AlfalfaGEDB | Msa0128750

M. sativa cultivar zhongmu-4 / Msa0128750

KEGG: K02885
GO: -
PFAM: PF01280.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0128750	sp\|Q9LUQ6\|RL192_ARATH	90.566	106	10	0	1	106	1	106	1.60e-65	200

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0128750	A0A6J1DJQ5	100.000	95	0	0	1	95	1	95	4.21e-62	198

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0027590	Msa0128750	0.807904	4.024758e-50	-8.615850e-47
Msa0087910	Msa0128750	0.809770	1.605299e-50	-8.615850e-47
Msa0128330	Msa0128750	0.897270	1.654715e-76	-8.615850e-47
Msa0128750	Msa0134580	0.805263	1.452651e-49	-8.615850e-47
Msa0128750	Msa0167860	0.824660	7.157633e-54	-8.615850e-47
Msa0128750	Msa0174580	0.903344	3.821509e-79	-8.615850e-47
Msa0128750	Msa0191450	0.840651	7.647825e-58	-8.615850e-47
Msa0128750	Msa0191550	0.834665	2.628646e-56	-8.615850e-47
Msa0128750	Msa0194940	0.853610	2.133304e-61	-8.615850e-47
Msa0128750	Msa0315430	0.824260	8.886131e-54	-8.615850e-47
Msa0128750	Msa0341880	0.813734	2.203301e-51	-8.615850e-47
Msa0128750	Msa0369410	0.813992	1.932753e-51	-8.615850e-47
Msa0128750	Msa0426250	0.811978	5.341239e-51	-8.615850e-47
Msa0128750	Msa0436750	0.814449	1.531822e-51	-8.615850e-47
Msa0128750	Msa0463520	0.803175	3.952512e-49	-8.615850e-47
Msa0128750	Msa0471880	0.838049	3.622166e-57	-8.615850e-47
Msa0128750	Msa0473570	0.823745	1.173734e-53	-8.615850e-47
Msa0128750	Msa0481520	0.855325	6.805703e-62	-8.615850e-47
Msa0128750	Msa0481800	0.809777	1.600301e-50	-8.615850e-47
Msa0128750	Msa0481850	0.843914	1.044987e-58	-8.615850e-47
Msa0128750	Msa0484730	0.834025	3.804334e-56	-8.615850e-47
Msa0128750	Msa0529900	0.845075	5.089887e-59	-8.615850e-47
Msa0128750	Msa0573550	0.805197	1.499254e-49	-8.615850e-47
Msa0128750	Msa0579830	0.829768	4.278966e-55	-8.615850e-47
Msa0128750	Msa0649890	0.817089	3.950912e-52	-8.615850e-47
Msa0128750	Msa0694400	0.832888	7.311001e-56	-8.615850e-47
Msa0128750	Msa0712610	0.806434	8.241575e-50	-8.615850e-47
Msa0128750	Msa0752910	0.847842	8.950086e-60	-8.615850e-47
Msa0128750	Msa0758420	0.809036	2.307355e-50	-8.615850e-47
Msa0128750	Msa0792420	0.811809	5.812946e-51	-8.615850e-47
Msa0128750	Msa0799830	0.816008	6.898410e-52	-8.615850e-47
Msa0128750	Msa0822580	0.800204	1.608641e-48	-8.615850e-47
Msa0128750	Msa0838070	0.805461	1.320457e-49	-8.615850e-47
Msa0128750	Msa1037290	0.860353	2.192054e-63	-8.615850e-47
Msa0128750	Msa1078870	0.847026	1.499794e-59	-8.615850e-47
Msa0128750	Msa1078980	0.803138	4.021890e-49	-8.615850e-47
Msa0128750	Msa1080350	0.811741	6.014468e-51	-8.615850e-47
Msa0128750	Msa1125860	0.801569	8.465048e-49	-8.615850e-47
Msa0128750	Msa1126060	0.805759	1.143096e-49	-8.615850e-47
Msa0128750	Msa1126520	0.825764	3.923048e-54	-8.615850e-47
Msa0128750	Msa1164150	0.867277	1.540629e-65	-8.615850e-47
Msa0128750	Msa1167540	0.821032	5.007617e-53	-8.615850e-47
Msa0128750	Msa1169180	0.824049	9.963303e-54	-8.615850e-47
Msa0128750	Msa1208330	0.810890	9.203984e-51	-8.615850e-47
Msa0128750	Msa1258540	0.849451	3.207111e-60	-8.615850e-47
Msa0128750	Msa1295150	0.845252	4.560864e-59	-8.615850e-47
Msa0128750	Msa1311400	0.847938	8.422585e-60	-8.615850e-47
Msa0128750	Msa1351020	0.806029	1.003291e-49	-8.615850e-47
Msa0128750	Msa1368920	0.859382	4.300481e-63	-8.615850e-47
Msa0128750	Msa1374480	0.841587	4.341681e-58	-8.615850e-47
Msa0128750	Msa1385480	0.820813	5.624209e-53	-8.615850e-47
Msa0128750	Msa1397100	0.839085	1.955916e-57	-8.615850e-47
Msa0128750	Msa1403910	0.837550	4.864801e-57	-8.615850e-47
Msa0128750	Msa1426120	0.827064	1.922888e-54	-8.615850e-47
Msa0128750	Msa1432310	0.800340	1.509302e-48	-8.615850e-47
Msa0128750	Msa1446410	0.814782	1.293009e-51	-8.615850e-47
Msa0128750	Msa1463570	0.897680	1.111156e-76	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0128750	MtrunA17_Chr1g0195141	100.000	95	0	0	1	95	1	95	2.01e-65	197
Msa0128750	MtrunA17_Chr7g0269621	97.895	95	2	0	1	95	1	95	3.65e-64	194

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0128750	AT3G16780.1	90.566	106	10	1	106	1	106	1.62e-66	200
Msa0128750	AT1G02780.1	90.526	95	9	1	95	1	95	7.06e-59	181
Msa0128750	AT4G02230.1	88.421	95	11	1	95	1	95	1.24e-56	175

Find 92 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGGATACTTGATTTACTTCT+TGG	0.183729	1_3:-58624216	None:intergenic
CCTCCTCATCCAAAGGATTT+TGG	0.205932	1_3:-58623661	None:intergenic
TACTTCTTGGATTTCTTTGA+TGG	0.223836	1_3:-58624203	None:intergenic
AAAGGAAGGAATTTCATAAT+TGG	0.234687	1_3:-58624383	None:intergenic
TAACCAACTTCCTGATGTTT+TGG	0.238015	1_3:-58623055	None:intergenic
GAGATTTCATTGCACTCATT+AGG	0.315100	1_3:-58622327	None:intergenic
GCTGTTGCAGCTGGTGCGGC+TGG	0.322299	1_3:-58624088	None:intergenic
CTCTCTAGCCTTCTCAGCCT+TGG	0.342124	1_3:-58623821	None:intergenic
GCGGCTGGTGCTGCAGCTGC+AGG	0.351870	1_3:-58624073	None:intergenic
GGCCAAGAGGGCGAAGAATA+AGG	0.353398	1_3:+58623867	Msa0128750:three_prime_UTR
GCCTGGGTTGCTGTTGCAGC+TGG	0.355161	1_3:-58624097	None:intergenic
CAAGAACAAGAGAGTCCTTA+TGG	0.366020	1_3:+58623783	Msa0128750:three_prime_UTR
GCAGGCATGATAGGAATTAA+AGG	0.371452	1_3:-58624401	None:intergenic
AGATTTCATTGCACTCATTA+GGG	0.375558	1_3:-58622326	None:intergenic
AAGGGACGTCATTCTGGATA+TGG	0.390520	1_3:+58623155	Msa0128750:CDS
AAGAGGAAGGGACGTCATTC+TGG	0.393970	1_3:+58623149	Msa0128750:CDS
GGCTCCCCACCAAAATCCTT+TGG	0.400346	1_3:+58623652	Msa0128750:CDS
AGTGAATCTTAGTTGGCTTC+CGG	0.400791	1_3:-58623094	None:intergenic
AGCCTTATTCTTCGCCCTCT+TGG	0.400876	1_3:-58623869	None:intergenic
TGTCAATCTTCTTTGCCTCT+CGG	0.425253	1_3:-58623715	None:intergenic
TTAAGGATGGCTTCATTATC+CGG	0.428777	1_3:+58623075	Msa0128750:CDS
TTTAGATACTTACTGGGCCT+GGG	0.429299	1_3:-58624113	None:intergenic
AGTGTGGTCGTGGCAAGGTC+TGG	0.433202	1_3:+58622298	Msa0128750:CDS
AACTAGGGTTAGTGAGAGAT+AGG	0.436037	1_3:+58622156	Msa0128750:five_prime_UTR
TCGTTGCAGGCCAAAACATC+AGG	0.437194	1_3:+58623045	Msa0128750:intron
TCTCCCTCACACTCTCTCTC+TGG	0.449506	1_3:-58622216	None:intergenic
GTTTAGATACTTACTGGGCC+TGG	0.456156	1_3:-58624114	None:intergenic
GCTGCAGGAACCTTCTCTCC+TGG	0.459743	1_3:-58624058	None:intergenic
AAACATCAGGAAGTTGGTTA+AGG	0.466451	1_3:+58623058	Msa0128750:CDS
AGCAAAGCGCTCTTCTCTGC+GGG	0.467270	1_3:-58623911	None:intergenic
TTGATAAATAGGTAAAAGAA+AGG	0.468156	1_3:+58623614	Msa0128750:intron
GACATTATCTGATCAGTTTG+AGG	0.469564	1_3:+58623846	Msa0128750:three_prime_UTR
GTAGCAGTAGTTACGTGAAT+TGG	0.471557	1_3:-58622355	None:intergenic
GGGCGAAGAATAAGGCTAGC+AGG	0.473984	1_3:+58623875	Msa0128750:three_prime_UTR
TGAGGAGGATGCGTGTCCTC+AGG	0.478520	1_3:+58623676	Msa0128750:CDS
GAGCGGGAGTGAATCTTAGT+TGG	0.479570	1_3:-58623101	None:intergenic
AAATGAAAATACTCGACCTC+TGG	0.480180	1_3:-58624236	None:intergenic
TTCACTCCCGCTCCCGTGCT+AGG	0.486394	1_3:+58623111	Msa0128750:CDS
TGGTCGTGGCAAGGTCTGGC+TGG	0.492270	1_3:+58622302	Msa0128750:CDS
ACCAGCTGCAACAGCAACCC+AGG	0.499161	1_3:+58624096	Msa0128750:three_prime_UTR
AGCGTACTCAAGTGTGGTCG+TGG	0.503558	1_3:+58622288	Msa0128750:CDS
CTCCTTCATACGCCTAGCAC+GGG	0.507928	1_3:-58623123	None:intergenic
AGAATGACGTCCCTTCCTCT+TGG	0.519292	1_3:-58623147	None:intergenic
CTCCCGTGCTAGGCGTATGA+AGG	0.520929	1_3:+58623121	Msa0128750:CDS
CCTCCTTCATACGCCTAGCA+CGG	0.532368	1_3:-58623124	None:intergenic
ACTTGTGAATACTCTCCATA+AGG	0.533671	1_3:-58623798	None:intergenic
ATATAGCCTCCTTCCACCGC+AGG	0.537517	1_3:+58622185	Msa0128750:five_prime_UTR
AGGCCAAAACATCAGGAAGT+TGG	0.540880	1_3:+58623052	Msa0128750:intron
ATCAGGAAGTTGGTTAAGGA+TGG	0.541752	1_3:+58623062	Msa0128750:CDS
TCACAAGTCCAAGGCTGAGA+AGG	0.542917	1_3:+58623813	Msa0128750:three_prime_UTR
CATACGCCTAGCACGGGAGC+GGG	0.545913	1_3:-58623117	None:intergenic
CCACCAAAATCCTTTGGATG+AGG	0.555880	1_3:+58623658	Msa0128750:CDS
GTTCGATAACCTGCGGTGGA+AGG	0.557244	1_3:-58622194	None:intergenic
TATGAAGGAGGCCAAGAGGA+AGG	0.560584	1_3:+58623136	Msa0128750:CDS
TGATATGTACATGAAGGTGA+AGG	0.563752	1_3:+58623751	Msa0128750:exon
TGTATAGGGTCCAGGAGAGA+AGG	0.563890	1_3:+58624048	Msa0128750:intron
TGATAAATAGGTAAAAGAAA+GGG	0.567052	1_3:+58623615	Msa0128750:intron
TCATACGCCTAGCACGGGAG+CGG	0.568186	1_3:-58623118	None:intergenic
ACTCAAGTGTGGTCGTGGCA+AGG	0.568268	1_3:+58622293	Msa0128750:CDS
CCAAAATCCTTTGGATGAGG+AGG	0.569919	1_3:+58623661	Msa0128750:CDS
GGGAGAGAGAAAGAGAGAGA+TGG	0.573584	1_3:+58622233	Msa0128750:exon
CGATAACCTGCGGTGGAAGG+AGG	0.574079	1_3:-58622191	None:intergenic
GGCGAAGAATAAGGCTAGCA+GGG	0.575881	1_3:+58623876	Msa0128750:three_prime_UTR
AGAATAAGGCTAGCAGGGAA+AGG	0.589605	1_3:+58623881	Msa0128750:three_prime_UTR
CGAACCAGAGAGAGAGTGTG+AGG	0.589641	1_3:+58622212	Msa0128750:five_prime_UTR
GAGCAAAGCGCTCTTCTCTG+CGG	0.593895	1_3:-58623912	None:intergenic
TGATCAGTTTGAGGCCAAGA+GGG	0.598337	1_3:+58623855	Msa0128750:three_prime_UTR
TTGGTATGGAAAATGCACTT+TGG	0.600057	1_3:+58624333	Msa0128750:three_prime_UTR
CTCTCTGGTTCGATAACCTG+CGG	0.605800	1_3:-58622201	None:intergenic
CCGTGCTAGGCGTATGAAGG+AGG	0.607212	1_3:+58623124	Msa0128750:CDS
TAAAAGAAAGGGTACAAGAG+AGG	0.608223	1_3:+58623626	Msa0128750:CDS
CACGCATCCTCCTCATCCAA+AGG	0.610691	1_3:-58623668	None:intergenic
GAAAGGGTACAAGAGAGGCT+AGG	0.611551	1_3:+58623631	Msa0128750:CDS
ATGAAGGAGGCCAAGAGGAA+GGG	0.617125	1_3:+58623137	Msa0128750:CDS
GGAGAGTATTCACAAGTCCA+AGG	0.617146	1_3:+58623804	Msa0128750:three_prime_UTR
GGTTGCTGTTGCAGCTGGTG+CGG	0.620402	1_3:-58624092	None:intergenic
GCATGATAGGAATTAAAGGA+AGG	0.620920	1_3:-58624397	None:intergenic
TCTGGTTCGATAACCTGCGG+TGG	0.621365	1_3:-58622198	None:intergenic
GAACCAGAGAGAGAGTGTGA+GGG	0.622326	1_3:+58622213	Msa0128750:five_prime_UTR
GATATGTACATGAAGGTGAA+GGG	0.623119	1_3:+58623752	Msa0128750:exon
GCCGCCAGCGTACTCAAGTG+TGG	0.623938	1_3:+58622282	Msa0128750:CDS
CTGATCAGTTTGAGGCCAAG+AGG	0.627289	1_3:+58623854	Msa0128750:three_prime_UTR
GGCGTATGAAGGAGGCCAAG+AGG	0.634053	1_3:+58623132	Msa0128750:CDS
GTAGTTACGTGAATTGGCCA+TGG	0.639618	1_3:-58622349	None:intergenic
TGAGTGCAATGAAATCTCCA+TGG	0.652574	1_3:+58622332	Msa0128750:CDS
GAAGTAAATCAAGTATCCAG+AGG	0.666529	1_3:+58624220	Msa0128750:three_prime_UTR
TACTGCGAAGCAAACGCCTG+AGG	0.680784	1_3:-58623692	None:intergenic
ACGACCACACTTGAGTACGC+TGG	0.682599	1_3:-58622286	None:intergenic
GTATCATGATATGTACATGA+AGG	0.691105	1_3:+58623745	Msa0128750:CDS
ACCACACTTGAGTACGCTGG+CGG	0.695452	1_3:-58622283	None:intergenic
TGTCGCTCAAACTTCAGAAG+CGG	0.696714	1_3:+58622256	Msa0128750:CDS
GTTTGCTTCGCAGTACCGAG+AGG	0.702335	1_3:+58623700	Msa0128750:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TGTTAAAATATTTTAATTTC+AGG	+	chr1_3:58622677-58622696	Msa0128750:intron	10.0%
!!!	TGTTAAAATATTTTAATTTC+AGG	+	chr1_3:58622677-58622696	Msa0128750:intron	10.0%
!!	TAGGAAAAAAAAAAAAAACT+AGG	+	chr1_3:58622572-58622591	Msa0128750:intron	15.0%
!!	AGGAAAAAAAAAAAAAACTA+GGG	+	chr1_3:58622573-58622592	Msa0128750:intron	15.0%
!!	AATTCATATTAAAACTATCA+AGG	-	chr1_3:58623198-58623217	None:intergenic	15.0%
!!!	ATAGTTTTAATATGAATTGA+AGG	+	chr1_3:58623200-58623219	Msa0128750:intron	15.0%
!!	CATATATTATCAAAACATTA+TGG	-	chr1_3:58623947-58623966	None:intergenic	15.0%
!!	TAGGAAAAAAAAAAAAAACT+AGG	+	chr1_3:58622572-58622591	Msa0128750:intron	15.0%
!!	AGGAAAAAAAAAAAAAACTA+GGG	+	chr1_3:58622573-58622592	Msa0128750:intron	15.0%
!!	AATTCATATTAAAACTATCA+AGG	-	chr1_3:58623198-58623217	None:intergenic	15.0%
!!!	ATAGTTTTAATATGAATTGA+AGG	+	chr1_3:58623200-58623219	Msa0128750:intron	15.0%
!!	CATATATTATCAAAACATTA+TGG	-	chr1_3:58623947-58623966	None:intergenic	15.0%
!!	AAAATCATAACACAAAACAT+TGG	-	chr1_3:58622396-58622415	None:intergenic	20.0%
!!!	ACAACATTTCAATGTTTTTT+GGG	-	chr1_3:58622610-58622629	None:intergenic	20.0%
!!	TTCATAACAAAAATGAGTTA+AGG	-	chr1_3:58622928-58622947	None:intergenic	20.0%
!!	ATTTGCACTTATTGATAAAT+AGG	+	chr1_3:58623603-58623622	Msa0128750:intron	20.0%
!!	TTGATAAATAGGTAAAAGAA+AGG	+	chr1_3:58623614-58623633	Msa0128750:intron	20.0%
!!	TGATAAATAGGTAAAAGAAA+GGG	+	chr1_3:58623615-58623634	Msa0128750:intron	20.0%
!!	TGATAATATATGTAGTGAAT+TGG	+	chr1_3:58623955-58623974	Msa0128750:intron	20.0%
!!!	TAGTTTTTTATGTTATGTTG+TGG	+	chr1_3:58624154-58624173	Msa0128750:intron	20.0%
!!!	TACAAGTACAATTTTGTATT+GGG	+	chr1_3:58624291-58624310	Msa0128750:three_prime_UTR	20.0%
!!!	TTTATATTTTGTTGCCATTT+TGG	+	chr1_3:58624314-58624333	Msa0128750:three_prime_UTR	20.0%
!!	AAAATCATAACACAAAACAT+TGG	-	chr1_3:58622396-58622415	None:intergenic	20.0%
!!!	ACAACATTTCAATGTTTTTT+GGG	-	chr1_3:58622610-58622629	None:intergenic	20.0%
!!	TTCATAACAAAAATGAGTTA+AGG	-	chr1_3:58622928-58622947	None:intergenic	20.0%
!!	ATTTGCACTTATTGATAAAT+AGG	+	chr1_3:58623603-58623622	Msa0128750:intron	20.0%
!!	TTGATAAATAGGTAAAAGAA+AGG	+	chr1_3:58623614-58623633	Msa0128750:intron	20.0%
!!	TGATAAATAGGTAAAAGAAA+GGG	+	chr1_3:58623615-58623634	Msa0128750:intron	20.0%
!!	TGATAATATATGTAGTGAAT+TGG	+	chr1_3:58623955-58623974	Msa0128750:intron	20.0%
!!!	TAGTTTTTTATGTTATGTTG+TGG	+	chr1_3:58624154-58624173	Msa0128750:intron	20.0%
!!!	TACAAGTACAATTTTGTATT+GGG	+	chr1_3:58624291-58624310	Msa0128750:three_prime_UTR	20.0%
!!!	TTTATATTTTGTTGCCATTT+TGG	+	chr1_3:58624314-58624333	Msa0128750:three_prime_UTR	20.0%
!!!	GAATAGATGTTGTTTTTGTT+CGG	+	chr1_3:58622505-58622524	Msa0128750:intron	25.0%
!!!	CACAACATTTCAATGTTTTT+TGG	-	chr1_3:58622611-58622630	None:intergenic	25.0%
!!!	ACTTGATTAAGATTTTAGAG+TGG	+	chr1_3:58622631-58622650	Msa0128750:intron	25.0%
!	ATTAAAATGCCCAATTTACT+TGG	+	chr1_3:58622868-58622887	Msa0128750:intron	25.0%
!	TTAAAATGCCCAATTTACTT+GGG	+	chr1_3:58622869-58622888	Msa0128750:intron	25.0%
!	TGATTGTGTTAATTGTTGAT+TGG	+	chr1_3:58622955-58622974	Msa0128750:intron	25.0%
!	TAGAATACATTCACTCTATT+TGG	+	chr1_3:58623299-58623318	Msa0128750:intron	25.0%
!!	AAAGTGTTTAGATACTTACT+GGG	-	chr1_3:58624122-58624141	None:intergenic	25.0%
!!!	AAAAGTGTTTAGATACTTAC+TGG	-	chr1_3:58624123-58624142	None:intergenic	25.0%
!!	ATCTAAACACTTTTGTTACT+TGG	+	chr1_3:58624129-58624148	Msa0128750:intron	25.0%
!!	GTACAAGTACAATTTTGTAT+TGG	+	chr1_3:58624290-58624309	Msa0128750:three_prime_UTR	25.0%
!	AAAGGAAGGAATTTCATAAT+TGG	-	chr1_3:58624386-58624405	None:intergenic	25.0%
!!!	GAATAGATGTTGTTTTTGTT+CGG	+	chr1_3:58622505-58622524	Msa0128750:intron	25.0%
!!!	CACAACATTTCAATGTTTTT+TGG	-	chr1_3:58622611-58622630	None:intergenic	25.0%
!!!	ACTTGATTAAGATTTTAGAG+TGG	+	chr1_3:58622631-58622650	Msa0128750:intron	25.0%
!	ATTAAAATGCCCAATTTACT+TGG	+	chr1_3:58622868-58622887	Msa0128750:intron	25.0%
!	TTAAAATGCCCAATTTACTT+GGG	+	chr1_3:58622869-58622888	Msa0128750:intron	25.0%
!	TGATTGTGTTAATTGTTGAT+TGG	+	chr1_3:58622955-58622974	Msa0128750:intron	25.0%
!	TAGAATACATTCACTCTATT+TGG	+	chr1_3:58623299-58623318	Msa0128750:intron	25.0%
!!	AAAGTGTTTAGATACTTACT+GGG	-	chr1_3:58624122-58624141	None:intergenic	25.0%
!!!	AAAAGTGTTTAGATACTTAC+TGG	-	chr1_3:58624123-58624142	None:intergenic	25.0%
!!	ATCTAAACACTTTTGTTACT+TGG	+	chr1_3:58624129-58624148	Msa0128750:intron	25.0%
!!	GTACAAGTACAATTTTGTAT+TGG	+	chr1_3:58624290-58624309	Msa0128750:three_prime_UTR	25.0%
!	AAAGGAAGGAATTTCATAAT+TGG	-	chr1_3:58624386-58624405	None:intergenic	25.0%
	AGATTTCATTGCACTCATTA+GGG	-	chr1_3:58622329-58622348	None:intergenic	30.0%
!!	TGTTTTTGTTCGGAAATGTA+AGG	+	chr1_3:58622515-58622534	Msa0128750:intron	30.0%
!!!	ATGTAAGGTGTGTTGTTTTA+TGG	+	chr1_3:58622530-58622549	Msa0128750:intron	30.0%
	TATTCAATAGCAGAACTTGT+AGG	+	chr1_3:58622553-58622572	Msa0128750:intron	30.0%
!!	TAGAGTGGATTTAGTTGTTT+TGG	+	chr1_3:58622646-58622665	Msa0128750:intron	30.0%
!!!	GACTCATAAGCTAGTTTTAA+GGG	+	chr1_3:58622699-58622718	Msa0128750:intron	30.0%
!	ATTTTTGTGCCTTTATGAAC+TGG	+	chr1_3:58622753-58622772	Msa0128750:intron	30.0%
!	TTTTTGTGCCTTTATGAACT+GGG	+	chr1_3:58622754-58622773	Msa0128750:intron	30.0%
!	AGCCTTTTCACTGAAAAATT+GGG	+	chr1_3:58622788-58622807	Msa0128750:intron	30.0%
!	TGAAAAATTGGGGCTTTTAT+TGG	+	chr1_3:58622799-58622818	Msa0128750:intron	30.0%
	TCTCCACTAAGTTCATATTA+GGG	-	chr1_3:58622849-58622868	None:intergenic	30.0%
	ATCTCCACTAAGTTCATATT+AGG	-	chr1_3:58622850-58622869	None:intergenic	30.0%
	TAAAATGCCCAATTTACTTG+GGG	+	chr1_3:58622870-58622889	Msa0128750:intron	30.0%
	TGTATTTCACTGATCATATG+TGG	+	chr1_3:58622989-58623008	Msa0128750:intron	30.0%
	TCAGTTGTGTAGAATATTGT+AGG	+	chr1_3:58623470-58623489	Msa0128750:intron	30.0%
	GTATCATGATATGTACATGA+AGG	+	chr1_3:58623745-58623764	Msa0128750:CDS	30.0%
!!	CCTATACATTTTAAAAGGCA+GGG	-	chr1_3:58624036-58624055	None:intergenic	30.0%
!!!	CCTGCCTTTTAAAATGTATA+GGG	+	chr1_3:58624034-58624053	Msa0128750:intron	30.0%
!	TGGACCCTATACATTTTAAA+AGG	-	chr1_3:58624041-58624060	None:intergenic	30.0%
!!!	TTTTAAAATGTATAGGGTCC+AGG	+	chr1_3:58624040-58624059	Msa0128750:intron	30.0%
	TACTTCTTGGATTTCTTTGA+TGG	-	chr1_3:58624206-58624225	None:intergenic	30.0%
	TGGATACTTGATTTACTTCT+TGG	-	chr1_3:58624219-58624238	None:intergenic	30.0%
!!!	ATTTTGTTGCCATTTTGGTA+TGG	+	chr1_3:58624319-58624338	Msa0128750:three_prime_UTR	30.0%
	GAAATTCCTTCCTTTAATTC+CGG	+	chr1_3:58624391-58624410	Msa0128750:three_prime_UTR	30.0%
	AGATTTCATTGCACTCATTA+GGG	-	chr1_3:58622329-58622348	None:intergenic	30.0%
!!	TGTTTTTGTTCGGAAATGTA+AGG	+	chr1_3:58622515-58622534	Msa0128750:intron	30.0%
!!!	ATGTAAGGTGTGTTGTTTTA+TGG	+	chr1_3:58622530-58622549	Msa0128750:intron	30.0%
	TATTCAATAGCAGAACTTGT+AGG	+	chr1_3:58622553-58622572	Msa0128750:intron	30.0%
!!	TAGAGTGGATTTAGTTGTTT+TGG	+	chr1_3:58622646-58622665	Msa0128750:intron	30.0%
!!!	GACTCATAAGCTAGTTTTAA+GGG	+	chr1_3:58622699-58622718	Msa0128750:intron	30.0%
!	ATTTTTGTGCCTTTATGAAC+TGG	+	chr1_3:58622753-58622772	Msa0128750:intron	30.0%
!	TTTTTGTGCCTTTATGAACT+GGG	+	chr1_3:58622754-58622773	Msa0128750:intron	30.0%
!	AGCCTTTTCACTGAAAAATT+GGG	+	chr1_3:58622788-58622807	Msa0128750:intron	30.0%
!	TGAAAAATTGGGGCTTTTAT+TGG	+	chr1_3:58622799-58622818	Msa0128750:intron	30.0%
	TCTCCACTAAGTTCATATTA+GGG	-	chr1_3:58622849-58622868	None:intergenic	30.0%
	ATCTCCACTAAGTTCATATT+AGG	-	chr1_3:58622850-58622869	None:intergenic	30.0%
	TAAAATGCCCAATTTACTTG+GGG	+	chr1_3:58622870-58622889	Msa0128750:intron	30.0%
	TGTATTTCACTGATCATATG+TGG	+	chr1_3:58622989-58623008	Msa0128750:intron	30.0%
	TCAGTTGTGTAGAATATTGT+AGG	+	chr1_3:58623470-58623489	Msa0128750:intron	30.0%
	GTATCATGATATGTACATGA+AGG	+	chr1_3:58623745-58623764	Msa0128750:CDS	30.0%
!!	CCTATACATTTTAAAAGGCA+GGG	-	chr1_3:58624036-58624055	None:intergenic	30.0%
!!!	CCTGCCTTTTAAAATGTATA+GGG	+	chr1_3:58624034-58624053	Msa0128750:intron	30.0%
!	TGGACCCTATACATTTTAAA+AGG	-	chr1_3:58624041-58624060	None:intergenic	30.0%
!!!	TTTTAAAATGTATAGGGTCC+AGG	+	chr1_3:58624040-58624059	Msa0128750:intron	30.0%
	TACTTCTTGGATTTCTTTGA+TGG	-	chr1_3:58624206-58624225	None:intergenic	30.0%
	TGGATACTTGATTTACTTCT+TGG	-	chr1_3:58624219-58624238	None:intergenic	30.0%
!!!	ATTTTGTTGCCATTTTGGTA+TGG	+	chr1_3:58624319-58624338	Msa0128750:three_prime_UTR	30.0%
	GAGATTTCATTGCACTCATT+AGG	-	chr1_3:58622330-58622349	None:intergenic	35.0%
!!!	GGACTCATAAGCTAGTTTTA+AGG	+	chr1_3:58622698-58622717	Msa0128750:intron	35.0%
!	CAGCCTTTTCACTGAAAAAT+TGG	+	chr1_3:58622787-58622806	Msa0128750:intron	35.0%
!	GCCTTTTCACTGAAAAATTG+GGG	+	chr1_3:58622789-58622808	Msa0128750:intron	35.0%
	GTACCCTAATATGAACTTAG+TGG	+	chr1_3:58622843-58622862	Msa0128750:intron	35.0%
	AAAATGCCCAATTTACTTGG+GGG	+	chr1_3:58622871-58622890	Msa0128750:intron	35.0%
	ATTTCACTGATCATATGTGG+TGG	+	chr1_3:58622992-58623011	Msa0128750:intron	35.0%
	TTTCACTGATCATATGTGGT+GGG	+	chr1_3:58622993-58623012	Msa0128750:intron	35.0%
!	TAACCAACTTCCTGATGTTT+TGG	-	chr1_3:58623058-58623077	None:intergenic	35.0%
!	AAACATCAGGAAGTTGGTTA+AGG	+	chr1_3:58623058-58623077	Msa0128750:CDS	35.0%
	TTAAGGATGGCTTCATTATC+CGG	+	chr1_3:58623075-58623094	Msa0128750:CDS	35.0%
	CCATAATAATACTCGTGTGA+TGG	-	chr1_3:58623417-58623436	None:intergenic	35.0%
	CCATCACACGAGTATTATTA+TGG	+	chr1_3:58623414-58623433	Msa0128750:intron	35.0%
!	ACTTCACACGAGTATTTCTA+TGG	+	chr1_3:58623535-58623554	Msa0128750:intron	35.0%
!	TAAAAGAAAGGGTACAAGAG+AGG	+	chr1_3:58623626-58623645	Msa0128750:CDS	35.0%
	TGATATGTACATGAAGGTGA+AGG	+	chr1_3:58623751-58623770	Msa0128750:exon	35.0%
	GATATGTACATGAAGGTGAA+GGG	+	chr1_3:58623752-58623771	Msa0128750:exon	35.0%
	ACTTGTGAATACTCTCCATA+AGG	-	chr1_3:58623801-58623820	None:intergenic	35.0%
	GACATTATCTGATCAGTTTG+AGG	+	chr1_3:58623846-58623865	Msa0128750:three_prime_UTR	35.0%
!!	TTTTAAAAGGCAGGGTGATA+TGG	-	chr1_3:58624028-58624047	None:intergenic	35.0%
!!!	CCCTGCCTTTTAAAATGTAT+AGG	+	chr1_3:58624033-58624052	Msa0128750:intron	35.0%
!!	CCCTATACATTTTAAAAGGC+AGG	-	chr1_3:58624037-58624056	None:intergenic	35.0%
	GAAGTAAATCAAGTATCCAG+AGG	+	chr1_3:58624220-58624239	Msa0128750:three_prime_UTR	35.0%
	AAATGAAAATACTCGACCTC+TGG	-	chr1_3:58624239-58624258	None:intergenic	35.0%
!	GTGCATTTTCCATACCAAAA+TGG	-	chr1_3:58624331-58624350	None:intergenic	35.0%
	TTGGTATGGAAAATGCACTT+TGG	+	chr1_3:58624333-58624352	Msa0128750:three_prime_UTR	35.0%
	GAGATTTCATTGCACTCATT+AGG	-	chr1_3:58622330-58622349	None:intergenic	35.0%
!!!	GGACTCATAAGCTAGTTTTA+AGG	+	chr1_3:58622698-58622717	Msa0128750:intron	35.0%
!	CAGCCTTTTCACTGAAAAAT+TGG	+	chr1_3:58622787-58622806	Msa0128750:intron	35.0%
!	GCCTTTTCACTGAAAAATTG+GGG	+	chr1_3:58622789-58622808	Msa0128750:intron	35.0%
	GTACCCTAATATGAACTTAG+TGG	+	chr1_3:58622843-58622862	Msa0128750:intron	35.0%
	AAAATGCCCAATTTACTTGG+GGG	+	chr1_3:58622871-58622890	Msa0128750:intron	35.0%
	ATTTCACTGATCATATGTGG+TGG	+	chr1_3:58622992-58623011	Msa0128750:intron	35.0%
	TTTCACTGATCATATGTGGT+GGG	+	chr1_3:58622993-58623012	Msa0128750:intron	35.0%
!	TAACCAACTTCCTGATGTTT+TGG	-	chr1_3:58623058-58623077	None:intergenic	35.0%
!	AAACATCAGGAAGTTGGTTA+AGG	+	chr1_3:58623058-58623077	Msa0128750:CDS	35.0%
	TTAAGGATGGCTTCATTATC+CGG	+	chr1_3:58623075-58623094	Msa0128750:CDS	35.0%
	CCATAATAATACTCGTGTGA+TGG	-	chr1_3:58623417-58623436	None:intergenic	35.0%
	CCATCACACGAGTATTATTA+TGG	+	chr1_3:58623414-58623433	Msa0128750:intron	35.0%
!	ACTTCACACGAGTATTTCTA+TGG	+	chr1_3:58623535-58623554	Msa0128750:intron	35.0%
!	TAAAAGAAAGGGTACAAGAG+AGG	+	chr1_3:58623626-58623645	Msa0128750:CDS	35.0%
	TGATATGTACATGAAGGTGA+AGG	+	chr1_3:58623751-58623770	Msa0128750:exon	35.0%
	GATATGTACATGAAGGTGAA+GGG	+	chr1_3:58623752-58623771	Msa0128750:exon	35.0%
	ACTTGTGAATACTCTCCATA+AGG	-	chr1_3:58623801-58623820	None:intergenic	35.0%
	GACATTATCTGATCAGTTTG+AGG	+	chr1_3:58623846-58623865	Msa0128750:three_prime_UTR	35.0%
!!	TTTTAAAAGGCAGGGTGATA+TGG	-	chr1_3:58624028-58624047	None:intergenic	35.0%
!!!	CCCTGCCTTTTAAAATGTAT+AGG	+	chr1_3:58624033-58624052	Msa0128750:intron	35.0%
!!	CCCTATACATTTTAAAAGGC+AGG	-	chr1_3:58624037-58624056	None:intergenic	35.0%
	GAAGTAAATCAAGTATCCAG+AGG	+	chr1_3:58624220-58624239	Msa0128750:three_prime_UTR	35.0%
	AAATGAAAATACTCGACCTC+TGG	-	chr1_3:58624239-58624258	None:intergenic	35.0%
!	GTGCATTTTCCATACCAAAA+TGG	-	chr1_3:58624331-58624350	None:intergenic	35.0%
	TTGGTATGGAAAATGCACTT+TGG	+	chr1_3:58624333-58624352	Msa0128750:three_prime_UTR	35.0%
!	AACTAGGGTTAGTGAGAGAT+AGG	+	chr1_3:58622156-58622175	Msa0128750:five_prime_UTR	40.0%
	TGAGTGCAATGAAATCTCCA+TGG	+	chr1_3:58622332-58622351	Msa0128750:CDS	40.0%
	GTAGCAGTAGTTACGTGAAT+TGG	-	chr1_3:58622358-58622377	None:intergenic	40.0%
	TTGAGCATCCCAGTTCATAA+AGG	-	chr1_3:58622765-58622784	None:intergenic	40.0%
!!	GCCCCAATTTTTCAGTGAAA+AGG	-	chr1_3:58622793-58622812	None:intergenic	40.0%
	TGAGAACCCCCAAGTAAATT+GGG	-	chr1_3:58622880-58622899	None:intergenic	40.0%
	ATGAGAACCCCCAAGTAAAT+TGG	-	chr1_3:58622881-58622900	None:intergenic	40.0%
	CCAACCAAACCATTTATCAC+AGG	-	chr1_3:58623021-58623040	None:intergenic	40.0%
!!	CCTGTGATAAATGGTTTGGT+TGG	+	chr1_3:58623018-58623037	Msa0128750:intron	40.0%
!	ATCAGGAAGTTGGTTAAGGA+TGG	+	chr1_3:58623062-58623081	Msa0128750:CDS	40.0%
!	AGTGAATCTTAGTTGGCTTC+CGG	-	chr1_3:58623097-58623116	None:intergenic	40.0%
!	TCAGTTGTGCGAAGTATTCT+AGG	+	chr1_3:58623339-58623358	Msa0128750:intron	40.0%
	TCTATGGTACTTGCACTATC+AGG	+	chr1_3:58623551-58623570	Msa0128750:intron	40.0%
!!	TCATCCAAAGGATTTTGGTG+GGG	-	chr1_3:58623659-58623678	None:intergenic	40.0%
!!	CTCATCCAAAGGATTTTGGT+GGG	-	chr1_3:58623660-58623679	None:intergenic	40.0%
	TGTCAATCTTCTTTGCCTCT+CGG	-	chr1_3:58623718-58623737	None:intergenic	40.0%
	CAAGAACAAGAGAGTCCTTA+TGG	+	chr1_3:58623783-58623802	Msa0128750:three_prime_UTR	40.0%
	TTTAGATACTTACTGGGCCT+GGG	-	chr1_3:58624116-58624135	None:intergenic	40.0%
!!	ACTAACCCTAGTTTTTGCTC+CGG	-	chr1_3:58622149-58622168	None:intergenic	40.0%
!	AACTAGGGTTAGTGAGAGAT+AGG	+	chr1_3:58622156-58622175	Msa0128750:five_prime_UTR	40.0%
	TGAGTGCAATGAAATCTCCA+TGG	+	chr1_3:58622332-58622351	Msa0128750:CDS	40.0%
	GTAGCAGTAGTTACGTGAAT+TGG	-	chr1_3:58622358-58622377	None:intergenic	40.0%
	TTGAGCATCCCAGTTCATAA+AGG	-	chr1_3:58622765-58622784	None:intergenic	40.0%
!!	GCCCCAATTTTTCAGTGAAA+AGG	-	chr1_3:58622793-58622812	None:intergenic	40.0%
	TGAGAACCCCCAAGTAAATT+GGG	-	chr1_3:58622880-58622899	None:intergenic	40.0%
	ATGAGAACCCCCAAGTAAAT+TGG	-	chr1_3:58622881-58622900	None:intergenic	40.0%
	CCAACCAAACCATTTATCAC+AGG	-	chr1_3:58623021-58623040	None:intergenic	40.0%
!!	CCTGTGATAAATGGTTTGGT+TGG	+	chr1_3:58623018-58623037	Msa0128750:intron	40.0%
!	ATCAGGAAGTTGGTTAAGGA+TGG	+	chr1_3:58623062-58623081	Msa0128750:CDS	40.0%
!	AGTGAATCTTAGTTGGCTTC+CGG	-	chr1_3:58623097-58623116	None:intergenic	40.0%
!	TCAGTTGTGCGAAGTATTCT+AGG	+	chr1_3:58623339-58623358	Msa0128750:intron	40.0%
	TCTATGGTACTTGCACTATC+AGG	+	chr1_3:58623551-58623570	Msa0128750:intron	40.0%
!!	TCATCCAAAGGATTTTGGTG+GGG	-	chr1_3:58623659-58623678	None:intergenic	40.0%
!!	CTCATCCAAAGGATTTTGGT+GGG	-	chr1_3:58623660-58623679	None:intergenic	40.0%
	TGTCAATCTTCTTTGCCTCT+CGG	-	chr1_3:58623718-58623737	None:intergenic	40.0%
	CAAGAACAAGAGAGTCCTTA+TGG	+	chr1_3:58623783-58623802	Msa0128750:three_prime_UTR	40.0%
	TTTAGATACTTACTGGGCCT+GGG	-	chr1_3:58624116-58624135	None:intergenic	40.0%
	TGTCGCTCAAACTTCAGAAG+CGG	+	chr1_3:58622256-58622275	Msa0128750:CDS	45.0%
	GTAGTTACGTGAATTGGCCA+TGG	-	chr1_3:58622352-58622371	None:intergenic	45.0%
	GGAGCCTGTGATAAATGGTT+TGG	+	chr1_3:58623014-58623033	Msa0128750:intron	45.0%
!!	TTTGGTTGGTTTCTCGTTGC+AGG	+	chr1_3:58623032-58623051	Msa0128750:intron	45.0%
	AGGCCAAAACATCAGGAAGT+TGG	+	chr1_3:58623052-58623071	Msa0128750:intron	45.0%
	AAGGGACGTCATTCTGGATA+TGG	+	chr1_3:58623155-58623174	Msa0128750:CDS	45.0%
	GGTACTTGCACTATCAGGAT+AGG	+	chr1_3:58623556-58623575	Msa0128750:intron	45.0%
!	CCTCATCCAAAGGATTTTGG+TGG	-	chr1_3:58623661-58623680	None:intergenic	45.0%
	CCACCAAAATCCTTTGGATG+AGG	+	chr1_3:58623658-58623677	Msa0128750:CDS	45.0%
!	CCTCCTCATCCAAAGGATTT+TGG	-	chr1_3:58623664-58623683	None:intergenic	45.0%
	CCAAAATCCTTTGGATGAGG+AGG	+	chr1_3:58623661-58623680	Msa0128750:CDS	45.0%
!!	GGAGAGTATTCACAAGTCCA+AGG	+	chr1_3:58623804-58623823	Msa0128750:three_prime_UTR	45.0%
!	TGATCAGTTTGAGGCCAAGA+GGG	+	chr1_3:58623855-58623874	Msa0128750:three_prime_UTR	45.0%
	AGAATAAGGCTAGCAGGGAA+AGG	+	chr1_3:58623881-58623900	Msa0128750:three_prime_UTR	45.0%
	GTTTAGATACTTACTGGGCC+TGG	-	chr1_3:58624117-58624136	None:intergenic	45.0%
	TGTCGCTCAAACTTCAGAAG+CGG	+	chr1_3:58622256-58622275	Msa0128750:CDS	45.0%
	GTAGTTACGTGAATTGGCCA+TGG	-	chr1_3:58622352-58622371	None:intergenic	45.0%
	GGAGCCTGTGATAAATGGTT+TGG	+	chr1_3:58623014-58623033	Msa0128750:intron	45.0%
!!	TTTGGTTGGTTTCTCGTTGC+AGG	+	chr1_3:58623032-58623051	Msa0128750:intron	45.0%
	AGGCCAAAACATCAGGAAGT+TGG	+	chr1_3:58623052-58623071	Msa0128750:intron	45.0%
	AAGGGACGTCATTCTGGATA+TGG	+	chr1_3:58623155-58623174	Msa0128750:CDS	45.0%
	GGTACTTGCACTATCAGGAT+AGG	+	chr1_3:58623556-58623575	Msa0128750:intron	45.0%
!	CCTCATCCAAAGGATTTTGG+TGG	-	chr1_3:58623661-58623680	None:intergenic	45.0%
	CCACCAAAATCCTTTGGATG+AGG	+	chr1_3:58623658-58623677	Msa0128750:CDS	45.0%
!	CCTCCTCATCCAAAGGATTT+TGG	-	chr1_3:58623664-58623683	None:intergenic	45.0%
	CCAAAATCCTTTGGATGAGG+AGG	+	chr1_3:58623661-58623680	Msa0128750:CDS	45.0%
!!	GGAGAGTATTCACAAGTCCA+AGG	+	chr1_3:58623804-58623823	Msa0128750:three_prime_UTR	45.0%
!	TGATCAGTTTGAGGCCAAGA+GGG	+	chr1_3:58623855-58623874	Msa0128750:three_prime_UTR	45.0%
	AGAATAAGGCTAGCAGGGAA+AGG	+	chr1_3:58623881-58623900	Msa0128750:three_prime_UTR	45.0%
	GTTTAGATACTTACTGGGCC+TGG	-	chr1_3:58624117-58624136	None:intergenic	45.0%
!	CTCTCTGGTTCGATAACCTG+CGG	-	chr1_3:58622204-58622223	None:intergenic	50.0%
!	GAACCAGAGAGAGAGTGTGA+GGG	+	chr1_3:58622213-58622232	Msa0128750:five_prime_UTR	50.0%
	GGGAGAGAGAAAGAGAGAGA+TGG	+	chr1_3:58622233-58622252	Msa0128750:exon	50.0%
	TGGTGGGAGCCTGTGATAAA+TGG	+	chr1_3:58623009-58623028	Msa0128750:intron	50.0%
	TCGTTGCAGGCCAAAACATC+AGG	+	chr1_3:58623045-58623064	Msa0128750:intron	50.0%
	GAGCGGGAGTGAATCTTAGT+TGG	-	chr1_3:58623104-58623123	None:intergenic	50.0%
	TATGAAGGAGGCCAAGAGGA+AGG	+	chr1_3:58623136-58623155	Msa0128750:CDS	50.0%
	ATGAAGGAGGCCAAGAGGAA+GGG	+	chr1_3:58623137-58623156	Msa0128750:CDS	50.0%
	AGAATGACGTCCCTTCCTCT+TGG	-	chr1_3:58623150-58623169	None:intergenic	50.0%
	AAGAGGAAGGGACGTCATTC+TGG	+	chr1_3:58623149-58623168	Msa0128750:CDS	50.0%
!	GAAAGGGTACAAGAGAGGCT+AGG	+	chr1_3:58623631-58623650	Msa0128750:CDS	50.0%
	TCACAAGTCCAAGGCTGAGA+AGG	+	chr1_3:58623813-58623832	Msa0128750:three_prime_UTR	50.0%
!	CTGATCAGTTTGAGGCCAAG+AGG	+	chr1_3:58623854-58623873	Msa0128750:three_prime_UTR	50.0%
!!	AGCCTTATTCTTCGCCCTCT+TGG	-	chr1_3:58623872-58623891	None:intergenic	50.0%
	GGCGAAGAATAAGGCTAGCA+GGG	+	chr1_3:58623876-58623895	Msa0128750:three_prime_UTR	50.0%
	TGTATAGGGTCCAGGAGAGA+AGG	+	chr1_3:58624048-58624067	Msa0128750:intron	50.0%
!	CTCTCTGGTTCGATAACCTG+CGG	-	chr1_3:58622204-58622223	None:intergenic	50.0%
!	GAACCAGAGAGAGAGTGTGA+GGG	+	chr1_3:58622213-58622232	Msa0128750:five_prime_UTR	50.0%
	GGGAGAGAGAAAGAGAGAGA+TGG	+	chr1_3:58622233-58622252	Msa0128750:exon	50.0%
	TGGTGGGAGCCTGTGATAAA+TGG	+	chr1_3:58623009-58623028	Msa0128750:intron	50.0%
	TCGTTGCAGGCCAAAACATC+AGG	+	chr1_3:58623045-58623064	Msa0128750:intron	50.0%
	GAGCGGGAGTGAATCTTAGT+TGG	-	chr1_3:58623104-58623123	None:intergenic	50.0%
	TATGAAGGAGGCCAAGAGGA+AGG	+	chr1_3:58623136-58623155	Msa0128750:CDS	50.0%
	ATGAAGGAGGCCAAGAGGAA+GGG	+	chr1_3:58623137-58623156	Msa0128750:CDS	50.0%
	AGAATGACGTCCCTTCCTCT+TGG	-	chr1_3:58623150-58623169	None:intergenic	50.0%
	AAGAGGAAGGGACGTCATTC+TGG	+	chr1_3:58623149-58623168	Msa0128750:CDS	50.0%
!	GAAAGGGTACAAGAGAGGCT+AGG	+	chr1_3:58623631-58623650	Msa0128750:CDS	50.0%
	TCACAAGTCCAAGGCTGAGA+AGG	+	chr1_3:58623813-58623832	Msa0128750:three_prime_UTR	50.0%
!	CTGATCAGTTTGAGGCCAAG+AGG	+	chr1_3:58623854-58623873	Msa0128750:three_prime_UTR	50.0%
!!	AGCCTTATTCTTCGCCCTCT+TGG	-	chr1_3:58623872-58623891	None:intergenic	50.0%
	GGCGAAGAATAAGGCTAGCA+GGG	+	chr1_3:58623876-58623895	Msa0128750:three_prime_UTR	50.0%
	TGTATAGGGTCCAGGAGAGA+AGG	+	chr1_3:58624048-58624067	Msa0128750:intron	50.0%
	ATATAGCCTCCTTCCACCGC+AGG	+	chr1_3:58622185-58622204	Msa0128750:five_prime_UTR	55.0%
	GTTCGATAACCTGCGGTGGA+AGG	-	chr1_3:58622197-58622216	None:intergenic	55.0%
!	TCTGGTTCGATAACCTGCGG+TGG	-	chr1_3:58622201-58622220	None:intergenic	55.0%
!	CGAACCAGAGAGAGAGTGTG+AGG	+	chr1_3:58622212-58622231	Msa0128750:five_prime_UTR	55.0%
	TCTCCCTCACACTCTCTCTC+TGG	-	chr1_3:58622219-58622238	None:intergenic	55.0%
	ACCACACTTGAGTACGCTGG+CGG	-	chr1_3:58622286-58622305	None:intergenic	55.0%
	ACGACCACACTTGAGTACGC+TGG	-	chr1_3:58622289-58622308	None:intergenic	55.0%
	AGCGTACTCAAGTGTGGTCG+TGG	+	chr1_3:58622288-58622307	Msa0128750:CDS	55.0%
	ACTCAAGTGTGGTCGTGGCA+AGG	+	chr1_3:58622293-58622312	Msa0128750:CDS	55.0%
	CTCCTTCATACGCCTAGCAC+GGG	-	chr1_3:58623126-58623145	None:intergenic	55.0%
	CCTCCTTCATACGCCTAGCA+CGG	-	chr1_3:58623127-58623146	None:intergenic	55.0%
	GGCTCCCCACCAAAATCCTT+TGG	+	chr1_3:58623652-58623671	Msa0128750:CDS	55.0%
	CACGCATCCTCCTCATCCAA+AGG	-	chr1_3:58623671-58623690	None:intergenic	55.0%
	TACTGCGAAGCAAACGCCTG+AGG	-	chr1_3:58623695-58623714	None:intergenic	55.0%
!	GTTTGCTTCGCAGTACCGAG+AGG	+	chr1_3:58623700-58623719	Msa0128750:CDS	55.0%
!	CTCTCTAGCCTTCTCAGCCT+TGG	-	chr1_3:58623824-58623843	None:intergenic	55.0%
	GGCCAAGAGGGCGAAGAATA+AGG	+	chr1_3:58623867-58623886	Msa0128750:three_prime_UTR	55.0%
	GGGCGAAGAATAAGGCTAGC+AGG	+	chr1_3:58623875-58623894	Msa0128750:three_prime_UTR	55.0%
!	AGCAAAGCGCTCTTCTCTGC+GGG	-	chr1_3:58623914-58623933	None:intergenic	55.0%
!	GAGCAAAGCGCTCTTCTCTG+CGG	-	chr1_3:58623915-58623934	None:intergenic	55.0%
	ATATAGCCTCCTTCCACCGC+AGG	+	chr1_3:58622185-58622204	Msa0128750:five_prime_UTR	55.0%
	GTTCGATAACCTGCGGTGGA+AGG	-	chr1_3:58622197-58622216	None:intergenic	55.0%
!	TCTGGTTCGATAACCTGCGG+TGG	-	chr1_3:58622201-58622220	None:intergenic	55.0%
!	CGAACCAGAGAGAGAGTGTG+AGG	+	chr1_3:58622212-58622231	Msa0128750:five_prime_UTR	55.0%
	TCTCCCTCACACTCTCTCTC+TGG	-	chr1_3:58622219-58622238	None:intergenic	55.0%
	ACCACACTTGAGTACGCTGG+CGG	-	chr1_3:58622286-58622305	None:intergenic	55.0%
	ACGACCACACTTGAGTACGC+TGG	-	chr1_3:58622289-58622308	None:intergenic	55.0%
	AGCGTACTCAAGTGTGGTCG+TGG	+	chr1_3:58622288-58622307	Msa0128750:CDS	55.0%
	ACTCAAGTGTGGTCGTGGCA+AGG	+	chr1_3:58622293-58622312	Msa0128750:CDS	55.0%
	CTCCTTCATACGCCTAGCAC+GGG	-	chr1_3:58623126-58623145	None:intergenic	55.0%
	CCTCCTTCATACGCCTAGCA+CGG	-	chr1_3:58623127-58623146	None:intergenic	55.0%
	GGCTCCCCACCAAAATCCTT+TGG	+	chr1_3:58623652-58623671	Msa0128750:CDS	55.0%
	CACGCATCCTCCTCATCCAA+AGG	-	chr1_3:58623671-58623690	None:intergenic	55.0%
	TACTGCGAAGCAAACGCCTG+AGG	-	chr1_3:58623695-58623714	None:intergenic	55.0%
!	GTTTGCTTCGCAGTACCGAG+AGG	+	chr1_3:58623700-58623719	Msa0128750:CDS	55.0%
!	CTCTCTAGCCTTCTCAGCCT+TGG	-	chr1_3:58623824-58623843	None:intergenic	55.0%
	GGCCAAGAGGGCGAAGAATA+AGG	+	chr1_3:58623867-58623886	Msa0128750:three_prime_UTR	55.0%
	GGGCGAAGAATAAGGCTAGC+AGG	+	chr1_3:58623875-58623894	Msa0128750:three_prime_UTR	55.0%
!	AGCAAAGCGCTCTTCTCTGC+GGG	-	chr1_3:58623914-58623933	None:intergenic	55.0%
!	GAGCAAAGCGCTCTTCTCTG+CGG	-	chr1_3:58623915-58623934	None:intergenic	55.0%
	CGATAACCTGCGGTGGAAGG+AGG	-	chr1_3:58622194-58622213	None:intergenic	60.0%
	AGTGTGGTCGTGGCAAGGTC+TGG	+	chr1_3:58622298-58622317	Msa0128750:CDS	60.0%
	TCATACGCCTAGCACGGGAG+CGG	-	chr1_3:58623121-58623140	None:intergenic	60.0%
	CTCCCGTGCTAGGCGTATGA+AGG	+	chr1_3:58623121-58623140	Msa0128750:CDS	60.0%
	CCGTGCTAGGCGTATGAAGG+AGG	+	chr1_3:58623124-58623143	Msa0128750:CDS	60.0%
	GGCGTATGAAGGAGGCCAAG+AGG	+	chr1_3:58623132-58623151	Msa0128750:CDS	60.0%
	TGAGGAGGATGCGTGTCCTC+AGG	+	chr1_3:58623676-58623695	Msa0128750:CDS	60.0%
	GCTGCAGGAACCTTCTCTCC+TGG	-	chr1_3:58624061-58624080	None:intergenic	60.0%
!	GGTTGCTGTTGCAGCTGGTG+CGG	-	chr1_3:58624095-58624114	None:intergenic	60.0%
	ACCAGCTGCAACAGCAACCC+AGG	+	chr1_3:58624096-58624115	Msa0128750:three_prime_UTR	60.0%
	CGATAACCTGCGGTGGAAGG+AGG	-	chr1_3:58622194-58622213	None:intergenic	60.0%
	AGTGTGGTCGTGGCAAGGTC+TGG	+	chr1_3:58622298-58622317	Msa0128750:CDS	60.0%
	TCATACGCCTAGCACGGGAG+CGG	-	chr1_3:58623121-58623140	None:intergenic	60.0%
	CTCCCGTGCTAGGCGTATGA+AGG	+	chr1_3:58623121-58623140	Msa0128750:CDS	60.0%
	CCGTGCTAGGCGTATGAAGG+AGG	+	chr1_3:58623124-58623143	Msa0128750:CDS	60.0%
	GGCGTATGAAGGAGGCCAAG+AGG	+	chr1_3:58623132-58623151	Msa0128750:CDS	60.0%
	TGAGGAGGATGCGTGTCCTC+AGG	+	chr1_3:58623676-58623695	Msa0128750:CDS	60.0%
	GCTGCAGGAACCTTCTCTCC+TGG	-	chr1_3:58624061-58624080	None:intergenic	60.0%
!	GGTTGCTGTTGCAGCTGGTG+CGG	-	chr1_3:58624095-58624114	None:intergenic	60.0%
	ACCAGCTGCAACAGCAACCC+AGG	+	chr1_3:58624096-58624115	Msa0128750:three_prime_UTR	60.0%
	GCCGCCAGCGTACTCAAGTG+TGG	+	chr1_3:58622282-58622301	Msa0128750:CDS	65.0%
	TGGTCGTGGCAAGGTCTGGC+TGG	+	chr1_3:58622302-58622321	Msa0128750:CDS	65.0%
	TTCACTCCCGCTCCCGTGCT+AGG	+	chr1_3:58623111-58623130	Msa0128750:CDS	65.0%
	CATACGCCTAGCACGGGAGC+GGG	-	chr1_3:58623120-58623139	None:intergenic	65.0%
!	GCCTGGGTTGCTGTTGCAGC+TGG	-	chr1_3:58624100-58624119	None:intergenic	65.0%
	GCCGCCAGCGTACTCAAGTG+TGG	+	chr1_3:58622282-58622301	Msa0128750:CDS	65.0%
	TGGTCGTGGCAAGGTCTGGC+TGG	+	chr1_3:58622302-58622321	Msa0128750:CDS	65.0%
	TTCACTCCCGCTCCCGTGCT+AGG	+	chr1_3:58623111-58623130	Msa0128750:CDS	65.0%
	CATACGCCTAGCACGGGAGC+GGG	-	chr1_3:58623120-58623139	None:intergenic	65.0%
!	GCCTGGGTTGCTGTTGCAGC+TGG	-	chr1_3:58624100-58624119	None:intergenic	65.0%
	GCTGTTGCAGCTGGTGCGGC+TGG	-	chr1_3:58624091-58624110	None:intergenic	70.0%
	GCTGTTGCAGCTGGTGCGGC+TGG	-	chr1_3:58624091-58624110	None:intergenic	70.0%
!!	GCGGCTGGTGCTGCAGCTGC+AGG	-	chr1_3:58624076-58624095	None:intergenic	75.0%
!!	GCGGCTGGTGCTGCAGCTGC+AGG	-	chr1_3:58624076-58624095	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_3	gene	58622148	58624411	58622148	ID=Msa0128750;Name=Msa0128750
chr1_3	mRNA	58622148	58624411	58622148	ID=Msa0128750-mRNA-1;Parent=Msa0128750;Name=Msa0128750-mRNA-1;_AED=0.00;_eAED=0.00;_QI=104\|1\|1\|1\|0.75\|0.8\|5\|450\|124
chr1_3	exon	58622148	58622363	58622148	ID=Msa0128750-mRNA-1:exon:18836;Parent=Msa0128750-mRNA-1
chr1_3	exon	58623054	58623176	58623054	ID=Msa0128750-mRNA-1:exon:18837;Parent=Msa0128750-mRNA-1
chr1_3	exon	58623625	58623936	58623625	ID=Msa0128750-mRNA-1:exon:18838;Parent=Msa0128750-mRNA-1
chr1_3	exon	58624055	58624122	58624055	ID=Msa0128750-mRNA-1:exon:18839;Parent=Msa0128750-mRNA-1
chr1_3	exon	58624202	58624411	58624202	ID=Msa0128750-mRNA-1:exon:18840;Parent=Msa0128750-mRNA-1
chr1_3	five_prime_UTR	58622148	58622251	58622148	ID=Msa0128750-mRNA-1:five_prime_utr;Parent=Msa0128750-mRNA-1
chr1_3	CDS	58622252	58622363	58622252	ID=Msa0128750-mRNA-1:cds;Parent=Msa0128750-mRNA-1
chr1_3	CDS	58623054	58623176	58623054	ID=Msa0128750-mRNA-1:cds;Parent=Msa0128750-mRNA-1
chr1_3	CDS	58623625	58623764	58623625	ID=Msa0128750-mRNA-1:cds;Parent=Msa0128750-mRNA-1
chr1_3	three_prime_UTR	58623765	58623936	58623765	ID=Msa0128750-mRNA-1:three_prime_utr;Parent=Msa0128750-mRNA-1
chr1_3	three_prime_UTR	58624055	58624122	58624055	ID=Msa0128750-mRNA-1:three_prime_utr;Parent=Msa0128750-mRNA-1
chr1_3	three_prime_UTR	58624202	58624411	58624202	ID=Msa0128750-mRNA-1:three_prime_utr;Parent=Msa0128750-mRNA-1

Gene Sequence	>Msa0128750 ATGGTGTCGCTCAAACTTCAGAAGCGGCTCGCCGCCAGCGTACTCAAGTGTGGTCGTGGCAAGGTCTGGCTGGACCCTAATGAGTGCAATGAAATCTCCATGGCCAATTCACGCCAAAACATCAGGAAGTTGGTTAAGGATGGCTTCATTATCCGGAAGCCAACTAAGATTCACTCCCGCTCCCGTGCTAGGCGTATGAAGGAGGCCAAGAGGAAGGGACGTCATTCTGGATATGGTAAAAGAAAGGGTACAAGAGAGGCTAGGCTCCCCACCAAAATCCTTTGGATGAGGAGGATGCGTGTCCTCAGGCGTTTGCTTCGCAGTACCGAGAGGCAAAGAAGATTGACAAACATATGTATCATGATATGTACATGA
Protein sequence	>Msa0128750 MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRSTERQRRLTNICIMICT*