Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494140 | XP_024633888.1 | 96.085 | 281 | 7 | 2 | 28 | 307 | 1 | 278 | 0.0 | 550 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494140 | sp|P74516|TRML_SYNY3 | 49.682 | 157 | 71 | 3 | 124 | 280 | 1 | 149 | 1.89e-41 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494140 | G7IWJ3 | 96.085 | 281 | 7 | 2 | 28 | 307 | 1 | 278 | 0.0 | 550 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012460 | Msa0494140 | 0.803736 | 3.023105e-49 | -8.615850e-47 |
| Msa0077910 | Msa0494140 | 0.814486 | 1.503614e-51 | -8.615850e-47 |
| Msa0122210 | Msa0494140 | 0.801881 | 7.303589e-49 | -8.615850e-47 |
| Msa0125800 | Msa0494140 | 0.813523 | 2.451380e-51 | -8.615850e-47 |
| Msa0144340 | Msa0494140 | 0.807800 | 4.234455e-50 | -8.615850e-47 |
| Msa0149070 | Msa0494140 | 0.804527 | 2.069797e-49 | -8.615850e-47 |
| Msa0170440 | Msa0494140 | 0.815337 | 9.733727e-52 | -8.615850e-47 |
| Msa0379450 | Msa0494140 | 0.800505 | 1.396829e-48 | -8.615850e-47 |
| Msa0399180 | Msa0494140 | 0.823831 | 1.120662e-53 | -8.615850e-47 |
| Msa0475130 | Msa0494140 | 0.801797 | 7.601629e-49 | -8.615850e-47 |
| Msa0280120 | Msa0494140 | 0.814770 | 1.300905e-51 | -8.615850e-47 |
| Msa0307460 | Msa0494140 | 0.804873 | 1.752592e-49 | -8.615850e-47 |
| Msa0334780 | Msa0494140 | 0.814549 | 1.455665e-51 | -8.615850e-47 |
| Msa0494140 | Msa0504740 | 0.824422 | 8.143500e-54 | -8.615850e-47 |
| Msa0494140 | Msa0552670 | 0.804087 | 2.556420e-49 | -8.615850e-47 |
| Msa0494140 | Msa0647460 | 0.802411 | 5.682140e-49 | -8.615850e-47 |
| Msa0494140 | Msa0703720 | 0.814279 | 1.670216e-51 | -8.615850e-47 |
| Msa0494140 | Msa0704720 | 0.804788 | 1.825718e-49 | -8.615850e-47 |
| Msa0494140 | Msa0705250 | 0.822409 | 2.406080e-53 | -8.615850e-47 |
| Msa0494140 | Msa0970090 | 0.850760 | 1.378986e-60 | -8.615850e-47 |
| Msa0494140 | Msa1033120 | 0.839508 | 1.519263e-57 | -8.615850e-47 |
| Msa0494140 | Msa1045440 | 0.807619 | 4.626796e-50 | -8.615850e-47 |
| Msa0494140 | Msa1067430 | 0.809410 | 1.918241e-50 | -8.615850e-47 |
| Msa0494140 | Msa1149960 | 0.802061 | 6.707081e-49 | -8.615850e-47 |
| Msa0494140 | Msa1208630 | 0.819568 | 1.084535e-52 | -8.615850e-47 |
| Msa0494140 | Msa1391430 | 0.818534 | 1.863933e-52 | -8.615850e-47 |
| Msa0494140 | Msa1398740 | 0.826600 | 2.481842e-54 | -8.615850e-47 |
| Msa0494140 | Msa1415250 | 0.813785 | 2.146548e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494140 | MtrunA17_Chr3g0087781 | 96.085 | 281 | 7 | 2 | 28 | 307 | 1 | 278 | 0.0 | 550 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494140 | AT5G26880.1 | 61.338 | 269 | 97 | 3 | 38 | 306 | 1 | 262 | 2.69e-115 | 333 |
Find 110 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCCCTTGATCAGGTTTC+AGG | 0.229973 | 3_4:-21790621 | None:intergenic |
| AAGAGGAAAGGGGAAGGAGG+TGG | 0.261145 | 3_4:-21784835 | None:intergenic |
| GGGAAGGAGGTGGGGAGGAG+AGG | 0.266105 | 3_4:-21784825 | None:intergenic |
| GAGGTGGGGAGGAGAGGAAA+TGG | 0.273709 | 3_4:-21784819 | None:intergenic |
| CAAATTAACTCTCCTAAAAT+AGG | 0.278972 | 3_4:-21790646 | None:intergenic |
| CTTGTCTCCTCATAATGTTT+TGG | 0.288296 | 3_4:+21790924 | Msa0494140:three_prime_UTR |
| GCCAGTTCAACTAGTTGAAT+TGG | 0.303960 | 3_4:+21790726 | Msa0494140:three_prime_UTR |
| GAAAGGGGAAGGAGGTGGGG+AGG | 0.307414 | 3_4:-21784830 | None:intergenic |
| TTGTTAAAATTCACGATTCT+TGG | 0.322273 | 3_4:+21789552 | Msa0494140:CDS |
| CTGTTGGACTACACTTAGTT+GGG | 0.340052 | 3_4:+21788170 | Msa0494140:CDS |
| TTGCAATCTAACAATGCTTC+AGG | 0.341667 | 3_4:-21790322 | None:intergenic |
| GAGGAAAGGGGAAGGAGGTG+GGG | 0.348699 | 3_4:-21784833 | None:intergenic |
| GGTAGTGAGAGAAGAGGAAA+GGG | 0.350632 | 3_4:-21784846 | None:intergenic |
| GTGGGGAGGAGAGGAAATGG+AGG | 0.351290 | 3_4:-21784816 | None:intergenic |
| AGAGGAAAGGGGAAGGAGGT+GGG | 0.352814 | 3_4:-21784834 | None:intergenic |
| TGCTGCTGCTGCTAGGTTGA+GGG | 0.381704 | 3_4:-21784720 | None:intergenic |
| TGTTGTTCTTGGTAGATTCC+AGG | 0.384664 | 3_4:+21788109 | Msa0494140:intron |
| GCAATGCAGCCAGTGTTTCC+TGG | 0.391133 | 3_4:-21788127 | None:intergenic |
| ACACTTCAGTCTGGTTGAAC+TGG | 0.393113 | 3_4:+21790785 | Msa0494140:three_prime_UTR |
| CAACTAAACTAGGCGTTTGT+TGG | 0.393354 | 3_4:+21790846 | Msa0494140:three_prime_UTR |
| CTGCTGCTGCTGCTAGGTTG+AGG | 0.398814 | 3_4:-21784721 | None:intergenic |
| GATTGCAAAACTGAACCATT+TGG | 0.401086 | 3_4:+21790337 | Msa0494140:CDS |
| ACTAGTTGAACTGGCCGGTT+CGG | 0.409751 | 3_4:-21790718 | None:intergenic |
| CTGACATATGTTTCAACCAT+TGG | 0.414032 | 3_4:-21790379 | None:intergenic |
| GTTTGGATCGAAAATGAAAA+GGG | 0.415927 | 3_4:-21784748 | None:intergenic |
| TGTTAAAATTCACGATTCTT+GGG | 0.419531 | 3_4:+21789553 | Msa0494140:CDS |
| CCCAATTCAACTAGTTGAAC+TGG | 0.424180 | 3_4:-21790727 | None:intergenic |
| AGTTGTGCTTGTTTCACCTC+AGG | 0.425774 | 3_4:+21785161 | Msa0494140:CDS |
| TCATCCACCTTATATCCTAA+TGG | 0.431330 | 3_4:-21788501 | None:intergenic |
| TTGTTTGGTGCTGAAACTAC+TGG | 0.435992 | 3_4:+21790292 | Msa0494140:CDS |
| ATCATGTTTACACTTCAGTC+TGG | 0.436143 | 3_4:+21790776 | Msa0494140:three_prime_UTR |
| AGTCTCAGGGCAGCAGGAAA+TGG | 0.436330 | 3_4:-21784692 | None:intergenic |
| AAAACTAAAGCGAGCTGGAT+TGG | 0.437616 | 3_4:+21788527 | Msa0494140:CDS |
| CAACTAGTTGAATTGGGAAC+TGG | 0.442104 | 3_4:+21790733 | Msa0494140:three_prime_UTR |
| GCTGTTGGACTACACTTAGT+TGG | 0.447539 | 3_4:+21788169 | Msa0494140:CDS |
| GGAGAGGAAATGGAGGGAAA+AGG | 0.447582 | 3_4:-21784809 | None:intergenic |
| AGGAGACAAGGTCATTTATG+AGG | 0.450380 | 3_4:-21790911 | None:intergenic |
| GGAGTGTTCCACTTGGAACT+TGG | 0.453010 | 3_4:-21784608 | None:intergenic |
| CCAGTTCAACTAGTTGAATT+GGG | 0.453633 | 3_4:+21790727 | Msa0494140:three_prime_UTR |
| AGCGAGCTGGATTGGACTAC+TGG | 0.454007 | 3_4:+21788535 | Msa0494140:CDS |
| AGTTTGGATCGAAAATGAAA+AGG | 0.457319 | 3_4:-21784749 | None:intergenic |
| GGTTGAGGGATTTCAGTCTC+AGG | 0.459669 | 3_4:-21784706 | None:intergenic |
| GAGAAGAGGAAAGGGGAAGG+AGG | 0.459832 | 3_4:-21784838 | None:intergenic |
| TGACATATGTTTCAACCATT+GGG | 0.461962 | 3_4:-21790378 | None:intergenic |
| ATAGGACTATGCCCTTGATC+AGG | 0.462101 | 3_4:-21790628 | None:intergenic |
| CAATACAGAGAACATTCCCT+TGG | 0.477290 | 3_4:+21790567 | Msa0494140:three_prime_UTR |
