGAAACTGCAG+AGG - chr8_4:8180269-8180288 Msa1311400:intron 40.0%
AAGAAACTGCAGAGGAAGAA+GGG - chr8_4:8180277-8180296 Msa1311400:intron 40.0%
! GCCCATTGTCTCTTGATTTT+TGG - chr8_4:8180405-8180424 Msa1311400:intron 40.0%
CATGAAGGATTCCACTTTCA+TGG + chr8_4:8180481-8180500 None:intergenic 40.0%
CATGAAAGTGGAATCCTTCA+TGG - chr8_4:8180479-8180498 Msa1311400:intron 40.0%
!!! TTTTTTGTGTGGACGGCTTT+TGG - chr8_4:8180522-8180541 Msa1311400:intron 40.0%
TTCCCGCTCATTTGCAAATT+AGG - chr8_4:8180698-8180717 Msa1311400:intron 40.0%
GCAAATGAGCGGGAAAAATT+AGG + chr8_4:8180885-8180904 None:intergenic 40.0%
TTCTTTACAGTAAACCCGAG+CGG - chr8_4:8181438-8181457 Msa1311400:intron 40.0%
!!! AATGTTTTTTTGGTGGTGGC+TGG - chr8_4:8182150-8182169 Msa1311400:intron 40.0%
!!! ATGTTTTTTTGGTGGTGGCT+GGG - chr8_4:8182151-8182170 Msa1311400:intron 40.0%
GTTTAACATTCTGCTTGAGC+CGG - chr8_4:8182551-8182570 Msa1311400:intron 40.0%
TGTACCCATCTTGAAGAAAC+TGG + chr8_4:8182612-8182631 None:intergenic 40.0%
AAATCTTCGTACCCCATTTC+AGG + chr8_4:8183202-8183221 None:intergenic 40.0%
!!! ATAGTTTTGTGTTAGCTGGC+TGG + chr8_4:8183650-8183669 None:intergenic 40.0%
TATCAAGCAACAAGACAGTG+AGG - chr8_4:8183667-8183686 Msa1311400:intron 40.0%
TTAGAGGTGGAAATGTGAAG+TGG - chr8_4:8183700-8183719 Msa1311400:intron 40.0%
!! AGAGCTTTGAGATTGGATAC+CGG - chr8_4:8179366-8179385 Msa1311400:intron 40.0%
TGTAAACCACATCGAGCAAA+CGG + chr8_4:8183788-8183807 None:intergenic 40.0%
CAATGCTTCCAACAATGAGT+TGG - chr8_4:8183806-8183825 Msa1311400:intron 40.0%
!! TGTGAAGAGTGCTATTGTTC+AGG - chr8_4:8183845-8183864 Msa1311400:intron 40.0%
!! TGAAGGTACCATTGCTTGAA+GGG + chr8_4:8183882-8183901 None:intergenic 40.0%
!! TTGAAGGTACCATTGCTTGA+AGG + chr8_4:8183883-8183902 None:intergenic 40.0%
CAATGGTACCTTCAACACTA+TGG - chr8_4:8183888-8183907 Msa1311400:intron 40.0%
! GCTCTAATTTTCTCTGCACA+TGG + chr8_4:8184479-8184498 None:intergenic 40.0%
AGAATGTAGCTGCGTATTCA+AGG + chr8_4:8184682-8184701 None:intergenic 40.0%
ATACGCAGCTACATTCTTGA+AGG - chr8_4:8184685-8184704 Msa1311400:intron 40.0%
CAGCTACATTCTTGAAGGTA+AGG - chr8_4:8184690-8184709 Msa1311400:intron 40.0%
GAAGAAACTCCAGAAGAAGA+AGG - chr8_4:8184729-8184748 Msa1311400:intron 40.0%
GCACAAAACATCTCTTTGCT+CGG + chr8_4:8184826-8184845 None:intergenic 40.0%
!! TCATAGTACTGACCACTATC+AGG - chr8_4:8184999-8185018 Msa1311400:CDS 40.0%
CGGCGATAATCCAATTCTCA+AGG - chr8_4:8170164-8170183 Msa1311400:three_prime_UTR 45.0%
GTCGGTGAGGAAAAGGAAAT+CGG - chr8_4:8170186-8170205 Msa1311400:three_prime_UTR 45.0%
CTTGGACAAGGTTAGTGCAT+TGG - chr8_4:8170461-8170480 Msa1311400:intron 45.0%
AGGTTAGTGCATTGGAACGA+CGG - chr8_4:8170469-8170488 Msa1311400:intron 45.0%
!! TCACAAGCACTGGTGTGATA+AGG + chr8_4:8170598-8170617 None:intergenic 45.0%
! TGCAATCATATGTGCTGGCA+CGG + chr8_4:8170790-8170809 None:intergenic 45.0%
GTCCGTGTCAATGTTGTGTT+TGG - chr8_4:8170843-8170862 Msa1311400:intron 45.0%
!! GTTGTGTTTGGTGTCTGTGT+CGG - chr8_4:8170855-8170874 Msa1311400:intron 45.0%
