AlfalfaGEDB | Msa1463570

M. sativa cultivar zhongmu-4 / Msa1463570

KEGG: K02885
GO: -
PFAM: PF01280.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1463570	XP_003591473.1	99.061	213	2	0	1	213	1	213	1.96e-150	426

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1463570	sp\|Q9LUQ6\|RL192_ARATH	84.135	208	31	1	1	206	1	208	1.67e-124	353

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1463570	B7FHF4	99.061	213	2	0	1	213	1	213	9.38e-151	426

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001760	Msa1463570	0.883734	3.490041e-71	-8.615850e-47
Msa0003330	Msa1463570	0.871131	8.631277e-67	-8.615850e-47
Msa0027590	Msa1463570	0.884345	2.075432e-71	-8.615850e-47
Msa0040220	Msa1463570	0.840465	8.557081e-58	-8.615850e-47
Msa0075350	Msa1463570	0.839594	1.443059e-57	-8.615850e-47
Msa0079560	Msa1463570	0.800915	1.151858e-48	-8.615850e-47
Msa0087910	Msa1463570	0.883771	3.383525e-71	-8.615850e-47
Msa0114600	Msa1463570	0.822524	2.262723e-53	-8.615850e-47
Msa1351020	Msa1463570	0.902478	9.308225e-79	-8.615850e-47
Msa1351910	Msa1463570	0.818608	1.793699e-52	-8.615850e-47
Msa1353300	Msa1463570	0.814832	1.260190e-51	-8.615850e-47
Msa1358710	Msa1463570	0.827045	1.943003e-54	-8.615850e-47
Msa1368920	Msa1463570	0.841475	4.647235e-58	-8.615850e-47
Msa1371410	Msa1463570	0.813767	2.167017e-51	-8.615850e-47
Msa1374480	Msa1463570	0.823476	1.357215e-53	-8.615850e-47
Msa1385480	Msa1463570	0.937103	5.965084e-98	-8.615850e-47
Msa1390760	Msa1463570	0.887332	1.566749e-72	-8.615850e-47
Msa1397100	Msa1463570	0.819641	1.044066e-52	-8.615850e-47
Msa1403910	Msa1463570	0.820351	7.181308e-53	-8.615850e-47
Msa1407550	Msa1463570	0.872705	2.589044e-67	-8.615850e-47
Msa1413570	Msa1463570	0.851390	9.154371e-61	-8.615850e-47
Msa1415620	Msa1463570	0.805222	1.481157e-49	-8.615850e-47
Msa1424570	Msa1463570	0.833711	4.557450e-56	-8.615850e-47
Msa1432310	Msa1463570	0.909393	5.983175e-82	-8.615850e-47
Msa1446410	Msa1463570	0.887641	1.193341e-72	-8.615850e-47
Msa1450560	Msa1463570	0.817184	3.762382e-52	-8.615850e-47
Msa1463570	Msa1465700	0.848932	4.471796e-60	-8.615850e-47
Msa0602900	Msa1463570	0.870446	1.450480e-66	-8.615850e-47
Msa0605600	Msa1463570	0.817450	3.276857e-52	-8.615850e-47
Msa0605890	Msa1463570	0.884771	1.442272e-71	-8.615850e-47
Msa0609350	Msa1463570	0.811370	7.243496e-51	-8.615850e-47
Msa0619230	Msa1463570	0.890156	1.270281e-73	-8.615850e-47
Msa0643960	Msa1463570	0.870158	1.803128e-66	-8.615850e-47
Msa0649890	Msa1463570	0.899124	2.703464e-77	-8.615850e-47
Msa0653060	Msa1463570	0.825842	3.759171e-54	-8.615850e-47
Msa0656450	Msa1463570	0.843213	1.609187e-58	-8.615850e-47
Msa0663400	Msa1463570	0.831505	1.607213e-55	-8.615850e-47
Msa0686550	Msa1463570	0.846038	2.791826e-59	-8.615850e-47
Msa0694400	Msa1463570	0.945707	1.841960e-104	-8.615850e-47
Msa0704860	Msa1463570	0.874970	4.452635e-68	-8.615850e-47
Msa0705800	Msa1463570	0.831769	1.383204e-55	-8.615850e-47
Msa0708630	Msa1463570	0.888571	5.247645e-73	-8.615850e-47
Msa0741510	Msa1463570	0.856584	2.913896e-62	-8.615850e-47
Msa0748350	Msa1463570	0.828412	9.123004e-55	-8.615850e-47
Msa0749000	Msa1463570	0.814083	1.845745e-51	-8.615850e-47
Msa0758420	Msa1463570	0.821482	3.944078e-53	-8.615850e-47
Msa0788380	Msa1463570	0.859115	5.171375e-63	-8.615850e-47
Msa0790450	Msa1463570	0.809342	1.983926e-50	-8.615850e-47
Msa0796490	Msa1463570	0.827598	1.432104e-54	-8.615850e-47
Msa0838070	Msa1463570	0.844628	6.718877e-59	-8.615850e-47
Msa0128330	Msa1463570	0.997297	4.249425e-240	-8.615850e-47
Msa0128750	Msa1463570	0.897680	1.111156e-76	-8.615850e-47
Msa0132460	Msa1463570	0.888520	5.487624e-73	-8.615850e-47
Msa0134580	Msa1463570	0.882333	1.137818e-70	-8.615850e-47
Msa0146610	Msa1463570	0.829118	6.155038e-55	-8.615850e-47
Msa0167860	Msa1463570	0.915819	3.738761e-85	-8.615850e-47
Msa0168320	Msa1463570	0.849157	3.871023e-60	-8.615850e-47
Msa0174580	Msa1463570	0.988519	2.452458e-174	-8.615850e-47
Msa0182050	Msa1463570	0.893590	5.456895e-75	-8.615850e-47
Msa0182100	Msa1463570	0.882746	8.044570e-71	-8.615850e-47
Msa0191450	Msa1463570	0.894698	1.930396e-75	-8.615850e-47
Msa0191550	Msa1463570	0.901276	3.155171e-78	-8.615850e-47
Msa0192300	Msa1463570	0.866111	3.620241e-65	-8.615850e-47
Msa0194940	Msa1463570	0.900781	5.193278e-78	-8.615850e-47
Msa0210330	Msa1463570	0.801393	9.198375e-49	-8.615850e-47
Msa0216200	Msa1463570	0.804589	2.009126e-49	-8.615850e-47
Msa0225350	Msa1463570	0.828012	1.138586e-54	-8.615850e-47
Msa0233550	Msa1463570	0.838557	2.680155e-57	-8.615850e-47
Msa0234850	Msa1463570	0.820704	5.960063e-53	-8.615850e-47
Msa0235050	Msa1463570	0.840715	7.357181e-58	-8.615850e-47
Msa1235950	Msa1463570	0.844909	5.644055e-59	-8.615850e-47
Msa1235980	Msa1463570	0.855433	6.328899e-62	-8.615850e-47
Msa1237040	Msa1463570	0.846794	1.736021e-59	-8.615850e-47
Msa1240270	Msa1463570	0.826749	2.286693e-54	-8.615850e-47
Msa1255830	Msa1463570	0.806511	7.937989e-50	-8.615850e-47
Msa1255850	Msa1463570	0.822654	2.110272e-53	-8.615850e-47
Msa1258540	Msa1463570	0.872229	3.732556e-67	-8.615850e-47
Msa1270640	Msa1463570	0.879704	1.002461e-69	-8.615850e-47
Msa1270710	Msa1463570	0.876883	9.795827e-69	-8.615850e-47
Msa1278130	Msa1463570	0.800767	1.235217e-48	-8.615850e-47
Msa1284060	Msa1463570	0.828323	9.580945e-55	-8.615850e-47