| GATTTCAGTCTCAGGGCAGC+AGG | 0.479388 | 3_4:-21784698 | None:intergenic |
| GGAAGGTGAAAAGAGGTTGC+TGG | 0.485871 | 3_4:+21789688 | Msa0494140:intron |
| GTAAGCTCCAAAACATTATG+AGG | 0.487450 | 3_4:-21790931 | None:intergenic |
| CTCTCTCTGCATCGGATAGA+CGG | 0.490366 | 3_4:+21784632 | Msa0494140:CDS |
| TGGTAGTGAGAGAAGAGGAA+AGG | 0.500507 | 3_4:-21784847 | None:intergenic |
| TTGCCACATGGTGTTGGAGA+GGG | 0.501044 | 3_4:+21785105 | Msa0494140:CDS |
| AATACAGAGAACATTCCCTT+GGG | 0.516149 | 3_4:+21790568 | Msa0494140:three_prime_UTR |
| TTGATAGTTCCACCACCAAA+TGG | 0.517426 | 3_4:-21790352 | None:intergenic |
| AAAATTCACGATTCTTGGGA+AGG | 0.519743 | 3_4:+21789557 | Msa0494140:CDS |
| TGGTACAGGAAGGTGAAAAG+AGG | 0.523032 | 3_4:+21789681 | Msa0494140:intron |
| GGTAGTTTGCCACATGGTGT+TGG | 0.523607 | 3_4:+21785099 | Msa0494140:CDS |
| CATGACCTGAAACCTGATCA+AGG | 0.526495 | 3_4:+21790616 | Msa0494140:three_prime_UTR |
| TGAGAGAAGAGGAAAGGGGA+AGG | 0.529462 | 3_4:-21784841 | None:intergenic |
| TTGGGAACTGGCGAGTTCGT+TGG | 0.530559 | 3_4:+21790745 | Msa0494140:three_prime_UTR |
| ATCAATTAAGAGAAAACCCA+AGG | 0.537643 | 3_4:-21790584 | None:intergenic |
| GAGAATGAGATAAAGAAGGA+AGG | 0.539421 | 3_4:+21785078 | Msa0494140:CDS |
| CAATGGTTGAAACATATGTC+AGG | 0.541341 | 3_4:+21790380 | Msa0494140:CDS |
| ATTACTGGTAGTGAGAGAAG+AGG | 0.542591 | 3_4:-21784852 | None:intergenic |
| ACATGTGCAGCATCAGCTGT+TGG | 0.543758 | 3_4:+21788154 | Msa0494140:CDS |
| ATGGAGGGAAAAGGTGAGGT+GGG | 0.544197 | 3_4:-21784800 | None:intergenic |
| TGCCACATGGTGTTGGAGAG+GGG | 0.544512 | 3_4:+21785106 | Msa0494140:CDS |
| TGCTGAGAATGAGATAAAGA+AGG | 0.546980 | 3_4:+21785074 | Msa0494140:CDS |
| GTCTATCCGATGCAGAGAGA+GGG | 0.554884 | 3_4:-21784630 | None:intergenic |
| GATACAAAACTAAAGCGAGC+TGG | 0.558283 | 3_4:+21788522 | Msa0494140:CDS |
| CAATCTAACAATGCTTCAGG+TGG | 0.561011 | 3_4:-21790319 | None:intergenic |
| GCGGATGATTCAACTAAACT+AGG | 0.565546 | 3_4:+21790836 | Msa0494140:three_prime_UTR |
| GTTGCTGGCATTTACAAAGA+GGG | 0.568033 | 3_4:+21789703 | Msa0494140:CDS |
| GCAGCAGCATTGTGAAGCGA+TGG | 0.573322 | 3_4:+21784664 | Msa0494140:CDS |
| TTGAATCTATCAGTAAGTGT+TGG | 0.576824 | 3_4:+21790406 | Msa0494140:CDS |
| TGGTAGATTCCAGGAAACAC+TGG | 0.577588 | 3_4:+21788118 | Msa0494140:intron |
| GTTGAGGGATTTCAGTCTCA+GGG | 0.582015 | 3_4:-21784705 | None:intergenic |
| CGGTTTGACCACTTCAATCG+TGG | 0.585514 | 3_4:-21790814 | None:intergenic |
| GAACTGGCGAGTTCGTTGGT+CGG | 0.592055 | 3_4:+21790749 | Msa0494140:three_prime_UTR |
| ACACTCCCCTCTCTCTGCAT+CGG | 0.592865 | 3_4:+21784624 | Msa0494140:CDS |
| GGTTGCTGGCATTTACAAAG+AGG | 0.596965 | 3_4:+21789702 | Msa0494140:CDS |
| AATGGAGGGAAAAGGTGAGG+TGG | 0.597678 | 3_4:-21784801 | None:intergenic |
| GGAAATGGAGGGAAAAGGTG+AGG | 0.599010 | 3_4:-21784804 | None:intergenic |
| CGTCTATCCGATGCAGAGAG+AGG | 0.603888 | 3_4:-21784631 | None:intergenic |
| TGGGGAGGAGAGGAAATGGA+GGG | 0.609912 | 3_4:-21784815 | None:intergenic |
| ATTCAACTAGTTGAACTGGC+CGG | 0.611579 | 3_4:-21790723 | None:intergenic |
| TTGCTGGCATTTACAAAGAG+GGG | 0.612817 | 3_4:+21789704 | Msa0494140:CDS |
| AGAGAGGGGAGTGTTCCACT+TGG | 0.613174 | 3_4:-21784615 | None:intergenic |
| GTATCGATACATGTTTCTGA+AGG | 0.615847 | 3_4:-21790481 | None:intergenic |
| TGTTGGACTACACTTAGTTG+GGG | 0.616424 | 3_4:+21788171 | Msa0494140:CDS |
| TTTGCCACATGGTGTTGGAG+AGG | 0.620773 | 3_4:+21785104 | Msa0494140:CDS |
| TCAGCCATTAGGATATAAGG+TGG | 0.622589 | 3_4:+21788497 | Msa0494140:intron |
| TGCAAAACTGAACCATTTGG+TGG | 0.624579 | 3_4:+21790340 | Msa0494140:CDS |
| CAAAACATTATGAGGAGACA+AGG | 0.624768 | 3_4:-21790923 | None:intergenic |
| GGAGACAAGGTCATTTATGA+GGG | 0.626522 | 3_4:-21790910 | None:intergenic |
| AACACAAAATTGCAGATACG+TGG | 0.626986 | 3_4:+21789529 | Msa0494140:intron |
| GTAGTGAGAGAAGAGGAAAG+GGG | 0.629450 | 3_4:-21784845 | None:intergenic |
| ATGACCTGAAACCTGATCAA+GGG | 0.629828 | 3_4:+21790617 | Msa0494140:three_prime_UTR |
| TCTATCCGATGCAGAGAGAG+GGG | 0.645001 | 3_4:-21784629 | None:intergenic |
| AAAACTGAACCATTTGGTGG+TGG | 0.653381 | 3_4:+21790343 | Msa0494140:CDS |
| GGTTTGTACCACGATTGAAG+TGG | 0.657466 | 3_4:+21790806 | Msa0494140:three_prime_UTR |
| ATCCCCTCTCCAACACCATG+TGG | 0.662675 | 3_4:-21785108 | None:intergenic |
| AACATGTATCGATACTGAGG+AGG | 0.667022 | 3_4:+21790489 | Msa0494140:CDS |
| AGAAACATGTATCGATACTG+AGG | 0.671735 | 3_4:+21790486 | Msa0494140:CDS |
| TAGTTTAGTTGAATCATCCG+CGG | 0.680304 | 3_4:-21790834 | None:intergenic |
| TGGAACTATCAAGATCCCAA+TGG | 0.684890 | 3_4:+21790363 | Msa0494140:CDS |
| TCAATTAAGAGAAAACCCAA+GGG | 0.697057 | 3_4:-21790583 | None:intergenic |
| AAGGAAGGTAGTTTGCCACA+TGG | 0.704326 | 3_4:+21785093 | Msa0494140:CDS |
| ATATGCTTCCAAGTTCCAAG+TGG | 0.715527 | 3_4:+21784600 | None:intergenic |
| CGATTGAAGTGGTCAAACCG+CGG | 0.746429 | 3_4:+21790817 | Msa0494140:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAACTTTATAAAATTAA+AGG | + | chr3_4:21785962-21785981 | Msa0494140:intron | 10.0% |
| !!! | CTAATAATTATATTTTTTGT+TGG | + | chr3_4:21787375-21787394 | Msa0494140:intron | 10.0% |
| !!! | AGTTTTTTTATGAATATTAT+CGG | + | chr3_4:21787542-21787561 | Msa0494140:intron | 10.0% |
| !!! | TTTTATAATGAATAAAGAAT+TGG | - | chr3_4:21789870-21789889 | None:intergenic | 10.0% |
| !!! | ATTTTTTCTTTTTTTACTTT+AGG | + | chr3_4:21789992-21790011 | Msa0494140:intron | 10.0% |
| !!! | TTTTTTTTGAAAACTTTGTA+TGG | + | chr3_4:21784923-21784942 | Msa0494140:intron | 15.0% |
| !! | TAATTAAAACAACAAAATCA+AGG | - | chr3_4:21784991-21785010 | None:intergenic | 15.0% |
| !!! | TTGTTTTGTTTTTGTTTAAA+TGG | + | chr3_4:21785021-21785040 | Msa0494140:intron | 15.0% |
| !! | ATAGTTATTCGTATATATTT+CGG | - | chr3_4:21785218-21785237 | None:intergenic | 15.0% |
| !!! | ATTTTATGACTATTTCAAAA+AGG | + | chr3_4:21785354-21785373 | Msa0494140:intron | 15.0% |
| !! | AGTAAAATTTAACAAAGTTA+GGG | - | chr3_4:21785381-21785400 | None:intergenic | 15.0% |
| !!! | TTGTAATTTTTATATACTCA+GGG | - | chr3_4:21785649-21785668 | None:intergenic | 15.0% |
| !!! | TTTGTAATTTTTATATACTC+AGG | - | chr3_4:21785650-21785669 | None:intergenic | 15.0% |
| !!! | TAAAGAGTAAATATTCATTT+TGG | - | chr3_4:21785893-21785912 | None:intergenic | 15.0% |
| !!! | ACATCTTATAATGTATATTT+TGG | + | chr3_4:21786058-21786077 | Msa0494140:intron | 15.0% |
