Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0648520 | XP_013456645.1 | 97.319 | 858 | 23 | 0 | 1 | 858 | 1 | 858 | 0.0 | 1629 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0648520 | sp|Q9LFE4|Y5673_ARATH | 52.558 | 860 | 357 | 19 | 20 | 858 | 24 | 853 | 0.0 | 635 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0008290 | Msa0648520 | 0.817723 | 2.844558e-52 | -8.615850e-47 |
Msa0014570 | Msa0648520 | 0.838075 | 3.565851e-57 | -8.615850e-47 |
Msa0021810 | Msa0648520 | 0.804855 | 1.768295e-49 | -8.615850e-47 |
Msa0022310 | Msa0648520 | 0.838599 | 2.613325e-57 | -8.615850e-47 |
Msa0027390 | Msa0648520 | 0.851873 | 6.683570e-61 | -8.615850e-47 |
Msa0030280 | Msa0648520 | 0.807806 | 4.223070e-50 | -8.615850e-47 |
Msa0032370 | Msa0648520 | 0.808320 | 3.282624e-50 | -8.615850e-47 |
Msa0039250 | Msa0648520 | 0.814171 | 1.764789e-51 | -8.615850e-47 |
Msa0048000 | Msa0648520 | 0.808153 | 3.561732e-50 | -8.615850e-47 |
Msa0055070 | Msa0648520 | 0.833082 | 6.542528e-56 | -8.615850e-47 |
Msa0057300 | Msa0648520 | 0.803803 | 2.928591e-49 | -8.615850e-47 |
Msa0076750 | Msa0648520 | 0.812438 | 4.239740e-51 | -8.615850e-47 |
Msa0077450 | Msa0648520 | 0.832315 | 1.014185e-55 | -8.615850e-47 |
Msa0077880 | Msa0648520 | 0.800510 | 1.393613e-48 | -8.615850e-47 |
Msa0101020 | Msa0648520 | 0.826976 | 2.018554e-54 | -8.615850e-47 |
Msa0101810 | Msa0648520 | -0.831131 | 1.986432e-55 | -8.615850e-47 |
Msa0101880 | Msa0648520 | 0.806986 | 6.302278e-50 | -8.615850e-47 |
Msa0102750 | Msa0648520 | 0.801167 | 1.023079e-48 | -8.615850e-47 |
Msa0105420 | Msa0648520 | 0.802764 | 4.805400e-49 | -8.615850e-47 |
Msa0114540 | Msa0648520 | -0.817371 | 3.413820e-52 | -8.615850e-47 |
Msa0118000 | Msa0648520 | 0.821318 | 4.304204e-53 | -8.615850e-47 |
Msa0608200 | Msa0648520 | 0.916663 | 1.358310e-85 | -8.615850e-47 |
Msa0619180 | Msa0648520 | 0.817173 | 3.782061e-52 | -8.615850e-47 |
Msa0626280 | Msa0648520 | 0.825634 | 4.211041e-54 | -8.615850e-47 |
Msa0629630 | Msa0648520 | 0.808462 | 3.060702e-50 | -8.615850e-47 |
Msa0638340 | Msa0648520 | 0.826493 | 2.631493e-54 | -8.615850e-47 |
Msa0647130 | Msa0648520 | 0.810136 | 1.339091e-50 | -8.615850e-47 |
Msa0648520 | Msa0658570 | 0.820440 | 6.850040e-53 | -8.615850e-47 |
Msa0648520 | Msa0677080 | 0.808390 | 3.170964e-50 | -8.615850e-47 |
Msa0648520 | Msa0689760 | 0.801678 | 8.038162e-49 | -8.615850e-47 |
Msa0648520 | Msa0691050 | 0.969482 | 3.458170e-130 | -8.615850e-47 |
Msa0648520 | Msa0693380 | 0.819835 | 9.427681e-53 | -8.615850e-47 |
Msa0648520 | Msa0702570 | 0.804784 | 1.829186e-49 | -8.615850e-47 |
Msa0648520 | Msa0703490 | 0.808225 | 3.438481e-50 | -8.615850e-47 |
Msa0648520 | Msa0715110 | 0.800223 | 1.594395e-48 | -8.615850e-47 |
Msa0648520 | Msa0716860 | 0.813929 | 1.995547e-51 | -8.615850e-47 |
Msa0648520 | Msa0716970 | 0.817791 | 2.745851e-52 | -8.615850e-47 |
Msa0648520 | Msa0717020 | 0.801544 | 8.566286e-49 | -8.615850e-47 |
Msa0648520 | Msa0718070 | 0.822240 | 2.633730e-53 | -8.615850e-47 |
Msa0648520 | Msa0735160 | 0.824857 | 6.430259e-54 | -8.615850e-47 |
Msa0648520 | Msa0737570 | 0.834494 | 2.902554e-56 | -8.615850e-47 |
Msa0648520 | Msa0743680 | 0.853635 | 2.098290e-61 | -8.615850e-47 |
Msa0648520 | Msa0744040 | 0.811304 | 7.487050e-51 | -8.615850e-47 |
Msa0648520 | Msa0751260 | 0.813603 | 2.354229e-51 | -8.615850e-47 |
Msa0648520 | Msa0753770 | 0.815231 | 1.027990e-51 | -8.615850e-47 |
Msa0648520 | Msa0754720 | -0.817536 | 3.133855e-52 | -8.615850e-47 |
Msa0648520 | Msa0756530 | 0.815651 | 8.289867e-52 | -8.615850e-47 |
Msa0648520 | Msa0756630 | -0.832385 | 9.742088e-56 | -8.615850e-47 |
Msa0648520 | Msa0757800 | 0.821199 | 4.584875e-53 | -8.615850e-47 |
Msa0648520 | Msa0764130 | -0.813372 | 2.645950e-51 | -8.615850e-47 |
Msa0648520 | Msa0784620 | 0.862346 | 5.408593e-64 | -8.615850e-47 |
Msa0648520 | Msa0787850 | 0.804056 | 2.594623e-49 | -8.615850e-47 |
Msa0648520 | Msa0795070 | 0.833128 | 6.370130e-56 | -8.615850e-47 |
Msa0648520 | Msa0795390 | 0.840441 | 8.678103e-58 | -8.615850e-47 |
Msa0648520 | Msa0800770 | 0.843816 | 1.110066e-58 | -8.615850e-47 |
Msa0648520 | Msa0802090 | -0.806662 | 7.377476e-50 | -8.615850e-47 |
Msa0648520 | Msa0802470 | -0.814211 | 1.729073e-51 | -8.615850e-47 |
Msa0648520 | Msa0809740 | 0.810572 | 1.078196e-50 | -8.615850e-47 |
Msa0648520 | Msa0811130 | 0.808191 | 3.495747e-50 | -8.615850e-47 |
Msa0648520 | Msa0824660 | 0.807107 | 5.940857e-50 | -8.615850e-47 |
Msa0648520 | Msa0824730 | 0.829160 | 6.013855e-55 | -8.615850e-47 |
Msa0648520 | Msa0829620 | 0.820023 | 8.536899e-53 | -8.615850e-47 |
Msa0648520 | Msa0838930 | 0.838985 | 2.076900e-57 | -8.615850e-47 |
Msa0648520 | Msa0843780 | -0.812717 | 3.682968e-51 | -8.615850e-47 |
Msa0648520 | Msa0844240 | 0.810132 | 1.341671e-50 | -8.615850e-47 |
Msa0648520 | Msa0849330 | 0.810468 | 1.135516e-50 | -8.615850e-47 |
Msa0648520 | Msa0856920 | 0.824645 | 7.216556e-54 | -8.615850e-47 |
Msa0648520 | Msa0861510 | 0.808916 | 2.447507e-50 | -8.615850e-47 |
Msa0648520 | Msa0861530 | 0.823443 | 1.381161e-53 | -8.615850e-47 |
Msa0648520 | Msa0861600 | 0.810445 | 1.148401e-50 | -8.615850e-47 |
Msa0648520 | Msa0863370 | 0.814690 | 1.355095e-51 | -8.615850e-47 |
Msa0648520 | Msa0863800 | 0.857951 | 1.149873e-62 | -8.615850e-47 |
Msa0648520 | Msa0863930 | 0.815022 | 1.143512e-51 | -8.615850e-47 |
Msa0648520 | Msa0867890 | 0.807304 | 5.396411e-50 | -8.615850e-47 |
Msa0648520 | Msa0870530 | 0.808655 | 2.783366e-50 | -8.615850e-47 |
Msa0648520 | Msa0873860 | 0.811730 | 6.048720e-51 | -8.615850e-47 |
Msa0648520 | Msa0881480 | 0.808862 | 2.513933e-50 | -8.615850e-47 |
Msa0648520 | Msa0891040 | 0.815976 | 7.013324e-52 | -8.615850e-47 |
Msa0648520 | Msa0893810 | 0.801589 | 8.386388e-49 | -8.615850e-47 |
Msa0648520 | Msa0903700 | 0.807061 | 6.075188e-50 | -8.615850e-47 |
Msa0648520 | Msa0906690 | 0.804176 | 2.449550e-49 | -8.615850e-47 |
Msa0648520 | Msa0908050 | 0.807836 | 4.160249e-50 | -8.615850e-47 |
Msa0648520 | Msa0926890 | 0.807294 | 5.421878e-50 | -8.615850e-47 |
Msa0648520 | Msa0929950 | 0.813191 | 2.900073e-51 | -8.615850e-47 |
Msa0648520 | Msa0930780 | 0.828959 | 6.724880e-55 | -8.615850e-47 |
Msa0648520 | Msa0930910 | -0.816325 | 5.862788e-52 | -8.615850e-47 |
Msa0648520 | Msa0933440 | 0.813725 | 2.213158e-51 | -8.615850e-47 |
Msa0648520 | Msa0947530 | -0.803122 | 4.053380e-49 | -8.615850e-47 |
Msa0648520 | Msa0948300 | 0.804471 | 2.126604e-49 | -8.615850e-47 |
Msa0648520 | Msa0959010 | 0.816544 | 5.236623e-52 | -8.615850e-47 |
Msa0648520 | Msa0964130 | 0.802835 | 4.645961e-49 | -8.615850e-47 |
Msa0648520 | Msa0975940 | 0.826074 | 3.311622e-54 | -8.615850e-47 |
Msa0648520 | Msa0990960 | 0.812233 | 4.698882e-51 | -8.615850e-47 |
Msa0648520 | Msa0993530 | 0.813294 | 2.752547e-51 | -8.615850e-47 |
Msa0648520 | Msa1004420 | 0.807679 | 4.493565e-50 | -8.615850e-47 |
Msa0648520 | Msa1010070 | 0.838274 | 3.170582e-57 | -8.615850e-47 |
Msa0648520 | Msa1021510 | 0.815670 | 8.209355e-52 | -8.615850e-47 |
Msa0648520 | Msa1024740 | 0.816137 | 6.455977e-52 | -8.615850e-47 |
Msa0648520 | Msa1027630 | 0.830509 | 2.821696e-55 | -8.615850e-47 |
Msa0648520 | Msa1031820 | 0.815787 | 7.729329e-52 | -8.615850e-47 |
Msa0648520 | Msa1033660 | 0.807624 | 4.616375e-50 | -8.615850e-47 |
Msa0648520 | Msa1037650 | -0.829512 | 4.937816e-55 | -8.615850e-47 |
Msa0648520 | Msa1038080 | 0.805835 | 1.102064e-49 | -8.615850e-47 |
Msa0648520 | Msa1040120 | 0.847412 | 1.175766e-59 | -8.615850e-47 |