Msa1295150	Msa1463570	0.850659	1.472161e-60	-8.615850e-47
Msa1295170	Msa1463570	0.804620	1.978964e-49	-8.615850e-47
Msa1296090	Msa1463570	0.813917	2.007809e-51	-8.615850e-47
Msa1311400	Msa1463570	0.851230	1.015837e-60	-8.615850e-47
Msa1316100	Msa1463570	0.801705	7.938349e-49	-8.615850e-47
Msa1317390	Msa1463570	0.863135	3.089941e-64	-8.615850e-47
Msa1333370	Msa1463570	0.804692	1.911856e-49	-8.615850e-47
Msa1341780	Msa1463570	0.826622	2.452264e-54	-8.615850e-47
Msa0369410	Msa1463570	0.863657	2.128152e-64	-8.615850e-47
Msa0371490	Msa1463570	0.842676	2.235550e-58	-8.615850e-47
Msa0377520	Msa1463570	0.849049	4.148981e-60	-8.615850e-47
Msa0419710	Msa1463570	0.808330	3.266510e-50	-8.615850e-47
Msa0426090	Msa1463570	0.886769	2.564228e-72	-8.615850e-47
Msa0426250	Msa1463570	0.908296	1.995378e-81	-8.615850e-47
Msa0432750	Msa1463570	0.801195	1.009812e-48	-8.615850e-47
Msa0436750	Msa1463570	0.801705	7.938349e-49	-8.615850e-47
Msa0450150	Msa1463570	0.839774	1.295470e-57	-8.615850e-47
Msa0463520	Msa1463570	0.823471	1.360901e-53	-8.615850e-47
Msa0471880	Msa1463570	0.825793	3.861447e-54	-8.615850e-47
Msa0472480	Msa1463570	0.876353	1.494120e-68	-8.615850e-47
Msa0473570	Msa1463570	0.813716	2.223086e-51	-8.615850e-47
Msa0475810	Msa1463570	0.815860	7.445836e-52	-8.615850e-47
Msa0479980	Msa1463570	0.800481	1.412685e-48	-8.615850e-47
Msa0481520	Msa1463570	0.912050	3.035727e-83	-8.615850e-47
Msa0481800	Msa1463570	0.853044	3.099107e-61	-8.615850e-47
Msa0481850	Msa1463570	0.806039	9.984057e-50	-8.615850e-47
Msa0482560	Msa1463570	0.859899	3.004544e-63	-8.615850e-47
Msa1037290	Msa1463570	0.840728	7.301485e-58	-8.615850e-47
Msa1040160	Msa1463570	0.827676	1.371588e-54	-8.615850e-47
Msa1041680	Msa1463570	0.825842	3.759171e-54	-8.615850e-47
Msa1042100	Msa1463570	0.808571	2.900587e-50	-8.615850e-47
Msa1068660	Msa1463570	0.800256	1.569264e-48	-8.615850e-47
Msa1079910	Msa1463570	0.852975	3.243818e-61	-8.615850e-47
Msa1080390	Msa1463570	0.838963	2.103733e-57	-8.615850e-47
Msa1082050	Msa1463570	0.810382	1.184916e-50	-8.615850e-47
Msa1082170	Msa1463570	0.815297	9.937415e-52	-8.615850e-47
Msa1083370	Msa1463570	0.835585	1.539929e-56	-8.615850e-47
Msa1093500	Msa1463570	0.877250	7.308286e-69	-8.615850e-47
Msa0239420	Msa1463570	0.804280	2.329826e-49	-8.615850e-47
Msa0264640	Msa1463570	0.830784	2.415783e-55	-8.615850e-47
Msa0277600	Msa1463570	0.921668	2.661827e-88	-8.615850e-47
Msa0281370	Msa1463570	0.811318	7.432880e-51	-8.615850e-47
Msa0301220	Msa1463570	0.825210	5.307290e-54	-8.615850e-47
Msa0301250	Msa1463570	0.875595	2.723287e-68	-8.615850e-47
Msa0313060	Msa1463570	0.881046	3.323738e-70	-8.615850e-47
Msa0313520	Msa1463570	0.808545	2.938550e-50	-8.615850e-47
Msa0315430	Msa1463570	0.933117	3.059393e-95	-8.615850e-47
Msa1124850	Msa1463570	0.855856	4.762512e-62	-8.615850e-47
Msa1125900	Msa1463570	0.854043	1.600785e-61	-8.615850e-47
Msa1126100	Msa1463570	0.841564	4.401832e-58	-8.615850e-47
Msa1126520	Msa1463570	0.821255	4.448979e-53	-8.615850e-47
Msa1126690	Msa1463570	0.865217	6.932174e-65	-8.615850e-47
Msa1164150	Msa1463570	0.874169	8.331791e-68	-8.615850e-47
Msa1165640	Msa1463570	0.802852	4.608171e-49	-8.615850e-47
Msa1166570	Msa1463570	0.834305	3.237449e-56	-8.615850e-47
Msa1167540	Msa1463570	0.832237	1.060338e-55	-8.615850e-47
Msa1180000	Msa1463570	0.893426	6.356114e-75	-8.615850e-47
Msa1183830	Msa1463570	0.805848	1.094701e-49	-8.615850e-47
Msa1186030	Msa1463570	0.831181	1.930618e-55	-8.615850e-47
Msa1208330	Msa1463570	0.831632	1.495325e-55	-8.615850e-47
Msa0484730	Msa1463570	0.825240	5.220664e-54	-8.615850e-47
Msa0511760	Msa1463570	0.852212	5.355040e-61	-8.615850e-47
Msa0517480	Msa1463570	0.867183	1.651508e-65	-8.615850e-47
Msa0529900	Msa1463570	0.880354	5.881576e-70	-8.615850e-47
Msa0540480	Msa1463570	0.806759	7.037606e-50	-8.615850e-47
Msa0547920	Msa1463570	0.885723	6.356906e-72	-8.615850e-47
Msa0550420	Msa1463570	0.804652	1.949249e-49	-8.615850e-47
Msa0573550	Msa1463570	0.903240	4.256686e-79	-8.615850e-47
Msa0574780	Msa1463570	0.875284	3.479913e-68	-8.615850e-47
Msa0578010	Msa1463570	0.842422	2.611558e-58	-8.615850e-47
Msa0579830	Msa1463570	0.900833	4.930795e-78	-8.615850e-47
Msa0585570	Msa1463570	0.816580	5.138891e-52	-8.615850e-47
Msa0597240	Msa1463570	0.864937	8.485358e-65	-8.615850e-47
Msa0902730	Msa1463570	0.874301	7.515212e-68	-8.615850e-47
Msa0929680	Msa1463570	0.817254	3.626953e-52	-8.615850e-47
Msa0929700	Msa1463570	0.891022	5.804010e-74	-8.615850e-47
Msa0930100	Msa1463570	0.824293	8.730046e-54	-8.615850e-47
Msa0930360	Msa1463570	0.801923	7.161344e-49	-8.615850e-47
Msa0930790	Msa1463570	0.849577	2.957952e-60	-8.615850e-47
Msa0930890	Msa1463570	0.869402	3.181226e-66	-8.615850e-47
Msa0978470	Msa1463570	0.819244	1.285844e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1463570	MtrunA17_Chr1g0195141	99.061	213	2	0	1	213	1	213	1.81e-154	426
Msa1463570	MtrunA17_Chr7g0269621	93.023	215	13	1	1	213	1	215	1.91e-132	371

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1463570	AT3G16780.1	84.135	208	31	1	1	206	1	208	1.70e-125	353
Msa1463570	AT1G02780.1	92.473	186	14	0	1	186	1	186	8.64e-116	329
Msa1463570	AT4G02230.1	85.915	213	25	1	1	213	1	208	8.16e-115	326
Msa1463570	AT4G16030.1	42.384	151	32	9	57	195	6	113	1.72e-14	67.4