| !!! | TTTTGTATTTTTAGAACTAT+TGG | + | chr3_4:21786193-21786212 | Msa0494140:intron | 15.0% |
| !!! | TTTGTATTTTTAGAACTATT+GGG | + | chr3_4:21786194-21786213 | Msa0494140:intron | 15.0% |
| !! | GAAAACTAAAATAAACATAA+GGG | - | chr3_4:21787058-21787077 | None:intergenic | 15.0% |
| !! | TGAAAACTAAAATAAACATA+AGG | - | chr3_4:21787057-21787076 | None:intergenic | 15.0% |
| !! | GAAAACTAAAATAAACATAA+GGG | - | chr3_4:21787058-21787077 | None:intergenic | 15.0% |
| !! | TGAAAACTAAAATAAACATA+AGG | - | chr3_4:21787057-21787076 | None:intergenic | 15.0% |
| !! | GAAAACTAAAATAAACATAA+GGG | - | chr3_4:21787058-21787077 | None:intergenic | 15.0% |
| !! | TGAAAACTAAAATAAACATA+AGG | - | chr3_4:21787057-21787076 | None:intergenic | 15.0% |
| !! | TGAAAACTAAAATAAACATA+GGG | - | chr3_4:21787057-21787076 | None:intergenic | 15.0% |
| !! | TTGAAAACTAAAATAAACAT+AGG | - | chr3_4:21787056-21787075 | None:intergenic | 15.0% |
| !! | TGAAAACTAAAATAAACATA+AGG | + | chr3_4:21787057-21787076 | Msa0494140:intron | 15.0% |
| !! | GAAAACTAAAATAAACATAA+GGG | + | chr3_4:21787058-21787077 | Msa0494140:intron | 15.0% |
| !! | TGAAAACTAAAATAAACATA+AGG | + | chr3_4:21787057-21787076 | Msa0494140:intron | 15.0% |
| !! | GAAAACTAAAATAAACATAA+GGG | + | chr3_4:21787058-21787077 | Msa0494140:intron | 15.0% |
| !! | TGAAAACTAAAATAAACATA+AGG | + | chr3_4:21787057-21787076 | Msa0494140:intron | 15.0% |
| !! | GAAAACTAAAATAAACATAA+GGG | + | chr3_4:21787058-21787077 | Msa0494140:intron | 15.0% |
| !!! | AAAACTGTATATATTTTTTG+AGG | + | chr3_4:21787856-21787875 | Msa0494140:intron | 15.0% |
| !! | TGCTATTATTAACATATATT+AGG | - | chr3_4:21788862-21788881 | None:intergenic | 15.0% |
| !! | ATATGTTAATAATAGCAATT+TGG | + | chr3_4:21788865-21788884 | Msa0494140:intron | 15.0% |
| !! | TTAATGAAAACAAATATAAC+AGG | - | chr3_4:21789511-21789530 | None:intergenic | 15.0% |
| !! | ATTACTTAATATGTGTTAAA+CGG | + | chr3_4:21790156-21790175 | Msa0494140:intron | 15.0% |
| !! | CATATATTCAAGTATTCAAA+TGG | - | chr3_4:21785241-21785260 | None:intergenic | 20.0% |
| !! | CAGTAAAATTTAACAAAGTT+AGG | - | chr3_4:21785382-21785401 | None:intergenic | 20.0% |
| !!! | ATAGTGACTTGTTAAAATAT+AGG | + | chr3_4:21785472-21785491 | Msa0494140:intron | 20.0% |
| !!! | TAGTGACTTGTTAAAATATA+GGG | + | chr3_4:21785473-21785492 | Msa0494140:intron | 20.0% |
| !!! | TTAACTTAATTGATAGTAAG+TGG | + | chr3_4:21785498-21785517 | Msa0494140:intron | 20.0% |
| !! | ATAGTAAGTGGTTAAATATA+GGG | + | chr3_4:21785510-21785529 | Msa0494140:intron | 20.0% |
| !! | AGATTATGAATATTTCGAAA+AGG | - | chr3_4:21785566-21785585 | None:intergenic | 20.0% |
| !! | TTCGAAATATTCATAATCTT+AGG | + | chr3_4:21785567-21785586 | Msa0494140:intron | 20.0% |
| !! | TCGAAATATTCATAATCTTA+GGG | + | chr3_4:21785568-21785587 | Msa0494140:intron | 20.0% |
| !!! | TGTAATTTTTATATACTCAG+GGG | - | chr3_4:21785648-21785667 | None:intergenic | 20.0% |
| !! | TTGTCTTATGTTAGTTAATT+TGG | + | chr3_4:21785742-21785761 | Msa0494140:intron | 20.0% |
| !!! | AATTTAGTCTTTGAAATTGT+AGG | + | chr3_4:21786311-21786330 | Msa0494140:intron | 20.0% |
| !! | TAATTATTATATTGAGAGAG+CGG | + | chr3_4:21786655-21786674 | Msa0494140:intron | 20.0% |
| !!! | GTTTATTTTAGTTTTCAAGT+TGG | + | chr3_4:21786830-21786849 | Msa0494140:intron | 20.0% |
| !! | TTGAAACTTTCAAAACATAA+GGG | - | chr3_4:21786857-21786876 | None:intergenic | 20.0% |
| !! | GAAAACTAAAATAAACGTAT+GGG | - | chr3_4:21786886-21786905 | None:intergenic | 20.0% |
| !! | TGAAAACTAAAATAAACGTA+TGG | - | chr3_4:21786887-21786906 | None:intergenic | 20.0% |
| !!! | GTTTATTTTAGTTTTCAAGT+TGG | + | chr3_4:21786830-21786849 | Msa0494140:intron | 20.0% |
| !!! | GTTTATTTTAGTTTTCAAGT+TGG | + | chr3_4:21786830-21786849 | Msa0494140:intron | 20.0% |
| !!! | GTTTATTTTAGTTTTCAAGT+TGG | + | chr3_4:21786830-21786849 | Msa0494140:intron | 20.0% |
| !! | GAAAACTAAAATAAACATAG+GGG | - | chr3_4:21787008-21787027 | None:intergenic | 20.0% |
| !!! | GTTTATTTTAGTTTTCAAGT+TGG | + | chr3_4:21786830-21786849 | Msa0494140:intron | 20.0% |
| !!! | GTTTATTTTAGTTTTCAAGT+CGG | - | chr3_4:21786830-21786849 | None:intergenic | 20.0% |
| !!! | GTTTATTTTAGTTTTCAAGT+TGG | - | chr3_4:21786830-21786849 | None:intergenic | 20.0% |
| !!! | TTGAAAACTTTTAAAACGTA+AGG | + | chr3_4:21787147-21787166 | Msa0494140:intron | 20.0% |
| !!! | TGAAAACTTTTAAAACGTAA+GGG | + | chr3_4:21787148-21787167 | Msa0494140:intron | 20.0% |
| !!! | GTTTATTTTAGTTTTCAAGT+TGG | - | chr3_4:21786830-21786849 | None:intergenic | 20.0% |
| !!! | AAGATTTTAGATTATCTGTT+GGG | - | chr3_4:21787275-21787294 | None:intergenic | 20.0% |
| !!! | TCATAATATTGGTTATTCTT+TGG | - | chr3_4:21787816-21787835 | None:intergenic | 20.0% |
| !! | TTTGATATTTATGTTGTTCT+TGG | + | chr3_4:21788098-21788117 | Msa0494140:intron | 20.0% |
| !! | TTGTATTTAATAGTGTATAG+TGG | + | chr3_4:21788369-21788388 | Msa0494140:intron | 20.0% |
| !! | TAGATGTACTAAATTTGAAA+AGG | - | chr3_4:21789425-21789444 | None:intergenic | 20.0% |
| !! | AACTTTGATACAATACTTAT+AGG | + | chr3_4:21789944-21789963 | Msa0494140:intron | 20.0% |
| !!! | TTTTGATAGACCATTAATTA+TGG | + | chr3_4:21790221-21790240 | Msa0494140:intron | 20.0% |
| !!! | TTAATTACTGAAGACATTTT+TGG | + | chr3_4:21790517-21790536 | Msa0494140:CDS | 20.0% |
| !!! | TATTTTAGGAGAGTTAATTT+GGG | + | chr3_4:21790648-21790667 | Msa0494140:three_prime_UTR | 20.0% |
| !!! | TGTTTAAATGGTGTTATAGA+TGG | + | chr3_4:21785033-21785052 | Msa0494140:intron | 25.0% |
| ! | ATTATAGAATGTTATACCTG+AGG | - | chr3_4:21785180-21785199 | None:intergenic | 25.0% |
| ! | TTAACAAGTCACTATCAATT+TGG | - | chr3_4:21785467-21785486 | None:intergenic | 25.0% |
| ! | GATAGTAAGTGGTTAAATAT+AGG | + | chr3_4:21785509-21785528 | Msa0494140:intron | 25.0% |
| ! | TGTCTTCTGTTATTAATTCA+TGG | - | chr3_4:21785800-21785819 | None:intergenic | 25.0% |
| !!! | GTATATTTTGGTAGTTTGTT+TGG | + | chr3_4:21786070-21786089 | Msa0494140:intron | 25.0% |
| !!! | TACAGTTTTAGAGACTAAAT+TGG | + | chr3_4:21786396-21786415 | Msa0494140:intron | 25.0% |
| !!! | ACAATTTTGATTCTTGGTTA+AGG | + | chr3_4:21786594-21786613 | Msa0494140:intron | 25.0% |
| ! | CTTGAAACTTTCAAAACATA+AGG | - | chr3_4:21786858-21786877 | None:intergenic | 25.0% |
| !!! | ATGTTTTGAAAGTTTCAAGT+TGG | + | chr3_4:21786859-21786878 | Msa0494140:intron | 25.0% |