ACTGCGATCAGATACTACGA+AGG + chr8_4:8170982-8171001 None:intergenic 45.0%
TCACCATAAGCTAACTCAGG+TGG + chr8_4:8171291-8171310 None:intergenic 45.0%
GCATTAGGAGGAATAGTTGG+AGG + chr8_4:8171324-8171343 None:intergenic 45.0%
TTGATGTTGAGCTGCTGTCT+TGG - chr8_4:8171355-8171374 Msa1311400:CDS 45.0%
GGAAAAATGGGAAAACCCCA+AGG - chr8_4:8171437-8171456 Msa1311400:CDS 45.0%
TATGAAGCGCGTCTTGATGA+TGG - chr8_4:8171574-8171593 Msa1311400:intron 45.0%
TGAAGTGGAGTTCACAGTGA+AGG - chr8_4:8171618-8171637 Msa1311400:intron 45.0%
! AAACCAGCTCATGGTGATGA+AGG - chr8_4:8171942-8171961 Msa1311400:intron 45.0%
GGATATGAGCGTCCAAATGA+TGG - chr8_4:8172080-8172099 Msa1311400:intron 45.0%
TGAGCAGAGCAAGTGATTGA+CGG - chr8_4:8172398-8172417 Msa1311400:CDS 45.0%
AATGACCATGAAGAAGGGTG+AGG - chr8_4:8172436-8172455 Msa1311400:intron 45.0%
! ATTGCACCCGAGTATGCTTT+TGG - chr8_4:8172473-8172492 Msa1311400:intron 45.0%
GTTTCCTTGCCATCTTAGCA+TGG - chr8_4:8172875-8172894 Msa1311400:intron 45.0%
ACTTCCATGCTAAGATGGCA+AGG + chr8_4:8172882-8172901 None:intergenic 45.0%
!!! TAACTGTGCTTTTAGGGCTC+TGG - chr8_4:8172953-8172972 Msa1311400:intron 45.0%
TACACAAAGCTGGGAGTTAG+GGG + chr8_4:8173163-8173182 None:intergenic 45.0%
CATACACAAAGCTGGGAGTT+AGG + chr8_4:8173165-8173184 None:intergenic 45.0%
CGGGCAAGAAGAAAGAAGAA+GGG - chr8_4:8173261-8173280 Msa1311400:intron 45.0%
! GGCACTTTTCTTCTGCTCTT+CGG + chr8_4:8173462-8173481 None:intergenic 45.0%
!! AGAGCAGAAGAAAAGTGCCA+AGG - chr8_4:8173463-8173482 Msa1311400:intron 45.0%
GGCAGAGAAATTGTGTACGA+AGG - chr8_4:8173550-8173569 Msa1311400:intron 45.0%
CTTGATGTGTCCCATCTTGT+AGG - chr8_4:8173577-8173596 Msa1311400:intron 45.0%
CCAAATCAAAGTCAGCCAAC+TGG + chr8_4:8173715-8173734 None:intergenic 45.0%
! CCAGTTGGCTGACTTTGATT+TGG - chr8_4:8173712-8173731 Msa1311400:intron 45.0%
TTGAACCAGGGATGTGAAGT+TGG - chr8_4:8173892-8173911 Msa1311400:intron 45.0%
!! ACCCATGAGTATTGACAGCA+AGG - chr8_4:8174177-8174196 Msa1311400:intron 45.0%
! GCCTTGCTGTCAATACTCAT+GGG + chr8_4:8174181-8174200 None:intergenic 45.0%
! TGCCTTGCTGTCAATACTCA+TGG + chr8_4:8174182-8174201 None:intergenic 45.0%
!! GAGTATTGACAGCAAGGCAT+AGG - chr8_4:8174183-8174202 Msa1311400:intron 45.0%
TAGTGTCCACTTGGAGAAAG+TGG - chr8_4:8174519-8174538 Msa1311400:intron 45.0%
AGGCAAGCATGGGAAATAAC+GGG + chr8_4:8174604-8174623 None:intergenic 45.0%
GAGGCAAGCATGGGAAATAA+CGG + chr8_4:8174605-8174624 None:intergenic 45.0%
ATTTCCCATGCTTGCCTCAT+TGG - chr8_4:8174607-8174626 Msa1311400:intron 45.0%
CAATGACCTACCCTAAGGTT+TGG - chr8_4:8175535-8175554 Msa1311400:intron 45.0%
GGCTATCTATGCTTCTTCTC+TGG + chr8_4:8175642-8175661 None:intergenic 45.0%
! ACGGTGTTAAAAGAGAAGGG+AGG - chr8_4:8176182-8176201 Msa1311400:intron 45.0%
TAAAGAAAACTCAGGGGAGG+TGG - chr8_4:8176278-8176297 Msa1311400:intron 45.0%
AAAGAAAACTCAGGGGAGGT+GGG - chr8_4:8176279-8176298 Msa1311400:intron 45.0%
TCAATCATTTCCAGGTGCAC+AGG - chr8_4:8176431-8176450 Msa1311400:intron 45.0%