Find 91 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGGATACTTGATTTACTTCT+TGG	0.183729	tig0043435:-4805	None:intergenic
CCTCCTCATCCAAAGGATTT+TGG	0.205932	tig0043435:-4248	None:intergenic
TACTTCTTGGATTTCTTTGA+TGG	0.223836	tig0043435:-4792	None:intergenic
AAAGGAAGGAATTTCATAAT+TGG	0.234687	tig0043435:-4972	None:intergenic
TAACCAACTTCCTGATGTTT+TGG	0.238015	tig0043435:-3630	None:intergenic
AGGCATGATAGGAGAATTAA+AGG	0.298089	tig0043435:-4990	None:intergenic
GAGATTTCATTGCACTCATT+AGG	0.315100	tig0043435:-2961	None:intergenic
GCTGTTGCAGCTGGTGCGGC+TGG	0.322299	tig0043435:-4678	None:intergenic
CTCTCTAGCCTTCTCAGCCT+TGG	0.342124	tig0043435:-4410	None:intergenic
GCGGCTGGTGCTGCAGCTGC+AGG	0.351870	tig0043435:-4663	None:intergenic
GGCCAAGAGGGCGAAGAATA+AGG	0.353398	tig0043435:+4456	Msa1463570:CDS
CAAGAACAAGAGAGTCCTTA+TGG	0.366020	tig0043435:+4372	Msa1463570:CDS
AGATTTCATTGCACTCATTA+GGG	0.375558	tig0043435:-2960	None:intergenic
TCTCTCCCTCACACTCTCTC+TGG	0.385309	tig0043435:-2852	None:intergenic
GACTGGGTTGCTGTTGCAGC+TGG	0.390238	tig0043435:-4687	None:intergenic
AAGGGACGTCATTCTGGATA+TGG	0.390520	tig0043435:+3730	Msa1463570:CDS
AAGAGGAAGGGACGTCATTC+TGG	0.393970	tig0043435:+3724	Msa1463570:CDS
GGCTCCCCACCAAAATCCTT+TGG	0.400346	tig0043435:+4239	Msa1463570:CDS
AGTGAATCTTAGTTGGCTTC+CGG	0.400791	tig0043435:-3669	None:intergenic
AGCCTTATTCTTCGCCCTCT+TGG	0.400876	tig0043435:-4458	None:intergenic
TGTCAATCTTCTTTGCCTCT+CGG	0.425253	tig0043435:-4303	None:intergenic
TTAAGGATGGCTTCATTATC+CGG	0.428777	tig0043435:+3650	Msa1463570:CDS
AGTGTGGTCGTGGCAAGGTC+TGG	0.433202	tig0043435:+2932	Msa1463570:CDS
AACTAGGGTTAGTGAGAGAT+AGG	0.436037	tig0043435:+2792	Msa1463570:five_prime_UTR
TCGTTGCAGGCCAAAACATC+AGG	0.437194	tig0043435:+3620	Msa1463570:intron
GTTTAGATACTTACTGGGAC+TGG	0.459001	tig0043435:-4704	None:intergenic
GCTGCAGGAACCTTCTCTCC+TGG	0.459743	tig0043435:-4648	None:intergenic
AAACATCAGGAAGTTGGTTA+AGG	0.466451	tig0043435:+3633	Msa1463570:CDS
AGCAAAGCGCTCTTCTCTGC+GGG	0.467270	tig0043435:-4500	None:intergenic
TTGATAAATAGGTAAAAGAA+AGG	0.468156	tig0043435:+4201	Msa1463570:intron
GACATTATCTGATCAGTTTG+AGG	0.469564	tig0043435:+4435	Msa1463570:CDS
GTAGCAGTAGTTACGTGAAT+TGG	0.471557	tig0043435:-2989	None:intergenic
GGGCGAAGAATAAGGCTAGC+AGG	0.473984	tig0043435:+4464	Msa1463570:CDS
TGAGGAGGATGCGTGTCCTC+AGG	0.478520	tig0043435:+4263	Msa1463570:CDS
GAGCGGGAGTGAATCTTAGT+TGG	0.479570	tig0043435:-3676	None:intergenic
AAATGAAAATACTCGACCTC+TGG	0.480180	tig0043435:-4825	None:intergenic
TTCACTCCCGCTCCCGTGCT+AGG	0.486394	tig0043435:+3686	Msa1463570:CDS
TGGTCGTGGCAAGGTCTGGC+TGG	0.492270	tig0043435:+2936	Msa1463570:CDS
AGCGTACTCAAGTGTGGTCG+TGG	0.503558	tig0043435:+2922	Msa1463570:CDS
CTCCTTCATACGCCTAGCAC+GGG	0.507928	tig0043435:-3698	None:intergenic
AGAATGACGTCCCTTCCTCT+TGG	0.519292	tig0043435:-3722	None:intergenic
CTCCCGTGCTAGGCGTATGA+AGG	0.520929	tig0043435:+3696	Msa1463570:CDS
CCTCCTTCATACGCCTAGCA+CGG	0.532368	tig0043435:-3699	None:intergenic
ATGATAGGAGAATTAAAGGA+AGG	0.532991	tig0043435:-4986	None:intergenic
ACTTGTGAATACTCTCCATA+AGG	0.533671	tig0043435:-4387	None:intergenic
ATATAGCCTCCTTCCACCGC+AGG	0.537517	tig0043435:+2821	Msa1463570:five_prime_UTR
AGGCCAAAACATCAGGAAGT+TGG	0.540880	tig0043435:+3627	Msa1463570:intron
ATCAGGAAGTTGGTTAAGGA+TGG	0.541752	tig0043435:+3637	Msa1463570:CDS
TCACAAGTCCAAGGCTGAGA+AGG	0.542917	tig0043435:+4402	Msa1463570:CDS
TTTAGATACTTACTGGGACT+GGG	0.545217	tig0043435:-4703	None:intergenic
CATACGCCTAGCACGGGAGC+GGG	0.545913	tig0043435:-3692	None:intergenic
CCACCAAAATCCTTTGGATG+AGG	0.555880	tig0043435:+4245	Msa1463570:CDS
GTTCGATAACCTGCGGTGGA+AGG	0.557244	tig0043435:-2830	None:intergenic
TATGAAGGAGGCCAAGAGGA+AGG	0.560584	tig0043435:+3711	Msa1463570:CDS
TGATATGTACATGAAGGTGA+AGG	0.563752	tig0043435:+4339	Msa1463570:CDS
TGTATAGGGTCCAGGAGAGA+AGG	0.563890	tig0043435:+4638	Msa1463570:intron
TGATAAATAGGTAAAAGAAA+GGG	0.567052	tig0043435:+4202	Msa1463570:intron
TCATACGCCTAGCACGGGAG+CGG	0.568186	tig0043435:-3693	None:intergenic
ACTCAAGTGTGGTCGTGGCA+AGG	0.568268	tig0043435:+2927	Msa1463570:CDS
CCAAAATCCTTTGGATGAGG+AGG	0.569919	tig0043435:+4248	Msa1463570:CDS
GGGAGAGAGAAAGAGAGAGA+TGG	0.573584	tig0043435:+2867	Msa1463570:exon
CGATAACCTGCGGTGGAAGG+AGG	0.574079	tig0043435:-2827	None:intergenic
ATCGAACCAGAGAGAGTGTG+AGG	0.575582	tig0043435:+2846	Msa1463570:five_prime_UTR
GGCGAAGAATAAGGCTAGCA+GGG	0.575881	tig0043435:+4465	Msa1463570:CDS
AGAATAAGGCTAGCAGGGAA+AGG	0.589605	tig0043435:+4470	Msa1463570:CDS
GAGCAAAGCGCTCTTCTCTG+CGG	0.593895	tig0043435:-4501	None:intergenic
TGATCAGTTTGAGGCCAAGA+GGG	0.598337	tig0043435:+4444	Msa1463570:CDS
TTGGTATGGAAAATGCACTT+TGG	0.600057	tig0043435:+4922	Msa1463570:three_prime_UTR
CCGTGCTAGGCGTATGAAGG+AGG	0.607212	tig0043435:+3699	Msa1463570:CDS
TAAAAGAAAGGGTACAAGAG+AGG	0.608223	tig0043435:+4213	Msa1463570:CDS
CACGCATCCTCCTCATCCAA+AGG	0.610691	tig0043435:-4255	None:intergenic
GAAAGGGTACAAGAGAGGCT+AGG	0.611551	tig0043435:+4218	Msa1463570:CDS
CTCTCTGGTTCGATAACCTG+CGG	0.612831	tig0043435:-2837	None:intergenic
GATATGTACATGAAGGTGAA+GGG	0.614061	tig0043435:+4340	Msa1463570:CDS
ATGAAGGAGGCCAAGAGGAA+GGG	0.617125	tig0043435:+3712	Msa1463570:CDS
GGAGAGTATTCACAAGTCCA+AGG	0.617146	tig0043435:+4393	Msa1463570:CDS
GGTTGCTGTTGCAGCTGGTG+CGG	0.620402	tig0043435:-4682	None:intergenic