| ! | TTGAAACTTTCAAAACGTAA+GGG | - | chr3_4:21787118-21787137 | None:intergenic | 25.0% |
| ! | TTGAAACTTTCAAAACGTAA+GGG | + | chr3_4:21787118-21787137 | Msa0494140:intron | 25.0% |
| !!! | CGTTTTAAAAGTTTTCAAGT+TGG | - | chr3_4:21787145-21787164 | None:intergenic | 25.0% |
| ! | TTGAAACTTTCAAAACGTAA+GGG | + | chr3_4:21787118-21787137 | Msa0494140:intron | 25.0% |
| !!! | ATCAAGTTGCATATTTTCTT+GGG | - | chr3_4:21787252-21787271 | None:intergenic | 25.0% |
| !! | GAAGATTTTAGATTATCTGT+TGG | - | chr3_4:21787276-21787295 | None:intergenic | 25.0% |
| ! | TGTGAATGTATACATTCTTA+AGG | + | chr3_4:21787399-21787418 | Msa0494140:intron | 25.0% |
| !! | AAGTTGTCATATTGATTAAC+TGG | + | chr3_4:21787422-21787441 | Msa0494140:intron | 25.0% |
| !! | AGTTGTCATATTGATTAACT+GGG | + | chr3_4:21787423-21787442 | Msa0494140:intron | 25.0% |
| ! | TTTATGAATATTATCGGAGT+TGG | + | chr3_4:21787548-21787567 | Msa0494140:intron | 25.0% |
| ! | CTGTATTAAAATTGAGTACA+AGG | + | chr3_4:21787882-21787901 | Msa0494140:intron | 25.0% |
| ! | AAGAACGAAATAAGTAAAAG+TGG | + | chr3_4:21787921-21787940 | Msa0494140:intron | 25.0% |
| ! | AGAACGAAATAAGTAAAAGT+GGG | + | chr3_4:21787922-21787941 | Msa0494140:intron | 25.0% |
| ! | AAAGTAAATTTACAGTACAG+GGG | - | chr3_4:21788027-21788046 | None:intergenic | 25.0% |
| ! | CAAAGTAAATTTACAGTACA+GGG | - | chr3_4:21788028-21788047 | None:intergenic | 25.0% |
| ! | TAAAATCTCTCAATTACCAA+AGG | + | chr3_4:21788071-21788090 | Msa0494140:intron | 25.0% |
| ! | AAAATCTCTCAATTACCAAA+GGG | + | chr3_4:21788072-21788091 | Msa0494140:intron | 25.0% |
| ! | ATAAATATCAAAGAACCCTT+TGG | - | chr3_4:21788090-21788109 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+TGG | - | chr3_4:21788354-21788373 | None:intergenic | 25.0% |
| ! | ATATGATATATCCAAGGATA+CGG | - | chr3_4:21788561-21788580 | None:intergenic | 25.0% |
| ! | AAGCATATATGATATATCCA+AGG | - | chr3_4:21788567-21788586 | None:intergenic | 25.0% |
| !! | TGTTGTTCAGTTTGATTTAA+CGG | - | chr3_4:21788708-21788727 | None:intergenic | 25.0% |
| ! | TGAAAAAAATTGAACTGTGA+TGG | + | chr3_4:21788729-21788748 | Msa0494140:intron | 25.0% |
| ! | GAAAAAAATTGAACTGTGAT+GGG | + | chr3_4:21788730-21788749 | Msa0494140:intron | 25.0% |
| !!! | TAGTTTTTGTTTTTTTTGCC+AGG | + | chr3_4:21788801-21788820 | Msa0494140:intron | 25.0% |
| !! | GACATTTCAGTTTTCTATAA+AGG | + | chr3_4:21788927-21788946 | Msa0494140:intron | 25.0% |
| ! | AAAATTATTAATGCGAGTAC+AGG | + | chr3_4:21789098-21789117 | Msa0494140:intron | 25.0% |
| ! | AAACAATTTCTCTTTACACA+CGG | + | chr3_4:21789202-21789221 | Msa0494140:intron | 25.0% |
| ! | AGATGAAACAATATTAGATC+AGG | - | chr3_4:21789457-21789476 | None:intergenic | 25.0% |
| ! | TTGTTAAAATTCACGATTCT+TGG | + | chr3_4:21789552-21789571 | Msa0494140:CDS | 25.0% |
| ! | TGTTAAAATTCACGATTCTT+GGG | + | chr3_4:21789553-21789572 | Msa0494140:CDS | 25.0% |
| !! | ATTCTAGGAACTTAACATTT+AGG | - | chr3_4:21789619-21789638 | None:intergenic | 25.0% |
| ! | AGAGAAATGCTATCATTAAA+GGG | - | chr3_4:21789780-21789799 | None:intergenic | 25.0% |
| ! | TAGAGAAATGCTATCATTAA+AGG | - | chr3_4:21789781-21789800 | None:intergenic | 25.0% |
| ! | TTCAGAAGAAAATAAAGTCT+TGG | - | chr3_4:21789847-21789866 | None:intergenic | 25.0% |
| ! | TCAAACCAAACAAATTCTTA+TGG | + | chr3_4:21789893-21789912 | Msa0494140:intron | 25.0% |
| !! | ATCATCCATAAGAATTTGTT+TGG | - | chr3_4:21789901-21789920 | None:intergenic | 25.0% |
| ! | TGATACAATACTTATAGGAA+TGG | + | chr3_4:21789949-21789968 | Msa0494140:intron | 25.0% |
| !! | TATTTCAAAATTGTTGGTGA+TGG | + | chr3_4:21790030-21790049 | Msa0494140:intron | 25.0% |
| ! | TTTCCATATATTGTTTGCAA+CGG | - | chr3_4:21790112-21790131 | None:intergenic | 25.0% |
| ! | TACAAAGGAACCATAATTAA+TGG | - | chr3_4:21790234-21790253 | None:intergenic | 25.0% |
| ! | CAAATTAACTCTCCTAAAAT+AGG | - | chr3_4:21790649-21790668 | None:intergenic | 25.0% |
| !!! | CTATTTTAGGAGAGTTAATT+TGG | + | chr3_4:21790647-21790666 | Msa0494140:three_prime_UTR | 25.0% |
| GTTTGGATCGAAAATGAAAA+GGG | - | chr3_4:21784751-21784770 | None:intergenic | 30.0% | |
| AGTTTGGATCGAAAATGAAA+AGG | - | chr3_4:21784752-21784771 | None:intergenic | 30.0% | |
| CGTATATATTTCGGTAAATC+TGG | - | chr3_4:21785209-21785228 | None:intergenic | 30.0% | |
| TACAAAGTCACAGACTAATT+TGG | - | chr3_4:21785311-21785330 | None:intergenic | 30.0% | |
| AGAATATGCTAAAGACTGAA+TGG | + | chr3_4:21785417-21785436 | Msa0494140:intron | 30.0% | |
| ATAGTAGGTGGATAAACTTA+GGG | + | chr3_4:21785440-21785459 | Msa0494140:intron | 30.0% | |
| CTGACACTTTATTAGAGTTA+CGG | + | chr3_4:21785539-21785558 | Msa0494140:intron | 30.0% | |
| ACTAGCAAAAGACAAATTCA+TGG | - | chr3_4:21785678-21785697 | None:intergenic | 30.0% | |
| ! | AAGTATGTCGTTTGTTAGTT+TGG | + | chr3_4:21785711-21785730 | Msa0494140:intron | 30.0% |
| TGACTGTGATTCACATATAA+AGG | + | chr3_4:21786225-21786244 | Msa0494140:intron | 30.0% | |
| GACTGTGATTCACATATAAA+GGG | + | chr3_4:21786226-21786245 | Msa0494140:intron | 30.0% | |
| AGCAGTTGTATGATAAATCA+TGG | + | chr3_4:21786439-21786458 | Msa0494140:intron | 30.0% | |
| TGATAAATCATGGAATTGCA+AGG | + | chr3_4:21786449-21786468 | Msa0494140:intron | 30.0% | |
| ! | ATGGAATTGCAAGGTTATTT+TGG | + | chr3_4:21786458-21786477 | Msa0494140:intron | 30.0% |
| TAGAAATCATAATCCTCTCA+TGG | + | chr3_4:21786542-21786561 | Msa0494140:intron | 30.0% | |
| AGAAATCATAATCCTCTCAT+GGG | + | chr3_4:21786543-21786562 | Msa0494140:intron | 30.0% | |
| !!! | CAGAAGACAATTTTGATTCT+TGG | + | chr3_4:21786588-21786607 | Msa0494140:intron | 30.0% |
| TTTGATTCTTGGTTAAGGAT+TGG | + | chr3_4:21786599-21786618 | Msa0494140:intron | 30.0% | |
| TTGATTCTTGGTTAAGGATT+GGG | + | chr3_4:21786600-21786619 | Msa0494140:intron | 30.0% | |
| AATAGGCTTAATTGCATGTT+TGG | + | chr3_4:21786799-21786818 | Msa0494140:intron | 30.0% | |
| CTTGAAACTTTCAAAACGTA+AGG | - | chr3_4:21787117-21787136 | None:intergenic | 30.0% | |
| !!! | ACGTTTTGAAAGTTTCAAGT+TGG | - | chr3_4:21786919-21786938 | None:intergenic | 30.0% |
| CTTGAAACTTTCAAAACGTA+AGG | + | chr3_4:21787117-21787136 | Msa0494140:intron | 30.0% | |
| !!! | ACGTTTTGAAAGTTTCAAGT+TGG | - | chr3_4:21786919-21786938 | None:intergenic | 30.0% |
| CTTGAAACTTTCAAAACGTA+AGG | + | chr3_4:21787117-21787136 | Msa0494140:intron | 30.0% | |