CAATCATTTCCAGGTGCACA+GGG - chr8_4:8176432-8176451 Msa1311400:intron 45.0%
GTTCCAGCTGCAACATTCTT+AGG + chr8_4:8176533-8176552 None:intergenic 45.0%
AAGAATGTTGCAGCTGGAAC+TGG - chr8_4:8176533-8176552 Msa1311400:intron 45.0%
! GAAAGTACATGTGCAAGCTG+AGG + chr8_4:8176570-8176589 None:intergenic 45.0%
! GGCATATTCACGACTTTTGC+TGG - chr8_4:8176769-8176788 Msa1311400:intron 45.0%
TGTGAAATGCATGCATGGAG+CGG - chr8_4:8177813-8177832 Msa1311400:intron 45.0%
! CCTTTTTGTCCTCCTATCTC+TGG + chr8_4:8178078-8178097 None:intergenic 45.0%
CCAGAGATAGGAGGACAAAA+AGG - chr8_4:8178075-8178094 Msa1311400:intron 45.0%
AACTACTGTCTACCTCTACG+CGG + chr8_4:8178346-8178365 None:intergenic 45.0%
! CAGTAGTTCTGCTAAAGCAC+TGG - chr8_4:8178358-8178377 Msa1311400:intron 45.0%
! GAGTGCCAATTCTCGGTTTT+TGG - chr8_4:8178572-8178591 Msa1311400:intron 45.0%
!! CTTGATAGCTTGGTGTTAGC+TGG + chr8_4:8179297-8179316 None:intergenic 45.0%
!! GTGAGGAGTATTCGTGTTAG+AGG - chr8_4:8179327-8179346 Msa1311400:intron 45.0%
!! AGGAGTATTCGTGTTAGAGG+TGG - chr8_4:8179330-8179349 Msa1311400:intron 45.0%
AGTTCGCACAAGCTCATTGT+TGG + chr8_4:8179460-8179479 None:intergenic 45.0%
!! TGAAGGTACCACTGCTTGAA+TGG + chr8_4:8179525-8179544 None:intergenic 45.0%
CAGTGGTACCTTCAACACTA+TGG - chr8_4:8179531-8179550 Msa1311400:intron 45.0%
GGAGAATGCAGGACGTAATT+TGG + chr8_4:8179912-8179931 None:intergenic 45.0%
TCTCCAATTTCCTCAGCACA+TGG + chr8_4:8180019-8180038 None:intergenic 45.0%
CACCAAACTGCTCTTCAATG+TGG + chr8_4:8180070-8180089 None:intergenic 45.0%
CACATTGAAGAGCAGTTTGG+TGG - chr8_4:8180068-8180087 Msa1311400:intron 45.0%
! ATTGAAGAGCAGTTTGGTGG+TGG - chr8_4:8180071-8180090 Msa1311400:intron 45.0%
! TTGAAGAGCAGTTTGGTGGT+GGG - chr8_4:8180072-8180091 Msa1311400:intron 45.0%
!!! CAGCTACGTTTTGGAAGGTA+AGG - chr8_4:8180237-8180256 Msa1311400:intron 45.0%
!!! CGTTTTGGAAGGTAAGGAGT+TGG - chr8_4:8180243-8180262 Msa1311400:intron 45.0%
GAAGAAACTGCAGAGGAAGA+AGG - chr8_4:8180276-8180295 Msa1311400:intron 45.0%
! TTGGCGCTTTTCCATGAAAG+TGG - chr8_4:8180467-8180486 Msa1311400:intron 45.0%
! TGTGGACGGCTTTTGGATTA+TGG - chr8_4:8180529-8180548 Msa1311400:intron 45.0%
ATCCAGAGAAGATCCAGAGA+AGG - chr8_4:8181135-8181154 Msa1311400:intron 45.0%
!!! TGTTTTTTTGGTGGTGGCTG+GGG - chr8_4:8182152-8182171 Msa1311400:intron 45.0%
GGTCTTCATATTCACTGACC+CGG + chr8_4:8182490-8182509 None:intergenic 45.0%
ATGCACAAGAGACGTGAAAC+TGG - chr8_4:8182755-8182774 Msa1311400:intron 45.0%
GACATTCATGTGCGAAGCAT+AGG + chr8_4:8183526-8183545 None:intergenic 45.0%
TCGCACATGAATGTCTGAAC+TGG - chr8_4:8183531-8183550 Msa1311400:intron 45.0%
CGCACATGAATGTCTGAACT+GGG - chr8_4:8183532-8183551 Msa1311400:intron 45.0%
GCACATGAATGTCTGAACTG+GGG - chr8_4:8183533-8183552 Msa1311400:intron 45.0%
GTTTCATCTAGGTACGAGCT+CGG - chr8_4:8183621-8183640 Msa1311400:intron 45.0%
!! GAAGTGGAGAGCTTTGAGAT+TGG - chr8_4:8183716-8183735 Msa1311400:intron 45.0%
TGGATACCGGTAACTTCTCA+TGG - chr8_4:8183736-8183755 Msa1311400:intron 45.0%