TCTGGTTCGATAACCTGCGG+TGG	0.621365	tig0043435:-2834	None:intergenic
GCCGCCAGCGTACTCAAGTG+TGG	0.623938	tig0043435:+2916	Msa1463570:CDS
CTGATCAGTTTGAGGCCAAG+AGG	0.627289	tig0043435:+4443	Msa1463570:CDS
GGCGTATGAAGGAGGCCAAG+AGG	0.634053	tig0043435:+3707	Msa1463570:CDS
GTAGTTACGTGAATTGGCCA+TGG	0.639618	tig0043435:-2983	None:intergenic
TCGAACCAGAGAGAGTGTGA+GGG	0.651129	tig0043435:+2847	Msa1463570:five_prime_UTR
TGAGTGCAATGAAATCTCCA+TGG	0.652574	tig0043435:+2966	Msa1463570:CDS
GAAGTAAATCAAGTATCCAG+AGG	0.666529	tig0043435:+4809	Msa1463570:exon
ACGACCACACTTGAGTACGC+TGG	0.682599	tig0043435:-2920	None:intergenic
GTATCATGATATGTACATGA+AGG	0.691105	tig0043435:+4333	Msa1463570:CDS
ACCACACTTGAGTACGCTGG+CGG	0.695452	tig0043435:-2917	None:intergenic
TGTCGCTCAAACTTCAGAAG+CGG	0.696714	tig0043435:+2890	Msa1463570:CDS
TTTGCTTCGCAAGTACCGAG+AGG	0.708306	tig0043435:+4288	Msa1463570:CDS
ACTTGCGAAGCAAACGCCTG+AGG	0.708807	tig0043435:-4279	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TGTTAAAATATTTTAATTTC+AGG	+	tig0043435:3251-3270	Msa1463570:intron	10.0%
!!	AATTCATATTAAAACTATAA+AGG	-	tig0043435:3773-3792	None:intergenic	10.0%
!!!	TGTTAAAATATTTTAATTTC+AGG	+	tig0043435:3251-3270	Msa1463570:intron	10.0%
!!	AATTCATATTAAAACTATAA+AGG	-	tig0043435:3773-3792	None:intergenic	10.0%
!!!	ATAGTTTTAATATGAATTGA+AGG	+	tig0043435:3775-3794	Msa1463570:intron	15.0%
!!	CATATATTATCAAAACATTA+TGG	-	tig0043435:4536-4555	None:intergenic	15.0%
!!!	ATAGTTTTAATATGAATTGA+AGG	+	tig0043435:3775-3794	Msa1463570:intron	15.0%
!!	CATATATTATCAAAACATTA+TGG	-	tig0043435:4536-4555	None:intergenic	15.0%
!!	AAAATCATAACACAAAACAT+TGG	-	tig0043435:3032-3051	None:intergenic	20.0%
!!	TTCATAACAAAAATGAGTTA+AGG	-	tig0043435:3503-3522	None:intergenic	20.0%
!!	TAGAATACATTCAATCTATT+TGG	+	tig0043435:3886-3905	Msa1463570:intron	20.0%
!!	ATTTGCACTTATTGATAAAT+AGG	+	tig0043435:4190-4209	Msa1463570:intron	20.0%
!!	TTGATAAATAGGTAAAAGAA+AGG	+	tig0043435:4201-4220	Msa1463570:intron	20.0%
!!	TGATAAATAGGTAAAAGAAA+GGG	+	tig0043435:4202-4221	Msa1463570:intron	20.0%
!!	TGATAATATATGTAGTGAAT+TGG	+	tig0043435:4544-4563	Msa1463570:intron	20.0%
!!!	TAGTTTTTTTTGTTATGTTG+TGG	+	tig0043435:4744-4763	Msa1463570:intron	20.0%
!!!	TACAAGTACAATTTTGTATT+GGG	+	tig0043435:4880-4899	Msa1463570:three_prime_UTR	20.0%
!!!	TTTATATTTTGTTGCCATTT+TGG	+	tig0043435:4903-4922	Msa1463570:three_prime_UTR	20.0%
!!	AAAATCATAACACAAAACAT+TGG	-	tig0043435:3032-3051	None:intergenic	20.0%
!!	TTCATAACAAAAATGAGTTA+AGG	-	tig0043435:3503-3522	None:intergenic	20.0%
!!	TAGAATACATTCAATCTATT+TGG	+	tig0043435:3886-3905	Msa1463570:intron	20.0%
!!	ATTTGCACTTATTGATAAAT+AGG	+	tig0043435:4190-4209	Msa1463570:intron	20.0%
!!	TTGATAAATAGGTAAAAGAA+AGG	+	tig0043435:4201-4220	Msa1463570:intron	20.0%
!!	TGATAAATAGGTAAAAGAAA+GGG	+	tig0043435:4202-4221	Msa1463570:intron	20.0%
!!	TGATAATATATGTAGTGAAT+TGG	+	tig0043435:4544-4563	Msa1463570:intron	20.0%
!!!	TAGTTTTTTTTGTTATGTTG+TGG	+	tig0043435:4744-4763	Msa1463570:intron	20.0%
!!!	TACAAGTACAATTTTGTATT+GGG	+	tig0043435:4880-4899	Msa1463570:three_prime_UTR	20.0%
!!!	TTTATATTTTGTTGCCATTT+TGG	+	tig0043435:4903-4922	Msa1463570:three_prime_UTR	20.0%
!!!	GAATAGATGTTGTTTTTGTT+CGG	+	tig0043435:3141-3160	Msa1463570:intron	25.0%
!!!	ACTTGATTAAGATTTTAGAG+TGG	+	tig0043435:3205-3224	Msa1463570:intron	25.0%
!	ATTAAAATGCCCAATTTACT+TGG	+	tig0043435:3443-3462	Msa1463570:intron	25.0%
!	TTAAAATGCCCAATTTACTT+GGG	+	tig0043435:3444-3463	Msa1463570:intron	25.0%
!	TGATTGTGTTAATTGTTGAT+TGG	+	tig0043435:3530-3549	Msa1463570:intron	25.0%
!!	AAAGTGTTTAGATACTTACT+GGG	-	tig0043435:4712-4731	None:intergenic	25.0%
!!!	AAAAGTGTTTAGATACTTAC+TGG	-	tig0043435:4713-4732	None:intergenic	25.0%
!!	ATCTAAACACTTTTGTTACT+TGG	+	tig0043435:4719-4738	Msa1463570:intron	25.0%
!!	GTACAAGTACAATTTTGTAT+TGG	+	tig0043435:4879-4898	Msa1463570:three_prime_UTR	25.0%
!	AAAGGAAGGAATTTCATAAT+TGG	-	tig0043435:4975-4994	None:intergenic	25.0%
!!!	GAATAGATGTTGTTTTTGTT+CGG	+	tig0043435:3141-3160	Msa1463570:intron	25.0%
!!!	ACTTGATTAAGATTTTAGAG+TGG	+	tig0043435:3205-3224	Msa1463570:intron	25.0%
!	ATTAAAATGCCCAATTTACT+TGG	+	tig0043435:3443-3462	Msa1463570:intron	25.0%
!	TTAAAATGCCCAATTTACTT+GGG	+	tig0043435:3444-3463	Msa1463570:intron	25.0%
!	TGATTGTGTTAATTGTTGAT+TGG	+	tig0043435:3530-3549	Msa1463570:intron	25.0%
!!	AAAGTGTTTAGATACTTACT+GGG	-	tig0043435:4712-4731	None:intergenic	25.0%
!!!	AAAAGTGTTTAGATACTTAC+TGG	-	tig0043435:4713-4732	None:intergenic	25.0%
!!	ATCTAAACACTTTTGTTACT+TGG	+	tig0043435:4719-4738	Msa1463570:intron	25.0%
!!	GTACAAGTACAATTTTGTAT+TGG	+	tig0043435:4879-4898	Msa1463570:three_prime_UTR	25.0%
!	AAAGGAAGGAATTTCATAAT+TGG	-	tig0043435:4975-4994	None:intergenic	25.0%
	AGATTTCATTGCACTCATTA+GGG	-	tig0043435:2963-2982	None:intergenic	30.0%
!!	TGTTTTTGTTCGGAAATGTA+AGG	+	tig0043435:3151-3170	Msa1463570:intron	30.0%
!!!	ATGTAAGGTGTGTTGTTTTA+TGG	+	tig0043435:3166-3185	Msa1463570:intron	30.0%
!!	TAGAGTGGATTTAGTTGTTT+TGG	+	tig0043435:3220-3239	Msa1463570:intron	30.0%
!!!	GACTCATAAGCTAGTTTTAA+GGG	+	tig0043435:3273-3292	Msa1463570:intron	30.0%
!	ATTTTTGTGCCTTTATGAAC+TGG	+	tig0043435:3327-3346	Msa1463570:intron	30.0%
!	TTTTTGTGCCTTTATGAACT+GGG	+	tig0043435:3328-3347	Msa1463570:intron	30.0%
!	AGCCTTTTCACTGAAAAAAT+TGG	+	tig0043435:3362-3381	Msa1463570:intron	30.0%
!	GCCTTTTCACTGAAAAAATT+GGG	+	tig0043435:3363-3382	Msa1463570:intron	30.0%
!	CCTTTTCACTGAAAAAATTG+GGG	+	tig0043435:3364-3383	Msa1463570:intron	30.0%
!	GAAAAAATTGGGGCTTTTAT+TGG	+	tig0043435:3374-3393	Msa1463570:intron	30.0%
	TCTCCACTAAGTTCATATTA+GGG	-	tig0043435:3424-3443	None:intergenic	30.0%
	ATCTCCACTAAGTTCATATT+AGG	-	tig0043435:3425-3444	None:intergenic	30.0%
	TAAAATGCCCAATTTACTTG+GGG	+	tig0043435:3445-3464	Msa1463570:intron	30.0%
	TGTATTTCACTGATCATATG+TGG	+	tig0043435:3564-3583	Msa1463570:intron	30.0%
	TCAGTTGTGTAGAATATTGT+AGG	+	tig0043435:4057-4076	Msa1463570:intron	30.0%
	GTATCATGATATGTACATGA+AGG	+	tig0043435:4333-4352	Msa1463570:CDS	30.0%
!!	CCTATACATTTTAAAAGGCA+GGG	-	tig0043435:4626-4645	None:intergenic	30.0%
!!!	CCTGCCTTTTAAAATGTATA+GGG	+	tig0043435:4624-4643	Msa1463570:intron	30.0%
!	TGGACCCTATACATTTTAAA+AGG	-	tig0043435:4631-4650	None:intergenic	30.0%
!!!	TTTTAAAATGTATAGGGTCC+AGG	+	tig0043435:4630-4649	Msa1463570:intron	30.0%
	TACTTCTTGGATTTCTTTGA+TGG	-	tig0043435:4795-4814	None:intergenic	30.0%
	TGGATACTTGATTTACTTCT+TGG	-	tig0043435:4808-4827	None:intergenic	30.0%
!!!	ATTTTGTTGCCATTTTGGTA+TGG	+	tig0043435:4908-4927	Msa1463570:three_prime_UTR	30.0%
	AGATTTCATTGCACTCATTA+GGG	-	tig0043435:2963-2982	None:intergenic	30.0%
!!	TGTTTTTGTTCGGAAATGTA+AGG	+	tig0043435:3151-3170	Msa1463570:intron	30.0%
!!!	ATGTAAGGTGTGTTGTTTTA+TGG	+	tig0043435:3166-3185	Msa1463570:intron	30.0%
!!	TAGAGTGGATTTAGTTGTTT+TGG	+	tig0043435:3220-3239	Msa1463570:intron	30.0%
!!!	GACTCATAAGCTAGTTTTAA+GGG	+	tig0043435:3273-3292	Msa1463570:intron	30.0%
!	ATTTTTGTGCCTTTATGAAC+TGG	+	tig0043435:3327-3346	Msa1463570:intron	30.0%
!	TTTTTGTGCCTTTATGAACT+GGG	+	tig0043435:3328-3347	Msa1463570:intron	30.0%
!	AGCCTTTTCACTGAAAAAAT+TGG	+	tig0043435:3362-3381	Msa1463570:intron	30.0%
!	GCCTTTTCACTGAAAAAATT+GGG	+	tig0043435:3363-3382	Msa1463570:intron	30.0%
!	CCTTTTCACTGAAAAAATTG+GGG	+	tig0043435:3364-3383	Msa1463570:intron	30.0%
!	GAAAAAATTGGGGCTTTTAT+TGG	+	tig0043435:3374-3393	Msa1463570:intron	30.0%
	TCTCCACTAAGTTCATATTA+GGG	-	tig0043435:3424-3443	None:intergenic	30.0%
	ATCTCCACTAAGTTCATATT+AGG	-	tig0043435:3425-3444	None:intergenic	30.0%
	TAAAATGCCCAATTTACTTG+GGG	+	tig0043435:3445-3464	Msa1463570:intron	30.0%
	TGTATTTCACTGATCATATG+TGG	+	tig0043435:3564-3583	Msa1463570:intron	30.0%
	TCAGTTGTGTAGAATATTGT+AGG	+	tig0043435:4057-4076	Msa1463570:intron	30.0%
	GTATCATGATATGTACATGA+AGG	+	tig0043435:4333-4352	Msa1463570:CDS	30.0%
!!	CCTATACATTTTAAAAGGCA+GGG	-	tig0043435:4626-4645	None:intergenic	30.0%
!!!	CCTGCCTTTTAAAATGTATA+GGG	+	tig0043435:4624-4643	Msa1463570:intron	30.0%
!	TGGACCCTATACATTTTAAA+AGG	-	tig0043435:4631-4650	None:intergenic	30.0%
!!!	TTTTAAAATGTATAGGGTCC+AGG	+	tig0043435:4630-4649	Msa1463570:intron	30.0%
	TACTTCTTGGATTTCTTTGA+TGG	-	tig0043435:4795-4814	None:intergenic	30.0%
	TGGATACTTGATTTACTTCT+TGG	-	tig0043435:4808-4827	None:intergenic	30.0%
!!!	ATTTTGTTGCCATTTTGGTA+TGG	+	tig0043435:4908-4927	Msa1463570:three_prime_UTR	30.0%
	GAGATTTCATTGCACTCATT+AGG	-	tig0043435:2964-2983	None:intergenic	35.0%
!!!	GGACTCATAAGCTAGTTTTA+AGG	+	tig0043435:3272-3291	Msa1463570:intron	35.0%
!!!	CCCCAATTTTTTCAGTGAAA+AGG	-	tig0043435:3367-3386	None:intergenic	35.0%
	GTACCCTAATATGAACTTAG+TGG	+	tig0043435:3418-3437	Msa1463570:intron	35.0%
	AAAATGCCCAATTTACTTGG+GGG	+	tig0043435:3446-3465	Msa1463570:intron	35.0%
	ATTTCACTGATCATATGTGG+TGG	+	tig0043435:3567-3586	Msa1463570:intron	35.0%
	TTTCACTGATCATATGTGGT+GGG	+	tig0043435:3568-3587	Msa1463570:intron	35.0%
!	TAACCAACTTCCTGATGTTT+TGG	-	tig0043435:3633-3652	None:intergenic	35.0%
!	AAACATCAGGAAGTTGGTTA+AGG	+	tig0043435:3633-3652	Msa1463570:CDS	35.0%
	TTAAGGATGGCTTCATTATC+CGG	+	tig0043435:3650-3669	Msa1463570:CDS	35.0%
	CCATAATAATACTCGTGTGA+TGG	-	tig0043435:4004-4023	None:intergenic	35.0%
	CCATCACACGAGTATTATTA+TGG	+	tig0043435:4001-4020	Msa1463570:intron	35.0%
!	ACTTCACACGAGTATTTCTA+TGG	+	tig0043435:4122-4141	Msa1463570:intron	35.0%
!	TAAAAGAAAGGGTACAAGAG+AGG	+	tig0043435:4213-4232	Msa1463570:CDS	35.0%
	TGATATGTACATGAAGGTGA+AGG	+	tig0043435:4339-4358	Msa1463570:CDS	35.0%
	GATATGTACATGAAGGTGAA+GGG	+	tig0043435:4340-4359	Msa1463570:CDS	35.0%
	ACTTGTGAATACTCTCCATA+AGG	-	tig0043435:4390-4409	None:intergenic	35.0%
	GACATTATCTGATCAGTTTG+AGG	+	tig0043435:4435-4454	Msa1463570:CDS	35.0%
!!	TTTTAAAAGGCAGGGTGATA+TGG	-	tig0043435:4618-4637	None:intergenic	35.0%
!!!	CCCTGCCTTTTAAAATGTAT+AGG	+	tig0043435:4623-4642	Msa1463570:intron	35.0%
!!	CCCTATACATTTTAAAAGGC+AGG	-	tig0043435:4627-4646	None:intergenic	35.0%
	TTTAGATACTTACTGGGACT+GGG	-	tig0043435:4706-4725	None:intergenic	35.0%
	GAAGTAAATCAAGTATCCAG+AGG	+	tig0043435:4809-4828	Msa1463570:exon	35.0%
	AAATGAAAATACTCGACCTC+TGG	-	tig0043435:4828-4847	None:intergenic	35.0%
!	GTGCATTTTCCATACCAAAA+TGG	-	tig0043435:4920-4939	None:intergenic	35.0%
	TTGGTATGGAAAATGCACTT+TGG	+	tig0043435:4922-4941	Msa1463570:three_prime_UTR	35.0%
	ATTCCTTCCTTTAATTCTCC+TGG	+	tig0043435:4983-5002	Msa1463570:three_prime_UTR	35.0%
	GAGATTTCATTGCACTCATT+AGG	-	tig0043435:2964-2983	None:intergenic	35.0%
!!!	GGACTCATAAGCTAGTTTTA+AGG	+	tig0043435:3272-3291	Msa1463570:intron	35.0%
!!!	CCCCAATTTTTTCAGTGAAA+AGG	-	tig0043435:3367-3386	None:intergenic	35.0%
	GTACCCTAATATGAACTTAG+TGG	+	tig0043435:3418-3437	Msa1463570:intron	35.0%
	AAAATGCCCAATTTACTTGG+GGG	+	tig0043435:3446-3465	Msa1463570:intron	35.0%
	ATTTCACTGATCATATGTGG+TGG	+	tig0043435:3567-3586	Msa1463570:intron	35.0%
	TTTCACTGATCATATGTGGT+GGG	+	tig0043435:3568-3587	Msa1463570:intron	35.0%
!	TAACCAACTTCCTGATGTTT+TGG	-	tig0043435:3633-3652	None:intergenic	35.0%
!	AAACATCAGGAAGTTGGTTA+AGG	+	tig0043435:3633-3652	Msa1463570:CDS	35.0%
	TTAAGGATGGCTTCATTATC+CGG	+	tig0043435:3650-3669	Msa1463570:CDS	35.0%
	CCATAATAATACTCGTGTGA+TGG	-	tig0043435:4004-4023	None:intergenic	35.0%
	CCATCACACGAGTATTATTA+TGG	+	tig0043435:4001-4020	Msa1463570:intron	35.0%
!	ACTTCACACGAGTATTTCTA+TGG	+	tig0043435:4122-4141	Msa1463570:intron	35.0%
!	TAAAAGAAAGGGTACAAGAG+AGG	+	tig0043435:4213-4232	Msa1463570:CDS	35.0%
	TGATATGTACATGAAGGTGA+AGG	+	tig0043435:4339-4358	Msa1463570:CDS	35.0%
	GATATGTACATGAAGGTGAA+GGG	+	tig0043435:4340-4359	Msa1463570:CDS	35.0%
	ACTTGTGAATACTCTCCATA+AGG	-	tig0043435:4390-4409	None:intergenic	35.0%
	GACATTATCTGATCAGTTTG+AGG	+	tig0043435:4435-4454	Msa1463570:CDS	35.0%
!!	TTTTAAAAGGCAGGGTGATA+TGG	-	tig0043435:4618-4637	None:intergenic	35.0%
!!!	CCCTGCCTTTTAAAATGTAT+AGG	+	tig0043435:4623-4642	Msa1463570:intron	35.0%
!!	CCCTATACATTTTAAAAGGC+AGG	-	tig0043435:4627-4646	None:intergenic	35.0%
	TTTAGATACTTACTGGGACT+GGG	-	tig0043435:4706-4725	None:intergenic	35.0%
	GAAGTAAATCAAGTATCCAG+AGG	+	tig0043435:4809-4828	Msa1463570:exon	35.0%
	AAATGAAAATACTCGACCTC+TGG	-	tig0043435:4828-4847	None:intergenic	35.0%
!	GTGCATTTTCCATACCAAAA+TGG	-	tig0043435:4920-4939	None:intergenic	35.0%
	TTGGTATGGAAAATGCACTT+TGG	+	tig0043435:4922-4941	Msa1463570:three_prime_UTR	35.0%
!	AACTAGGGTTAGTGAGAGAT+AGG	+	tig0043435:2792-2811	Msa1463570:five_prime_UTR	40.0%
	TGAGTGCAATGAAATCTCCA+TGG	+	tig0043435:2966-2985	Msa1463570:CDS	40.0%
	GTAGCAGTAGTTACGTGAAT+TGG	-	tig0043435:2992-3011	None:intergenic	40.0%
	TTGAGCATCCCAGTTCATAA+AGG	-	tig0043435:3339-3358	None:intergenic	40.0%
	TGAGAACCCCCAAGTAAATT+GGG	-	tig0043435:3455-3474	None:intergenic	40.0%
	ATGAGAACCCCCAAGTAAAT+TGG	-	tig0043435:3456-3475	None:intergenic	40.0%
	CCAACCAAACCATTTATCAC+AGG	-	tig0043435:3596-3615	None:intergenic	40.0%
!!	CCTGTGATAAATGGTTTGGT+TGG	+	tig0043435:3593-3612	Msa1463570:intron	40.0%
!	ATCAGGAAGTTGGTTAAGGA+TGG	+	tig0043435:3637-3656	Msa1463570:CDS	40.0%
!	AGTGAATCTTAGTTGGCTTC+CGG	-	tig0043435:3672-3691	None:intergenic	40.0%
	TCTATGGTACTTGCACTATC+AGG	+	tig0043435:4138-4157	Msa1463570:intron	40.0%
!!	TCATCCAAAGGATTTTGGTG+GGG	-	tig0043435:4246-4265	None:intergenic	40.0%
!!	CTCATCCAAAGGATTTTGGT+GGG	-	tig0043435:4247-4266	None:intergenic	40.0%
	TGTCAATCTTCTTTGCCTCT+CGG	-	tig0043435:4306-4325	None:intergenic	40.0%
	CAAGAACAAGAGAGTCCTTA+TGG	+	tig0043435:4372-4391	Msa1463570:CDS	40.0%
	GTTTAGATACTTACTGGGAC+TGG	-	tig0043435:4707-4726	None:intergenic	40.0%
!	AACTAGGGTTAGTGAGAGAT+AGG	+	tig0043435:2792-2811	Msa1463570:five_prime_UTR	40.0%
	TGAGTGCAATGAAATCTCCA+TGG	+	tig0043435:2966-2985	Msa1463570:CDS	40.0%
	GTAGCAGTAGTTACGTGAAT+TGG	-	tig0043435:2992-3011	None:intergenic	40.0%
	TTGAGCATCCCAGTTCATAA+AGG	-	tig0043435:3339-3358	None:intergenic	40.0%
	TGAGAACCCCCAAGTAAATT+GGG	-	tig0043435:3455-3474	None:intergenic	40.0%
	ATGAGAACCCCCAAGTAAAT+TGG	-	tig0043435:3456-3475	None:intergenic	40.0%
	CCAACCAAACCATTTATCAC+AGG	-	tig0043435:3596-3615	None:intergenic	40.0%
!!	CCTGTGATAAATGGTTTGGT+TGG	+	tig0043435:3593-3612	Msa1463570:intron	40.0%
!	ATCAGGAAGTTGGTTAAGGA+TGG	+	tig0043435:3637-3656	Msa1463570:CDS	40.0%
!	AGTGAATCTTAGTTGGCTTC+CGG	-	tig0043435:3672-3691	None:intergenic	40.0%
	TCTATGGTACTTGCACTATC+AGG	+	tig0043435:4138-4157	Msa1463570:intron	40.0%
!!	TCATCCAAAGGATTTTGGTG+GGG	-	tig0043435:4246-4265	None:intergenic	40.0%
!!	CTCATCCAAAGGATTTTGGT+GGG	-	tig0043435:4247-4266	None:intergenic	40.0%
	TGTCAATCTTCTTTGCCTCT+CGG	-	tig0043435:4306-4325	None:intergenic	40.0%
	CAAGAACAAGAGAGTCCTTA+TGG	+	tig0043435:4372-4391	Msa1463570:CDS	40.0%
	GTTTAGATACTTACTGGGAC+TGG	-	tig0043435:4707-4726	None:intergenic	40.0%
	TGTCGCTCAAACTTCAGAAG+CGG	+	tig0043435:2890-2909	Msa1463570:CDS	45.0%
	GTAGTTACGTGAATTGGCCA+TGG	-	tig0043435:2986-3005	None:intergenic	45.0%
	GGAGCCTGTGATAAATGGTT+TGG	+	tig0043435:3589-3608	Msa1463570:intron	45.0%
!!	TTTGGTTGGTTTCTCGTTGC+AGG	+	tig0043435:3607-3626	Msa1463570:intron	45.0%
	AGGCCAAAACATCAGGAAGT+TGG	+	tig0043435:3627-3646	Msa1463570:intron	45.0%
	AAGGGACGTCATTCTGGATA+TGG	+	tig0043435:3730-3749	Msa1463570:CDS	45.0%
!	TCAGTTGTGCGAAGTGTTCT+AGG	+	tig0043435:3926-3945	Msa1463570:intron	45.0%
	GGTACTTGCACTATCAGGAT+AGG	+	tig0043435:4143-4162	Msa1463570:intron	45.0%
!	CCTCATCCAAAGGATTTTGG+TGG	-	tig0043435:4248-4267	None:intergenic	45.0%
	CCACCAAAATCCTTTGGATG+AGG	+	tig0043435:4245-4264	Msa1463570:CDS	45.0%
!	CCTCCTCATCCAAAGGATTT+TGG	-	tig0043435:4251-4270	None:intergenic	45.0%
	CCAAAATCCTTTGGATGAGG+AGG	+	tig0043435:4248-4267	Msa1463570:CDS	45.0%
!!	GGAGAGTATTCACAAGTCCA+AGG	+	tig0043435:4393-4412	Msa1463570:CDS	45.0%
!	TGATCAGTTTGAGGCCAAGA+GGG	+	tig0043435:4444-4463	Msa1463570:CDS	45.0%
	AGAATAAGGCTAGCAGGGAA+AGG	+	tig0043435:4470-4489	Msa1463570:CDS	45.0%
!!	CTAACCCTAGTTTTTGCTCC+AGG	-	tig0043435:2784-2803	None:intergenic	45.0%
	TGTCGCTCAAACTTCAGAAG+CGG	+	tig0043435:2890-2909	Msa1463570:CDS	45.0%
	GTAGTTACGTGAATTGGCCA+TGG	-	tig0043435:2986-3005	None:intergenic	45.0%
	GGAGCCTGTGATAAATGGTT+TGG	+	tig0043435:3589-3608	Msa1463570:intron	45.0%
!!	TTTGGTTGGTTTCTCGTTGC+AGG	+	tig0043435:3607-3626	Msa1463570:intron	45.0%
	AGGCCAAAACATCAGGAAGT+TGG	+	tig0043435:3627-3646	Msa1463570:intron	45.0%
	AAGGGACGTCATTCTGGATA+TGG	+	tig0043435:3730-3749	Msa1463570:CDS	45.0%
!	TCAGTTGTGCGAAGTGTTCT+AGG	+	tig0043435:3926-3945	Msa1463570:intron	45.0%
	GGTACTTGCACTATCAGGAT+AGG	+	tig0043435:4143-4162	Msa1463570:intron	45.0%
!	CCTCATCCAAAGGATTTTGG+TGG	-	tig0043435:4248-4267	None:intergenic	45.0%
	CCACCAAAATCCTTTGGATG+AGG	+	tig0043435:4245-4264	Msa1463570:CDS	45.0%
!	CCTCCTCATCCAAAGGATTT+TGG	-	tig0043435:4251-4270	None:intergenic	45.0%
	CCAAAATCCTTTGGATGAGG+AGG	+	tig0043435:4248-4267	Msa1463570:CDS	45.0%
!!	GGAGAGTATTCACAAGTCCA+AGG	+	tig0043435:4393-4412	Msa1463570:CDS	45.0%
!	TGATCAGTTTGAGGCCAAGA+GGG	+	tig0043435:4444-4463	Msa1463570:CDS	45.0%
	AGAATAAGGCTAGCAGGGAA+AGG	+	tig0043435:4470-4489	Msa1463570:CDS	45.0%
!	CTCTCTGGTTCGATAACCTG+CGG	-	tig0043435:2840-2859	None:intergenic	50.0%
!	ATCGAACCAGAGAGAGTGTG+AGG	+	tig0043435:2846-2865	Msa1463570:five_prime_UTR	50.0%
!	TCGAACCAGAGAGAGTGTGA+GGG	+	tig0043435:2847-2866	Msa1463570:five_prime_UTR	50.0%
	GGGAGAGAGAAAGAGAGAGA+TGG	+	tig0043435:2867-2886	Msa1463570:exon	50.0%
	TGGTGGGAGCCTGTGATAAA+TGG	+	tig0043435:3584-3603	Msa1463570:intron	50.0%
	TCGTTGCAGGCCAAAACATC+AGG	+	tig0043435:3620-3639	Msa1463570:intron	50.0%
	GAGCGGGAGTGAATCTTAGT+TGG	-	tig0043435:3679-3698	None:intergenic	50.0%
	TATGAAGGAGGCCAAGAGGA+AGG	+	tig0043435:3711-3730	Msa1463570:CDS	50.0%
	ATGAAGGAGGCCAAGAGGAA+GGG	+	tig0043435:3712-3731	Msa1463570:CDS	50.0%
	AGAATGACGTCCCTTCCTCT+TGG	-	tig0043435:3725-3744	None:intergenic	50.0%
	AAGAGGAAGGGACGTCATTC+TGG	+	tig0043435:3724-3743	Msa1463570:CDS	50.0%
!	GAAAGGGTACAAGAGAGGCT+AGG	+	tig0043435:4218-4237	Msa1463570:CDS	50.0%
!!	TTTGCTTCGCAAGTACCGAG+AGG	+	tig0043435:4288-4307	Msa1463570:CDS	50.0%
	TCACAAGTCCAAGGCTGAGA+AGG	+	tig0043435:4402-4421	Msa1463570:CDS	50.0%
!	CTGATCAGTTTGAGGCCAAG+AGG	+	tig0043435:4443-4462	Msa1463570:CDS	50.0%
!!	AGCCTTATTCTTCGCCCTCT+TGG	-	tig0043435:4461-4480	None:intergenic	50.0%
	GGCGAAGAATAAGGCTAGCA+GGG	+	tig0043435:4465-4484	Msa1463570:CDS	50.0%
	TGTATAGGGTCCAGGAGAGA+AGG	+	tig0043435:4638-4657	Msa1463570:intron	50.0%
!	CTCTCTGGTTCGATAACCTG+CGG	-	tig0043435:2840-2859	None:intergenic	50.0%
!	ATCGAACCAGAGAGAGTGTG+AGG	+	tig0043435:2846-2865	Msa1463570:five_prime_UTR	50.0%
!	TCGAACCAGAGAGAGTGTGA+GGG	+	tig0043435:2847-2866	Msa1463570:five_prime_UTR	50.0%
	GGGAGAGAGAAAGAGAGAGA+TGG	+	tig0043435:2867-2886	Msa1463570:exon	50.0%
	TGGTGGGAGCCTGTGATAAA+TGG	+	tig0043435:3584-3603	Msa1463570:intron	50.0%
	TCGTTGCAGGCCAAAACATC+AGG	+	tig0043435:3620-3639	Msa1463570:intron	50.0%
	GAGCGGGAGTGAATCTTAGT+TGG	-	tig0043435:3679-3698	None:intergenic	50.0%
	TATGAAGGAGGCCAAGAGGA+AGG	+	tig0043435:3711-3730	Msa1463570:CDS	50.0%
	ATGAAGGAGGCCAAGAGGAA+GGG	+	tig0043435:3712-3731	Msa1463570:CDS	50.0%
	AGAATGACGTCCCTTCCTCT+TGG	-	tig0043435:3725-3744	None:intergenic	50.0%
	AAGAGGAAGGGACGTCATTC+TGG	+	tig0043435:3724-3743	Msa1463570:CDS	50.0%
!	GAAAGGGTACAAGAGAGGCT+AGG	+	tig0043435:4218-4237	Msa1463570:CDS	50.0%
!!	TTTGCTTCGCAAGTACCGAG+AGG	+	tig0043435:4288-4307	Msa1463570:CDS	50.0%
	TCACAAGTCCAAGGCTGAGA+AGG	+	tig0043435:4402-4421	Msa1463570:CDS	50.0%
!	CTGATCAGTTTGAGGCCAAG+AGG	+	tig0043435:4443-4462	Msa1463570:CDS	50.0%
!!	AGCCTTATTCTTCGCCCTCT+TGG	-	tig0043435:4461-4480	None:intergenic	50.0%
	GGCGAAGAATAAGGCTAGCA+GGG	+	tig0043435:4465-4484	Msa1463570:CDS	50.0%
	TGTATAGGGTCCAGGAGAGA+AGG	+	tig0043435:4638-4657	Msa1463570:intron	50.0%
	ATATAGCCTCCTTCCACCGC+AGG	+	tig0043435:2821-2840	Msa1463570:five_prime_UTR	55.0%
	GTTCGATAACCTGCGGTGGA+AGG	-	tig0043435:2833-2852	None:intergenic	55.0%
!	TCTGGTTCGATAACCTGCGG+TGG	-	tig0043435:2837-2856	None:intergenic	55.0%
	TCTCTCCCTCACACTCTCTC+TGG	-	tig0043435:2855-2874	None:intergenic	55.0%
	ACCACACTTGAGTACGCTGG+CGG	-	tig0043435:2920-2939	None:intergenic	55.0%
	ACGACCACACTTGAGTACGC+TGG	-	tig0043435:2923-2942	None:intergenic	55.0%
	AGCGTACTCAAGTGTGGTCG+TGG	+	tig0043435:2922-2941	Msa1463570:CDS	55.0%
	ACTCAAGTGTGGTCGTGGCA+AGG	+	tig0043435:2927-2946	Msa1463570:CDS	55.0%
	CTCCTTCATACGCCTAGCAC+GGG	-	tig0043435:3701-3720	None:intergenic	55.0%
	CCTCCTTCATACGCCTAGCA+CGG	-	tig0043435:3702-3721	None:intergenic	55.0%
	GGCTCCCCACCAAAATCCTT+TGG	+	tig0043435:4239-4258	Msa1463570:CDS	55.0%
	CACGCATCCTCCTCATCCAA+AGG	-	tig0043435:4258-4277	None:intergenic	55.0%
	ACTTGCGAAGCAAACGCCTG+AGG	-	tig0043435:4282-4301	None:intergenic	55.0%
!	CTCTCTAGCCTTCTCAGCCT+TGG	-	tig0043435:4413-4432	None:intergenic	55.0%
	GGCCAAGAGGGCGAAGAATA+AGG	+	tig0043435:4456-4475	Msa1463570:CDS	55.0%
	GGGCGAAGAATAAGGCTAGC+AGG	+	tig0043435:4464-4483	Msa1463570:CDS	55.0%
!	AGCAAAGCGCTCTTCTCTGC+GGG	-	tig0043435:4503-4522	None:intergenic	55.0%
!	GAGCAAAGCGCTCTTCTCTG+CGG	-	tig0043435:4504-4523	None:intergenic	55.0%
	ATATAGCCTCCTTCCACCGC+AGG	+	tig0043435:2821-2840	Msa1463570:five_prime_UTR	55.0%
	GTTCGATAACCTGCGGTGGA+AGG	-	tig0043435:2833-2852	None:intergenic	55.0%
!	TCTGGTTCGATAACCTGCGG+TGG	-	tig0043435:2837-2856	None:intergenic	55.0%
	TCTCTCCCTCACACTCTCTC+TGG	-	tig0043435:2855-2874	None:intergenic	55.0%
	ACCACACTTGAGTACGCTGG+CGG	-	tig0043435:2920-2939	None:intergenic	55.0%
	ACGACCACACTTGAGTACGC+TGG	-	tig0043435:2923-2942	None:intergenic	55.0%
	AGCGTACTCAAGTGTGGTCG+TGG	+	tig0043435:2922-2941	Msa1463570:CDS	55.0%
	ACTCAAGTGTGGTCGTGGCA+AGG	+	tig0043435:2927-2946	Msa1463570:CDS	55.0%
	CTCCTTCATACGCCTAGCAC+GGG	-	tig0043435:3701-3720	None:intergenic	55.0%
	CCTCCTTCATACGCCTAGCA+CGG	-	tig0043435:3702-3721	None:intergenic	55.0%
	GGCTCCCCACCAAAATCCTT+TGG	+	tig0043435:4239-4258	Msa1463570:CDS	55.0%
	CACGCATCCTCCTCATCCAA+AGG	-	tig0043435:4258-4277	None:intergenic	55.0%
	ACTTGCGAAGCAAACGCCTG+AGG	-	tig0043435:4282-4301	None:intergenic	55.0%
!	CTCTCTAGCCTTCTCAGCCT+TGG	-	tig0043435:4413-4432	None:intergenic	55.0%
	GGCCAAGAGGGCGAAGAATA+AGG	+	tig0043435:4456-4475	Msa1463570:CDS	55.0%
	GGGCGAAGAATAAGGCTAGC+AGG	+	tig0043435:4464-4483	Msa1463570:CDS	55.0%
!	AGCAAAGCGCTCTTCTCTGC+GGG	-	tig0043435:4503-4522	None:intergenic	55.0%
!	GAGCAAAGCGCTCTTCTCTG+CGG	-	tig0043435:4504-4523	None:intergenic	55.0%
	CGATAACCTGCGGTGGAAGG+AGG	-	tig0043435:2830-2849	None:intergenic	60.0%
	AGTGTGGTCGTGGCAAGGTC+TGG	+	tig0043435:2932-2951	Msa1463570:CDS	60.0%
	TCATACGCCTAGCACGGGAG+CGG	-	tig0043435:3696-3715	None:intergenic	60.0%
	CTCCCGTGCTAGGCGTATGA+AGG	+	tig0043435:3696-3715	Msa1463570:CDS	60.0%
	CCGTGCTAGGCGTATGAAGG+AGG	+	tig0043435:3699-3718	Msa1463570:CDS	60.0%
	GGCGTATGAAGGAGGCCAAG+AGG	+	tig0043435:3707-3726	Msa1463570:CDS	60.0%
	TGAGGAGGATGCGTGTCCTC+AGG	+	tig0043435:4263-4282	Msa1463570:CDS	60.0%
	GCTGCAGGAACCTTCTCTCC+TGG	-	tig0043435:4651-4670	None:intergenic	60.0%
!	GGTTGCTGTTGCAGCTGGTG+CGG	-	tig0043435:4685-4704	None:intergenic	60.0%
!	GACTGGGTTGCTGTTGCAGC+TGG	-	tig0043435:4690-4709	None:intergenic	60.0%
	CGATAACCTGCGGTGGAAGG+AGG	-	tig0043435:2830-2849	None:intergenic	60.0%
	AGTGTGGTCGTGGCAAGGTC+TGG	+	tig0043435:2932-2951	Msa1463570:CDS	60.0%
	TCATACGCCTAGCACGGGAG+CGG	-	tig0043435:3696-3715	None:intergenic	60.0%
	CTCCCGTGCTAGGCGTATGA+AGG	+	tig0043435:3696-3715	Msa1463570:CDS	60.0%
	CCGTGCTAGGCGTATGAAGG+AGG	+	tig0043435:3699-3718	Msa1463570:CDS	60.0%
	GGCGTATGAAGGAGGCCAAG+AGG	+	tig0043435:3707-3726	Msa1463570:CDS	60.0%
	TGAGGAGGATGCGTGTCCTC+AGG	+	tig0043435:4263-4282	Msa1463570:CDS	60.0%
	GCTGCAGGAACCTTCTCTCC+TGG	-	tig0043435:4651-4670	None:intergenic	60.0%
!	GGTTGCTGTTGCAGCTGGTG+CGG	-	tig0043435:4685-4704	None:intergenic	60.0%
!	GACTGGGTTGCTGTTGCAGC+TGG	-	tig0043435:4690-4709	None:intergenic	60.0%
	GCCGCCAGCGTACTCAAGTG+TGG	+	tig0043435:2916-2935	Msa1463570:CDS	65.0%
	TGGTCGTGGCAAGGTCTGGC+TGG	+	tig0043435:2936-2955	Msa1463570:CDS	65.0%
	TTCACTCCCGCTCCCGTGCT+AGG	+	tig0043435:3686-3705	Msa1463570:CDS	65.0%
	CATACGCCTAGCACGGGAGC+GGG	-	tig0043435:3695-3714	None:intergenic	65.0%
	GCCGCCAGCGTACTCAAGTG+TGG	+	tig0043435:2916-2935	Msa1463570:CDS	65.0%
	TGGTCGTGGCAAGGTCTGGC+TGG	+	tig0043435:2936-2955	Msa1463570:CDS	65.0%
	TTCACTCCCGCTCCCGTGCT+AGG	+	tig0043435:3686-3705	Msa1463570:CDS	65.0%
	CATACGCCTAGCACGGGAGC+GGG	-	tig0043435:3695-3714	None:intergenic	65.0%
	GCTGTTGCAGCTGGTGCGGC+TGG	-	tig0043435:4681-4700	None:intergenic	70.0%
	GCTGTTGCAGCTGGTGCGGC+TGG	-	tig0043435:4681-4700	None:intergenic	70.0%
!!	GCGGCTGGTGCTGCAGCTGC+AGG	-	tig0043435:4666-4685	None:intergenic	75.0%
!!	GCGGCTGGTGCTGCAGCTGC+AGG	-	tig0043435:4666-4685	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
tig0043435	gene	2784	5003	2784	ID=Msa1463570;Name=Msa1463570
tig0043435	mRNA	2784	5003	2784	ID=Msa1463570-mRNA-1;Parent=Msa1463570;Name=Msa1463570-mRNA-1;_AED=0.00;_eAED=0.00;_QI=102\|1\|1\|1\|1\|1\|5\|188\|213
tig0043435	exon	2784	2997	2784	ID=Msa1463570-mRNA-1:exon:24112;Parent=Msa1463570-mRNA-1
tig0043435	exon	3629	3751	3629	ID=Msa1463570-mRNA-1:exon:24113;Parent=Msa1463570-mRNA-1
tig0043435	exon	4212	4525	4212	ID=Msa1463570-mRNA-1:exon:24114;Parent=Msa1463570-mRNA-1
tig0043435	exon	4645	4712	4645	ID=Msa1463570-mRNA-1:exon:24115;Parent=Msa1463570-mRNA-1
tig0043435	exon	4791	5003	4791	ID=Msa1463570-mRNA-1:exon:24116;Parent=Msa1463570-mRNA-1
tig0043435	five_prime_UTR	2784	2885	2784	ID=Msa1463570-mRNA-1:five_prime_utr;Parent=Msa1463570-mRNA-1
tig0043435	CDS	2886	2997	2886	ID=Msa1463570-mRNA-1:cds;Parent=Msa1463570-mRNA-1
tig0043435	CDS	3629	3751	3629	ID=Msa1463570-mRNA-1:cds;Parent=Msa1463570-mRNA-1
tig0043435	CDS	4212	4525	4212	ID=Msa1463570-mRNA-1:cds;Parent=Msa1463570-mRNA-1
tig0043435	CDS	4645	4712	4645	ID=Msa1463570-mRNA-1:cds;Parent=Msa1463570-mRNA-1
tig0043435	CDS	4791	4815	4791	ID=Msa1463570-mRNA-1:cds;Parent=Msa1463570-mRNA-1
tig0043435	three_prime_UTR	4816	5003	4816	ID=Msa1463570-mRNA-1:three_prime_utr;Parent=Msa1463570-mRNA-1

Gene Sequence

>Msa1463570

ATGGTGTCGCTCAAACTTCAGAAGCGGCTCGCCGCCAGCGTACTCAAGTGTGGTCGTGGCAAGGTCTGGCTGGACCCTAATGAGTGCAATGAAATCTCCATGGCCAATTCACGCCAAAACATCAGGAAGTTGGTTAAGGATGGCTTCATTATCCGGAAGCCAACTAAGATTCACTCCCGCTCCCGTGCTAGGCGTATGAAGGAGGCCAAGAGGAAGGGACGTCATTCTGGATATGGTAAAAGAAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGATGAGGAGGATGCGTGTCCTCAGGCGTTTGCTTCGCAAGTACCGAGAGGCAAAGAAGATTGACAAACATATGTATCATGATATGTACATGAAGGTGAAGGGAAATGTCTTCAAGAACAAGAGAGTCCTTATGGAGAGTATTCACAAGTCCAAGGCTGAGAAGGCTAGAGAGAAGACATTATCTGATCAGTTTGAGGCCAAGAGGGCGAAGAATAAGGCTAGCAGGGAAAGGAAGCATGCCCGCAGAGAAGAGCGCTTTGCTCAAGGTCCAGGAGAGAAGGTTCCTGCAGCTGCAGCACCAGCCGCACCAGCTGCAACAGCAACCCAGTCCCAACCATCAAAGAAATCCAAGAAGTAA

Protein sequence

>Msa1463570

MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERFAQGPGEKVPAAAAPAAPAATATQSQPSKKSKK*