Msa0648520 | Msa1051600 | 0.814137 | 1.795640e-51 | -8.615850e-47 |
Msa0648520 | Msa1058580 | 0.803360 | 3.618616e-49 | -8.615850e-47 |
Msa0648520 | Msa1070840 | 0.808219 | 3.449122e-50 | -8.615850e-47 |
Msa0648520 | Msa1080160 | 0.816132 | 6.474150e-52 | -8.615850e-47 |
Msa0648520 | Msa1084260 | 0.817506 | 3.184081e-52 | -8.615850e-47 |
Msa0648520 | Msa1102770 | 0.807710 | 4.425036e-50 | -8.615850e-47 |
Msa0648520 | Msa1111110 | 0.818335 | 2.068684e-52 | -8.615850e-47 |
Msa0648520 | Msa1118610 | 0.804898 | 1.732112e-49 | -8.615850e-47 |
Msa0648520 | Msa1118760 | 0.830271 | 3.226925e-55 | -8.615850e-47 |
Msa0648520 | Msa1121400 | 0.827271 | 1.715273e-54 | -8.615850e-47 |
Msa0648520 | Msa1123150 | 0.810190 | 1.303927e-50 | -8.615850e-47 |
Msa0648520 | Msa1127770 | 0.803578 | 3.260727e-49 | -8.615850e-47 |
Msa0648520 | Msa1133220 | 0.806899 | 6.574719e-50 | -8.615850e-47 |
Msa0648520 | Msa1139890 | 0.819391 | 1.190185e-52 | -8.615850e-47 |
Msa0648520 | Msa1143620 | 0.802806 | 4.710514e-49 | -8.615850e-47 |
Msa0648520 | Msa1151000 | 0.812011 | 5.253781e-51 | -8.615850e-47 |
Msa0648520 | Msa1152510 | 0.853144 | 2.900974e-61 | -8.615850e-47 |
Msa0648520 | Msa1158310 | 0.813671 | 2.274467e-51 | -8.615850e-47 |
Msa0648520 | Msa1158660 | 0.847203 | 1.341848e-59 | -8.615850e-47 |
Msa0648520 | Msa1162830 | 0.813725 | 2.213268e-51 | -8.615850e-47 |
Msa0648520 | Msa1179940 | 0.811581 | 6.516032e-51 | -8.615850e-47 |
Msa0648520 | Msa1179970 | 0.816520 | 5.301647e-52 | -8.615850e-47 |
Msa0648520 | Msa1185540 | 0.827548 | 1.472539e-54 | -8.615850e-47 |
Msa0648520 | Msa1188720 | 0.814459 | 1.523982e-51 | -8.615850e-47 |
Msa0648520 | Msa1198880 | 0.801568 | 8.469073e-49 | -8.615850e-47 |
Msa0648520 | Msa1208890 | -0.804804 | 1.811544e-49 | -8.615850e-47 |
Msa0648520 | Msa1221900 | 0.805534 | 1.274689e-49 | -8.615850e-47 |
Msa0648520 | Msa1224830 | 0.806231 | 9.093765e-50 | -8.615850e-47 |
Msa0648520 | Msa1229600 | 0.809721 | 1.644815e-50 | -8.615850e-47 |
Msa0648520 | Msa1231550 | 0.825823 | 3.798187e-54 | -8.615850e-47 |
Msa0648520 | Msa1231930 | 0.834618 | 2.700714e-56 | -8.615850e-47 |
Msa0648520 | Msa1259070 | -0.800030 | 1.745021e-48 | -8.615850e-47 |
Msa0648520 | Msa1262960 | 0.803267 | 3.783024e-49 | -8.615850e-47 |
Msa0648520 | Msa1265070 | 0.812491 | 4.128381e-51 | -8.615850e-47 |
Msa0648520 | Msa1274060 | 0.809658 | 1.696886e-50 | -8.615850e-47 |
Msa0648520 | Msa1274280 | 0.816331 | 5.843803e-52 | -8.615850e-47 |
Msa0648520 | Msa1284300 | 0.804487 | 2.109832e-49 | -8.615850e-47 |
Msa0648520 | Msa1286550 | 0.827608 | 1.424149e-54 | -8.615850e-47 |
Msa0648520 | Msa1288450 | 0.802132 | 6.486592e-49 | -8.615850e-47 |
Msa0648520 | Msa1302060 | 0.828521 | 8.586481e-55 | -8.615850e-47 |
Msa0648520 | Msa1310210 | 0.806845 | 6.750353e-50 | -8.615850e-47 |
Msa0648520 | Msa1311960 | 0.822707 | 2.051122e-53 | -8.615850e-47 |
Msa0648520 | Msa1317580 | 0.817647 | 2.958653e-52 | -8.615850e-47 |
Msa0648520 | Msa1319650 | 0.812756 | 3.612341e-51 | -8.615850e-47 |
Msa0648520 | Msa1323670 | 0.809300 | 2.025976e-50 | -8.615850e-47 |
Msa0648520 | Msa1331590 | 0.818896 | 1.542947e-52 | -8.615850e-47 |
Msa0648520 | Msa1332000 | 0.813427 | 2.574425e-51 | -8.615850e-47 |
Msa0648520 | Msa1337730 | 0.829169 | 5.984322e-55 | -8.615850e-47 |
Msa0648520 | Msa1340040 | -0.820875 | 5.443357e-53 | -8.615850e-47 |
Msa0648520 | Msa1340510 | 0.810041 | 1.403712e-50 | -8.615850e-47 |
Msa0648520 | Msa1360890 | -0.833020 | 6.777954e-56 | -8.615850e-47 |
Msa0648520 | Msa1362510 | 0.805465 | 1.317488e-49 | -8.615850e-47 |
Msa0648520 | Msa1365760 | 0.835988 | 1.217271e-56 | -8.615850e-47 |
Msa0648520 | Msa1366300 | 0.832171 | 1.100642e-55 | -8.615850e-47 |
Msa0648520 | Msa1376890 | 0.819968 | 8.788086e-53 | -8.615850e-47 |
Msa0648520 | Msa1379850 | 0.866307 | 3.136714e-65 | -8.615850e-47 |
Msa0648520 | Msa1390120 | 0.856126 | 3.972674e-62 | -8.615850e-47 |
Msa0648520 | Msa1393410 | 0.815070 | 1.115920e-51 | -8.615850e-47 |
Msa0648520 | Msa1395530 | 0.864892 | 8.766485e-65 | -8.615850e-47 |
Msa0648520 | Msa1396780 | 0.800734 | 1.254370e-48 | -8.615850e-47 |
Msa0648520 | Msa1401270 | 0.814590 | 1.425605e-51 | -8.615850e-47 |
Msa0648520 | Msa1402270 | 0.806080 | 9.783822e-50 | -8.615850e-47 |
Msa0648520 | Msa1404540 | 0.822608 | 2.162778e-53 | -8.615850e-47 |
Msa0648520 | Msa1408620 | -0.840738 | 7.257229e-58 | -8.615850e-47 |
Msa0648520 | Msa1415940 | 0.817478 | 3.229478e-52 | -8.615850e-47 |
Msa0648520 | Msa1420250 | 0.801892 | 7.264471e-49 | -8.615850e-47 |
Msa0648520 | Msa1422840 | 0.800503 | 1.397902e-48 | -8.615850e-47 |
Msa0648520 | Msa1431060 | 0.820156 | 7.960501e-53 | -8.615850e-47 |
Msa0648520 | Msa1433220 | 0.842135 | 3.111439e-58 | -8.615850e-47 |
Msa0648520 | Msa1435400 | 0.826912 | 2.091201e-54 | -8.615850e-47 |
Msa0648520 | Msa1435420 | 0.813529 | 2.443747e-51 | -8.615850e-47 |
Msa0648520 | Msa1440740 | 0.801154 | 1.029166e-48 | -8.615850e-47 |
Msa0648520 | Msa1447110 | 0.827349 | 1.643302e-54 | -8.615850e-47 |
Msa0648520 | Msa1449910 | 0.833461 | 5.263682e-56 | -8.615850e-47 |
Msa0648520 | Msa1459050 | 0.804245 | 2.369554e-49 | -8.615850e-47 |
Msa0648520 | Msa1459180 | 0.833927 | 4.024457e-56 | -8.615850e-47 |
Msa0648520 | Msa1459390 | 0.801228 | 9.942536e-49 | -8.615850e-47 |
Msa0648520 | Msa1460020 | 0.807380 | 5.200028e-50 | -8.615850e-47 |
Msa0123100 | Msa0648520 | 0.830846 | 2.333079e-55 | -8.615850e-47 |
Msa0125770 | Msa0648520 | 0.818699 | 1.710092e-52 | -8.615850e-47 |
Msa0133720 | Msa0648520 | 0.821813 | 3.306302e-53 | -8.615850e-47 |
Msa0133820 | Msa0648520 | 0.830593 | 2.690703e-55 | -8.615850e-47 |
Msa0133980 | Msa0648520 | -0.811958 | 5.395510e-51 | -8.615850e-47 |
Msa0138970 | Msa0648520 | -0.812285 | 4.577421e-51 | -8.615850e-47 |
Msa0142460 | Msa0648520 | 0.825027 | 5.862884e-54 | -8.615850e-47 |
Msa0142470 | Msa0648520 | 0.806208 | 9.196395e-50 | -8.615850e-47 |
Msa0145070 | Msa0648520 | 0.834873 | 2.330442e-56 | -8.615850e-47 |
Msa0145110 | Msa0648520 | 0.819342 | 1.221263e-52 | -8.615850e-47 |
Msa0145980 | Msa0648520 | -0.847895 | 8.654661e-60 | -8.615850e-47 |
Msa0154440 | Msa0648520 | 0.823030 | 1.724879e-53 | -8.615850e-47 |
Msa0160010 | Msa0648520 | 0.832550 | 8.867022e-56 | -8.615850e-47 |
Msa0161530 | Msa0648520 | 0.837750 | 4.324445e-57 | -8.615850e-47 |
Msa0165300 | Msa0648520 | 0.851214 | 1.026708e-60 | -8.615850e-47 |
Msa0170140 | Msa0648520 | 0.822186 | 2.710223e-53 | -8.615850e-47 |
Msa0181230 | Msa0648520 | 0.846437 | 2.172704e-59 | -8.615850e-47 |
Msa0187030 | Msa0648520 | 0.843795 | 1.125006e-58 | -8.615850e-47 |
Msa0189950 | Msa0648520 | 0.813487 | 2.496573e-51 | -8.615850e-47 |
Msa0191250 | Msa0648520 | 0.812613 | 3.882852e-51 | -8.615850e-47 |
Msa0191890 | Msa0648520 | 0.816707 | 4.812378e-52 | -8.615850e-47 |
Msa0193540 | Msa0648520 | 0.803773 | 2.970763e-49 | -8.615850e-47 |
Msa0193650 | Msa0648520 | 0.802590 | 5.219549e-49 | -8.615850e-47 |
Msa0196020 | Msa0648520 | -0.816359 | 5.760986e-52 | -8.615850e-47 |
Msa0196340 | Msa0648520 | 0.839693 | 1.360025e-57 | -8.615850e-47 |
Msa0198520 | Msa0648520 | 0.804239 | 2.376466e-49 | -8.615850e-47 |
Msa0200560 | Msa0648520 | 0.806634 | 7.477526e-50 | -8.615850e-47 |
Msa0217400 | Msa0648520 | 0.803234 | 3.842008e-49 | -8.615850e-47 |
Msa0220290 | Msa0648520 | -0.841994 | 3.390543e-58 | -8.615850e-47 |
Msa0222920 | Msa0648520 | 0.836114 | 1.130889e-56 | -8.615850e-47 |
Msa0223410 | Msa0648520 | -0.803332 | 3.666753e-49 | -8.615850e-47 |