| !! | GATCAAGTTGCATATTTTCT+TGG | - | chr3_4:21787253-21787272 | None:intergenic | 30.0% |
| ! | GTTGTCATATTGATTAACTG+GGG | + | chr3_4:21787424-21787443 | Msa0494140:intron | 30.0% |
| GAGAAAATAATCTCTTCTCT+TGG | - | chr3_4:21787668-21787687 | None:intergenic | 30.0% | |
| GAACGAAATAAGTAAAAGTG+GGG | + | chr3_4:21787923-21787942 | Msa0494140:intron | 30.0% | |
| CCAAAGTAAATTTACAGTAC+AGG | - | chr3_4:21788029-21788048 | None:intergenic | 30.0% | |
| CCTGTACTGTAAATTTACTT+TGG | + | chr3_4:21788026-21788045 | Msa0494140:intron | 30.0% | |
| ! | ACTTTGGTGTACATATTCTT+AGG | + | chr3_4:21788042-21788061 | Msa0494140:intron | 30.0% |
| GAAAAGATAGAGGAATACAA+AGG | - | chr3_4:21788479-21788498 | None:intergenic | 30.0% | |
| ! | TTTTCAGCCATTAGGATATA+AGG | + | chr3_4:21788494-21788513 | Msa0494140:intron | 30.0% |
| ! | AAAAACTTTTCTACCATGCA+GGG | + | chr3_4:21788636-21788655 | Msa0494140:intron | 30.0% |
| !! | TTTAACGGATCGTAAGTTTT+TGG | - | chr3_4:21788693-21788712 | None:intergenic | 30.0% |
| ! | TTTTTGCCAGGCTTAATATT+CGG | + | chr3_4:21788813-21788832 | Msa0494140:intron | 30.0% |
| TCGTTCACAAAGAATTAGTT+TGG | + | chr3_4:21788894-21788913 | Msa0494140:intron | 30.0% | |
| ! | AGAATTAGTTTGGTTCGAAA+AGG | + | chr3_4:21788904-21788923 | Msa0494140:intron | 30.0% |
| ! | GAATTAGTTTGGTTCGAAAA+GGG | + | chr3_4:21788905-21788924 | Msa0494140:intron | 30.0% |
| ATAAAGGACTAAAGTAGTTC+CGG | + | chr3_4:21788943-21788962 | Msa0494140:intron | 30.0% | |
| ! | GTTTTACTGAACTGTTGTAA+TGG | + | chr3_4:21789023-21789042 | Msa0494140:intron | 30.0% |
| AATTGTTTACTTGTTCCGAT+TGG | - | chr3_4:21789190-21789209 | None:intergenic | 30.0% | |
| AGGTAGTTAATAGCATCAAA+AGG | - | chr3_4:21789253-21789272 | None:intergenic | 30.0% | |
| !!! | TCGTGATTATTTTTTGCAAC+AGG | + | chr3_4:21789583-21789602 | Msa0494140:CDS | 30.0% |
| ATAATTACGACGAAGATTCT+AGG | - | chr3_4:21789634-21789653 | None:intergenic | 30.0% | |
| TAAATGACATCATAAGAGAC+AGG | - | chr3_4:21789823-21789842 | None:intergenic | 30.0% | |
| TGATCCAACAATATTGCAAT+AGG | + | chr3_4:21789917-21789936 | Msa0494140:intron | 30.0% | |
| ! | TCACGCTATTTCAAAATTGT+TGG | + | chr3_4:21790024-21790043 | Msa0494140:intron | 30.0% |
| !! | AAACTTAGATATGGTGCTAT+AGG | - | chr3_4:21790086-21790105 | None:intergenic | 30.0% |
| CAACGGATAAAACTTAGATA+TGG | - | chr3_4:21790095-21790114 | None:intergenic | 30.0% | |
| TATCCGTTGCAAACAATATA+TGG | + | chr3_4:21790106-21790125 | Msa0494140:intron | 30.0% | |
| TTCCAAAACAAGGCAATATA+AGG | + | chr3_4:21790194-21790213 | Msa0494140:intron | 30.0% | |
| !!! | TTCCTTATATTGCCTTGTTT+TGG | - | chr3_4:21790199-21790218 | None:intergenic | 30.0% |
| ! | AAAGGCGATTATCTTTTGTT+TGG | + | chr3_4:21790277-21790296 | Msa0494140:CDS | 30.0% |
| TGACATATGTTTCAACCATT+GGG | - | chr3_4:21790381-21790400 | None:intergenic | 30.0% | |
| TTGAATCTATCAGTAAGTGT+TGG | + | chr3_4:21790406-21790425 | Msa0494140:CDS | 30.0% | |
| TCAATTAAGAGAAAACCCAA+GGG | - | chr3_4:21790586-21790605 | None:intergenic | 30.0% | |
| ATCAATTAAGAGAAAACCCA+AGG | - | chr3_4:21790587-21790606 | None:intergenic | 30.0% | |
| TTGACGAAAAAGAGAGAGTT+TGG | - | chr3_4:21784768-21784787 | None:intergenic | 35.0% | |
| TGCTGAGAATGAGATAAAGA+AGG | + | chr3_4:21785074-21785093 | Msa0494140:CDS | 35.0% | |
| GAGAATGAGATAAAGAAGGA+AGG | + | chr3_4:21785078-21785097 | Msa0494140:CDS | 35.0% | |
| AAAGTCACAGACTAATTTGG+TGG | - | chr3_4:21785308-21785327 | None:intergenic | 35.0% | |
| CTAAAGACTGAATGGATAGT+AGG | + | chr3_4:21785425-21785444 | Msa0494140:intron | 35.0% | |
| GATAGTAGGTGGATAAACTT+AGG | + | chr3_4:21785439-21785458 | Msa0494140:intron | 35.0% | |
| ! | CGTAACTCTAATAAAGTGTC+AGG | - | chr3_4:21785541-21785560 | None:intergenic | 35.0% |
| TTTGTATGGCACTCTCAAAT+AGG | - | chr3_4:21785595-21785614 | None:intergenic | 35.0% | |
| !! | AATTAGTCGCTGACTTTGTA+TGG | - | chr3_4:21785609-21785628 | None:intergenic | 35.0% |
| TACAAAGTCAGCGACTAATT+TGG | + | chr3_4:21785609-21785628 | Msa0494140:intron | 35.0% | |
| ! | GAATTTGTCTTTTGCTAGTC+AGG | + | chr3_4:21785679-21785698 | Msa0494140:intron | 35.0% |
| AATAACAGAAGACACACTCA+AGG | + | chr3_4:21785806-21785825 | Msa0494140:intron | 35.0% | |
| ! | ATGCACTGATGAAGTAAAGT+AGG | + | chr3_4:21785929-21785948 | Msa0494140:intron | 35.0% |
| ! | TGCACTGATGAAGTAAAGTA+GGG | + | chr3_4:21785930-21785949 | Msa0494140:intron | 35.0% |
| ATTTGTCTTTGAACGTGAGA+CGG | + | chr3_4:21785998-21786017 | Msa0494140:intron | 35.0% | |
| TATGTCTTTCGCTAGTAGTT+TGG | + | chr3_4:21786100-21786119 | Msa0494140:intron | 35.0% | |
| TGGTCTTCGAATATGTTTGT+AGG | + | chr3_4:21786120-21786139 | Msa0494140:intron | 35.0% | |
| GTCTTCTGTTAGAAATCTCA+AGG | - | chr3_4:21786159-21786178 | None:intergenic | 35.0% | |
| TTCTAACAGAAGACACTCTT+TGG | + | chr3_4:21786165-21786184 | Msa0494140:intron | 35.0% | |
| CTAATAAACTAGACTCCTTG+AGG | + | chr3_4:21786756-21786775 | Msa0494140:intron | 35.0% | |
| GAATCACGACACAAGAAAAT+AGG | + | chr3_4:21786782-21786801 | Msa0494140:intron | 35.0% | |
| CAGTGTTAAGTTTGTGCTAT+AGG | + | chr3_4:21787461-21787480 | Msa0494140:intron | 35.0% | |
| AAGTTTGTGCTATAGGATTG+TGG | + | chr3_4:21787468-21787487 | Msa0494140:intron | 35.0% | |
| ! | TAACCTAGTTCTTACCTCTT+TGG | + | chr3_4:21787603-21787622 | Msa0494140:intron | 35.0% |
| TAACCAAAGAGGTAAGAACT+AGG | - | chr3_4:21787609-21787628 | None:intergenic | 35.0% | |
| AACTCCTTAATGCGCTAAAA+AGG | + | chr3_4:21787781-21787800 | Msa0494140:intron | 35.0% | |
| !! | AAGTCCTTTTTAGCGCATTA+AGG | - | chr3_4:21787788-21787807 | None:intergenic | 35.0% |
| TCATCCACCTTATATCCTAA+TGG | - | chr3_4:21788504-21788523 | None:intergenic | 35.0% | |
| ! | GAAAAACTTTTCTACCATGC+AGG | + | chr3_4:21788635-21788654 | Msa0494140:intron | 35.0% |
| !!! | TCGTGAAGTTTGGTTCTTTT+CGG | + | chr3_4:21788753-21788772 | Msa0494140:intron | 35.0% |
| TACAAACCGAATATTAAGCC+TGG | - | chr3_4:21788822-21788841 | None:intergenic | 35.0% | |
| TTCAGTAAAACCGAACTGAA+CGG | - | chr3_4:21789014-21789033 | None:intergenic | 35.0% | |
| ACTGAACTGTTGTAATGGTT+CGG | + | chr3_4:21789028-21789047 | Msa0494140:intron | 35.0% | |
| ! | TGACACTAACCCTTTTACAA+TGG | + | chr3_4:21789121-21789140 | Msa0494140:intron | 35.0% |
| ! | GACACTAACCCTTTTACAAT+GGG | + | chr3_4:21789122-21789141 | Msa0494140:intron | 35.0% |
| AACTTCGTCCCATTGTAAAA+GGG | - | chr3_4:21789133-21789152 | None:intergenic | 35.0% | |
| TAACTTCGTCCCATTGTAAA+AGG | - | chr3_4:21789134-21789153 | None:intergenic | 35.0% | |
| ! | AAGCTTTGTATACAAGCTAG+AGG | + | chr3_4:21789155-21789174 | Msa0494140:intron | 35.0% |
| TAGAGGATAATTGAGCCAAT+CGG | + | chr3_4:21789172-21789191 | Msa0494140:intron | 35.0% | |
| !! | TAGCATCAAAAGGAGTACTT+AGG | - | chr3_4:21789243-21789262 | None:intergenic | 35.0% |
| CTAGTAGACTGTTCGTTAAT+GGG | - | chr3_4:21789295-21789314 | None:intergenic | 35.0% | |
| ACTAGTAGACTGTTCGTTAA+TGG | - | chr3_4:21789296-21789315 | None:intergenic | 35.0% | |
| ATAAACCACGATAGACAGAT+AGG | - | chr3_4:21789326-21789345 | None:intergenic | 35.0% | |
| AACACAAAATTGCAGATACG+TGG | + | chr3_4:21789529-21789548 | Msa0494140:intron | 35.0% | |
| AAAATTCACGATTCTTGGGA+AGG | + | chr3_4:21789557-21789576 | Msa0494140:CDS | 35.0% | |
| CTGTACTTGTCTCCATTATT+TGG | + | chr3_4:21789661-21789680 | Msa0494140:intron | 35.0% | |
| TTGTCTCCATTATTTGGTAC+AGG | + | chr3_4:21789667-21789686 | Msa0494140:intron | 35.0% | |
| TCGTCCTATTGCAATATTGT+TGG | - | chr3_4:21789924-21789943 | None:intergenic | 35.0% | |
| ! | CTCTCTTTTCTTCCAAAACA+AGG | + | chr3_4:21790184-21790203 | Msa0494140:intron | 35.0% |
| AAAAGTCCTGCAACATACAA+AGG | - | chr3_4:21790249-21790268 | None:intergenic | 35.0% | |
| ! | CAGGACTTTTCATACAGAAA+AGG | + | chr3_4:21790259-21790278 | Msa0494140:intron | 35.0% |
| TTGCAATCTAACAATGCTTC+AGG | - | chr3_4:21790325-21790344 | None:intergenic | 35.0% | |
| GATTGCAAAACTGAACCATT+TGG | + | chr3_4:21790337-21790356 | Msa0494140:CDS | 35.0% | |
| CTGACATATGTTTCAACCAT+TGG | - | chr3_4:21790382-21790401 | None:intergenic | 35.0% | |
| CAATGGTTGAAACATATGTC+AGG | + | chr3_4:21790380-21790399 | Msa0494140:CDS | 35.0% | |
| ! | GTATCGATACATGTTTCTGA+AGG | - | chr3_4:21790484-21790503 | None:intergenic | 35.0% |
| ! | AGAAACATGTATCGATACTG+AGG | + | chr3_4:21790486-21790505 | Msa0494140:CDS | 35.0% |
| AATACAGAGAACATTCCCTT+GGG | + | chr3_4:21790568-21790587 | Msa0494140:three_prime_UTR | 35.0% | |
| !! | TTTTAAAAACTCGACCGAAC+CGG | + | chr3_4:21790704-21790723 | Msa0494140:three_prime_UTR | 35.0% |
| CCAGTTCAACTAGTTGAATT+GGG | + | chr3_4:21790727-21790746 | Msa0494140:three_prime_UTR | 35.0% | |
| ATCATGTTTACACTTCAGTC+TGG | + | chr3_4:21790776-21790795 | Msa0494140:three_prime_UTR | 35.0% | |
| TAGTTTAGTTGAATCATCCG+CGG | - | chr3_4:21790837-21790856 | None:intergenic | 35.0% | |
| ! | ATTACTGGTAGTGAGAGAAG+AGG | - | chr3_4:21784855-21784874 | None:intergenic | 40.0% |
| GGTCACATGTTCAATTCTTC+CGG | - | chr3_4:21784970-21784989 | None:intergenic | 40.0% | |
| AGGAAGGAACTATAGTGACA+TGG | - | chr3_4:21785270-21785289 | None:intergenic | 40.0% | |
| ATGTCACTATAGTTCCTTCC+TGG | + | chr3_4:21785269-21785288 | Msa0494140:intron | 40.0% | |
| TGTCACTATAGTTCCTTCCT+GGG | + | chr3_4:21785270-21785289 | Msa0494140:intron | 40.0% | |
| ! | TTTGTAGAGCGCTCTCAAAT+AGG | + | chr3_4:21785325-21785344 | Msa0494140:intron | 40.0% |
| AAGACTGAATGGATAGTAGG+TGG | + | chr3_4:21785428-21785447 | Msa0494140:intron | 40.0% | |
| AAAGTCAGCGACTAATTTGG+TGG | + | chr3_4:21785612-21785631 | Msa0494140:intron | 40.0% | |
| ! | TTGTCTTTTGCTAGTCAGGT+TGG | + | chr3_4:21785683-21785702 | Msa0494140:intron | 40.0% |
| TGATATCGTCTCGCACATTT+AGG | + | chr3_4:21785865-21785884 | Msa0494140:intron | 40.0% | |
| ! | GCACTGATGAAGTAAAGTAG+GGG | + | chr3_4:21785931-21785950 | Msa0494140:intron | 40.0% |
| TGATGAAGTAAAGTAGGGGT+AGG | + | chr3_4:21785935-21785954 | Msa0494140:intron | 40.0% | |
| TACTAGCGAAAGACATATCG+AGG | - | chr3_4:21786097-21786116 | None:intergenic | 40.0% | |
| CACATATAAAGGGACTGTGA+TGG | + | chr3_4:21786236-21786255 | Msa0494140:intron | 40.0% | |
| !!! | CAAGTTGGTCCCTTATGTTT+TGG | + | chr3_4:21786845-21786864 | Msa0494140:intron | 40.0% |
| CAAGTCGGTCCAAAACATAA+GGG | - | chr3_4:21787039-21787058 | None:intergenic | 40.0% | |
| TCAAGTCGGTCCAAAACATA+AGG | - | chr3_4:21787040-21787059 | None:intergenic | 40.0% | |
| CTTGGGCTTAATTGCATGTT+TGG | - | chr3_4:21787235-21787254 | None:intergenic | 40.0% | |
| TGTGCTATAGGATTGTGGTA+TGG | + | chr3_4:21787473-21787492 | Msa0494140:intron | 40.0% | |
| ! | TTTTTGCACATGACAGGTCA+TGG | - | chr3_4:21787502-21787521 | None:intergenic | 40.0% |
| ! | AGAAGGTTTTTGCACATGAC+AGG | - | chr3_4:21787508-21787527 | None:intergenic | 40.0% |
| ACTCAAATCTGAGAGCAAGA+AGG | - | chr3_4:21787525-21787544 | None:intergenic | 40.0% | |
| ! | CAACAGAGTTCTAACCAAAG+AGG | - | chr3_4:21787620-21787639 | None:intergenic | 40.0% |
| TGTTGTTCTTGGTAGATTCC+AGG | + | chr3_4:21788109-21788128 | Msa0494140:intron | 40.0% | |
| CTGTTGGACTACACTTAGTT+GGG | + | chr3_4:21788170-21788189 | Msa0494140:CDS | 40.0% | |
| TGTTGGACTACACTTAGTTG+GGG | + | chr3_4:21788171-21788190 | Msa0494140:CDS | 40.0% | |
| GTTACGCAACACTGCTATAA+CGG | + | chr3_4:21788323-21788342 | Msa0494140:intron | 40.0% | |
| CACAATAGCGTAGCAGAATT+CGG | - | chr3_4:21788411-21788430 | None:intergenic | 40.0% | |
| ! | TTCGCAGTGTTGTTAAATCG+CGG | - | chr3_4:21788443-21788462 | None:intergenic | 40.0% |
| CCTAATGGCTGAAAAGATAG+AGG | - | chr3_4:21788489-21788508 | None:intergenic | 40.0% | |
| ! | CCTCTATCTTTTCAGCCATT+AGG | + | chr3_4:21788486-21788505 | Msa0494140:intron | 40.0% |
| TCAGCCATTAGGATATAAGG+TGG | + | chr3_4:21788497-21788516 | Msa0494140:intron | 40.0% | |
| GATACAAAACTAAAGCGAGC+TGG | + | chr3_4:21788522-21788541 | Msa0494140:CDS | 40.0% | |
| AAAACTAAAGCGAGCTGGAT+TGG | + | chr3_4:21788527-21788546 | Msa0494140:CDS | 40.0% | |
| AATTCTAGTACTACCCTGCA+TGG | - | chr3_4:21788652-21788671 | None:intergenic | 40.0% | |
| AAAGTAGTTCCGGTTAGGAT+CGG | + | chr3_4:21788953-21788972 | Msa0494140:intron | 40.0% | |
| TGTGTTATACCCGTTCAGTT+CGG | + | chr3_4:21789001-21789020 | Msa0494140:intron | 40.0% | |
| TCAGTAAAACCGAACTGAAC+GGG | - | chr3_4:21789013-21789032 | None:intergenic | 40.0% | |
| !! | TCAAAAGGAGTACTTAGGTC+TGG | - | chr3_4:21789238-21789257 | None:intergenic | 40.0% |
| TAGACTGTTCGTTAATGGGA+AGG | - | chr3_4:21789291-21789310 | None:intergenic | 40.0% | |
| CACGATAGACAGATAGGTAA+TGG | - | chr3_4:21789320-21789339 | None:intergenic | 40.0% | |
| CATTACCTATCTGTCTATCG+TGG | + | chr3_4:21789318-21789337 | Msa0494140:intron | 40.0% | |
