Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1374480 | XP_003602519.1 | 100.000 | 245 | 0 | 0 | 1 | 245 | 1 | 245 | 1.84e-171 | 482 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1374480 | sp|Q99JH1|RP25L_MOUSE | 35.294 | 136 | 79 | 3 | 1 | 127 | 1 | 136 | 6.24e-18 | 81.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1374480 | G7JAD8 | 100.000 | 245 | 0 | 0 | 1 | 245 | 1 | 245 | 8.77e-172 | 482 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1368920 | Msa1374480 | 0.824633 | 7.261063e-54 | -8.615850e-47 |
| Msa1374480 | Msa1446410 | 0.828745 | 7.577115e-55 | -8.615850e-47 |
| Msa1374480 | Msa1463570 | 0.823476 | 1.357215e-53 | -8.615850e-47 |
| Msa0649890 | Msa1374480 | 0.846290 | 2.384052e-59 | -8.615850e-47 |
| Msa0822580 | Msa1374480 | 0.801583 | 8.409861e-49 | -8.615850e-47 |
| Msa0838070 | Msa1374480 | 0.815910 | 7.255622e-52 | -8.615850e-47 |
| Msa0128330 | Msa1374480 | 0.818944 | 1.504489e-52 | -8.615850e-47 |
| Msa0128750 | Msa1374480 | 0.841587 | 4.341681e-58 | -8.615850e-47 |
| Msa0167860 | Msa1374480 | 0.806136 | 9.525735e-50 | -8.615850e-47 |
| Msa0174580 | Msa1374480 | 0.822049 | 2.916308e-53 | -8.615850e-47 |
| Msa0191450 | Msa1374480 | 0.813357 | 2.666258e-51 | -8.615850e-47 |
| Msa0191550 | Msa1374480 | 0.806929 | 6.478662e-50 | -8.615850e-47 |
| Msa0194940 | Msa1374480 | 0.855243 | 7.189488e-62 | -8.615850e-47 |
| Msa1295150 | Msa1374480 | 0.801153 | 1.029776e-48 | -8.615850e-47 |
| Msa1311400 | Msa1374480 | 0.838157 | 3.396971e-57 | -8.615850e-47 |
| Msa0436720 | Msa1374480 | 0.800072 | 1.711203e-48 | -8.615850e-47 |
| Msa0436750 | Msa1374480 | 0.967150 | 6.988676e-127 | -8.615850e-47 |
| Msa0473570 | Msa1374480 | 0.968799 | 3.404897e-129 | -8.615850e-47 |
| Msa0481520 | Msa1374480 | 0.828628 | 8.087638e-55 | -8.615850e-47 |
| Msa1037290 | Msa1374480 | 0.824981 | 6.012110e-54 | -8.615850e-47 |
| Msa0315430 | Msa1374480 | 0.822254 | 2.613525e-53 | -8.615850e-47 |
| Msa1126520 | Msa1374480 | 0.831812 | 1.349962e-55 | -8.615850e-47 |
| Msa1164150 | Msa1374480 | 0.833546 | 5.011014e-56 | -8.615850e-47 |
| Msa0484730 | Msa1374480 | 0.984432 | 1.526653e-160 | -8.615850e-47 |
| Msa0529900 | Msa1374480 | 0.816937 | 4.274937e-52 | -8.615850e-47 |
| Msa0579830 | Msa1374480 | 0.845568 | 3.744971e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1374480 | MtrunA17_Chr3g0129471 | 100.000 | 217 | 0 | 0 | 29 | 245 | 1 | 217 | 2.40e-153 | 425 |
| Msa1374480 | MtrunA17_Chr3g0129501 | 94.709 | 189 | 10 | 0 | 29 | 217 | 1 | 189 | 3.49e-95 | 278 |
| Msa1374480 | MtrunA17_Chr3g0129481 | 92.147 | 191 | 12 | 2 | 29 | 217 | 1 | 190 | 3.95e-81 | 242 |
| Msa1374480 | MtrunA17_Chr7g0237631 | 66.901 | 142 | 47 | 0 | 1 | 142 | 1 | 142 | 5.72e-64 | 203 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1374480 | AT1G76010.2 | 77.027 | 148 | 33 | 1 | 1 | 147 | 1 | 148 | 4.70e-74 | 229 |
| Msa1374480 | AT1G76010.1 | 77.027 | 148 | 33 | 1 | 1 | 147 | 1 | 148 | 4.70e-74 | 229 |
| Msa1374480 | AT1G20220.1 | 72.973 | 148 | 39 | 1 | 1 | 147 | 1 | 148 | 3.86e-70 | 218 |
| Msa1374480 | AT3G07030.2 | 65.926 | 135 | 46 | 0 | 1 | 135 | 1 | 135 | 2.78e-59 | 192 |
| Msa1374480 | AT3G07030.3 | 65.926 | 135 | 46 | 0 | 1 | 135 | 1 | 135 | 2.78e-59 | 192 |
| Msa1374480 | AT3G07030.4 | 65.926 | 135 | 46 | 0 | 1 | 135 | 1 | 135 | 3.37e-59 | 192 |
| Msa1374480 | AT3G07030.1 | 65.926 | 135 | 46 | 0 | 1 | 135 | 1 | 135 | 8.44e-59 | 191 |
| Msa1374480 | AT3G07030.5 | 65.926 | 135 | 46 | 0 | 1 | 135 | 1 | 135 | 9.97e-59 | 192 |
Find 124 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTTCATATTCATTTAA+AGG | 0.086684 | tig0019487:-160628 | None:intergenic |
| GTGCATGGGGTCGTGCTTTC+CGG | 0.114627 | tig0019487:+161227 | Msa1374480:CDS |
| CACAAAATTGGAATATTTAT+AGG | 0.238360 | tig0019487:-161987 | None:intergenic |
| CGGCCATGTTCCTGCAGTTT+TGG | 0.243075 | tig0019487:+161812 | Msa1374480:three_prime_UTR |
| AGGAGAATAAAACACAAAAT+TGG | 0.250041 | tig0019487:-161999 | None:intergenic |
| TGAGTTGAGTTGACAGGTTT+TGG | 0.270816 | tig0019487:-158871 | None:intergenic |
| CTGCATCAGAACACTATTAT+TGG | 0.280228 | tig0019487:+159750 | Msa1374480:CDS |
| AGCGAGGGGCTGGGTGGCTA+TGG | 0.298249 | tig0019487:-158922 | None:intergenic |
| ACAAAATTGGAATATTTATA+GGG | 0.308857 | tig0019487:-161986 | None:intergenic |
| GCAGAGGGCGTGGCCGTGCA+TGG | 0.313343 | tig0019487:+161212 | Msa1374480:CDS |
| AGGGGCAGGGGCAGAGGTAG+AGG | 0.315006 | tig0019487:+160792 | Msa1374480:CDS |
| CGTGGCCGTGGAAGGGGCAG+GGG | 0.321802 | tig0019487:+160780 | Msa1374480:CDS |
| TGCATGGGGTCGTGCTTTCC+GGG | 0.322620 | tig0019487:+161228 | Msa1374480:CDS |
| CAGAGGGCGTGGCCGTGCAT+GGG | 0.335065 | tig0019487:+161213 | Msa1374480:CDS |
| CGTGGAAGGGGCAGGGGCAG+AGG | 0.342679 | tig0019487:+160786 | Msa1374480:CDS |
| GACGATTACTGAGCTAATTA+AGG | 0.344294 | tig0019487:+159620 | Msa1374480:CDS |
| GTTGATAGGGCTATCTGCCT+TGG | 0.366788 | tig0019487:-159110 | None:intergenic |
| GCGAGGGGCTGGGTGGCTAT+GGG | 0.367507 | tig0019487:-158921 | None:intergenic |
| CTCTTCCCCTTCCACGACCT+TGG | 0.370286 | tig0019487:-161677 | None:intergenic |
| TGCTTACCGCGTGGGGCAGG+TGG | 0.371445 | tig0019487:-161313 | None:intergenic |
| CTCTCTCATGCTTACCGCGT+GGG | 0.372765 | tig0019487:-161321 | None:intergenic |
| GCTATGGTGCCCAGCCGGTT+GGG | 0.375717 | tig0019487:+161263 | Msa1374480:CDS |
| GGCGTGGCCGTGGAAGGGGC+AGG | 0.380319 | tig0019487:+160778 | Msa1374480:CDS |
| ATGGAAGAGAGCGAGGGGCT+GGG | 0.406409 | tig0019487:-158931 | None:intergenic |
| CAGATATCAACCTCCTCTTC+CGG | 0.410668 | tig0019487:+160591 | Msa1374480:intron |
| GGCTATGGTGCCCAGCCGGT+TGG | 0.410845 | tig0019487:+161262 | Msa1374480:CDS |
| TTGATAGGGCTATCTGCCTT+GGG | 0.411012 | tig0019487:-159109 | None:intergenic |
| TCATGCTTACCGCGTGGGGC+AGG | 0.415819 | tig0019487:-161316 | None:intergenic |
| GCTTACCGCGTGGGGCAGGT+GGG | 0.418616 | tig0019487:-161312 | None:intergenic |
| CGTGGAAGGGGAAGAGGCCG+TGG | 0.425270 | tig0019487:+161684 | Msa1374480:CDS |
| GCTCGCCAAGGATGCGAGGA+AGG | 0.425647 | tig0019487:+160754 | Msa1374480:CDS |
| GATGGAAGAGAGCGAGGGGC+TGG | 0.425790 | tig0019487:-158932 | None:intergenic |
| CAAGGTCGTGGAAGGGGAAG+AGG | 0.427428 | tig0019487:+161678 | Msa1374480:CDS |
| TCTTTGTAGGAATGTACAAT+GGG | 0.439627 | tig0019487:+161143 | Msa1374480:intron |
| CGAGGGGCTGGGTGGCTATG+GGG | 0.442196 | tig0019487:-158920 | None:intergenic |
| GCGTGGCCGTGGAAGGGGCA+GGG | 0.447438 | tig0019487:+160779 | Msa1374480:CDS |
| GGCTATGGTGGCAGAGGGCG+TGG | 0.451114 | tig0019487:+161202 | Msa1374480:CDS |
| AGGGGAAGAGGCCGTGGACG+TGG | 0.457525 | tig0019487:+161690 | Msa1374480:CDS |
| TCGCCAAGGATGCGAGGAAG+GGG | 0.461675 | tig0019487:+160756 | Msa1374480:CDS |
| CGTGGACGTGGTCGTGATGC+TGG | 0.462697 | tig0019487:+161702 | Msa1374480:CDS |
| TATGATGGTGGACGTGGCTA+TGG | 0.467843 | tig0019487:+161187 | Msa1374480:CDS |
| GGACGTGGCTATGGTGGCAG+AGG | 0.470972 | tig0019487:+161196 | Msa1374480:CDS |
| CTTACCGCGTGGGGCAGGTG+GGG | 0.471319 | tig0019487:-161311 | None:intergenic |
| CTCGCCAAGGATGCGAGGAA+GGG | 0.475876 | tig0019487:+160755 | Msa1374480:CDS |
| GTTTCTCATCCTTCCTTGAG+TGG | 0.479166 | tig0019487:-159152 | None:intergenic |
| ATCTCTTTCTCTCTCTCCCT+CGG | 0.486916 | tig0019487:+158812 | Msa1374480:five_prime_UTR |
| TTACTTGCAGGCCAAGGTCG+TGG | 0.495476 | tig0019487:+161666 | Msa1374480:intron |
| TACTTTGTCAAAGAAAGAGC+TGG | 0.498781 | tig0019487:+159950 | Msa1374480:CDS |
| TGTCATAATACCCAACCGGC+TGG | 0.498971 | tig0019487:-161273 | None:intergenic |
| GCAGGCCAAGGTCGTGGAAG+GGG | 0.500455 | tig0019487:+161672 | Msa1374480:intron |
| CTCTGCCCCTGCCCCTTCCA+CGG | 0.500854 | tig0019487:-160785 | None:intergenic |
| GTTTGTTAATTCAGATGGAT+AGG | 0.501024 | tig0019487:+159068 | Msa1374480:intron |
| TTCTTTGTAGGAATGTACAA+TGG | 0.504434 | tig0019487:+161142 | Msa1374480:intron |
| CGGGGACGAGGACGTGGCTA+TGG | 0.506197 | tig0019487:+161247 | Msa1374480:CDS |
| CAATGAAAACATACGGAAGA+AGG | 0.509927 | tig0019487:-159815 | None:intergenic |
| GCTTTCCGGGGACGAGGACG+TGG | 0.517005 | tig0019487:+161241 | Msa1374480:CDS |
| GAAATCGTTCTCAAAGCAAT+GGG | 0.517050 | tig0019487:+159576 | Msa1374480:CDS |
| TTTACTTGATCAGCCGGAAG+AGG | 0.519336 | tig0019487:-160604 | None:intergenic |
| TTAAAATTATAAATGTTACA+AGG | 0.524255 | tig0019487:-161849 | None:intergenic |
| CCATTGTCATAATACCCAAC+CGG | 0.524799 | tig0019487:-161277 | None:intergenic |
| GGTCGTGCTTTCCGGGGACG+AGG | 0.525875 | tig0019487:+161235 | Msa1374480:CDS |
| ATTTGAGTCGTTCAGTGTTG+CGG | 0.530588 | tig0019487:+161792 | Msa1374480:three_prime_UTR |
| GAATATGGTGATGGTTATGA+TGG | 0.530946 | tig0019487:+161172 | Msa1374480:CDS |
| CATAGCCACGTCCTCGTCCC+CGG | 0.531366 | tig0019487:-161246 | None:intergenic |
| GTGGTTTCAATTTGAGGCCG+AGG | 0.533096 | tig0019487:-158829 | None:intergenic |
| ACGTGGCTATGGTGCCCAGC+CGG | 0.540009 | tig0019487:+161258 | Msa1374480:CDS |
| AGAGGGCGTGGCCGTGCATG+GGG | 0.540930 | tig0019487:+161214 | Msa1374480:CDS |
| AGCAGCTGCTTAGTTAGAAG+AGG | 0.543321 | tig0019487:+161731 | Msa1374480:exon |
| TCACTCACGCTCAACACAAA+CGG | 0.546528 | tig0019487:+158955 | Msa1374480:five_prime_UTR |
| GAGCTGGATACATCCTCCAC+AGG | 0.550506 | tig0019487:+159966 | Msa1374480:CDS |
| TTGCAGGCCAAGGTCGTGGA+AGG | 0.551070 | tig0019487:+161670 | Msa1374480:intron |
| AGAAATCGTTCTCAAAGCAA+TGG | 0.552556 | tig0019487:+159575 | Msa1374480:CDS |
| TAAAATTATAAATGTTACAA+GGG | 0.558311 | tig0019487:-161848 | None:intergenic |
| GTCATAATACCCAACCGGCT+GGG | 0.558897 | tig0019487:-161272 | None:intergenic |
| GGAAAGCACGACCCCATGCA+CGG | 0.559235 | tig0019487:-161225 | None:intergenic |
| AACTACAAAACCAAAACTGC+AGG | 0.559355 | tig0019487:-161822 | None:intergenic |
| ACTCTGTGAGTTGAGTTGAC+AGG | 0.560519 | tig0019487:-158877 | None:intergenic |
| CAACTGATATAACTGACACA+TGG | 0.565866 | tig0019487:+159775 | Msa1374480:CDS |
| GACGTGGCTATGGTGGCAGA+GGG | 0.566506 | tig0019487:+161197 | Msa1374480:CDS |
| GAGTGAGATGGAAGAGAGCG+AGG | 0.567145 | tig0019487:-158938 | None:intergenic |
| TGGTTTCAATTTGAGGCCGA+GGG | 0.579025 | tig0019487:-158828 | None:intergenic |
| AAAATTATAAATGTTACAAG+GGG | 0.579415 | tig0019487:-161847 | None:intergenic |
| ACATGGGAACCACTTGAAGA+AGG | 0.580775 | tig0019487:+159792 | Msa1374480:CDS |
| GGAAGAAGGCCTTCTTCAAG+TGG | 0.583553 | tig0019487:-159801 | None:intergenic |
| ACCTTTAAATGAATATGAAG+AGG | 0.587328 | tig0019487:+160627 | Msa1374480:CDS |
| GATGGTTATGATGGTGGACG+TGG | 0.587716 | tig0019487:+161181 | Msa1374480:CDS |
| CGCCAAGGATGCGAGGAAGG+GGG | 0.588165 | tig0019487:+160757 | Msa1374480:CDS |
| TTAAATGAATATGAAGAGGA+AGG | 0.589261 | tig0019487:+160631 | Msa1374480:CDS |
| TCCTTCCTTGAGTGGTAATG+CGG | 0.591117 | tig0019487:-159144 | None:intergenic |
| ACTTGATCAGCCGGAAGAGG+AGG | 0.591207 | tig0019487:-160601 | None:intergenic |
| TATGGTGATGGTTATGATGG+TGG | 0.591644 | tig0019487:+161175 | Msa1374480:CDS |
| GCAGCTGCTTAGTTAGAAGA+GGG | 0.593490 | tig0019487:+161732 | Msa1374480:exon |
| GATGGTGGACGTGGCTATGG+TGG | 0.594069 | tig0019487:+161190 | Msa1374480:CDS |
| TGTGTTGAGCGTGAGTGAGA+TGG | 0.600798 | tig0019487:-158950 | None:intergenic |
| AACTGATATAACTGACACAT+GGG | 0.600887 | tig0019487:+159776 | Msa1374480:CDS |
| AAACCAAAACTGCAGGAACA+TGG | 0.602157 | tig0019487:-161815 | None:intergenic |
| AAATAAACAAATAAGCAAAG+AGG | 0.602755 | tig0019487:-161758 | None:intergenic |
| TGCAGGCCAAGGTCGTGGAA+GGG | 0.605445 | tig0019487:+161671 | Msa1374480:intron |
| AATTATAAATGTTACAAGGG+GGG | 0.606874 | tig0019487:-161845 | None:intergenic |
| GAGATCCGCATTACCACTCA+AGG | 0.607382 | tig0019487:+159139 | Msa1374480:CDS |
| GAAGAGAGCGAGGGGCTGGG+TGG | 0.607690 | tig0019487:-158928 | None:intergenic |
| TTCAGATGGATAGGTATCAG+AGG | 0.607820 | tig0019487:+159077 | Msa1374480:intron |
| TCAGATGGATAGGTATCAGA+GGG | 0.613414 | tig0019487:+159078 | Msa1374480:intron |
| TCTCTCATGCTTACCGCGTG+GGG | 0.614307 | tig0019487:-161320 | None:intergenic |
| CCGGTTGGGTATTATGACAA+TGG | 0.619666 | tig0019487:+161277 | Msa1374480:CDS |
| AATGAATATGAAGAGGAAGG+AGG | 0.621567 | tig0019487:+160634 | Msa1374480:CDS |
| GCATGGGGTCGTGCTTTCCG+GGG | 0.624471 | tig0019487:+161229 | Msa1374480:CDS |
| AGTGAGATGGAAGAGAGCGA+GGG | 0.624797 | tig0019487:-158937 | None:intergenic |
| CTAACTAAGCAGCTGCTACA+CGG | 0.626764 | tig0019487:-161725 | None:intergenic |
| GATACACAGAAGGCTCGCCA+AGG | 0.633168 | tig0019487:+160742 | Msa1374480:intron |
| TCCGCATTACCACTCAAGGA+AGG | 0.635560 | tig0019487:+159143 | Msa1374480:CDS |
| CAGCATCACGACCACGTCCA+CGG | 0.637764 | tig0019487:-161701 | None:intergenic |
| GAAGGCTCGCCAAGGATGCG+AGG | 0.639147 | tig0019487:+160750 | Msa1374480:intron |
| GTGAGATGGAAGAGAGCGAG+GGG | 0.643963 | tig0019487:-158936 | None:intergenic |
| TGAAAGTTCATACCCTGTGG+AGG | 0.649730 | tig0019487:-159979 | None:intergenic |
| GAGAGAAAGAGATACACGCG+AGG | 0.650816 | tig0019487:-158802 | None:intergenic |
| TTTGTAGGAATGTACAATGG+GGG | 0.656698 | tig0019487:+161145 | Msa1374480:intron |
| GATGGATAGGTATCAGAGGG+TGG | 0.667174 | tig0019487:+159081 | Msa1374480:intron |
| AAATTATAAATGTTACAAGG+GGG | 0.667194 | tig0019487:-161846 | None:intergenic |
| AGCTGGATACATCCTCCACA+GGG | 0.668533 | tig0019487:+159967 | Msa1374480:CDS |
| TCAGAGGGTGGAGAAACCCA+AGG | 0.675762 | tig0019487:+159093 | Msa1374480:CDS |
| AGAGAAAGAGATACACGCGA+GGG | 0.684655 | tig0019487:-158801 | None:intergenic |
| CTTTGTAGGAATGTACAATG+GGG | 0.692917 | tig0019487:+161144 | Msa1374480:intron |
| GATGCCCCACCTGCCCCACG+CGG | 0.736589 | tig0019487:+161307 | Msa1374480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAAAAAAATCACT+CGG | - | tig0019487:159391-159410 | None:intergenic | 10.0% |
| !! | AAAGGAAATTAAATAATTAT+AGG | + | tig0019487:160934-160953 | Msa1374480:intron | 10.0% |
| !! | AAGGAAATTAAATAATTATA+GGG | + | tig0019487:160935-160954 | Msa1374480:intron | 10.0% |
| !!! | CTTATTTGTTTATTTTATTT+GGG | + | tig0019487:161766-161785 | Msa1374480:three_prime_UTR | 10.0% |
| !! | TAAAATTATAAATGTTACAA+GGG | - | tig0019487:161851-161870 | None:intergenic | 10.0% |
| !! | TTAAAATTATAAATGTTACA+AGG | - | tig0019487:161852-161871 | None:intergenic | 10.0% |
| !!! | TAAAATATGTTATATGTTTT+CGG | + | tig0019487:161962-161981 | Msa1374480:three_prime_UTR | 10.0% |
| !! | AGTGAATTTATTTAGATTAT+AGG | + | tig0019487:159410-159429 | Msa1374480:intron | 15.0% |
| !!! | TATTTCTCTTTTATTTTGTT+TGG | + | tig0019487:159435-159454 | Msa1374480:intron | 15.0% |
| !!! | TCTTAATTCAACTAATATTT+TGG | + | tig0019487:159488-159507 | Msa1374480:intron | 15.0% |
| !!! | TTAACTTTTGTTTTCTATTA+AGG | + | tig0019487:160423-160442 | Msa1374480:intron | 15.0% |
| !!! | TTTTAAAAAAAATCAAAGAC+AGG | - | tig0019487:160672-160691 | None:intergenic | 15.0% |
| !! | TACTTATAAAAAATGTTCAA+AGG | + | tig0019487:160916-160935 | Msa1374480:intron | 15.0% |
| !! | ATAATTATAGGGATTAAATA+TGG | + | tig0019487:160946-160965 | Msa1374480:intron | 15.0% |
| !!! | ATAAGAAAATTGTGTTTTAA+AGG | - | tig0019487:161108-161127 | None:intergenic | 15.0% |
| !!! | GCTTATTTGTTTATTTTATT+TGG | + | tig0019487:161765-161784 | Msa1374480:three_prime_UTR | 15.0% |
| !! | AAAATTATAAATGTTACAAG+GGG | - | tig0019487:161850-161869 | None:intergenic | 15.0% |
| !!! | TTTTCTTATAGAAATTTTTG+CGG | + | tig0019487:161936-161955 | Msa1374480:three_prime_UTR | 15.0% |
| !! | ACAAAATTGGAATATTTATA+GGG | - | tig0019487:161989-162008 | None:intergenic | 15.0% |
| !! | ACATTAATTGAATGAATCTA+GGG | - | tig0019487:158995-159014 | None:intergenic | 20.0% |
| !! | AACATTAATTGAATGAATCT+AGG | - | tig0019487:158996-159015 | None:intergenic | 20.0% |
| !! | GTTTCGATTTAATTGTTTAT+CGG | + | tig0019487:159013-159032 | Msa1374480:intron | 20.0% |
| !!! | TAATATTTTGGTATTTTGTG+TGG | + | tig0019487:159500-159519 | Msa1374480:intron | 20.0% |
| !! | AAGTAACTAAATGTAATCTA+AGG | - | tig0019487:160176-160195 | None:intergenic | 20.0% |
| !! | ACAAAATTATCAAACATAGT+GGG | - | tig0019487:160518-160537 | None:intergenic | 20.0% |
| !! | AACAAAATTATCAAACATAG+TGG | - | tig0019487:160519-160538 | None:intergenic | 20.0% |
| !! | AATGATATATGCAAGAAAAT+AGG | + | tig0019487:160991-161010 | Msa1374480:intron | 20.0% |
| !! | CTACAAAATTTATTCTTTGT+AGG | + | tig0019487:161130-161149 | Msa1374480:intron | 20.0% |
| !! | TTTGATGTTGTATTATCATA+TGG | + | tig0019487:161350-161369 | Msa1374480:intron | 20.0% |
| !! | AAATAAACAAATAAGCAAAG+AGG | - | tig0019487:161761-161780 | None:intergenic | 20.0% |
| !! | AAATTATAAATGTTACAAGG+GGG | - | tig0019487:161849-161868 | None:intergenic | 20.0% |
| !! | CACAAAATTGGAATATTTAT+AGG | - | tig0019487:161990-162009 | None:intergenic | 20.0% |
| !! | TTTGTGTTTGTTAATTCAGA+TGG | + | tig0019487:159063-159082 | Msa1374480:intron | 25.0% |
| !!! | TTAGATTTTTTAATGTTCCG+AGG | + | tig0019487:159312-159331 | Msa1374480:intron | 25.0% |
| !!! | TAGATTTTTTAATGTTCCGA+GGG | + | tig0019487:159313-159332 | Msa1374480:intron | 25.0% |
| ! | TCTGAAAAACATAGACATAT+CGG | - | tig0019487:159716-159735 | None:intergenic | 25.0% |
| ! | GTGAAAACAATGAAAACATA+CGG | - | tig0019487:159825-159844 | None:intergenic | 25.0% |
| !! | TTTATGCCTTATCTTTTGAT+TGG | + | tig0019487:160040-160059 | Msa1374480:intron | 25.0% |
| ! | TTCAATGTAGATTGATAGAA+GGG | + | tig0019487:160344-160363 | Msa1374480:intron | 25.0% |
| ! | TTCTTTAAATGTATTCTCTG+TGG | + | tig0019487:160542-160561 | Msa1374480:intron | 25.0% |
| ! | ACCTTTAAATGAATATGAAG+AGG | + | tig0019487:160627-160646 | Msa1374480:CDS | 25.0% |
| ! | TCCTCTTCATATTCATTTAA+AGG | - | tig0019487:160631-160650 | None:intergenic | 25.0% |
| ! | TTAAATGAATATGAAGAGGA+AGG | + | tig0019487:160631-160650 | Msa1374480:CDS | 25.0% |
| ! | GAAAATAGGAAATATCTACA+TGG | + | tig0019487:161005-161024 | Msa1374480:intron | 25.0% |
| ! | TTCTGATCATTCTACAATAT+AGG | - | tig0019487:161058-161077 | None:intergenic | 25.0% |
| ! | ACTAACAAATAAATACGACA+AGG | - | tig0019487:161501-161520 | None:intergenic | 25.0% |
| !!! | TATTTGTTAGTTTTCTTTGC+TGG | + | tig0019487:161510-161529 | Msa1374480:intron | 25.0% |
| ! | AATTATAAATGTTACAAGGG+GGG | - | tig0019487:161848-161867 | None:intergenic | 25.0% |
| ! | TGTTTTGTGGTTTCAATTTG+AGG | - | tig0019487:158838-158857 | None:intergenic | 30.0% |
| ! | GTTTGTTAATTCAGATGGAT+AGG | + | tig0019487:159068-159087 | Msa1374480:intron | 30.0% |
| AACACTAACTTGAAAAAGAG+TGG | - | tig0019487:159194-159213 | None:intergenic | 30.0% | |
| AATCAATCAATTATGTCCCT+CGG | - | tig0019487:159332-159351 | None:intergenic | 30.0% | |
| ACCAACCAATTTAATCTGTA+GGG | - | tig0019487:159665-159684 | None:intergenic | 30.0% | |
| AAAAACATAGACATATCGGT+CGG | - | tig0019487:159712-159731 | None:intergenic | 30.0% | |
| !! | ATGTCTATGTTTTTCAGAGA+AGG | + | tig0019487:159718-159737 | Msa1374480:intron | 30.0% |
| AACTGATATAACTGACACAT+GGG | + | tig0019487:159776-159795 | Msa1374480:CDS | 30.0% | |
| ! | TTCATTTTACTTGTGCAGTT+TGG | + | tig0019487:159896-159915 | Msa1374480:intron | 30.0% |
| ACTAAGCCAATCAAAAGATA+AGG | - | tig0019487:160049-160068 | None:intergenic | 30.0% | |
| !!! | TTTTTGAAGCAAACCACTTA+AGG | + | tig0019487:160071-160090 | Msa1374480:intron | 30.0% |
| CTTCAATGTAGATTGATAGA+AGG | + | tig0019487:160343-160362 | Msa1374480:intron | 30.0% | |
| TCACTTGTATAAATCATGAC+TGG | - | tig0019487:160485-160504 | None:intergenic | 30.0% | |
| ! | GTGAAAAGTTGTGATTTTCA+TGG | + | tig0019487:160694-160713 | Msa1374480:intron | 30.0% |
| !! | CTGTAATTTTGATACACAGA+AGG | + | tig0019487:160732-160751 | Msa1374480:intron | 30.0% |
| GATTGTATGACTTGAGAATA+AGG | + | tig0019487:160850-160869 | Msa1374480:intron | 30.0% | |
| ! | ATGACTTGAGAATAAGGTTT+TGG | + | tig0019487:160856-160875 | Msa1374480:intron | 30.0% |
| AATAGGAAATATCTACATGG+AGG | + | tig0019487:161008-161027 | Msa1374480:intron | 30.0% | |
| TTCTTTGTAGGAATGTACAA+TGG | + | tig0019487:161142-161161 | Msa1374480:intron | 30.0% | |
| TCTTTGTAGGAATGTACAAT+GGG | + | tig0019487:161143-161162 | Msa1374480:intron | 30.0% | |
| ! | TCTTCTGTCGCTTATTTAAT+AGG | - | tig0019487:161446-161465 | None:intergenic | 30.0% |
| AATACGACAAGGAAAACAAT+TGG | - | tig0019487:161490-161509 | None:intergenic | 30.0% | |
| !!! | GGATATGGGATTTTGTTTTG+TGG | - | tig0019487:158851-158870 | None:intergenic | 35.0% |
| ! | TGAATGAATCTAGGGTTTGA+AGG | - | tig0019487:158987-159006 | None:intergenic | 35.0% |
| ! | GGATCTCATTTTCGTTGATA+GGG | - | tig0019487:159126-159145 | None:intergenic | 35.0% |
| ! | TCTAAAGTCACACATATGAG+TGG | - | tig0019487:159274-159293 | None:intergenic | 35.0% |
| AGAAATCGTTCTCAAAGCAA+TGG | + | tig0019487:159575-159594 | Msa1374480:CDS | 35.0% | |
| GAAATCGTTCTCAAAGCAAT+GGG | + | tig0019487:159576-159595 | Msa1374480:CDS | 35.0% | |
| GACGATTACTGAGCTAATTA+AGG | + | tig0019487:159620-159639 | Msa1374480:CDS | 35.0% | |
| GAGTTCCCTACAGATTAAAT+TGG | + | tig0019487:159657-159676 | Msa1374480:intron | 35.0% | |
| TCCCTACAGATTAAATTGGT+TGG | + | tig0019487:159661-159680 | Msa1374480:intron | 35.0% | |
| CACCAACCAATTTAATCTGT+AGG | - | tig0019487:159666-159685 | None:intergenic | 35.0% | |
| !! | GTTTTTCAGAGAAGGATTGT+TGG | + | tig0019487:159726-159745 | Msa1374480:intron | 35.0% |
| CTGCATCAGAACACTATTAT+TGG | + | tig0019487:159750-159769 | Msa1374480:CDS | 35.0% | |
| CAACTGATATAACTGACACA+TGG | + | tig0019487:159775-159794 | Msa1374480:CDS | 35.0% | |
| CAATGAAAACATACGGAAGA+AGG | - | tig0019487:159818-159837 | None:intergenic | 35.0% | |
| TAGTTTATGTGTGCATAGCA+TGG | + | tig0019487:159862-159881 | Msa1374480:intron | 35.0% | |
| AGTTTATGTGTGCATAGCAT+GGG | + | tig0019487:159863-159882 | Msa1374480:intron | 35.0% | |
| TACTTTGTCAAAGAAAGAGC+TGG | + | tig0019487:159950-159969 | Msa1374480:CDS | 35.0% | |
| AAGCAAACCACTTAAGGATT+AGG | + | tig0019487:160077-160096 | Msa1374480:intron | 35.0% | |
| CATGTTTCCTAATCCTTAAG+TGG | - | tig0019487:160087-160106 | None:intergenic | 35.0% | |
| TAGGAAACATGTTAGCTAAG+TGG | + | tig0019487:160096-160115 | Msa1374480:intron | 35.0% | |
| ATGTTAATCTCAGTCACCAA+CGG | - | tig0019487:160143-160162 | None:intergenic | 35.0% | |
| ! | ATCAAACATAGTGGGAAAGA+CGG | - | tig0019487:160510-160529 | None:intergenic | 35.0% |
| ! | AAAGGTTTTACTTGATCAGC+CGG | - | tig0019487:160613-160632 | None:intergenic | 35.0% |
| AATGAATATGAAGAGGAAGG+AGG | + | tig0019487:160634-160653 | Msa1374480:CDS | 35.0% | |
| TGATGTAGTCAATCACATGT+AGG | - | tig0019487:160972-160991 | None:intergenic | 35.0% | |
| CTTTGTAGGAATGTACAATG+GGG | + | tig0019487:161144-161163 | Msa1374480:intron | 35.0% | |
| TTTGTAGGAATGTACAATGG+GGG | + | tig0019487:161145-161164 | Msa1374480:intron | 35.0% | |
| !! | GAATATGGTGATGGTTATGA+TGG | + | tig0019487:161172-161191 | Msa1374480:CDS | 35.0% |
| AGCGACAGAAGAAAATTACT+TGG | + | tig0019487:161454-161473 | Msa1374480:intron | 35.0% | |
| CTACAACGATTACTCTAGTA+AGG | - | tig0019487:161552-161571 | None:intergenic | 35.0% | |
| ATGCTGTGTTAATTACTTGC+AGG | + | tig0019487:161654-161673 | Msa1374480:intron | 35.0% | |
| AACTACAAAACCAAAACTGC+AGG | - | tig0019487:161825-161844 | None:intergenic | 35.0% | |
| !!! | TTGACAGGTTTTGGGGATAT+GGG | - | tig0019487:158865-158884 | None:intergenic | 40.0% |
| !!! | AGTTGAGTTGACAGGTTTTG+GGG | - | tig0019487:158872-158891 | None:intergenic | 40.0% |
| !!! | GAGTTGAGTTGACAGGTTTT+GGG | - | tig0019487:158873-158892 | None:intergenic | 40.0% |
| !!! | TGAGTTGAGTTGACAGGTTT+TGG | - | tig0019487:158874-158893 | None:intergenic | 40.0% |
| TTCAGATGGATAGGTATCAG+AGG | + | tig0019487:159077-159096 | Msa1374480:intron | 40.0% | |
| TCAGATGGATAGGTATCAGA+GGG | + | tig0019487:159078-159097 | Msa1374480:intron | 40.0% | |
| ! | CGGATCTCATTTTCGTTGAT+AGG | - | tig0019487:159127-159146 | None:intergenic | 40.0% |
| TCACTCGGCAATTAATACAC+TGG | - | tig0019487:159376-159395 | None:intergenic | 40.0% | |
| ! | GCACTATGTGTGTTTTCTGT+AGG | + | tig0019487:159539-159558 | Msa1374480:intron | 40.0% |
| ! | GTGTGTTTTCTGTAGGAGAA+AGG | + | tig0019487:159546-159565 | Msa1374480:intron | 40.0% |
| ACTGAGCTAATTAAGGTGAG+AGG | + | tig0019487:159627-159646 | Msa1374480:intron | 40.0% | |
| CTGAGCTAATTAAGGTGAGA+GGG | + | tig0019487:159628-159647 | Msa1374480:intron | 40.0% | |
| TCATGAAAGTTCATACCCTG+TGG | - | tig0019487:159985-160004 | None:intergenic | 40.0% | |
| GCATTTACACAAACACAGAC+CGG | - | tig0019487:160242-160261 | None:intergenic | 40.0% | |
| ATGTTAGACCCTTGACTTCA+AGG | + | tig0019487:160270-160289 | Msa1374480:intron | 40.0% | |
| ! | TACAATGGGGGTATGGAATA+TGG | + | tig0019487:161157-161176 | Msa1374480:CDS | 40.0% |
| !! | TATGGTGATGGTTATGATGG+TGG | + | tig0019487:161175-161194 | Msa1374480:CDS | 40.0% |
| CCATTGTCATAATACCCAAC+CGG | - | tig0019487:161280-161299 | None:intergenic | 40.0% | |
| TGTTAATTACTTGCAGGCCA+AGG | + | tig0019487:161660-161679 | Msa1374480:intron | 40.0% | |
| ATTTGAGTCGTTCAGTGTTG+CGG | + | tig0019487:161792-161811 | Msa1374480:three_prime_UTR | 40.0% | |
| AAACCAAAACTGCAGGAACA+TGG | - | tig0019487:161818-161837 | None:intergenic | 40.0% | |
| AGAGAAAGAGATACACGCGA+GGG | - | tig0019487:158804-158823 | None:intergenic | 45.0% | |
| ATCTCTTTCTCTCTCTCCCT+CGG | + | tig0019487:158812-158831 | Msa1374480:five_prime_UTR | 45.0% | |
| ! | TGGTTTCAATTTGAGGCCGA+GGG | - | tig0019487:158831-158850 | None:intergenic | 45.0% |
| !!! | GTTGACAGGTTTTGGGGATA+TGG | - | tig0019487:158866-158885 | None:intergenic | 45.0% |
| !! | ACTCTGTGAGTTGAGTTGAC+AGG | - | tig0019487:158880-158899 | None:intergenic | 45.0% |
| TCACTCACGCTCAACACAAA+CGG | + | tig0019487:158955-158974 | Msa1374480:five_prime_UTR | 45.0% | |
| TTGATAGGGCTATCTGCCTT+GGG | - | tig0019487:159112-159131 | None:intergenic | 45.0% | |
| ! | TCCTTCCTTGAGTGGTAATG+CGG | - | tig0019487:159147-159166 | None:intergenic | 45.0% |
| GTTTCTCATCCTTCCTTGAG+TGG | - | tig0019487:159155-159174 | None:intergenic | 45.0% | |
| ACATGGGAACCACTTGAAGA+AGG | + | tig0019487:159792-159811 | Msa1374480:CDS | 45.0% | |
| TGAAAGTTCATACCCTGTGG+AGG | - | tig0019487:159982-160001 | None:intergenic | 45.0% | |
| ACCACACTCCTTGAAGTCAA+GGG | - | tig0019487:160281-160300 | None:intergenic | 45.0% | |
| TACCACACTCCTTGAAGTCA+AGG | - | tig0019487:160282-160301 | None:intergenic | 45.0% | |
| CAGATATCAACCTCCTCTTC+CGG | + | tig0019487:160591-160610 | Msa1374480:intron | 45.0% | |
| TTTACTTGATCAGCCGGAAG+AGG | - | tig0019487:160607-160626 | None:intergenic | 45.0% | |
| AGGAATGTACAATGGGGGTA+TGG | + | tig0019487:161150-161169 | Msa1374480:intron | 45.0% | |
| CCGGTTGGGTATTATGACAA+TGG | + | tig0019487:161277-161296 | Msa1374480:CDS | 45.0% | |
| CTAACTAAGCAGCTGCTACA+CGG | - | tig0019487:161728-161747 | None:intergenic | 45.0% | |
| AGCAGCTGCTTAGTTAGAAG+AGG | + | tig0019487:161731-161750 | Msa1374480:exon | 45.0% | |
| GCAGCTGCTTAGTTAGAAGA+GGG | + | tig0019487:161732-161751 | Msa1374480:exon | 45.0% | |
| GAGAGAAAGAGATACACGCG+AGG | - | tig0019487:158805-158824 | None:intergenic | 50.0% | |
| ! | GTGGTTTCAATTTGAGGCCG+AGG | - | tig0019487:158832-158851 | None:intergenic | 50.0% |
| AGTGAGATGGAAGAGAGCGA+GGG | - | tig0019487:158940-158959 | None:intergenic | 50.0% | |
| TGTGTTGAGCGTGAGTGAGA+TGG | - | tig0019487:158953-158972 | None:intergenic | 50.0% | |
| GATGGATAGGTATCAGAGGG+TGG | + | tig0019487:159081-159100 | Msa1374480:intron | 50.0% | |
| ! | GTTGATAGGGCTATCTGCCT+TGG | - | tig0019487:159113-159132 | None:intergenic | 50.0% |
| GAGATCCGCATTACCACTCA+AGG | + | tig0019487:159139-159158 | Msa1374480:CDS | 50.0% | |
| TCCGCATTACCACTCAAGGA+AGG | + | tig0019487:159143-159162 | Msa1374480:CDS | 50.0% | |
| GGAAGAAGGCCTTCTTCAAG+TGG | - | tig0019487:159804-159823 | None:intergenic | 50.0% | |
| AGCTGGATACATCCTCCACA+GGG | + | tig0019487:159967-159986 | Msa1374480:CDS | 50.0% | |
| ACACTTCAGAGTGAAGCCGT+TGG | + | tig0019487:160124-160143 | Msa1374480:intron | 50.0% | |
| ! | CCATGTGTTACTGCTGTGTC+CGG | + | tig0019487:160220-160239 | Msa1374480:intron | 50.0% |
| ACCCTTGACTTCAAGGAGTG+TGG | + | tig0019487:160277-160296 | Msa1374480:intron | 50.0% | |
| ! | GGGGGTATGGAATATGGTGA+TGG | + | tig0019487:161163-161182 | Msa1374480:CDS | 50.0% |
| !! | GATGGTTATGATGGTGGACG+TGG | + | tig0019487:161181-161200 | Msa1374480:CDS | 50.0% |
| !! | TATGATGGTGGACGTGGCTA+TGG | + | tig0019487:161187-161206 | Msa1374480:CDS | 50.0% |
| GTCATAATACCCAACCGGCT+GGG | - | tig0019487:161275-161294 | None:intergenic | 50.0% | |
| TGTCATAATACCCAACCGGC+TGG | - | tig0019487:161276-161295 | None:intergenic | 50.0% | |
| GTGAGATGGAAGAGAGCGAG+GGG | - | tig0019487:158939-158958 | None:intergenic | 55.0% | |
| GAGTGAGATGGAAGAGAGCG+AGG | - | tig0019487:158941-158960 | None:intergenic | 55.0% | |
| TCAGAGGGTGGAGAAACCCA+AGG | + | tig0019487:159093-159112 | Msa1374480:CDS | 55.0% | |
| GAGCTGGATACATCCTCCAC+AGG | + | tig0019487:159966-159985 | Msa1374480:CDS | 55.0% | |
| CCGGACACAGCAGTAACACA+TGG | - | tig0019487:160223-160242 | None:intergenic | 55.0% | |
| ACTTGATCAGCCGGAAGAGG+AGG | - | tig0019487:160604-160623 | None:intergenic | 55.0% | |
| GATACACAGAAGGCTCGCCA+AGG | + | tig0019487:160742-160761 | Msa1374480:intron | 55.0% | |
| TCTCTCATGCTTACCGCGTG+GGG | - | tig0019487:161323-161342 | None:intergenic | 55.0% | |
| CTCTCTCATGCTTACCGCGT+GGG | - | tig0019487:161324-161343 | None:intergenic | 55.0% | |
| TTACTTGCAGGCCAAGGTCG+TGG | + | tig0019487:161666-161685 | Msa1374480:intron | 55.0% | |
| ! | CGGCCATGTTCCTGCAGTTT+TGG | + | tig0019487:161812-161831 | Msa1374480:three_prime_UTR | 55.0% |
| ATGGAAGAGAGCGAGGGGCT+GGG | - | tig0019487:158934-158953 | None:intergenic | 60.0% | |
| CTCGCCAAGGATGCGAGGAA+GGG | + | tig0019487:160755-160774 | Msa1374480:CDS | 60.0% | |
| TCGCCAAGGATGCGAGGAAG+GGG | + | tig0019487:160756-160775 | Msa1374480:CDS | 60.0% | |
| !! | GATGGTGGACGTGGCTATGG+TGG | + | tig0019487:161190-161209 | Msa1374480:CDS | 60.0% |
| GACGTGGCTATGGTGGCAGA+GGG | + | tig0019487:161197-161216 | Msa1374480:CDS | 60.0% | |
| ! | GGAAAGCACGACCCCATGCA+CGG | - | tig0019487:161228-161247 | None:intergenic | 60.0% |
| GTGCATGGGGTCGTGCTTTC+CGG | + | tig0019487:161227-161246 | Msa1374480:CDS | 60.0% | |
| TGCATGGGGTCGTGCTTTCC+GGG | + | tig0019487:161228-161247 | Msa1374480:CDS | 60.0% | |
| GCTCTCTCATGCTTACCGCG+TGG | - | tig0019487:161325-161344 | None:intergenic | 60.0% | |
| TTGCAGGCCAAGGTCGTGGA+AGG | + | tig0019487:161670-161689 | Msa1374480:intron | 60.0% | |
| TGCAGGCCAAGGTCGTGGAA+GGG | + | tig0019487:161671-161690 | Msa1374480:intron | 60.0% | |
| CTCTTCCCCTTCCACGACCT+TGG | - | tig0019487:161680-161699 | None:intergenic | 60.0% | |
| CAAGGTCGTGGAAGGGGAAG+AGG | + | tig0019487:161678-161697 | Msa1374480:CDS | 60.0% | |
| CAGCATCACGACCACGTCCA+CGG | - | tig0019487:161704-161723 | None:intergenic | 60.0% | |
| GATGGAAGAGAGCGAGGGGC+TGG | - | tig0019487:158935-158954 | None:intergenic | 65.0% | |
| GAAGGCTCGCCAAGGATGCG+AGG | + | tig0019487:160750-160769 | Msa1374480:intron | 65.0% | |
| GCTCGCCAAGGATGCGAGGA+AGG | + | tig0019487:160754-160773 | Msa1374480:CDS | 65.0% | |
| CGCCAAGGATGCGAGGAAGG+GGG | + | tig0019487:160757-160776 | Msa1374480:CDS | 65.0% | |
| GGACGTGGCTATGGTGGCAG+AGG | + | tig0019487:161196-161215 | Msa1374480:CDS | 65.0% | |
| GCATGGGGTCGTGCTTTCCG+GGG | + | tig0019487:161229-161248 | Msa1374480:CDS | 65.0% | |
| CATAGCCACGTCCTCGTCCC+CGG | - | tig0019487:161249-161268 | None:intergenic | 65.0% | |
| ACGTGGCTATGGTGCCCAGC+CGG | + | tig0019487:161258-161277 | Msa1374480:CDS | 65.0% | |
| GCTATGGTGCCCAGCCGGTT+GGG | + | tig0019487:161263-161282 | Msa1374480:CDS | 65.0% | |
| TCATGCTTACCGCGTGGGGC+AGG | - | tig0019487:161319-161338 | None:intergenic | 65.0% | |
| GCAGGCCAAGGTCGTGGAAG+GGG | + | tig0019487:161672-161691 | Msa1374480:intron | 65.0% | |
| CGTGGACGTGGTCGTGATGC+TGG | + | tig0019487:161702-161721 | Msa1374480:CDS | 65.0% | |
| CGAGGGGCTGGGTGGCTATG+GGG | - | tig0019487:158923-158942 | None:intergenic | 70.0% | |
| GCGAGGGGCTGGGTGGCTAT+GGG | - | tig0019487:158924-158943 | None:intergenic | 70.0% | |
| AGCGAGGGGCTGGGTGGCTA+TGG | - | tig0019487:158925-158944 | None:intergenic | 70.0% | |
| GAAGAGAGCGAGGGGCTGGG+TGG | - | tig0019487:158931-158950 | None:intergenic | 70.0% | |
| CGCCCCCTTCCTCGCATCCT+TGG | - | tig0019487:160762-160781 | None:intergenic | 70.0% | |
| AGGATGCGAGGAAGGGGGCG+TGG | + | tig0019487:160762-160781 | Msa1374480:CDS | 70.0% | |
| ! | AAGGGGGCGTGGCCGTGGAA+GGG | + | tig0019487:160773-160792 | Msa1374480:CDS | 70.0% |
| CTCTGCCCCTGCCCCTTCCA+CGG | - | tig0019487:160788-160807 | None:intergenic | 70.0% | |
| AGGGGCAGGGGCAGAGGTAG+AGG | + | tig0019487:160792-160811 | Msa1374480:CDS | 70.0% | |
| GGCTATGGTGGCAGAGGGCG+TGG | + | tig0019487:161202-161221 | Msa1374480:CDS | 70.0% | |
| ! | CAGAGGGCGTGGCCGTGCAT+GGG | + | tig0019487:161213-161232 | Msa1374480:CDS | 70.0% |
| ! | AGAGGGCGTGGCCGTGCATG+GGG | + | tig0019487:161214-161233 | Msa1374480:CDS | 70.0% |
| GGTCGTGCTTTCCGGGGACG+AGG | + | tig0019487:161235-161254 | Msa1374480:CDS | 70.0% | |
| GCTTTCCGGGGACGAGGACG+TGG | + | tig0019487:161241-161260 | Msa1374480:CDS | 70.0% | |
| CGGGGACGAGGACGTGGCTA+TGG | + | tig0019487:161247-161266 | Msa1374480:CDS | 70.0% | |
| GGCTATGGTGCCCAGCCGGT+TGG | + | tig0019487:161262-161281 | Msa1374480:CDS | 70.0% | |
| CTTACCGCGTGGGGCAGGTG+GGG | - | tig0019487:161314-161333 | None:intergenic | 70.0% | |
| GCTTACCGCGTGGGGCAGGT+GGG | - | tig0019487:161315-161334 | None:intergenic | 70.0% | |
| TGCTTACCGCGTGGGGCAGG+TGG | - | tig0019487:161316-161335 | None:intergenic | 70.0% | |
| CGTGGAAGGGGAAGAGGCCG+TGG | + | tig0019487:161684-161703 | Msa1374480:CDS | 70.0% | |
| AGGGGAAGAGGCCGTGGACG+TGG | + | tig0019487:161690-161709 | Msa1374480:CDS | 70.0% | |
| ! | GAAGGGGGCGTGGCCGTGGA+AGG | + | tig0019487:160772-160791 | Msa1374480:CDS | 75.0% |
| ! | AGGGGGCGTGGCCGTGGAAG+GGG | + | tig0019487:160774-160793 | Msa1374480:CDS | 75.0% |
| GCGTGGCCGTGGAAGGGGCA+GGG | + | tig0019487:160779-160798 | Msa1374480:CDS | 75.0% | |
| CGTGGCCGTGGAAGGGGCAG+GGG | + | tig0019487:160780-160799 | Msa1374480:CDS | 75.0% | |
| CGTGGAAGGGGCAGGGGCAG+AGG | + | tig0019487:160786-160805 | Msa1374480:CDS | 75.0% | |
| ! | GCAGAGGGCGTGGCCGTGCA+TGG | + | tig0019487:161212-161231 | Msa1374480:CDS | 75.0% |
| GATGCCCCACCTGCCCCACG+CGG | + | tig0019487:161307-161326 | Msa1374480:CDS | 75.0% | |
| !! | CGAGGAAGGGGGCGTGGCCG+TGG | + | tig0019487:160768-160787 | Msa1374480:CDS | 80.0% |
| ! | GGCGTGGCCGTGGAAGGGGC+AGG | + | tig0019487:160778-160797 | Msa1374480:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019487 | gene | 158793 | 162020 | 158793 | ID=Msa1374480;Name=Msa1374480 |
| tig0019487 | mRNA | 158793 | 162020 | 158793 | ID=Msa1374480-mRNA-1;Parent=Msa1374480;Name=Msa1374480-mRNA-1;_AED=0.22;_eAED=0.22;_QI=184|1|1|1|0.87|0.88|9|277|245 |
| tig0019487 | exon | 158793 | 158976 | 158793 | ID=Msa1374480-mRNA-1:exon:3918;Parent=Msa1374480-mRNA-1 |
| tig0019487 | exon | 159082 | 159204 | 159082 | ID=Msa1374480-mRNA-1:exon:3919;Parent=Msa1374480-mRNA-1 |
| tig0019487 | exon | 159561 | 159641 | 159561 | ID=Msa1374480-mRNA-1:exon:3920;Parent=Msa1374480-mRNA-1 |
| tig0019487 | exon | 159735 | 159823 | 159735 | ID=Msa1374480-mRNA-1:exon:3921;Parent=Msa1374480-mRNA-1 |
| tig0019487 | exon | 159914 | 159988 | 159914 | ID=Msa1374480-mRNA-1:exon:3922;Parent=Msa1374480-mRNA-1 |
| tig0019487 | exon | 160594 | 160655 | 160594 | ID=Msa1374480-mRNA-1:exon:3923;Parent=Msa1374480-mRNA-1 |
| tig0019487 | exon | 160751 | 160813 | 160751 | ID=Msa1374480-mRNA-1:exon:3924;Parent=Msa1374480-mRNA-1 |
| tig0019487 | exon | 161152 | 161328 | 161152 | ID=Msa1374480-mRNA-1:exon:3925;Parent=Msa1374480-mRNA-1 |
| tig0019487 | exon | 161676 | 162020 | 161676 | ID=Msa1374480-mRNA-1:exon:3926;Parent=Msa1374480-mRNA-1 |
| tig0019487 | five_prime_UTR | 158793 | 158976 | 158793 | ID=Msa1374480-mRNA-1:five_prime_utr;Parent=Msa1374480-mRNA-1 |
| tig0019487 | CDS | 159082 | 159204 | 159082 | ID=Msa1374480-mRNA-1:cds;Parent=Msa1374480-mRNA-1 |
| tig0019487 | CDS | 159561 | 159641 | 159561 | ID=Msa1374480-mRNA-1:cds;Parent=Msa1374480-mRNA-1 |
| tig0019487 | CDS | 159735 | 159823 | 159735 | ID=Msa1374480-mRNA-1:cds;Parent=Msa1374480-mRNA-1 |
| tig0019487 | CDS | 159914 | 159988 | 159914 | ID=Msa1374480-mRNA-1:cds;Parent=Msa1374480-mRNA-1 |
| tig0019487 | CDS | 160594 | 160655 | 160594 | ID=Msa1374480-mRNA-1:cds;Parent=Msa1374480-mRNA-1 |
| tig0019487 | CDS | 160751 | 160813 | 160751 | ID=Msa1374480-mRNA-1:cds;Parent=Msa1374480-mRNA-1 |
| tig0019487 | CDS | 161152 | 161328 | 161152 | ID=Msa1374480-mRNA-1:cds;Parent=Msa1374480-mRNA-1 |
| tig0019487 | CDS | 161676 | 161743 | 161676 | ID=Msa1374480-mRNA-1:cds;Parent=Msa1374480-mRNA-1 |
| tig0019487 | three_prime_UTR | 161744 | 162020 | 161744 | ID=Msa1374480-mRNA-1:three_prime_utr;Parent=Msa1374480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