GGATACCGGTAACTTCTCAT+GGG - chr8_4:8183737-8183756 Msa1311400:intron 45.0%
GATACCGGTAACTTCTCATG+GGG - chr8_4:8183738-8183757 Msa1311400:intron 45.0%
ACTTCCCCATGAGAAGTTAC+CGG + chr8_4:8183745-8183764 None:intergenic 45.0%
GTAAACCACATCGAGCAAAC+GGG + chr8_4:8183787-8183806 None:intergenic 45.0%
AGTTCGCACCAACTCATTGT+TGG + chr8_4:8183817-8183836 None:intergenic 45.0%
ACCAAACTGCTCCTCAATGT+GGG + chr8_4:8184529-8184548 None:intergenic 45.0%
AACATCTCTTTGCTCGGTAC+TGG + chr8_4:8184820-8184839 None:intergenic 45.0%
TGAAAGTGAGTGCCTGATAG+TGG + chr8_4:8185014-8185033 None:intergenic 45.0%
!!! TATTTTTTTAGATAAAAAAA+AGG + chr8_4:8175399-8175418 None:intergenic 5.0%
!!! TATTTTATTAGTTTATATTT+GGG - chr8_4:8176642-8176661 Msa1311400:intron 5.0%
!!! AATTTTACAAATTTAAATTT+TGG - chr8_4:8176998-8177017 Msa1311400:intron 5.0%
!!! ATTTTACAAATTTAAATTTT+GGG - chr8_4:8176999-8177018 Msa1311400:intron 5.0%
!!! TATGAATATTAAAATATTTT+GGG - chr8_4:8177058-8177077 Msa1311400:CDS 5.0%
!!! ATTTTTAAAAAAAAAAAAAC+AGG - chr8_4:8177169-8177188 Msa1311400:intron 5.0%
!!! TTTTTAAAAAAAAAAAAACA+GGG - chr8_4:8177170-8177189 Msa1311400:intron 5.0%
!! TTTATATAAATTATATTGTT+TGG + chr8_4:8177449-8177468 None:intergenic 5.0%
!! AAATTATAAGAATTAAAATT+AGG + chr8_4:8179187-8179206 None:intergenic 5.0%
!!! TTTTAATTCTTATAATTTAT+TGG - chr8_4:8179189-8179208 Msa1311400:intron 5.0%
!! AAATATTATAAAAGAAAATT+CGG + chr8_4:8181312-8181331 None:intergenic 5.0%
!!! ATTTTCTTTTATAATATTTT+CGG - chr8_4:8181313-8181332 Msa1311400:intron 5.0%
!!! TTTTATATATATAATGAAAT+TGG - chr8_4:8182840-8182859 Msa1311400:intron 5.0%
!!! TTTTATTTTATTTTCTTATA+AGG - chr8_4:8183251-8183270 Msa1311400:intron 5.0%
TCGTTCATGGAATCAACCGC+AGG + chr8_4:8170123-8170142 None:intergenic 50.0%
GAGAATTGGATTATCGCCGG+CGG + chr8_4:8170163-8170182 None:intergenic 50.0%
TCCAATTCTCAAGGTCGGTG+AGG - chr8_4:8170173-8170192 Msa1311400:three_prime_UTR 50.0%
TCCTCACCGACCTTGAGAAT+TGG + chr8_4:8170177-8170196 None:intergenic 50.0%
TCTCAAGGTCGGTGAGGAAA+AGG - chr8_4:8170179-8170198 Msa1311400:three_prime_UTR 50.0%
GGTTGGGATACTCCTGATGT+TGG - chr8_4:8170249-8170268 Msa1311400:three_prime_UTR 50.0%
TGAACTTCGTCGCCAACATC+AGG + chr8_4:8170264-8170283 None:intergenic 50.0%
GATGTTGGCGACGAAGTTCA+CGG - chr8_4:8170264-8170283 Msa1311400:three_prime_UTR 50.0%
GGTTAGTGCATTGGAACGAC+GGG - chr8_4:8170470-8170489 Msa1311400:intron 50.0%
GTTAGTGCATTGGAACGACG+GGG - chr8_4:8170471-8170490 Msa1311400:intron 50.0%
! GCAATCATATGTGCTGGCAC+GGG + chr8_4:8170789-8170808 None:intergenic 50.0%
CACAACATTGACACGGACAC+TGG + chr8_4:8170841-8170860 None:intergenic 50.0%
!! GCTGTCTTGGACTAGTGTGA+AGG - chr8_4:8171368-8171387 Msa1311400:CDS 50.0%
AGTGGAGTTCACAGTGAAGG+AGG - chr8_4:8171621-8171640 Msa1311400:intron 50.0%
GTGGAGTTCACAGTGAAGGA+GGG - chr8_4:8171622-8171641 Msa1311400:intron 50.0%
GAGAAAGGCAAACCAGCTCA+TGG - chr8_4:8171933-8171952 Msa1311400:intron 50.0%
GAGCAGAGCAAGTGATTGAC+GGG - chr8_4:8172399-8172418 Msa1311400:CDS 50.0%