| ! | TCAAGATTTAGAGTACGCGT+AGG | - | chr3_4:21789381-21789400 | None:intergenic | 40.0% |
| CTCCATTATTTGGTACAGGA+AGG | + | chr3_4:21789671-21789690 | Msa0494140:intron | 40.0% | |
| CACCTTCCTGTACCAAATAA+TGG | - | chr3_4:21789676-21789695 | None:intergenic | 40.0% | |
| GTTGCTGGCATTTACAAAGA+GGG | + | chr3_4:21789703-21789722 | Msa0494140:CDS | 40.0% | |
| TTGCTGGCATTTACAAAGAG+GGG | + | chr3_4:21789704-21789723 | Msa0494140:CDS | 40.0% | |
| GAGGGGAACAAAAATTCACT+CGG | + | chr3_4:21789721-21789740 | Msa0494140:CDS | 40.0% | |
| ATGGTTCCTTTGTATGTTGC+AGG | + | chr3_4:21790240-21790259 | Msa0494140:intron | 40.0% | |
| !! | TTGTTTGGTGCTGAAACTAC+TGG | + | chr3_4:21790292-21790311 | Msa0494140:CDS | 40.0% |
| CAATCTAACAATGCTTCAGG+TGG | - | chr3_4:21790322-21790341 | None:intergenic | 40.0% | |
| TGCAAAACTGAACCATTTGG+TGG | + | chr3_4:21790340-21790359 | Msa0494140:CDS | 40.0% | |
| ! | AAAACTGAACCATTTGGTGG+TGG | + | chr3_4:21790343-21790362 | Msa0494140:CDS | 40.0% |
| ! | TTGATAGTTCCACCACCAAA+TGG | - | chr3_4:21790355-21790374 | None:intergenic | 40.0% |
| TGGAACTATCAAGATCCCAA+TGG | + | chr3_4:21790363-21790382 | Msa0494140:CDS | 40.0% | |
| ! | AACATGTATCGATACTGAGG+AGG | + | chr3_4:21790489-21790508 | Msa0494140:CDS | 40.0% |
| CAATACAGAGAACATTCCCT+TGG | + | chr3_4:21790567-21790586 | Msa0494140:three_prime_UTR | 40.0% | |
| ATGACCTGAAACCTGATCAA+GGG | + | chr3_4:21790617-21790636 | Msa0494140:three_prime_UTR | 40.0% | |
| !! | CAAGGGCATAGTCCTATTTT+AGG | + | chr3_4:21790634-21790653 | Msa0494140:three_prime_UTR | 40.0% |
| ATTCAACTAGTTGAACTGGC+CGG | - | chr3_4:21790726-21790745 | None:intergenic | 40.0% | |
| GCCAGTTCAACTAGTTGAAT+TGG | + | chr3_4:21790726-21790745 | Msa0494140:three_prime_UTR | 40.0% | |
| CCCAATTCAACTAGTTGAAC+TGG | - | chr3_4:21790730-21790749 | None:intergenic | 40.0% | |
| CAACTAGTTGAATTGGGAAC+TGG | + | chr3_4:21790733-21790752 | Msa0494140:three_prime_UTR | 40.0% | |
| GCGGATGATTCAACTAAACT+AGG | + | chr3_4:21790836-21790855 | Msa0494140:three_prime_UTR | 40.0% | |
| CAACTAAACTAGGCGTTTGT+TGG | + | chr3_4:21790846-21790865 | Msa0494140:three_prime_UTR | 40.0% | |
| GGAGACAAGGTCATTTATGA+GGG | - | chr3_4:21790913-21790932 | None:intergenic | 40.0% | |
| AGGAGACAAGGTCATTTATG+AGG | - | chr3_4:21790914-21790933 | None:intergenic | 40.0% | |
| GTTGAGGGATTTCAGTCTCA+GGG | - | chr3_4:21784708-21784727 | None:intergenic | 45.0% | |
| GTAGTGAGAGAAGAGGAAAG+GGG | - | chr3_4:21784848-21784867 | None:intergenic | 45.0% | |
| GGTAGTGAGAGAAGAGGAAA+GGG | - | chr3_4:21784849-21784868 | None:intergenic | 45.0% | |
| ! | TGGTAGTGAGAGAAGAGGAA+AGG | - | chr3_4:21784850-21784869 | None:intergenic | 45.0% |
| CACATGTTCAATTCTTCCGG+TGG | - | chr3_4:21784967-21784986 | None:intergenic | 45.0% | |
| ! | AAGGAAGGTAGTTTGCCACA+TGG | + | chr3_4:21785093-21785112 | Msa0494140:CDS | 45.0% |
| AGTTGTGCTTGTTTCACCTC+AGG | + | chr3_4:21785161-21785180 | Msa0494140:CDS | 45.0% | |
| TGAAGTAAAGTAGGGGTAGG+TGG | + | chr3_4:21785938-21785957 | Msa0494140:intron | 45.0% | |
| GAAGTAAAGTAGGGGTAGGT+GGG | + | chr3_4:21785939-21785958 | Msa0494140:intron | 45.0% | |
| !! | CATTTTGACACACCCATGAG+AGG | - | chr3_4:21786558-21786577 | None:intergenic | 45.0% |
| TATTGAGAGAGCGGAGAAAG+AGG | + | chr3_4:21786664-21786683 | Msa0494140:intron | 45.0% | |
| ATTGAGAGAGCGGAGAAAGA+GGG | + | chr3_4:21786665-21786684 | Msa0494140:intron | 45.0% | |
| GTGTCGTGATTCTTTCCTCA+AGG | - | chr3_4:21786774-21786793 | None:intergenic | 45.0% | |
| ! | ATCGGAGTTGGTTAAGTAGC+AGG | + | chr3_4:21787560-21787579 | Msa0494140:intron | 45.0% |
| AGCAGGAACTGTATTTGAGC+TGG | + | chr3_4:21787577-21787596 | Msa0494140:intron | 45.0% | |
| AGCGCATTAAGGAGTTCATC+AGG | - | chr3_4:21787777-21787796 | None:intergenic | 45.0% | |
| TGGTAGATTCCAGGAAACAC+TGG | + | chr3_4:21788118-21788137 | Msa0494140:intron | 45.0% | |
| GCTGTTGGACTACACTTAGT+TGG | + | chr3_4:21788169-21788188 | Msa0494140:CDS | 45.0% | |
| GGACTAAAGTAGTTCCGGTT+AGG | + | chr3_4:21788948-21788967 | Msa0494140:intron | 45.0% | |
| TCTGTGTTTCCGATCCTAAC+CGG | - | chr3_4:21788965-21788984 | None:intergenic | 45.0% | |
| TAGGATCGGAAACACAGAAC+AGG | + | chr3_4:21788967-21788986 | Msa0494140:intron | 45.0% | |
| GAACGGGTATAACACAGGTT+TGG | - | chr3_4:21788997-21789016 | None:intergenic | 45.0% | |
| GAACTGAACGGGTATAACAC+AGG | - | chr3_4:21789002-21789021 | None:intergenic | 45.0% | |
| GAGTTCTGCTTGACCCTTAT+TGG | + | chr3_4:21789353-21789372 | Msa0494140:intron | 45.0% | |
| TGGTACAGGAAGGTGAAAAG+AGG | + | chr3_4:21789681-21789700 | Msa0494140:intron | 45.0% | |
| GGTTGCTGGCATTTACAAAG+AGG | + | chr3_4:21789702-21789721 | Msa0494140:CDS | 45.0% | |
| CATGACCTGAAACCTGATCA+AGG | + | chr3_4:21790616-21790635 | Msa0494140:three_prime_UTR | 45.0% | |
| TATGCCCTTGATCAGGTTTC+AGG | - | chr3_4:21790624-21790643 | None:intergenic | 45.0% | |
| ATAGGACTATGCCCTTGATC+AGG | - | chr3_4:21790631-21790650 | None:intergenic | 45.0% | |
| ACACTTCAGTCTGGTTGAAC+TGG | + | chr3_4:21790785-21790804 | Msa0494140:three_prime_UTR | 45.0% | |
| GGTTTGTACCACGATTGAAG+TGG | + | chr3_4:21790806-21790825 | Msa0494140:three_prime_UTR | 45.0% | |
| !!! | AATAATTATTTTCATAATAT+TGG | - | chr3_4:21787827-21787846 | None:intergenic | 5.0% |
| ! | GGAGTGTTCCACTTGGAACT+TGG | - | chr3_4:21784611-21784630 | None:intergenic | 50.0% |
| TCTATCCGATGCAGAGAGAG+GGG | - | chr3_4:21784632-21784651 | None:intergenic | 50.0% | |
| GTCTATCCGATGCAGAGAGA+GGG | - | chr3_4:21784633-21784652 | None:intergenic | 50.0% | |
| CTCTCTCTGCATCGGATAGA+CGG | + | chr3_4:21784632-21784651 | Msa0494140:CDS | 50.0% | |
| GGTTGAGGGATTTCAGTCTC+AGG | - | chr3_4:21784709-21784728 | None:intergenic | 50.0% | |
| ATGGAGGGAAAAGGTGAGGT+GGG | - | chr3_4:21784803-21784822 | None:intergenic | 50.0% | |
| AATGGAGGGAAAAGGTGAGG+TGG | - | chr3_4:21784804-21784823 | None:intergenic | 50.0% | |
| GGAAATGGAGGGAAAAGGTG+AGG | - | chr3_4:21784807-21784826 | None:intergenic | 50.0% | |
| GGAGAGGAAATGGAGGGAAA+AGG | - | chr3_4:21784812-21784831 | None:intergenic | 50.0% | |
| TGAGAGAAGAGGAAAGGGGA+AGG | - | chr3_4:21784844-21784863 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | - | chr3_4:21784882-21784901 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr3_4:21784881-21784900 | None:intergenic | 50.0% | |
| TCTCTCTCTCTCTCTCTCTC+TGG | + | chr3_4:21784882-21784901 | Msa0494140:intron | 50.0% | |
| TAGCCCACAGAAATTGCCAC+CGG | + | chr3_4:21784948-21784967 | Msa0494140:intron | 50.0% | |
| CTTCCGGTGGCAATTTCTGT+GGG | - | chr3_4:21784954-21784973 | None:intergenic | 50.0% | |
| TCTTCCGGTGGCAATTTCTG+TGG | - | chr3_4:21784955-21784974 | None:intergenic | 50.0% | |
| ! | GGTAGTTTGCCACATGGTGT+TGG | + | chr3_4:21785099-21785118 | Msa0494140:CDS | 50.0% |
| ! | TTTGCCACATGGTGTTGGAG+AGG | + | chr3_4:21785104-21785123 | Msa0494140:CDS | 50.0% |
| ! | TTGCCACATGGTGTTGGAGA+GGG | + | chr3_4:21785105-21785124 | Msa0494140:CDS | 50.0% |
| AGTGGGGTTAGAGCAAGTCT+TGG | + | chr3_4:21787939-21787958 | Msa0494140:intron | 50.0% | |
| ACATGTGCAGCATCAGCTGT+TGG | + | chr3_4:21788154-21788173 | Msa0494140:CDS | 50.0% | |
| !! | CTGTGATGGGTCGTGAAGTT+TGG | + | chr3_4:21788743-21788762 | Msa0494140:intron | 50.0% |
| GAAGGTGACTAACTCGATGG+AGG | - | chr3_4:21789273-21789292 | None:intergenic | 50.0% | |
| TGGGAAGGTGACTAACTCGA+TGG | - | chr3_4:21789276-21789295 | None:intergenic | 50.0% | |
| GTACGCGTAGGAGCCAATAA+GGG | - | chr3_4:21789369-21789388 | None:intergenic | 50.0% | |
| AGTACGCGTAGGAGCCAATA+AGG | - | chr3_4:21789370-21789389 | None:intergenic | 50.0% | |
| GGAAGGTGAAAAGAGGTTGC+TGG | + | chr3_4:21789688-21789707 | Msa0494140:intron | 50.0% | |
| ACTAGTTGAACTGGCCGGTT+CGG | - | chr3_4:21790721-21790740 | None:intergenic | 50.0% | |
| CGGTTTGACCACTTCAATCG+TGG | - | chr3_4:21790817-21790836 | None:intergenic | 50.0% | |
| CGATTGAAGTGGTCAAACCG+CGG | + | chr3_4:21790817-21790836 | Msa0494140:three_prime_UTR | 50.0% | |
| !! | AGAGAGGGGAGTGTTCCACT+TGG | - | chr3_4:21784618-21784637 | None:intergenic | 55.0% |
| ACACTCCCCTCTCTCTGCAT+CGG | + | chr3_4:21784624-21784643 | Msa0494140:CDS | 55.0% | |
| CGTCTATCCGATGCAGAGAG+AGG | - | chr3_4:21784634-21784653 | None:intergenic | 55.0% | |
| GCAGCAGCATTGTGAAGCGA+TGG | + | chr3_4:21784664-21784683 | Msa0494140:CDS | 55.0% | |
| AGTCTCAGGGCAGCAGGAAA+TGG | - | chr3_4:21784695-21784714 | None:intergenic | 55.0% | |
| GATTTCAGTCTCAGGGCAGC+AGG | - | chr3_4:21784701-21784720 | None:intergenic | 55.0% | |
| ! | TGCTGCTGCTGCTAGGTTGA+GGG | - | chr3_4:21784723-21784742 | None:intergenic | 55.0% |
| TGGGGAGGAGAGGAAATGGA+GGG | - | chr3_4:21784818-21784837 | None:intergenic | 55.0% | |
| AGAGGAAAGGGGAAGGAGGT+GGG | - | chr3_4:21784837-21784856 | None:intergenic | 55.0% | |
| AAGAGGAAAGGGGAAGGAGG+TGG | - | chr3_4:21784838-21784857 | None:intergenic | 55.0% | |
| GAGAAGAGGAAAGGGGAAGG+AGG | - | chr3_4:21784841-21784860 | None:intergenic | 55.0% | |
| GAGAGAGAGGGAGGGATTAC+TGG | - | chr3_4:21784870-21784889 | None:intergenic | 55.0% | |
| GAGAGAGAGAGAGAGAGGGA+GGG | - | chr3_4:21784878-21784897 | None:intergenic | 55.0% | |
| AGAGAGAGAGAGAGAGAGGG+AGG | - | chr3_4:21784879-21784898 | None:intergenic | 55.0% | |
| ! | TGCCACATGGTGTTGGAGAG+GGG | + | chr3_4:21785106-21785125 | Msa0494140:CDS | 55.0% |
| ATCCCCTCTCCAACACCATG+TGG | - | chr3_4:21785111-21785130 | None:intergenic | 55.0% | |
| GCTTACTCACTCACCCAGGA+AGG | - | chr3_4:21785286-21785305 | None:intergenic | 55.0% | |
| GCAATGCAGCCAGTGTTTCC+TGG | - | chr3_4:21788130-21788149 | None:intergenic | 55.0% | |
| ! | AGCGAGCTGGATTGGACTAC+TGG | + | chr3_4:21788535-21788554 | Msa0494140:CDS | 55.0% |
| TGGACTACTGGCCGTATCCT+TGG | + | chr3_4:21788547-21788566 | Msa0494140:intron | 55.0% | |
| TTGGGAACTGGCGAGTTCGT+TGG | + | chr3_4:21790745-21790764 | Msa0494140:three_prime_UTR | 55.0% | |
| GAACTGGCGAGTTCGTTGGT+CGG | + | chr3_4:21790749-21790768 | Msa0494140:three_prime_UTR | 55.0% | |
| CTGCTGCTGCTGCTAGGTTG+AGG | - | chr3_4:21784724-21784743 | None:intergenic | 60.0% | |
| !! | GGTTTGCTGCTGCTGCTGCT+AGG | - | chr3_4:21784730-21784749 | None:intergenic | 60.0% |
| GTGGGGAGGAGAGGAAATGG+AGG | - | chr3_4:21784819-21784838 | None:intergenic | 60.0% | |
| GAGGTGGGGAGGAGAGGAAA+TGG | - | chr3_4:21784822-21784841 | None:intergenic | 60.0% | |
| GAGGAAAGGGGAAGGAGGTG+GGG | - | chr3_4:21784836-21784855 | None:intergenic | 60.0% | |
| GGTGGCTTACTCACTCACCC+AGG | - | chr3_4:21785290-21785309 | None:intergenic | 60.0% | |
| GAAAGGGGAAGGAGGTGGGG+AGG | - | chr3_4:21784833-21784852 | None:intergenic | 65.0% | |
| GGGAAGGAGGTGGGGAGGAG+AGG | - | chr3_4:21784828-21784847 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 21784602 | 21790944 | 21784602 | ID=Msa0494140;Name=Msa0494140 |
| chr3_4 | mRNA | 21784602 | 21790944 | 21784602 | ID=Msa0494140-mRNA-1;Parent=Msa0494140;Name=Msa0494140-mRNA-1;_AED=0.09;_eAED=0.10;_QI=0|1|0.85|1|1|1|7|401|307 |
| chr3_4 | exon | 21784602 | 21784869 | 21784602 | ID=Msa0494140-mRNA-1:exon:5501;Parent=Msa0494140-mRNA-1 |
| chr3_4 | exon | 21785052 | 21785182 | 21785052 | ID=Msa0494140-mRNA-1:exon:5502;Parent=Msa0494140-mRNA-1 |
| chr3_4 | exon | 21788124 | 21788192 | 21788124 | ID=Msa0494140-mRNA-1:exon:5503;Parent=Msa0494140-mRNA-1 |
| chr3_4 | exon | 21788501 | 21788559 | 21788501 | ID=Msa0494140-mRNA-1:exon:5504;Parent=Msa0494140-mRNA-1 |
| chr3_4 | exon | 21789544 | 21789604 | 21789544 | ID=Msa0494140-mRNA-1:exon:5505;Parent=Msa0494140-mRNA-1 |
| chr3_4 | exon | 21789689 | 21789742 | 21789689 | ID=Msa0494140-mRNA-1:exon:5506;Parent=Msa0494140-mRNA-1 |
| chr3_4 | exon | 21790262 | 21790944 | 21790262 | ID=Msa0494140-mRNA-1:exon:5507;Parent=Msa0494140-mRNA-1 |
| chr3_4 | CDS | 21784602 | 21784869 | 21784602 | ID=Msa0494140-mRNA-1:cds;Parent=Msa0494140-mRNA-1 |
| chr3_4 | CDS | 21785052 | 21785182 | 21785052 | ID=Msa0494140-mRNA-1:cds;Parent=Msa0494140-mRNA-1 |
| chr3_4 | CDS | 21788124 | 21788192 | 21788124 | ID=Msa0494140-mRNA-1:cds;Parent=Msa0494140-mRNA-1 |
| chr3_4 | CDS | 21788501 | 21788559 | 21788501 | ID=Msa0494140-mRNA-1:cds;Parent=Msa0494140-mRNA-1 |
| chr3_4 | CDS | 21789544 | 21789604 | 21789544 | ID=Msa0494140-mRNA-1:cds;Parent=Msa0494140-mRNA-1 |
| chr3_4 | CDS | 21789689 | 21789742 | 21789689 | ID=Msa0494140-mRNA-1:cds;Parent=Msa0494140-mRNA-1 |
| chr3_4 | CDS | 21790262 | 21790543 | 21790262 | ID=Msa0494140-mRNA-1:cds;Parent=Msa0494140-mRNA-1 |
| chr3_4 | three_prime_UTR | 21790544 | 21790944 | 21790544 | ID=Msa0494140-mRNA-1:three_prime_utr;Parent=Msa0494140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