Msa0230370 | Msa0648520 | 0.821577 | 3.749044e-53 | -8.615850e-47 |
Msa0238230 | Msa0648520 | 0.847995 | 8.122115e-60 | -8.615850e-47 |
Msa0365490 | Msa0648520 | 0.800464 | 1.423410e-48 | -8.615850e-47 |
Msa0376590 | Msa0648520 | 0.822373 | 2.452156e-53 | -8.615850e-47 |
Msa0388030 | Msa0648520 | -0.813804 | 2.125885e-51 | -8.615850e-47 |
Msa0392200 | Msa0648520 | 0.812178 | 4.830392e-51 | -8.615850e-47 |
Msa0394410 | Msa0648520 | -0.801060 | 1.075973e-48 | -8.615850e-47 |
Msa0405880 | Msa0648520 | 0.803078 | 4.139376e-49 | -8.615850e-47 |
Msa0414950 | Msa0648520 | -0.808348 | 3.236350e-50 | -8.615850e-47 |
Msa0422500 | Msa0648520 | 0.805517 | 1.284809e-49 | -8.615850e-47 |
Msa0436370 | Msa0648520 | 0.865904 | 4.208105e-65 | -8.615850e-47 |
Msa0437510 | Msa0648520 | 0.821756 | 3.408974e-53 | -8.615850e-47 |
Msa0445280 | Msa0648520 | 0.807653 | 4.549451e-50 | -8.615850e-47 |
Msa0448550 | Msa0648520 | -0.865836 | 4.421607e-65 | -8.615850e-47 |
Msa0450350 | Msa0648520 | 0.815035 | 1.136215e-51 | -8.615850e-47 |
Msa0452810 | Msa0648520 | -0.804288 | 2.321399e-49 | -8.615850e-47 |
Msa0458440 | Msa0648520 | 0.808181 | 3.514144e-50 | -8.615850e-47 |
Msa0462220 | Msa0648520 | 0.815485 | 9.025720e-52 | -8.615850e-47 |
Msa0468800 | Msa0648520 | 0.826762 | 2.270913e-54 | -8.615850e-47 |
Msa0480800 | Msa0648520 | 0.809793 | 1.587378e-50 | -8.615850e-47 |
Msa0239510 | Msa0648520 | 0.810506 | 1.114258e-50 | -8.615850e-47 |
Msa0251050 | Msa0648520 | 0.812553 | 4.002112e-51 | -8.615850e-47 |
Msa0260810 | Msa0648520 | 0.809629 | 1.721383e-50 | -8.615850e-47 |
Msa0264780 | Msa0648520 | 0.814521 | 1.476823e-51 | -8.615850e-47 |
Msa0266000 | Msa0648520 | -0.808450 | 3.078181e-50 | -8.615850e-47 |
Msa0276920 | Msa0648520 | 0.812068 | 5.106607e-51 | -8.615850e-47 |
Msa0277420 | Msa0648520 | 0.828578 | 8.317538e-55 | -8.615850e-47 |
Msa0282850 | Msa0648520 | 0.800904 | 1.157764e-48 | -8.615850e-47 |
Msa0287310 | Msa0648520 | 0.805570 | 1.252397e-49 | -8.615850e-47 |
Msa0312530 | Msa0648520 | 0.824472 | 7.925789e-54 | -8.615850e-47 |
Msa0315240 | Msa0648520 | 0.804709 | 1.896221e-49 | -8.615850e-47 |
Msa0317270 | Msa0648520 | 0.812689 | 3.737121e-51 | -8.615850e-47 |
Msa0317390 | Msa0648520 | 0.808124 | 3.612948e-50 | -8.615850e-47 |
Msa0317730 | Msa0648520 | 0.842800 | 2.072937e-58 | -8.615850e-47 |
Msa0317740 | Msa0648520 | 0.843902 | 1.053138e-58 | -8.615850e-47 |
Msa0333720 | Msa0648520 | -0.805685 | 1.184915e-49 | -8.615850e-47 |
Msa0334350 | Msa0648520 | 0.820451 | 6.813186e-53 | -8.615850e-47 |
Msa0335040 | Msa0648520 | 0.841196 | 5.502542e-58 | -8.615850e-47 |
Msa0343420 | Msa0648520 | 0.817185 | 3.759033e-52 | -8.615850e-47 |
Msa0356890 | Msa0648520 | -0.874420 | 6.851633e-68 | -8.615850e-47 |
Msa0484780 | Msa0648520 | 0.801327 | 9.488260e-49 | -8.615850e-47 |
Msa0487780 | Msa0648520 | 0.803316 | 3.695049e-49 | -8.615850e-47 |
Msa0498450 | Msa0648520 | 0.802306 | 5.971167e-49 | -8.615850e-47 |
Msa0516370 | Msa0648520 | 0.828966 | 6.700996e-55 | -8.615850e-47 |
Msa0517490 | Msa0648520 | 0.806288 | 8.848789e-50 | -8.615850e-47 |
Msa0522640 | Msa0648520 | 0.833499 | 5.150724e-56 | -8.615850e-47 |
Msa0532550 | Msa0648520 | 0.823304 | 1.488265e-53 | -8.615850e-47 |
Msa0542160 | Msa0648520 | 0.801362 | 9.331505e-49 | -8.615850e-47 |
Msa0556010 | Msa0648520 | 0.804409 | 2.190589e-49 | -8.615850e-47 |
Msa0559500 | Msa0648520 | 0.808464 | 3.057862e-50 | -8.615850e-47 |
Msa0567020 | Msa0648520 | 0.824640 | 7.236303e-54 | -8.615850e-47 |
Msa0572420 | Msa0648520 | 0.812589 | 3.929186e-51 | -8.615850e-47 |
Msa0572480 | Msa0648520 | 0.857374 | 1.704856e-62 | -8.615850e-47 |
Msa0574760 | Msa0648520 | -0.809920 | 1.490429e-50 | -8.615850e-47 |
Msa0574890 | Msa0648520 | 0.805749 | 1.148889e-49 | -8.615850e-47 |
Msa0576890 | Msa0648520 | 0.852591 | 4.174616e-61 | -8.615850e-47 |
Msa0578090 | Msa0648520 | 0.803113 | 4.069918e-49 | -8.615850e-47 |
Msa0579660 | Msa0648520 | 0.806101 | 9.688749e-50 | -8.615850e-47 |
Msa0581050 | Msa0648520 | 0.833284 | 5.825865e-56 | -8.615850e-47 |
Msa0581690 | Msa0648520 | 0.800649 | 1.305090e-48 | -8.615850e-47 |
Msa0585920 | Msa0648520 | 0.811350 | 7.317427e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0648520 | MtrunA17_Chr4g0039981 | 97.319 | 858 | 23 | 0 | 1 | 858 | 1 | 858 | 0.0 | 1629 |
Msa0648520 | MtrunA17_Chr5g0395261 | 65.498 | 884 | 250 | 14 | 2 | 856 | 26 | 883 | 0.0 | 987 |
Msa0648520 | MtrunA17_Chr3g0123761 | 30.682 | 352 | 217 | 5 | 312 | 663 | 83 | 407 | 8.87e-23 | 103 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0648520 | AT5G16730.1 | 52.558 | 860 | 357 | 19 | 20 | 858 | 24 | 853 | 0.0 | 635 |
Msa0648520 | AT3G02930.1 | 51.336 | 861 | 361 | 15 | 1 | 858 | 1 | 806 | 0.0 | 596 |
Msa0648520 | AT3G02930.2 | 51.285 | 856 | 361 | 14 | 6 | 858 | 2 | 804 | 0.0 | 596 |
Msa0648520 | AT3G02930.3 | 51.336 | 861 | 361 | 15 | 1 | 858 | 1 | 806 | 0.0 | 596 |
Msa0648520 | AT1G65010.1 | 53.120 | 625 | 290 | 2 | 33 | 656 | 30 | 652 | 6.17e-175 | 541 |
Msa0648520 | AT4G27595.1 | 49.073 | 701 | 329 | 9 | 1 | 690 | 1 | 684 | 7.80e-170 | 525 |
Msa0648520 | AT4G27595.2 | 49.275 | 690 | 328 | 8 | 6 | 690 | 3 | 675 | 7.67e-169 | 522 |
Msa0648520 | AT4G40020.1 | 30.469 | 256 | 167 | 2 | 404 | 659 | 123 | 367 | 1.21e-13 | 75.1 |
Msa0648520 | AT2G37080.1 | 32.461 | 191 | 97 | 7 | 17 | 206 | 17 | 176 | 1.13e-12 | 72.0 |
Msa0648520 | AT2G37080.2 | 32.461 | 191 | 97 | 7 | 17 | 206 | 17 | 176 | 1.13e-12 | 72.0 |
Msa0648520 | AT2G37080.3 | 31.579 | 190 | 98 | 6 | 17 | 206 | 17 | 174 | 1.67e-12 | 71.6 |
Find 178 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGAATGTTGTTTCTATTTC+TGG | 0.107855 | 4_3:+54985353 | None:intergenic |
AAATTTGATATTTAAATATT+AGG | 0.111752 | 4_3:+54985063 | None:intergenic |
AAAGCTTTGCTTGGAAAATT+TGG | 0.148163 | 4_3:-54985406 | Msa0648520:CDS |
TTCATGCTCAGTGTGATTTC+TGG | 0.166546 | 4_3:+54985936 | None:intergenic |
GAAAATTGGTTTGAAATTAT+TGG | 0.182744 | 4_3:+54989702 | None:intergenic |
CTGCTTTCAACTTCAATATA+AGG | 0.227623 | 4_3:+54987144 | None:intergenic |
TCAGAAAATTCAACGACTTT+AGG | 0.228754 | 4_3:+54985871 | None:intergenic |
AATTTGATATTTAAATATTA+GGG | 0.236212 | 4_3:+54985064 | None:intergenic |
GATTTGAAGTTAGTCTTAAA+AGG | 0.240438 | 4_3:-54986432 | Msa0648520:CDS |
TTGCTAACTTTACTTACTTT+TGG | 0.242464 | 4_3:+54988888 | None:intergenic |
GTAGTAAGTTAGAAGAAAAT+TGG | 0.262393 | 4_3:+54989688 | None:intergenic |
TCAATGAATTGGAGAATTCT+AGG | 0.267794 | 4_3:-54986593 | Msa0648520:CDS |
GAGAAACACAACAACAATTT+AGG | 0.280321 | 4_3:+54989659 | None:intergenic |
GAGAGCTTTGATAAGATAAA+TGG | 0.293654 | 4_3:-54985511 | Msa0648520:CDS |
CTGAAAGCCCTCATTTGAAT+TGG | 0.300931 | 4_3:+54985088 | None:intergenic |
GAGTTGCACGATTGAGAAAA+AGG | 0.311057 | 4_3:-54985623 | Msa0648520:CDS |
CCTTCTCCTTCTCAGCTTGA+AGG | 0.311769 | 4_3:+54987603 | None:intergenic |
ATGGGCTTGTAATATTGTTT+AGG | 0.313252 | 4_3:-54985227 | Msa0648520:three_prime_UTR |
TTCAGAACGCCGTCTTCTTA+TGG | 0.322768 | 4_3:-54986766 | Msa0648520:CDS |
TCTTTGCTCTCATCTTCCTT+TGG | 0.336435 | 4_3:+54985685 | None:intergenic |
GAAGAGAATGGTCATGGATA+TGG | 0.341434 | 4_3:-54985850 | Msa0648520:CDS |
GTTGCTTAGAAAATTCTCTT+TGG | 0.347577 | 4_3:+54986491 | None:intergenic |
TCTGAACCCTTTGCAGCTCT+TGG | 0.352340 | 4_3:+54987683 | None:intergenic |
GAAAGATAATGTGGCCTGTC+TGG | 0.352818 | 4_3:-54989790 | Msa0648520:five_prime_UTR |
AAACAAACTCATCAATGAAT+TGG | 0.355092 | 4_3:-54986604 | Msa0648520:CDS |
AATCACACTGAGCATGAAAA+TGG | 0.356757 | 4_3:-54985931 | Msa0648520:CDS |
CTGAGCTTCTTCGTCCCTAT+TGG | 0.359876 | 4_3:+54986176 | None:intergenic |
GGAGGAGTTGTCAAAGTTAC+TGG | 0.363861 | 4_3:-54985971 | Msa0648520:CDS |
AAAATTCCGAGCTGTTGAAT+TGG | 0.372773 | 4_3:-54987468 | Msa0648520:CDS |
TGGCGACTCAGATGCTGATT+TGG | 0.373526 | 4_3:+54988857 | None:intergenic |
CTCCACCTTCTTAATAGATT+CGG | 0.374470 | 4_3:+54985990 | None:intergenic |
TTGCTACCAACATGATGATA+TGG | 0.381455 | 4_3:+54985178 | None:intergenic |
TACTTGTTACCTTGCTTCCA+TGG | 0.387341 | 4_3:-54989578 | Msa0648520:exon |
AGGGAAAGCTCAACAACCTT+TGG | 0.390841 | 4_3:+54985814 | None:intergenic |
TTCCTTAACTGCCTCAAGTT+CGG | 0.393340 | 4_3:+54986695 | None:intergenic |
TTTGAGTTCTTCCTGATTGA+GGG | 0.393979 | 4_3:+54985795 | None:intergenic |
TTTGAGCCACCAATGCTGCC+TGG | 0.397662 | 4_3:+54987519 | None:intergenic |
CAATATAAGGTTATTATCAC+TGG | 0.402454 | 4_3:+54987157 | None:intergenic |
AGGAAGAATCAAATGCCAAT+AGG | 0.404807 | 4_3:-54986191 | Msa0648520:CDS |
GAAACTGAAGGAGAATATAT+TGG | 0.409904 | 4_3:-54986073 | Msa0648520:CDS |
TGTTGCCGGTGGTGCTTTGT+TGG | 0.413551 | 4_3:+54988911 | None:intergenic |
GCTGATTTCCGCTCAACAGC+TGG | 0.414676 | 4_3:+54988774 | None:intergenic |
GCATGAAAATGGTGATCTTT+CGG | 0.415307 | 4_3:-54985920 | Msa0648520:CDS |
GCCTCTGGAAGTTCTCTCTC+TGG | 0.419412 | 4_3:+54985586 | None:intergenic |
ATCCGAACTTGAGGCAGTTA+AGG | 0.419625 | 4_3:-54986697 | Msa0648520:CDS |
TCTTCCAATGATTTAGCCTC+TGG | 0.426077 | 4_3:+54985571 | None:intergenic |
CTAACTTCAAATCTTCAATC+TGG | 0.431089 | 4_3:+54986442 | None:intergenic |
CCGAGCTGTTGAATTGGAAC+AGG | 0.431367 | 4_3:-54987462 | Msa0648520:CDS |
CATAGCTTTCCCTTTCAGCT+TGG | 0.431387 | 4_3:+54986469 | None:intergenic |
TGTTGAGCTTTCCCTCAATC+AGG | 0.432554 | 4_3:-54985806 | Msa0648520:CDS |
CCATCTGCAGGAAGCTCTAA+AGG | 0.434538 | 4_3:-54986115 | Msa0648520:CDS |
TCAGATGCTGATTTGGTCAC+TGG | 0.435750 | 4_3:+54988864 | None:intergenic |
GTTATAGAGAACATTGATAA+TGG | 0.439389 | 4_3:-54985481 | Msa0648520:CDS |
GAGCTTCTCATTTGCTTCCT+CGG | 0.442024 | 4_3:+54987541 | None:intergenic |
TGAAAGCCCTCATTTGAATT+GGG | 0.443283 | 4_3:+54985089 | None:intergenic |
GTTTGAGTTCTTCCTGATTG+AGG | 0.445779 | 4_3:+54985794 | None:intergenic |
CCTAAACCTGTGAAAATGAA+TGG | 0.446361 | 4_3:-54985712 | Msa0648520:CDS |
TTCATGTGGTTGTTCCAGAC+AGG | 0.448414 | 4_3:+54989776 | None:intergenic |
ACTTCCAGAGGCTAAATCAT+TGG | 0.450557 | 4_3:-54985575 | Msa0648520:CDS |
TGACATAAACAAGGAACAAA+TGG | 0.457908 | 4_3:+54985113 | None:intergenic |
GAGATCTGCATCAGAATCCT+TGG | 0.462775 | 4_3:-54986919 | Msa0648520:CDS |
CTCAAGCTCCTCAGTGGTTG+AGG | 0.472269 | 4_3:+54987346 | None:intergenic |
TCTAAGCAACCAAGCTGAAA+GGG | 0.473285 | 4_3:-54986478 | Msa0648520:CDS |
GGAAGCTTGCTCAAGAAGAA+AGG | 0.475338 | 4_3:-54985385 | Msa0648520:CDS |
AGCTGAATTGACACAGTTGA+AGG | 0.478624 | 4_3:-54987210 | Msa0648520:CDS |
CCTTTAGAGCTTCCTGCAGA+TGG | 0.481010 | 4_3:+54986115 | None:intergenic |
GGCTCAAAAGCAGGCTAAAG+AGG | 0.482156 | 4_3:-54987504 | Msa0648520:CDS |
AAGAAGAAGAAAGCTTTGCT+TGG | 0.483792 | 4_3:-54985415 | Msa0648520:CDS |
AGGAAGATGAGAGCAAAGAA+AGG | 0.487813 | 4_3:-54985681 | Msa0648520:CDS |
GGAAGAATCAAATGCCAATA+GGG | 0.488686 | 4_3:-54986190 | Msa0648520:CDS |
CATCAGCATGATTTAATGCC+TGG | 0.490454 | 4_3:+54987282 | None:intergenic |
TGGCTTCAAAATCTAGTACT+AGG | 0.491809 | 4_3:-54989558 | Msa0648520:intron |
ATCAATGTTCTCTATAACAG+TGG | 0.492151 | 4_3:+54985486 | None:intergenic |
AGCATTGGTGGCTCAAAAGC+AGG | 0.492354 | 4_3:-54987513 | Msa0648520:CDS |
AAAACGATGAACTCCGAGCT+AGG | 0.492776 | 4_3:-54986017 | Msa0648520:CDS |
CTGCTTCATTACAGATTCCA+AGG | 0.493723 | 4_3:+54986902 | None:intergenic |
TTGAAATTATTGGAAGGAGA+AGG | 0.495882 | 4_3:+54989712 | None:intergenic |
AGAAGCACAAAGAGTGGCCG+AGG | 0.498602 | 4_3:-54987558 | Msa0648520:CDS |
GAAGCTCCAGGCAGCATTGG+TGG | 0.499796 | 4_3:-54987525 | Msa0648520:CDS |
ACAAGCTCCAAGAGCTGCAA+AGG | 0.501010 | 4_3:-54987690 | Msa0648520:CDS |
AGTTAAGGAACTAGAAATGA+GGG | 0.504114 | 4_3:-54986964 | Msa0648520:CDS |
TTCTAAGCAACCAAGCTGAA+AGG | 0.505989 | 4_3:-54986479 | Msa0648520:CDS |
ATGTCATCCCAATTCAAATG+AGG | 0.512668 | 4_3:-54985096 | Msa0648520:three_prime_UTR |
TGAGAAGCTCCAGGCAGCAT+TGG | 0.514376 | 4_3:-54987528 | Msa0648520:CDS |
CTATTATTGCTTACATCAGG+TGG | 0.516293 | 4_3:+54988735 | None:intergenic |
GAGAATGGTCATGGATATGG+AGG | 0.517496 | 4_3:-54985847 | Msa0648520:CDS |
GCAAAATTCACGTCTTTCTG+TGG | 0.518226 | 4_3:-54988826 | Msa0648520:CDS |
TAGATTCGGCTTCCCTAGCT+CGG | 0.520735 | 4_3:+54986004 | None:intergenic |
TGGTGCTTTGTTGGAACTGT+CGG | 0.523110 | 4_3:+54988920 | None:intergenic |
TGAAGAAGAGAATGCGGCCG+CGG | 0.524949 | 4_3:-54986256 | Msa0648520:CDS |
TTCTTGTGTTGAATCTAGCA+AGG | 0.527152 | 4_3:+54987187 | None:intergenic |
TGTCATCCCAATTCAAATGA+GGG | 0.527827 | 4_3:-54985095 | Msa0648520:three_prime_UTR |
GGTTGAAGAATCAAACAAGT+TGG | 0.530427 | 4_3:-54986943 | Msa0648520:CDS |
GACCGAGGCTATCCATCTGC+AGG | 0.531409 | 4_3:-54986127 | Msa0648520:CDS |
GCAGATCCTTCAAGCTGAGA+AGG | 0.531854 | 4_3:-54987609 | Msa0648520:CDS |
GGAAGCAAATGAGAAGCTCC+AGG | 0.537000 | 4_3:-54987537 | Msa0648520:CDS |
AACCACTGAGGAGCTTGAGC+GGG | 0.538320 | 4_3:-54987342 | Msa0648520:CDS |
AAGTTAAGGAACTAGAAATG+AGG | 0.538694 | 4_3:-54986965 | Msa0648520:CDS |
CTCAGTGGTTGAGGCAAGAG+TGG | 0.539143 | 4_3:+54987355 | None:intergenic |
GGACGAAGAAGCTCAGTTGA+AGG | 0.541111 | 4_3:-54986169 | Msa0648520:CDS |
TGAATAAGAAGGAAGAAGAA+TGG | 0.541280 | 4_3:-54987424 | Msa0648520:CDS |
AGAGGCTAAATCATTGGAAG+AGG | 0.542206 | 4_3:-54985569 | Msa0648520:CDS |
AGTTAAGGAAGAGAAAGATC+AGG | 0.542809 | 4_3:-54986682 | Msa0648520:CDS |
TGCTACTCTTAAAGAGAAGG+TGG | 0.543694 | 4_3:-54986835 | Msa0648520:CDS |
TGATCTTTCGGACAGCGAAA+AGG | 0.544136 | 4_3:-54985908 | Msa0648520:CDS |
ACGCCGTCTTCTTATGGCTA+AGG | 0.545598 | 4_3:-54986760 | Msa0648520:CDS |
CAGTTCCAACAAAGCACCAC+CGG | 0.546168 | 4_3:-54988916 | Msa0648520:CDS |
GCTGTTGAATTGGAACAGGC+TGG | 0.548085 | 4_3:-54987458 | Msa0648520:CDS |
TGGCCACATCCAAGGCATGC+TGG | 0.548388 | 4_3:+54987375 | None:intergenic |
GGCTTTGAATTCACAGATCG+TGG | 0.550956 | 4_3:+54988795 | None:intergenic |
ATTGGTTTGAAATTATTGGA+AGG | 0.551236 | 4_3:+54989706 | None:intergenic |
TGTGAGGAACCAGCATGCCT+TGG | 0.551371 | 4_3:-54987384 | Msa0648520:CDS |
CAATGAATTGGAGAATTCTA+GGG | 0.553198 | 4_3:-54986592 | Msa0648520:CDS |
TATTATTGCTTACATCAGGT+GGG | 0.554905 | 4_3:+54988736 | None:intergenic |
GGTTCTCCATATCATCATGT+TGG | 0.555729 | 4_3:-54985184 | Msa0648520:three_prime_UTR |
AATTGAAACTGTGAATAAGA+AGG | 0.556477 | 4_3:-54987435 | Msa0648520:CDS |
GGAAGATGAGAGCAAAGAAA+GGG | 0.556487 | 4_3:-54985680 | Msa0648520:CDS |
CAACCACTGAGGAGCTTGAG+CGG | 0.561441 | 4_3:-54987343 | Msa0648520:CDS |
CTTCCTTAGCCATAAGAAGA+CGG | 0.564152 | 4_3:+54986757 | None:intergenic |
ACTGAGTCAAAGACAGAAGA+AGG | 0.566826 | 4_3:-54985544 | Msa0648520:CDS |
TACTTTCTCAGCATGAACCT+CGG | 0.567598 | 4_3:+54987244 | None:intergenic |
TGAAAAGTCAAAGAAGATTG+AGG | 0.568592 | 4_3:-54986727 | Msa0648520:CDS |
TGGTCATGGATATGGAGGAG+AGG | 0.569474 | 4_3:-54985842 | Msa0648520:CDS |
GGAAGCCGAATCTATTAAGA+AGG | 0.570744 | 4_3:-54985995 | Msa0648520:CDS |
GGCAAGAGTGGCCACATCCA+AGG | 0.575724 | 4_3:+54987367 | None:intergenic |
AAGAAGTAGAATTCAAAATG+TGG | 0.576268 | 4_3:-54985648 | Msa0648520:CDS |
AAACGATGAACTCCGAGCTA+GGG | 0.576737 | 4_3:-54986016 | Msa0648520:CDS |
AGAAGTAGAATTCAAAATGT+GGG | 0.576995 | 4_3:-54985647 | Msa0648520:CDS |
TGAGAACTCGAAGGCTGAGT+GGG | 0.577593 | 4_3:-54986319 | Msa0648520:CDS |
GTTCTTAGCATCACACATCA+TGG | 0.582449 | 4_3:+54987304 | None:intergenic |
AGCTGCTACTCTTAAAGAGA+AGG | 0.582698 | 4_3:-54986838 | Msa0648520:CDS |
CATAAACAAGGAACAAATGG+TGG | 0.583214 | 4_3:+54985116 | None:intergenic |
ATTATTGCTTACATCAGGTG+GGG | 0.583904 | 4_3:+54988737 | None:intergenic |
ATAGAGAACATTGATAATGG+TGG | 0.585848 | 4_3:-54985478 | Msa0648520:CDS |
AACGGTTAAGAAAGATAATG+TGG | 0.587116 | 4_3:-54989799 | Msa0648520:five_prime_UTR |
TTATGCAAACAGTCTGCTTG+AGG | 0.587993 | 4_3:-54987000 | Msa0648520:CDS |
GCTTTGTTGGAACTGTCGGA+TGG | 0.588599 | 4_3:+54988924 | None:intergenic |
AGAAGATCTAAAGAAAGCAA+AGG | 0.589350 | 4_3:-54987633 | Msa0648520:CDS |
ATGTAGAACTTGAAACCTCA+AGG | 0.589981 | 4_3:-54987034 | Msa0648520:CDS |
GAACCAGCATGCCTTGGATG+TGG | 0.590468 | 4_3:-54987378 | Msa0648520:CDS |
AAGACAGAAGAAGGTGGTGA+TGG | 0.591342 | 4_3:-54985535 | Msa0648520:CDS |
AGGGAATGAGTTATGATGAG+AGG | 0.592178 | 4_3:-54987091 | Msa0648520:CDS |
GCGTTCTGAATCCTCAAGAT+CGG | 0.596202 | 4_3:+54986779 | None:intergenic |
GGCTCTTGAATCCGAACTTG+AGG | 0.596607 | 4_3:-54986706 | Msa0648520:CDS |
CGAATCTATTAAGAAGGTGG+AGG | 0.596983 | 4_3:-54985989 | Msa0648520:CDS |
TCAGTTGAAGGAAAATCTGA+AGG | 0.598448 | 4_3:-54986157 | Msa0648520:CDS |
CAAGCTCCAAGAGCTGCAAA+GGG | 0.600838 | 4_3:-54987689 | Msa0648520:CDS |
CAAACAGTCTGCTTGAGGAG+TGG | 0.607787 | 4_3:-54986995 | Msa0648520:CDS |
CCTGTTCCAATTCAACAGCT+CGG | 0.607837 | 4_3:+54987462 | None:intergenic |
GTCTGAGAACGTGAAACTGA+AGG | 0.607986 | 4_3:-54986085 | Msa0648520:CDS |
CCTTCAAGCTGAGAAGGAGA+AGG | 0.610724 | 4_3:-54987603 | Msa0648520:CDS |
AGCCGAATCTATTAAGAAGG+TGG | 0.611971 | 4_3:-54985992 | Msa0648520:CDS |
ATTGCTTACATCAGGTGGGG+TGG | 0.612190 | 4_3:+54988740 | None:intergenic |
GAAAATGAATGGAAAACCAA+AGG | 0.613917 | 4_3:-54985701 | Msa0648520:CDS |
GAATGTGTTTGAGAACTCGA+AGG | 0.623748 | 4_3:-54986328 | Msa0648520:CDS |
TAATAGGGTCTGCACATGAG+AGG | 0.625836 | 4_3:+54986635 | None:intergenic |
AACCCGCTCAAGCTCCTCAG+TGG | 0.633744 | 4_3:+54987340 | None:intergenic |
CTCAAGAAAGAACTCGACAA+GGG | 0.633999 | 4_3:-54987110 | Msa0648520:CDS |
TCTCAAGAAAGAACTCGACA+AGG | 0.634380 | 4_3:-54987111 | Msa0648520:CDS |
TTCCTGCAGATGGATAGCCT+CGG | 0.644406 | 4_3:+54986125 | None:intergenic |
ATAAGATTCAGCCGTCCTTG+AGG | 0.647778 | 4_3:+54987019 | None:intergenic |
TTATTTGCTTAAACAAACTG+AGG | 0.648313 | 4_3:-54986211 | Msa0648520:CDS |
TTGAGAACTCGAAGGCTGAG+TGG | 0.651278 | 4_3:-54986320 | Msa0648520:CDS |
GTTGAAAGAAGCACAAAGAG+TGG | 0.652851 | 4_3:-54987564 | Msa0648520:CDS |
TGGAGGAGAGGAAATTCCAA+AGG | 0.653330 | 4_3:-54985830 | Msa0648520:CDS |
GAATTGGGATGACATAAACA+AGG | 0.659304 | 4_3:+54985104 | None:intergenic |
ATTCAAAGCCAGCTGTTGAG+CGG | 0.660562 | 4_3:-54988782 | Msa0648520:CDS |
GCTACTCTTAAAGAGAAGGT+GGG | 0.661481 | 4_3:-54986834 | Msa0648520:CDS |
AGCTTGCTCAAGAAGAAAGG+TGG | 0.662119 | 4_3:-54985382 | Msa0648520:CDS |
GAAAACTGAAGAAGAGAATG+CGG | 0.663328 | 4_3:-54986262 | Msa0648520:CDS |
AGTCAATGCTTGATGAAGCG+CGG | 0.666394 | 4_3:-54986392 | Msa0648520:CDS |
TGATGCAGCTAAAGTTGCCG+AGG | 0.669959 | 4_3:-54987261 | Msa0648520:CDS |
AGAACTTGAAACCTCAAGGA+CGG | 0.671436 | 4_3:-54987030 | Msa0648520:CDS |
TCTGAAGGAAGTTGAGACCG+AGG | 0.687621 | 4_3:-54986142 | Msa0648520:CDS |
CACTCTTGCCTCAACCACTG+AGG | 0.695834 | 4_3:-54987354 | Msa0648520:CDS |
ACCAGAGAGAGAACTTCCAG+AGG | 0.698874 | 4_3:-54985587 | Msa0648520:CDS |
GATGTGTGATGCTAAGAACC+AGG | 0.701568 | 4_3:-54987300 | Msa0648520:CDS |
GAGTCAAAGACAGAAGAAGG+TGG | 0.711580 | 4_3:-54985541 | Msa0648520:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTACTTTTTGT+CGG | - | chr4_3:54985510-54985529 | Msa0648520:CDS | 10.0% |
!!! | AATATAGATTTTATAAGAAA+TGG | - | chr4_3:54989693-54989712 | Msa0648520:five_prime_UTR | 10.0% |
!!! | ATATAGATTTTATAAGAAAT+GGG | - | chr4_3:54989694-54989713 | Msa0648520:five_prime_UTR | 10.0% |
!!! | TTTTTTTGTTGAATTATGAA+TGG | + | chr4_3:54985333-54985352 | None:intergenic | 15.0% |
!! | AAAAATAGTAATTGAAATGA+AGG | + | chr4_3:54986310-54986329 | None:intergenic | 15.0% |
!!! | TTCATTTCAATTACTATTTT+TGG | - | chr4_3:54986309-54986328 | Msa0648520:CDS | 15.0% |
!!! | TCATTTCAATTACTATTTTT+GGG | - | chr4_3:54986310-54986329 | Msa0648520:CDS | 15.0% |
!!! | TAATAATTTGACATTTTTGT+GGG | - | chr4_3:54986431-54986450 | Msa0648520:CDS | 15.0% |
!!! | AATATTGTTTAGGATTTTTT+TGG | - | chr4_3:54989722-54989741 | Msa0648520:five_prime_UTR | 15.0% |
!!! | GAAAATTGGTTTGAAATTAT+TGG | + | chr4_3:54985240-54985259 | None:intergenic | 20.0% |
!! | TCTATGTACAATTCAAAAAT+TGG | - | chr4_3:54985684-54985703 | Msa0648520:CDS | 20.0% |
!! | CTATGTACAATTCAAAAATT+GGG | - | chr4_3:54985685-54985704 | Msa0648520:CDS | 20.0% |
!! | CAACAATGTATTGTAAAATA+AGG | + | chr4_3:54985783-54985802 | None:intergenic | 20.0% |
!!! | AAATAAGAATTGTTTTCTTG+TGG | - | chr4_3:54985867-54985886 | Msa0648520:CDS | 20.0% |
!!! | CTAATAATTTGACATTTTTG+TGG | - | chr4_3:54986430-54986449 | Msa0648520:CDS | 20.0% |
!!! | AATAATTTGACATTTTTGTG+GGG | - | chr4_3:54986432-54986451 | Msa0648520:CDS | 20.0% |
!! | ATTCTGTAATGTCTATTATT+TGG | - | chr4_3:54986494-54986513 | Msa0648520:CDS | 20.0% |
!! | GTAAAATACTGTTAAACATA+AGG | + | chr4_3:54986554-54986573 | None:intergenic | 20.0% |
!! | ATTATTGATATTATGAAGCA+CGG | - | chr4_3:54986802-54986821 | Msa0648520:CDS | 20.0% |
!!! | TTTGTTTTTCTCTTCTAATA+GGG | + | chr4_3:54988322-54988341 | None:intergenic | 20.0% |
!! | GGAAAAAGAAATAAATAGAT+TGG | - | chr4_3:54988704-54988723 | Msa0648520:intron | 20.0% |
!!! | ATTGGTTTGAAATTATTGGA+AGG | + | chr4_3:54985236-54985255 | None:intergenic | 25.0% |
! | GTAGTAAGTTAGAAGAAAAT+TGG | + | chr4_3:54985254-54985273 | None:intergenic | 25.0% |
!! | TTTTGTTGAATTATGAATGG+TGG | + | chr4_3:54985330-54985349 | None:intergenic | 25.0% |
! | TATACTGTTAAGATCTGAAT+TGG | - | chr4_3:54985440-54985459 | Msa0648520:CDS | 25.0% |
! | ATACTGTTAAGATCTGAATT+GGG | - | chr4_3:54985441-54985460 | Msa0648520:CDS | 25.0% |
!!! | GTAATTTGTTTTTTTGCTTG+AGG | - | chr4_3:54985534-54985553 | Msa0648520:CDS | 25.0% |
! | CTAGTAATTATGATATGCTA+TGG | - | chr4_3:54985566-54985585 | Msa0648520:CDS | 25.0% |
!! | ATGTTCATCTGTTGAAATTT+TGG | - | chr4_3:54985639-54985658 | Msa0648520:CDS | 25.0% |
!! | TGATTTTGTACAATTAAGCT+TGG | - | chr4_3:54985753-54985772 | Msa0648520:CDS | 25.0% |
! | TCAATTTCCAATCAAATAGA+TGG | + | chr4_3:54985900-54985919 | None:intergenic | 25.0% |
!!! | TTGTGTTTTGTTATCTTGAA+TGG | - | chr4_3:54985929-54985948 | Msa0648520:CDS | 25.0% |
!! | TTGCTAACTTTACTTACTTT+TGG | + | chr4_3:54986054-54986073 | None:intergenic | 25.0% |
! | AATCTATTATTGCTTACATC+AGG | + | chr4_3:54986210-54986229 | None:intergenic | 25.0% |
! | AATAGACATTACAGAATGAA+AGG | + | chr4_3:54986491-54986510 | None:intergenic | 25.0% |
! | TGTAATGTCTATTATTTGGT+TGG | - | chr4_3:54986498-54986517 | Msa0648520:CDS | 25.0% |
! | TAAGTAAAAACAAGTGACAT+GGG | + | chr4_3:54987031-54987050 | None:intergenic | 25.0% |
! | TTAAGTAAAAACAAGTGACA+TGG | + | chr4_3:54987032-54987051 | None:intergenic | 25.0% |
! | TGTACTTATTATGTATTGCT+TGG | - | chr4_3:54987214-54987233 | Msa0648520:CDS | 25.0% |
! | AATTGAAACTGTGAATAAGA+AGG | - | chr4_3:54987504-54987523 | Msa0648520:CDS | 25.0% |
! | CAATATAAGGTTATTATCAC+TGG | + | chr4_3:54987785-54987804 | None:intergenic | 25.0% |
!!! | GTTTGTTTTTCTCTTCTAAT+AGG | + | chr4_3:54988323-54988342 | None:intergenic | 25.0% |
! | AAACAAACTCATCAATGAAT+TGG | - | chr4_3:54988335-54988354 | Msa0648520:intron | 25.0% |
! | AGAAGAAGAAAAAAGCAAAA+AGG | - | chr4_3:54988371-54988390 | Msa0648520:intron | 25.0% |
!!! | GATTTGAAGTTAGTCTTAAA+AGG | - | chr4_3:54988507-54988526 | Msa0648520:intron | 25.0% |
!!! | TCTATTTATTTCTTTTTCCG+CGG | + | chr4_3:54988703-54988722 | None:intergenic | 25.0% |
! | TTATTTGCTTAAACAAACTG+AGG | - | chr4_3:54988728-54988747 | Msa0648520:intron | 25.0% |
!! | ATTTTGAATTCTACTTCTTC+TGG | + | chr4_3:54989290-54989309 | None:intergenic | 25.0% |
! | AAGAAGTAGAATTCAAAATG+TGG | - | chr4_3:54989291-54989310 | Msa0648520:intron | 25.0% |
! | AGAAGTAGAATTCAAAATGT+GGG | - | chr4_3:54989292-54989311 | Msa0648520:intron | 25.0% |
! | GTTATAGAGAACATTGATAA+TGG | - | chr4_3:54989458-54989477 | Msa0648520:intron | 25.0% |
!!! | TTGAATGTTGTTTCTATTTC+TGG | + | chr4_3:54989589-54989608 | None:intergenic | 25.0% |
ATGTGAGAGAGAAAAAAGAA+CGG | - | chr4_3:54985122-54985141 | Msa0648520:three_prime_UTR | 30.0% | |
AACGGTTAAGAAAGATAATG+TGG | - | chr4_3:54985140-54985159 | Msa0648520:three_prime_UTR | 30.0% | |
!!! | AAATTGAGTTGGTTTTCATG+TGG | + | chr4_3:54985180-54985199 | None:intergenic | 30.0% |
CAGAAACTGAAAAATTGAGT+TGG | + | chr4_3:54985191-54985210 | None:intergenic | 30.0% | |
TTGAAATTATTGGAAGGAGA+AGG | + | chr4_3:54985230-54985249 | None:intergenic | 30.0% | |
GAGAAACACAACAACAATTT+AGG | + | chr4_3:54985283-54985302 | None:intergenic | 30.0% | |
!!! | ATTTGTTTTTTTGCTTGAGG+AGG | - | chr4_3:54985537-54985556 | Msa0648520:CDS | 30.0% |
AATTAAGCATCCAGAATCAT+TGG | + | chr4_3:54985845-54985864 | None:intergenic | 30.0% | |
CTTAGATCCATCTATTTGAT+TGG | - | chr4_3:54985890-54985909 | Msa0648520:CDS | 30.0% | |
!!! | GAATGGTGTGTTACTTTTAA+TGG | - | chr4_3:54985946-54985965 | Msa0648520:CDS | 30.0% |
TATTATTGCTTACATCAGGT+GGG | + | chr4_3:54986206-54986225 | None:intergenic | 30.0% | |
TGTCTATTATTTGGTTGGAT+TGG | - | chr4_3:54986503-54986522 | Msa0648520:CDS | 30.0% | |
!! | TATTATTTGGTTGGATTGGT+TGG | - | chr4_3:54986507-54986526 | Msa0648520:CDS | 30.0% |
AATACTGTTAAACATAAGGC+AGG | + | chr4_3:54986550-54986569 | None:intergenic | 30.0% | |
CACTAGATATTTGAATCAAC+TGG | + | chr4_3:54986618-54986637 | None:intergenic | 30.0% | |
AATTGACAGCAAAAAAGAAG+TGG | + | chr4_3:54986729-54986748 | None:intergenic | 30.0% | |
GATTCAAGTCATAAACCAAA+TGG | + | chr4_3:54986778-54986797 | None:intergenic | 30.0% | |
TTTCCAATTATTAGCTGTGT+CGG | + | chr4_3:54986869-54986888 | None:intergenic | 30.0% | |
TTCAGTGTAATTACAAGTGT+CGG | - | chr4_3:54986900-54986919 | Msa0648520:CDS | 30.0% | |
TCATCTACTAATATGAAGCA+CGG | + | chr4_3:54986989-54987008 | None:intergenic | 30.0% | |
AGTAAAATTCGACTCTTGAT+TGG | - | chr4_3:54987092-54987111 | Msa0648520:CDS | 30.0% | |
GTAAAATTCGACTCTTGATT+GGG | - | chr4_3:54987093-54987112 | Msa0648520:CDS | 30.0% | |
! | TTATCATGCTCTCTTTTGAA+AGG | - | chr4_3:54987176-54987195 | Msa0648520:CDS | 30.0% |
AGAAGATCTAAAGAAAGCAA+AGG | - | chr4_3:54987306-54987325 | Msa0648520:CDS | 30.0% | |
TGAATAAGAAGGAAGAAGAA+TGG | - | chr4_3:54987515-54987534 | Msa0648520:CDS | 30.0% | |
CTGCTTTCAACTTCAATATA+AGG | + | chr4_3:54987798-54987817 | None:intergenic | 30.0% | |
AAGTTAAGGAACTAGAAATG+AGG | - | chr4_3:54987974-54987993 | Msa0648520:intron | 30.0% | |
AGTTAAGGAACTAGAAATGA+GGG | - | chr4_3:54987975-54987994 | Msa0648520:intron | 30.0% | |
TGAAAAGTCAAAGAAGATTG+AGG | - | chr4_3:54988212-54988231 | Msa0648520:intron | 30.0% | |
TCAATGAATTGGAGAATTCT+AGG | - | chr4_3:54988346-54988365 | Msa0648520:intron | 30.0% | |
CAATGAATTGGAGAATTCTA+GGG | - | chr4_3:54988347-54988366 | Msa0648520:intron | 30.0% | |
AGAAAAAAGCAAAAAGGCAA+TGG | - | chr4_3:54988377-54988396 | Msa0648520:intron | 30.0% | |
GTTGCTTAGAAAATTCTCTT+TGG | + | chr4_3:54988451-54988470 | None:intergenic | 30.0% | |
CTAACTTCAAATCTTCAATC+TGG | + | chr4_3:54988500-54988519 | None:intergenic | 30.0% | |
! | TCTCTTCTTCAGTTTTCTTT+AGG | + | chr4_3:54988674-54988693 | None:intergenic | 30.0% |
GAAACTGAAGGAGAATATAT+TGG | - | chr4_3:54988866-54988885 | Msa0648520:CDS | 30.0% | |
TCAGAAAATTCAACGACTTT+AGG | + | chr4_3:54989071-54989090 | None:intergenic | 30.0% | |
!! | GTTGAATTTTCTGAAGAGAA+TGG | - | chr4_3:54989077-54989096 | Msa0648520:intron | 30.0% |
GAAAATGAATGGAAAACCAA+AGG | - | chr4_3:54989238-54989257 | Msa0648520:intron | 30.0% | |
! | GAGAGCTTTGATAAGATAAA+TGG | - | chr4_3:54989428-54989447 | Msa0648520:intron | 30.0% |
ATCAATGTTCTCTATAACAG+TGG | + | chr4_3:54989456-54989475 | None:intergenic | 30.0% | |
!! | ATAGAGAACATTGATAATGG+TGG | - | chr4_3:54989461-54989480 | Msa0648520:intron | 30.0% |
!! | TGTTGTTGTTCTTCTTTTAC+TGG | + | chr4_3:54989494-54989513 | None:intergenic | 30.0% |
AAAGCTTTGCTTGGAAAATT+TGG | - | chr4_3:54989533-54989552 | Msa0648520:intron | 30.0% | |
ATGGGCTTGTAATATTGTTT+AGG | - | chr4_3:54989712-54989731 | Msa0648520:five_prime_UTR | 30.0% | |
!!! | GTTTAGGATTTTTTTGGCTT+TGG | - | chr4_3:54989728-54989747 | Msa0648520:five_prime_UTR | 30.0% |
! | AATGGTGGAAAAAGAATAGT+TGG | + | chr4_3:54989811-54989830 | None:intergenic | 30.0% |
TGACATAAACAAGGAACAAA+TGG | + | chr4_3:54989829-54989848 | None:intergenic | 30.0% | |
!!! | AGTACTAGATTTTGAAGCCA+TGG | + | chr4_3:54985381-54985400 | None:intergenic | 35.0% |
TGGCTTCAAAATCTAGTACT+AGG | - | chr4_3:54985381-54985400 | Msa0648520:CDS | 35.0% | |
! | AGTACTAGGTTAGTCAAGTT+TGG | - | chr4_3:54985395-54985414 | Msa0648520:CDS | 35.0% |
!!! | TTACTTACTTTTGGTGTTGC+CGG | + | chr4_3:54986045-54986064 | None:intergenic | 35.0% |
! | GAAAGACGTGAATTTTGCAA+CGG | + | chr4_3:54986111-54986130 | None:intergenic | 35.0% |
ATTATTGCTTACATCAGGTG+GGG | + | chr4_3:54986205-54986224 | None:intergenic | 35.0% | |
CTATTATTGCTTACATCAGG+TGG | + | chr4_3:54986207-54986226 | None:intergenic | 35.0% | |
TTCAGTAGACTTGAGATGTT+AGG | + | chr4_3:54986353-54986372 | None:intergenic | 35.0% | |
! | GTCTACTGAAAAGTGTGATA+AGG | - | chr4_3:54986363-54986382 | Msa0648520:CDS | 35.0% |
TATCGAATCGAGATATGACT+CGG | + | chr4_3:54986584-54986603 | None:intergenic | 35.0% | |
GATATTATGAAGCACGGATA+CGG | - | chr4_3:54986808-54986827 | Msa0648520:CDS | 35.0% | |
AAAATTCCGAGCTGTTGAAT+TGG | - | chr4_3:54987471-54987490 | Msa0648520:CDS | 35.0% | |
! | AAAAAGAGCTTGAAAGTGTG+AGG | - | chr4_3:54987539-54987558 | Msa0648520:CDS | 35.0% |
TTCTTGTGTTGAATCTAGCA+AGG | + | chr4_3:54987755-54987774 | None:intergenic | 35.0% | |
ATGTAGAACTTGAAACCTCA+AGG | - | chr4_3:54987905-54987924 | Msa0648520:intron | 35.0% | |
GGAGTGGAAAAAGAAAGTTA+AGG | - | chr4_3:54987960-54987979 | Msa0648520:intron | 35.0% | |
GGTTGAAGAATCAAACAAGT+TGG | - | chr4_3:54987996-54988015 | Msa0648520:intron | 35.0% | |
AGTTAAGGAAGAGAAAGATC+AGG | - | chr4_3:54988257-54988276 | Msa0648520:intron | 35.0% | |
GAAAACTGAAGAAGAGAATG+CGG | - | chr4_3:54988677-54988696 | Msa0648520:intron | 35.0% | |
AGGAAGAATCAAATGCCAAT+AGG | - | chr4_3:54988748-54988767 | Msa0648520:intron | 35.0% | |
GGAAGAATCAAATGCCAATA+GGG | - | chr4_3:54988749-54988768 | Msa0648520:CDS | 35.0% | |
TCAGTTGAAGGAAAATCTGA+AGG | - | chr4_3:54988782-54988801 | Msa0648520:CDS | 35.0% | |
CTCCACCTTCTTAATAGATT+CGG | + | chr4_3:54988952-54988971 | None:intergenic | 35.0% | |
AATCACACTGAGCATGAAAA+TGG | - | chr4_3:54989008-54989027 | Msa0648520:intron | 35.0% | |
GCATGAAAATGGTGATCTTT+CGG | - | chr4_3:54989019-54989038 | Msa0648520:intron | 35.0% | |
!! | TTTTCTGAAGAGAATGGTCA+TGG | - | chr4_3:54989083-54989102 | Msa0648520:intron | 35.0% |
! | TTTGAGTTCTTCCTGATTGA+GGG | + | chr4_3:54989147-54989166 | None:intergenic | 35.0% |
! | CCATTCATTTTCACAGGTTT+AGG | + | chr4_3:54989230-54989249 | None:intergenic | 35.0% |
CCTAAACCTGTGAAAATGAA+TGG | - | chr4_3:54989227-54989246 | Msa0648520:intron | 35.0% | |
! | GGTTTTCCATTCATTTTCAC+AGG | + | chr4_3:54989236-54989255 | None:intergenic | 35.0% |
AAGAAGAAGAAAGCTTTGCT+TGG | - | chr4_3:54989524-54989543 | Msa0648520:intron | 35.0% | |
!!! | GATTTTTTTGGCTTTGGTTG+TGG | - | chr4_3:54989734-54989753 | Msa0648520:five_prime_UTR | 35.0% |
TTGCTACCAACATGATGATA+TGG | + | chr4_3:54989764-54989783 | None:intergenic | 35.0% | |
CATAAACAAGGAACAAATGG+TGG | + | chr4_3:54989826-54989845 | None:intergenic | 35.0% | |
GAATTGGGATGACATAAACA+AGG | + | chr4_3:54989838-54989857 | None:intergenic | 35.0% | |
ATGTCATCCCAATTCAAATG+AGG | - | chr4_3:54989843-54989862 | Msa0648520:five_prime_UTR | 35.0% | |
TGTCATCCCAATTCAAATGA+GGG | - | chr4_3:54989844-54989863 | Msa0648520:five_prime_UTR | 35.0% | |
TGAAAGCCCTCATTTGAATT+GGG | + | chr4_3:54989853-54989872 | None:intergenic | 35.0% | |
! | TACTTGTTACCTTGCTTCCA+TGG | - | chr4_3:54985361-54985380 | Msa0648520:exon | 40.0% |
!!! | ATTTTGAAGCCATGGAAGCA+AGG | + | chr4_3:54985373-54985392 | None:intergenic | 40.0% |
!! | GCTGTTGTTTCCAATGATTC+TGG | - | chr4_3:54985832-54985851 | Msa0648520:CDS | 40.0% |
GCAAAATTCACGTCTTTCTG+TGG | - | chr4_3:54986113-54986132 | Msa0648520:CDS | 40.0% | |
TTGAACTCGAGATGAGATTC+AGG | + | chr4_3:54986656-54986675 | None:intergenic | 40.0% | |
GAACCATTCTAACGAATCTC+TGG | - | chr4_3:54986684-54986703 | Msa0648520:CDS | 40.0% | |
TAGCCAGAGATTCGTTAGAA+TGG | + | chr4_3:54986690-54986709 | None:intergenic | 40.0% | |
GACAGCAAAAAAGAAGTGGT+TGG | + | chr4_3:54986725-54986744 | None:intergenic | 40.0% | |
! | GACACTTCTCTTTTGCCATT+TGG | - | chr4_3:54986760-54986779 | Msa0648520:CDS | 40.0% |
! | GTTGAAAGAAGCACAAAGAG+TGG | - | chr4_3:54987375-54987394 | Msa0648520:CDS | 40.0% |
!! | AGCTCGGAATTTTTCGATCT+CGG | + | chr4_3:54987464-54987483 | None:intergenic | 40.0% |
GTTCTTAGCATCACACATCA+TGG | + | chr4_3:54987638-54987657 | None:intergenic | 40.0% | |
CATCAGCATGATTTAATGCC+TGG | + | chr4_3:54987660-54987679 | None:intergenic | 40.0% | |
TACTTTCTCAGCATGAACCT+CGG | + | chr4_3:54987698-54987717 | None:intergenic | 40.0% | |
AGCTGAATTGACACAGTTGA+AGG | - | chr4_3:54987729-54987748 | Msa0648520:intron | 40.0% | |
TCTCAAGAAAGAACTCGACA+AGG | - | chr4_3:54987828-54987847 | Msa0648520:intron | 40.0% | |
CTCAAGAAAGAACTCGACAA+GGG | - | chr4_3:54987829-54987848 | Msa0648520:intron | 40.0% | |
AGGGAATGAGTTATGATGAG+AGG | - | chr4_3:54987848-54987867 | Msa0648520:intron | 40.0% | |
AGAACTTGAAACCTCAAGGA+CGG | - | chr4_3:54987909-54987928 | Msa0648520:intron | 40.0% | |
TTATGCAAACAGTCTGCTTG+AGG | - | chr4_3:54987939-54987958 | Msa0648520:intron | 40.0% | |
CTGCTTCATTACAGATTCCA+AGG | + | chr4_3:54988040-54988059 | None:intergenic | 40.0% | |
AGCTGCTACTCTTAAAGAGA+AGG | - | chr4_3:54988101-54988120 | Msa0648520:intron | 40.0% | |
TGCTACTCTTAAAGAGAAGG+TGG | - | chr4_3:54988104-54988123 | Msa0648520:intron | 40.0% | |
GCTACTCTTAAAGAGAAGGT+GGG | - | chr4_3:54988105-54988124 | Msa0648520:intron | 40.0% | |
CTTCCTTAGCCATAAGAAGA+CGG | + | chr4_3:54988185-54988204 | None:intergenic | 40.0% | |
TTCCTTAACTGCCTCAAGTT+CGG | + | chr4_3:54988247-54988266 | None:intergenic | 40.0% | |
TTCTAAGCAACCAAGCTGAA+AGG | - | chr4_3:54988460-54988479 | Msa0648520:intron | 40.0% | |
TCTAAGCAACCAAGCTGAAA+GGG | - | chr4_3:54988461-54988480 | Msa0648520:intron | 40.0% | |
GAATGTGTTTGAGAACTCGA+AGG | - | chr4_3:54988611-54988630 | Msa0648520:intron | 40.0% | |
GGAAGCCGAATCTATTAAGA+AGG | - | chr4_3:54988944-54988963 | Msa0648520:intron | 40.0% | |
AGCCGAATCTATTAAGAAGG+TGG | - | chr4_3:54988947-54988966 | Msa0648520:intron | 40.0% | |
CGAATCTATTAAGAAGGTGG+AGG | - | chr4_3:54988950-54988969 | Msa0648520:intron | 40.0% | |
TTCATGCTCAGTGTGATTTC+TGG | + | chr4_3:54989006-54989025 | None:intergenic | 40.0% | |
GAAGAGAATGGTCATGGATA+TGG | - | chr4_3:54989089-54989108 | Msa0648520:intron | 40.0% | |
! | GTTTGAGTTCTTCCTGATTG+AGG | + | chr4_3:54989148-54989167 | None:intergenic | 40.0% |
TCTTTGCTCTCATCTTCCTT+TGG | + | chr4_3:54989257-54989276 | None:intergenic | 40.0% | |
AGGAAGATGAGAGCAAAGAA+AGG | - | chr4_3:54989258-54989277 | Msa0648520:intron | 40.0% | |
GGAAGATGAGAGCAAAGAAA+GGG | - | chr4_3:54989259-54989278 | Msa0648520:intron | 40.0% | |
GAGTTGCACGATTGAGAAAA+AGG | - | chr4_3:54989316-54989335 | Msa0648520:intron | 40.0% | |
ACTTCCAGAGGCTAAATCAT+TGG | - | chr4_3:54989364-54989383 | Msa0648520:intron | 40.0% | |
TCTTCCAATGATTTAGCCTC+TGG | + | chr4_3:54989371-54989390 | None:intergenic | 40.0% | |
AGAGGCTAAATCATTGGAAG+AGG | - | chr4_3:54989370-54989389 | Msa0648520:intron | 40.0% | |
ACTGAGTCAAAGACAGAAGA+AGG | - | chr4_3:54989395-54989414 | Msa0648520:intron | 40.0% | |
GGTTCTCCATATCATCATGT+TGG | - | chr4_3:54989755-54989774 | Msa0648520:five_prime_UTR | 40.0% | |
CTGAAAGCCCTCATTTGAAT+TGG | + | chr4_3:54989854-54989873 | None:intergenic | 40.0% | |
GAAAGATAATGTGGCCTGTC+TGG | - | chr4_3:54985149-54985168 | Msa0648520:three_prime_UTR | 45.0% | |
TTCATGTGGTTGTTCCAGAC+AGG | + | chr4_3:54985166-54985185 | None:intergenic | 45.0% | |
! | TGGTGCTTTGTTGGAACTGT+CGG | + | chr4_3:54986022-54986041 | None:intergenic | 45.0% |
!! | TCAGATGCTGATTTGGTCAC+TGG | + | chr4_3:54986078-54986097 | None:intergenic | 45.0% |
! | CGTGAATTTTGCAACGGAGA+TGG | + | chr4_3:54986105-54986124 | None:intergenic | 45.0% |
!! | GGCTTTGAATTCACAGATCG+TGG | + | chr4_3:54986147-54986166 | None:intergenic | 45.0% |
ATTCAAAGCCAGCTGTTGAG+CGG | - | chr4_3:54986157-54986176 | Msa0648520:CDS | 45.0% | |
! | GGAAACATCTGAGATGTGCA+AGG | - | chr4_3:54986384-54986403 | Msa0648520:CDS | 45.0% |
TAAGGCAGGAACATCTTCAG+CGG | + | chr4_3:54986536-54986555 | None:intergenic | 45.0% | |
ACGCCGACACAGCTAATAAT+TGG | - | chr4_3:54986863-54986882 | Msa0648520:CDS | 45.0% | |
GAGCTTCTCATTTGCTTCCT+CGG | + | chr4_3:54987401-54987420 | None:intergenic | 45.0% | |
CCTGTTCCAATTCAACAGCT+CGG | + | chr4_3:54987480-54987499 | None:intergenic | 45.0% | |
GATGTGTGATGCTAAGAACC+AGG | - | chr4_3:54987639-54987658 | Msa0648520:CDS | 45.0% | |
ATAAGATTCAGCCGTCCTTG+AGG | + | chr4_3:54987923-54987942 | None:intergenic | 45.0% | |
GAGATCTGCATCAGAATCCT+TGG | - | chr4_3:54988020-54988039 | Msa0648520:intron | 45.0% | |
GAGACAAAAAGCCGATCTTG+AGG | - | chr4_3:54988149-54988168 | Msa0648520:intron | 45.0% | |
! | GCGTTCTGAATCCTCAAGAT+CGG | + | chr4_3:54988163-54988182 | None:intergenic | 45.0% |
TTCAGAACGCCGTCTTCTTA+TGG | - | chr4_3:54988173-54988192 | Msa0648520:intron | 45.0% | |
ATCCGAACTTGAGGCAGTTA+AGG | - | chr4_3:54988242-54988261 | Msa0648520:intron | 45.0% | |
TAATAGGGTCTGCACATGAG+AGG | + | chr4_3:54988307-54988326 | None:intergenic | 45.0% | |
CATAGCTTTCCCTTTCAGCT+TGG | + | chr4_3:54988473-54988492 | None:intergenic | 45.0% | |
AGTCAATGCTTGATGAAGCG+CGG | - | chr4_3:54988547-54988566 | Msa0648520:intron | 45.0% | |
GTCTGAGAACGTGAAACTGA+AGG | - | chr4_3:54988854-54988873 | Msa0648520:CDS | 45.0% | |
AAAACGATGAACTCCGAGCT+AGG | - | chr4_3:54988922-54988941 | Msa0648520:CDS | 45.0% | |
AAACGATGAACTCCGAGCTA+GGG | - | chr4_3:54988923-54988942 | Msa0648520:CDS | 45.0% | |
GGAGGAGTTGTCAAAGTTAC+TGG | - | chr4_3:54988968-54988987 | Msa0648520:intron | 45.0% | |
TGATCTTTCGGACAGCGAAA+AGG | - | chr4_3:54989031-54989050 | Msa0648520:intron | 45.0% | |
GAGAATGGTCATGGATATGG+AGG | - | chr4_3:54989092-54989111 | Msa0648520:intron | 45.0% | |
TGGAGGAGAGGAAATTCCAA+AGG | - | chr4_3:54989109-54989128 | Msa0648520:intron | 45.0% | |
AGGGAAAGCTCAACAACCTT+TGG | + | chr4_3:54989128-54989147 | None:intergenic | 45.0% | |
TGTTGAGCTTTCCCTCAATC+AGG | - | chr4_3:54989133-54989152 | Msa0648520:intron | 45.0% | |
GAGTCAAAGACAGAAGAAGG+TGG | - | chr4_3:54989398-54989417 | Msa0648520:intron | 45.0% | |
AAGACAGAAGAAGGTGGTGA+TGG | - | chr4_3:54989404-54989423 | Msa0648520:intron | 45.0% | |
! | GGAAGCTTGCTCAAGAAGAA+AGG | - | chr4_3:54989554-54989573 | Msa0648520:intron | 45.0% |
! | AGCTTGCTCAAGAAGAAAGG+TGG | - | chr4_3:54989557-54989576 | Msa0648520:intron | 45.0% |
!! | AAAAAAAAAAAAAACAAAAA+TGG | + | chr4_3:54985493-54985512 | None:intergenic | 5.0% |
!! | AATTTGATATTTAAATATTA+GGG | + | chr4_3:54989878-54989897 | None:intergenic | 5.0% |
!! | AAATTTGATATTTAAATATT+AGG | + | chr4_3:54989879-54989898 | None:intergenic | 5.0% |
! | GCTTTGTTGGAACTGTCGGA+TGG | + | chr4_3:54986018-54986037 | None:intergenic | 50.0% |
! | CAGTTCCAACAAAGCACCAC+CGG | - | chr4_3:54986023-54986042 | Msa0648520:CDS | 50.0% |
!!! | CTTACTTTTGGTGTTGCCGG+TGG | + | chr4_3:54986042-54986061 | None:intergenic | 50.0% |
! | TGGCGACTCAGATGCTGATT+TGG | + | chr4_3:54986085-54986104 | None:intergenic | 50.0% |
ATTGCTTACATCAGGTGGGG+TGG | + | chr4_3:54986202-54986221 | None:intergenic | 50.0% | |
ATGAAGCACGGATACGGACA+CGG | - | chr4_3:54986814-54986833 | Msa0648520:CDS | 50.0% | |
!! | TACAAGTGTCGGTGTCGTGT+CGG | - | chr4_3:54986911-54986930 | Msa0648520:CDS | 50.0% |
TATGAAGCACGGACACTCCT+CGG | + | chr4_3:54986978-54986997 | None:intergenic | 50.0% | |
CGACTCTTGATTGGGAAAGC+AGG | - | chr4_3:54987101-54987120 | Msa0648520:CDS | 50.0% | |
ACAAGCTCCAAGAGCTGCAA+AGG | - | chr4_3:54987249-54987268 | Msa0648520:CDS | 50.0% | |
CAAGCTCCAAGAGCTGCAAA+GGG | - | chr4_3:54987250-54987269 | Msa0648520:CDS | 50.0% | |
TCTGAACCCTTTGCAGCTCT+TGG | + | chr4_3:54987259-54987278 | None:intergenic | 50.0% | |
GCAGATCCTTCAAGCTGAGA+AGG | - | chr4_3:54987330-54987349 | Msa0648520:CDS | 50.0% | |
CCTTCTCCTTCTCAGCTTGA+AGG | + | chr4_3:54987339-54987358 | None:intergenic | 50.0% | |
CCTTCAAGCTGAGAAGGAGA+AGG | - | chr4_3:54987336-54987355 | Msa0648520:CDS | 50.0% | |
GGAAGCAAATGAGAAGCTCC+AGG | - | chr4_3:54987402-54987421 | Msa0648520:CDS | 50.0% | |
!! | AGCATTGGTGGCTCAAAAGC+AGG | - | chr4_3:54987426-54987445 | Msa0648520:CDS | 50.0% |
GGCTCAAAAGCAGGCTAAAG+AGG | - | chr4_3:54987435-54987454 | Msa0648520:CDS | 50.0% | |
CCGAGCTGTTGAATTGGAAC+AGG | - | chr4_3:54987477-54987496 | Msa0648520:CDS | 50.0% | |
GCTGTTGAATTGGAACAGGC+TGG | - | chr4_3:54987481-54987500 | Msa0648520:CDS | 50.0% | |
TGATGCAGCTAAAGTTGCCG+AGG | - | chr4_3:54987678-54987697 | Msa0648520:CDS | 50.0% | |
CAAACAGTCTGCTTGAGGAG+TGG | - | chr4_3:54987944-54987963 | Msa0648520:intron | 50.0% | |
ACGCCGTCTTCTTATGGCTA+AGG | - | chr4_3:54988179-54988198 | Msa0648520:intron | 50.0% | |
GGCTCTTGAATCCGAACTTG+AGG | - | chr4_3:54988233-54988252 | Msa0648520:intron | 50.0% | |
TTGAGAACTCGAAGGCTGAG+TGG | - | chr4_3:54988619-54988638 | Msa0648520:intron | 50.0% | |
TGAGAACTCGAAGGCTGAGT+GGG | - | chr4_3:54988620-54988639 | Msa0648520:intron | 50.0% | |
CTGAGCTTCTTCGTCCCTAT+TGG | + | chr4_3:54988766-54988785 | None:intergenic | 50.0% | |
GGACGAAGAAGCTCAGTTGA+AGG | - | chr4_3:54988770-54988789 | Msa0648520:CDS | 50.0% | |
TCTGAAGGAAGTTGAGACCG+AGG | - | chr4_3:54988797-54988816 | Msa0648520:CDS | 50.0% | |
TTCCTGCAGATGGATAGCCT+CGG | + | chr4_3:54988817-54988836 | None:intergenic | 50.0% | |
!! | CCTTTAGAGCTTCCTGCAGA+TGG | + | chr4_3:54988827-54988846 | None:intergenic | 50.0% |
! | CCATCTGCAGGAAGCTCTAA+AGG | - | chr4_3:54988824-54988843 | Msa0648520:CDS | 50.0% |
TAGATTCGGCTTCCCTAGCT+CGG | + | chr4_3:54988938-54988957 | None:intergenic | 50.0% | |
TGGTCATGGATATGGAGGAG+AGG | - | chr4_3:54989097-54989116 | Msa0648520:intron | 50.0% | |
ACCAGAGAGAGAACTTCCAG+AGG | - | chr4_3:54989352-54989371 | Msa0648520:intron | 50.0% | |
TGTTGCCGGTGGTGCTTTGT+TGG | + | chr4_3:54986031-54986050 | None:intergenic | 55.0% | |
! | GCTGATTTCCGCTCAACAGC+TGG | + | chr4_3:54986168-54986187 | None:intergenic | 55.0% |
! | AGAAGCACAAAGAGTGGCCG+AGG | - | chr4_3:54987381-54987400 | Msa0648520:CDS | 55.0% |
TGAGAAGCTCCAGGCAGCAT+TGG | - | chr4_3:54987411-54987430 | Msa0648520:CDS | 55.0% | |
TTTGAGCCACCAATGCTGCC+TGG | + | chr4_3:54987423-54987442 | None:intergenic | 55.0% | |
TGTGAGGAACCAGCATGCCT+TGG | - | chr4_3:54987555-54987574 | Msa0648520:CDS | 55.0% | |
GAACCAGCATGCCTTGGATG+TGG | - | chr4_3:54987561-54987580 | Msa0648520:CDS | 55.0% | |
CTCAGTGGTTGAGGCAAGAG+TGG | + | chr4_3:54987587-54987606 | None:intergenic | 55.0% | |
CACTCTTGCCTCAACCACTG+AGG | - | chr4_3:54987585-54987604 | Msa0648520:CDS | 55.0% | |
CTCAAGCTCCTCAGTGGTTG+AGG | + | chr4_3:54987596-54987615 | None:intergenic | 55.0% | |
CAACCACTGAGGAGCTTGAG+CGG | - | chr4_3:54987596-54987615 | Msa0648520:CDS | 55.0% | |
AACCACTGAGGAGCTTGAGC+GGG | - | chr4_3:54987597-54987616 | Msa0648520:CDS | 55.0% | |
TGAAGAAGAGAATGCGGCCG+CGG | - | chr4_3:54988683-54988702 | Msa0648520:intron | 55.0% | |
! | GCCTCTGGAAGTTCTCTCTC+TGG | + | chr4_3:54989356-54989375 | None:intergenic | 55.0% |
ACGGATACGGACACGGACAC+CGG | - | chr4_3:54986821-54986840 | Msa0648520:CDS | 60.0% | |
GTCAGTGTCCGTGTCGTGTC+CGG | + | chr4_3:54986843-54986862 | None:intergenic | 60.0% | |
!! | TGTCGGTGTCGTGTCGGTGT+CGG | - | chr4_3:54986917-54986936 | Msa0648520:CDS | 60.0% |
ACACGACACGTGTCCGACAC+CGG | - | chr4_3:54986940-54986959 | Msa0648520:CDS | 60.0% | |
GATTAGGCGTGTCCCGGTGT+CGG | + | chr4_3:54986956-54986975 | None:intergenic | 60.0% | |
! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr4_3:54986962-54986981 | None:intergenic | 60.0% |
GCACGGACACTCCTCGGATT+AGG | + | chr4_3:54986972-54986991 | None:intergenic | 60.0% | |
! | GAAGCTCCAGGCAGCATTGG+TGG | - | chr4_3:54987414-54987433 | Msa0648520:CDS | 60.0% |
TGGCCACATCCAAGGCATGC+TGG | + | chr4_3:54987567-54987586 | None:intergenic | 60.0% | |
GGCAAGAGTGGCCACATCCA+AGG | + | chr4_3:54987575-54987594 | None:intergenic | 60.0% | |
AACCCGCTCAAGCTCCTCAG+TGG | + | chr4_3:54987602-54987621 | None:intergenic | 60.0% | |
GACCGAGGCTATCCATCTGC+AGG | - | chr4_3:54988812-54988831 | Msa0648520:CDS | 60.0% | |
CACGGACACCGGACACGACA+CGG | - | chr4_3:54986832-54986851 | Msa0648520:CDS | 65.0% | |
CACGACACGTGTCCGACACC+GGG | - | chr4_3:54986941-54986960 | Msa0648520:CDS | 65.0% | |
ACCGGGACACGCCTAATCCG+AGG | - | chr4_3:54986958-54986977 | Msa0648520:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 54985060 | 54989901 | 54985060 | ID=Msa0648520;Name=Msa0648520 |
chr4_3 | mRNA | 54985060 | 54989901 | 54985060 | ID=Msa0648520-mRNA-1;Parent=Msa0648520;Name=Msa0648520-mRNA-1;_AED=0.00;_eAED=0.00;_QI=320|1|1|1|1|1|3|306|858 |
chr4_3 | exon | 54985060 | 54987714 | 54985060 | ID=Msa0648520-mRNA-1:exon:13980;Parent=Msa0648520-mRNA-1 |
chr4_3 | exon | 54988749 | 54988953 | 54988749 | ID=Msa0648520-mRNA-1:exon:13979;Parent=Msa0648520-mRNA-1 |
chr4_3 | exon | 54989559 | 54989901 | 54989559 | ID=Msa0648520-mRNA-1:exon:13978;Parent=Msa0648520-mRNA-1 |
chr4_3 | five_prime_UTR | 54989582 | 54989901 | 54989582 | ID=Msa0648520-mRNA-1:five_prime_utr;Parent=Msa0648520-mRNA-1 |
chr4_3 | CDS | 54989559 | 54989581 | 54989559 | ID=Msa0648520-mRNA-1:cds;Parent=Msa0648520-mRNA-1 |
chr4_3 | CDS | 54988749 | 54988953 | 54988749 | ID=Msa0648520-mRNA-1:cds;Parent=Msa0648520-mRNA-1 |
chr4_3 | CDS | 54985366 | 54987714 | 54985366 | ID=Msa0648520-mRNA-1:cds;Parent=Msa0648520-mRNA-1 |
chr4_3 | three_prime_UTR | 54985060 | 54985365 | 54985060 | ID=Msa0648520-mRNA-1:three_prime_utr;Parent=Msa0648520-mRNA-1 |
Gene Sequence |
Protein sequence |