TGCTACCTCACCCTTCTTCA+TGG + chr8_4:8172444-8172463 None:intergenic 50.0%
ATCCGAGTCTCAGCAGGAAT+TGG - chr8_4:8172499-8172518 Msa1311400:intron 50.0%
TGCCAATTCCTGCTGAGACT+CGG + chr8_4:8172504-8172523 None:intergenic 50.0%
GAGTCATGGGACATGACAAC+TGG - chr8_4:8173221-8173240 Msa1311400:intron 50.0%
GGACATGACAACTGGAGAGA+AGG - chr8_4:8173229-8173248 Msa1311400:intron 50.0%
TGGAGAGAAGGTAGAAGCTG+CGG - chr8_4:8173241-8173260 Msa1311400:intron 50.0%
GCGGGCAAGAAGAAAGAAGA+AGG - chr8_4:8173260-8173279 Msa1311400:intron 50.0%
TGCCTGAGCCCTTCTATAGA+GGG + chr8_4:8173687-8173706 None:intergenic 50.0%
ATGCCTGAGCCCTTCTATAG+AGG + chr8_4:8173688-8173707 None:intergenic 50.0%
GGCTCAGGCATATATCCAGT+TGG - chr8_4:8173697-8173716 Msa1311400:intron 50.0%
GTACTCCAACTTCACATCCC+TGG + chr8_4:8173900-8173919 None:intergenic 50.0%
CATGCAGAAATCTGCGCCAA+AGG - chr8_4:8174147-8174166 Msa1311400:intron 50.0%
CTCATGGGTTCAGCATCCTT+TGG + chr8_4:8174166-8174185 None:intergenic 50.0%
CACTCCAATGAGGCAAGCAT+GGG + chr8_4:8174614-8174633 None:intergenic 50.0%
ACACTCCAATGAGGCAAGCA+TGG + chr8_4:8174615-8174634 None:intergenic 50.0%
TGCTTGCCTCATTGGAGTGT+TGG - chr8_4:8174615-8174634 Msa1311400:intron 50.0%
TAGTGCTTGTGGCACGACAA+GGG + chr8_4:8174740-8174759 None:intergenic 50.0%
ATAGTGCTTGTGGCACGACA+AGG + chr8_4:8174741-8174760 None:intergenic 50.0%
AGAAGCTTCCAACCCAGCTA+GGG - chr8_4:8176003-8176022 Msa1311400:intron 50.0%
TCACACAACATGCTCTTGCG+TGG - chr8_4:8176478-8176497 Msa1311400:intron 50.0%
CATTCTTAGGGCATGCGCAT+GGG + chr8_4:8176520-8176539 None:intergenic 50.0%
ACATTCTTAGGGCATGCGCA+TGG + chr8_4:8176521-8176540 None:intergenic 50.0%
TGCCCTAAGAATGTTGCAGC+TGG - chr8_4:8176527-8176546 Msa1311400:intron 50.0%
GTTAAGCAACATGGGGTCCA+TGG + chr8_4:8177558-8177577 None:intergenic 50.0%
CAGGCATTTCCAGAGATAGG+AGG - chr8_4:8178066-8178085 Msa1311400:intron 50.0%
ATCGTTTGGTCGTCCCTGAA+TGG - chr8_4:8178446-8178465 Msa1311400:intron 50.0%
TGTGTATGGGTCGCTCGTTA+TGG - chr8_4:8178505-8178524 Msa1311400:intron 50.0%
!! ATAGCTTGGTGTTAGCTGGC+TGG + chr8_4:8179293-8179312 None:intergenic 50.0%
!! TGTTAAGAGCGCTATCGTGC+AGG - chr8_4:8179488-8179507 Msa1311400:intron 50.0%
ATGCTGCTCCATTCAAGCAG+TGG - chr8_4:8179514-8179533 Msa1311400:intron 50.0%
TGCCAAAAAGGACTCTGCAC+AGG - chr8_4:8179584-8179603 Msa1311400:intron 50.0%
! CACCTGTGCAGAGTCCTTTT+TGG + chr8_4:8179589-8179608 None:intergenic 50.0%
GCCCACATTGAAGAGCAGTT+TGG - chr8_4:8180065-8180084 Msa1311400:intron 50.0%
GCATGCATTTCTTCTCGACC+TGG - chr8_4:8180104-8180123 Msa1311400:intron 50.0%
TCTTCTCGACCTGGTCAATG+TGG - chr8_4:8180113-8180132 Msa1311400:intron 50.0%
GTCCTTCTCTGGATCTTCTC+TGG + chr8_4:8181140-8181159 None:intergenic 50.0%
!! TTTTTGACTCGTGCTCCGCT+CGG + chr8_4:8181456-8181475 None:intergenic 50.0%
CACAAGAGACGTGAAACTGG+TGG - chr8_4:8182758-8182777 Msa1311400:intron 50.0%
CTGGTGGCAAGAAGAAAGCA+TGG - chr8_4:8182774-8182793 Msa1311400:intron 50.0%
! GTGGCAAGAAGAAAGCATGG+AGG - chr8_4:8182777-8182796 Msa1311400:intron 50.0%
CAAGCAACAAGACAGTGAGG+AGG - chr8_4:8183670-8183689 Msa1311400:intron 50.0%
GTGAGGAGGATTCGTGTTAG+AGG - chr8_4:8183684-8183703 Msa1311400:intron 50.0%
AGGAGGATTCGTGTTAGAGG+TGG - chr8_4:8183687-8183706 Msa1311400:intron 50.0%
CAAAACCCGTTTGCTCGATG+TGG - chr8_4:8183779-8183798 Msa1311400:intron 50.0%
ATGCTGCTCCCTTCAAGCAA+TGG - chr8_4:8183871-8183890 Msa1311400:intron 50.0%
TCTGCAATTACAGGAGGCTG+AGG - chr8_4:8184425-8184444 Msa1311400:intron 50.0%
CACCAAACTGCTCCTCAATG+TGG + chr8_4:8184530-8184549 None:intergenic 50.0%
CACATTGAGGAGCAGTTTGG+TGG - chr8_4:8184528-8184547 Msa1311400:intron 50.0%
! ATTGAGGAGCAGTTTGGTGG+TGG - chr8_4:8184531-8184550 Msa1311400:intron 50.0%
GCATGCATTTCTTCTCGACC+TGG - chr8_4:8180104-8180123 Msa1311400:intron 50.0%
TCTTCTCGACCTGGTCAATG+CGG - chr8_4:8180113-8180132 Msa1311400:intron 50.0%
ACTCCAGAAGAAGAAGGGCA+AGG - chr8_4:8184735-8184754 Msa1311400:intron 50.0%
CTCCAGAAGAAGAAGGGCAA+GGG - chr8_4:8184736-8184755 Msa1311400:intron 50.0%
TGTGCTTCAGCTGATGCTGT+TGG - chr8_4:8184841-8184860 Msa1311400:intron 50.0%
GATTTCGACTTTGACGCCGC+CGG - chr8_4:8170144-8170163 Msa1311400:three_prime_UTR 55.0%
GCACCTTCATCACCATGAGC+TGG + chr8_4:8171948-8171967 None:intergenic 55.0%
GCTCTGCTTCATCATCGCCA+TGG + chr8_4:8172271-8172290 None:intergenic 55.0%
TGGTTCATCCGAGTCTCAGC+AGG - chr8_4:8172493-8172512 Msa1311400:intron 55.0%
GTCTCAGCAGGAATTGGCAG+TGG - chr8_4:8172505-8172524 Msa1311400:intron 55.0%
GGAGAGAAGGTAGAAGCTGC+GGG - chr8_4:8173242-8173261 Msa1311400:intron 55.0%
CTGGTGTACTATCTGAGGGG+CGG - chr8_4:8174490-8174509 Msa1311400:intron 55.0%
CCAACGCCAACACTCCAATG+AGG + chr8_4:8174624-8174643 None:intergenic 55.0%
!! CCTCATTGGAGTGTTGGCGT+TGG - chr8_4:8174621-8174640 Msa1311400:intron 55.0%
TGCACAATTCCGTGTGCTGG+TGG - chr8_4:8174998-8175017 Msa1311400:intron 55.0%
GATGGCAACAGGCAGTTGTG+TGG - chr8_4:8175772-8175791 Msa1311400:CDS 55.0%
! CTAGCTGGGTTGGAAGCTTC+TGG + chr8_4:8176004-8176023 None:intergenic 55.0%
CAGAAGCTTCCAACCCAGCT+AGG - chr8_4:8176002-8176021 Msa1311400:intron 55.0%
TGGAATTAGGGTCCGCGTAG+AGG - chr8_4:8178331-8178350 Msa1311400:intron 55.0%
GGGGAAGTGAAGCTGTCACT+CGG - chr8_4:8179400-8179419 Msa1311400:intron 55.0%
!! CTTCAATGTGGGCATCGAGC+TGG + chr8_4:8180058-8180077 None:intergenic 55.0%
TCGACCTGGTCAATGTGGCA+GGG - chr8_4:8180118-8180137 Msa1311400:intron 55.0%
GTCAATGTGGCAGGGCTGAT+GGG - chr8_4:8180126-8180145 Msa1311400:intron 55.0%
!! TTTTGACTCGTGCTCCGCTC+GGG + chr8_4:8181455-8181474 None:intergenic 55.0%
!! TGCGCCTGTTTATGATGGGC+CGG - chr8_4:8182468-8182487 Msa1311400:intron 55.0%
TGACCCGGCCCATCATAAAC+AGG + chr8_4:8182475-8182494 None:intergenic 55.0%
CGATGCGCTTCAACTAGCTC+CGG + chr8_4:8182573-8182592 None:intergenic 55.0%
CATCAAGCTGGCGCTCTTTC+TGG + chr8_4:8184506-8184525 None:intergenic 55.0%
CCTCAATGTGGGCATCAAGC+TGG + chr8_4:8184518-8184537 None:intergenic 55.0%
CCAGCTTGATGCCCACATTG+AGG - chr8_4:8184515-8184534 Msa1311400:intron 55.0%
GCCCACATTGAGGAGCAGTT+TGG - chr8_4:8184525-8184544 Msa1311400:intron 55.0%
GTCAATGCGGCAGAGCTGAT+GGG - chr8_4:8184586-8184605 Msa1311400:intron 55.0%
CACCCTTGCCCTTCTTCTTC+TGG + chr8_4:8184741-8184760 None:intergenic 55.0%
GGCCCTCTATAGAAGGGCTC+AGG - chr8_4:8173682-8173701 Msa1311400:intron 60.0%
TGCTTGTGGCACGACAAGGG+TGG + chr8_4:8174737-8174756 None:intergenic 60.0%
GGCTGCACAATTCCGTGTGC+TGG - chr8_4:8174995-8175014 Msa1311400:intron 60.0%
CAGGTGGAACCACCAGCACA+CGG + chr8_4:8175010-8175029 None:intergenic 60.0%
GGATTCACTCCCTGTGCACC+TGG + chr8_4:8176444-8176463 None:intergenic 60.0%
!! TGCTCTTGCGTGGAGCACTG+TGG - chr8_4:8176488-8176507 Msa1311400:intron 60.0%
CTCGACCTGGTCAATGTGGC+AGG - chr8_4:8180117-8180136 Msa1311400:intron 60.0%
TCAGCCCTGCCACATTGACC+AGG + chr8_4:8180125-8180144 None:intergenic 60.0%
GGTCAATGTGGCAGGGCTGA+TGG - chr8_4:8180125-8180144 Msa1311400:intron 60.0%
!! GCGCCTGTTTATGATGGGCC+GGG - chr8_4:8182469-8182488 Msa1311400:intron 60.0%
! TCAGCTCTGCCGCATTGACC+AGG + chr8_4:8184585-8184604 None:intergenic 60.0%
GGTCAATGCGGCAGAGCTGA+TGG - chr8_4:8184585-8184604 Msa1311400:intron 60.0%
! GTGCTGGTGGTTCCACCTGC+AGG - chr8_4:8175011-8175030 Msa1311400:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 8170099 8185067 8170099 ID=Msa1311400;Name=Msa1311400
chr8_4 mRNA 8170099 8185067 8170099 ID=Msa1311400-mRNA-1;Parent=Msa1311400;Name=Msa1311400-mRNA-1;_AED=0.14;_eAED=0.24;_QI=0|0.27|0.25|0.91|0.63|0.75|12|299|526
chr8_4 exon 8170099 8170473 8170099 ID=Msa1311400-mRNA-1:exon:3028;Parent=Msa1311400-mRNA-1
chr8_4 exon 8170559 8170728 8170559 ID=Msa1311400-mRNA-1:exon:3027;Parent=Msa1311400-mRNA-1
chr8_4 exon 8171210 8171299 8171210 ID=Msa1311400-mRNA-1:exon:3026;Parent=Msa1311400-mRNA-1
chr8_4 exon 8171306 8171534 8171306 ID=Msa1311400-mRNA-1:exon:3025;Parent=Msa1311400-mRNA-1
chr8_4 exon 8172356 8172428 8172356 ID=Msa1311400-mRNA-1:exon:3024;Parent=Msa1311400-mRNA-1
chr8_4 exon 8174862 8174926 8174862 ID=Msa1311400-mRNA-1:exon:3023;Parent=Msa1311400-mRNA-1
chr8_4 exon 8175019 8175188 8175019 ID=Msa1311400-mRNA-1:exon:3022;Parent=Msa1311400-mRNA-1
chr8_4 exon 8175561 8175656 8175561 ID=Msa1311400-mRNA-1:exon:3021;Parent=Msa1311400-mRNA-1
chr8_4 exon 8175663 8175891 8175663 ID=Msa1311400-mRNA-1:exon:3020;Parent=Msa1311400-mRNA-1
chr8_4 exon 8177023 8177081 8177023 ID=Msa1311400-mRNA-1:exon:3019;Parent=Msa1311400-mRNA-1
chr8_4 exon 8178585 8178721 8178585 ID=Msa1311400-mRNA-1:exon:3018;Parent=Msa1311400-mRNA-1
chr8_4 exon 8184881 8185067 8184881 ID=Msa1311400-mRNA-1:exon:3017;Parent=Msa1311400-mRNA-1
chr8_4 CDS 8184881 8185067 8184881 ID=Msa1311400-mRNA-1:cds;Parent=Msa1311400-mRNA-1
chr8_4 CDS 8178585 8178721 8178585 ID=Msa1311400-mRNA-1:cds;Parent=Msa1311400-mRNA-1
chr8_4 CDS 8177023 8177081 8177023 ID=Msa1311400-mRNA-1:cds;Parent=Msa1311400-mRNA-1
chr8_4 CDS 8175663 8175891 8175663 ID=Msa1311400-mRNA-1:cds;Parent=Msa1311400-mRNA-1
chr8_4 CDS 8175561 8175656 8175561 ID=Msa1311400-mRNA-1:cds;Parent=Msa1311400-mRNA-1
chr8_4 CDS 8175019 8175188 8175019 ID=Msa1311400-mRNA-1:cds;Parent=Msa1311400-mRNA-1
chr8_4 CDS 8174862 8174926 8174862 ID=Msa1311400-mRNA-1:cds;Parent=Msa1311400-mRNA-1
chr8_4 CDS 8172356 8172428 8172356 ID=Msa1311400-mRNA-1:cds;Parent=Msa1311400-mRNA-1
chr8_4 CDS 8171306 8171534 8171306 ID=Msa1311400-mRNA-1:cds;Parent=Msa1311400-mRNA-1
chr8_4 CDS 8171210 8171299 8171210 ID=Msa1311400-mRNA-1:cds;Parent=Msa1311400-mRNA-1
chr8_4 CDS 8170559 8170728 8170559 ID=Msa1311400-mRNA-1:cds;Parent=Msa1311400-mRNA-1
chr8_4 CDS 8170398 8170473 8170398 ID=Msa1311400-mRNA-1:cds;Parent=Msa1311400-mRNA-1
chr8_4 three_prime_UTR 8170099 8170397 8170099 ID=Msa1311400-mRNA-1:three_prime_utr;Parent=Msa1311400-mRNA-1
Gene Sequence

>Msa1311400

ATGGACGAAGATTTCGATATTCCTGCGGTTGATTCCATGAACGACGATTTCGACTTTGACGCCGCCGGCGATAATCCAATTCTCAAGGTCGGTGAGGAAAAGGAAATCGGAAAGCAAGGTTTGAAGAAGAAGCTTCTCAAAGAAGGTGAAGGTTGGGATACTCCTGATGTTGGCGACGAAGTTCACGGTGCACAGGGAGTGAATCCTCAAGTGAAATTGATCACACAACATGCTCTTGCGTGGAGCACTGTGGTTGCAACCCATGCGCATGCCCTAAGAATGTTGCAGCTGGAACTGGTTGCAAATGTTCCTCAGCTTGCACATGAGGACAAAAAGGCTTGCAACTGGCGGCAAAAGGAAGACATGCATAAAGAAGAGAAAGTGTATGAGCTCGGTCGCCAGCCAGCTAACACCAAGCTATCAAGCAACAAAACAGTGAGGAGTATTCGTGTTAGAGGTGGCAATTTGAAATGTAGAGCTTTGAGATTGGATACTGGAAACATCTCATGGGGAAGTGAAGCTGTCACTCGGAAAACCCGTTTGCTAAATGTGGTTTACAATGCTTCCAACAATGAGCTTGTGCGAACTCAGACTCTTGTTAAGAGCGCTATCGTCGATGCTGCTCCATTCAAGCAGTGGTACCTTCAACACTATGGTGTTGAAATTGGTAACAAAAAGAAAATTGCTGCCAAAAAGGACTCTGCACAGGAGGCTGAAGCTGCTACAGAAGAAACCAAAAAGAGTAACCATGTGCTGAGGAAATTGGAGAATCGCGAGAAAGATCGCCAGCTCGATGCCCACATTGAAGAGCAGTTTGGTGGTGGGCGATTACTTGCATGCATTTCTTCTCGACCTGGTCAATGTGGCAGGGCTGATGGCTACGTTTTGGAAGGTAAGGAGTTGGAATTCTACATGAAGAAACTGCAGAGGAAGAAGGGCAAGAGTATTTCACGAGATTCTATGCACAAGAGACGTGAAACTGGTGGCAAGAAGAAAGCATGGAGGAAGAAGAGAAAGTACGAGCTCGGTCGCCAGCCAGCTAACACAAAACTATCAAGCAACAAGACAGTGAGGAGGATTCGTGTTAGAGGTGGAAATGTGAAGTGGAGAGCTTTGAGATTGGATACCGGTAACTTCTCATGGGGAAGTGAAGCTGTCACTCGCAAAACCCGTTTGCTCGATGTGGTTTACAATGCTTCCAACAATGAGTTGGTGCGAACTCAGACTCTTGTGAAGAGTGCTATTGTTGATGCTGCTCCCTTCAAGCAATGGTACCTTCAACACTATGGTGTTGATATTGGTAGAAAGAAGAAAAATGTTAGCAAGAAAGAGGAGGAGGCTGAGGCTGCTACAGAAGAAGTCAAAAAGAGTGCCCATGTGCAGAGAAAATTAGAGCAACGCCAGAAAGAGCGCCAGCTTGATGCCCACATTGAGGAGCAGTTTGGTGGTGGACGATTGCTTGCATGCATTTCTTCTCGACCTGGTCAATGCGGCAGAGCTGATGGCTACATTCTTGAAGGTAAGGAGCTAGAATTCTACATGAAGAAACTCCAGAAGAAGAAGGGCAAGGGTGCCGCTTGA

Protein sequence

>Msa1311400

MDEDFDIPAVDSMNDDFDFDAAGDNPILKVGEEKEIGKQGLKKKLLKEGEGWDTPDVGDEVHGAQGVNPQVKLITQHALAWSTVVATHAHALRMLQLELVANVPQLAHEDKKACNWRQKEDMHKEEKVYELGRQPANTKLSSNKTVRSIRVRGGNLKCRALRLDTGNISWGSEAVTRKTRLLNVVYNASNNELVRTQTLVKSAIVDAAPFKQWYLQHYGVEIGNKKKIAAKKDSAQEAEAATEETKKSNHVLRKLENREKDRQLDAHIEEQFGGGRLLACISSRPGQCGRADGYVLEGKELEFYMKKLQRKKGKSISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVDAAPFKQWYLQHYGVDIGRKKKNVSKKEEEAEAATEEVKKSAHVQRKLEQRQKERQLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA*