AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0280120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0280120 MtrunA17_Chr2g0293821 95.823 407 15 2 1 406 1 406 0.0 790
Msa0280120 MtrunA17_Chr1g0201261 30.244 205 134 4 159 357 275 476 1.81e-23 102
Msa0280120 MtrunA17_Chr3g0122171 27.368 190 120 3 161 332 94 283 1.64e-17 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0280120 AT5G30510.1 70.218 413 113 2 3 405 1 413 0.0 598
Msa0280120 AT1G71720.1 33.171 205 128 4 159 357 261 462 1.91e-24 105
Msa0280120 AT3G23700.1 31.667 180 105 4 171 332 97 276 4.81e-22 97.4
Msa0280120 AT1G71720.2 32.500 160 100 3 159 312 261 418 2.98e-17 83.6
Msa0280120 AT5G14580.1 39.806 103 51 3 231 332 660 752 1.31e-11 67.0
Msa0280120 AT3G11964.1 28.758 153 100 4 254 402 1431 1578 5.25e-11 65.5
Msa0280120 AT3G11964.2 28.758 153 100 4 254 402 1455 1602 5.90e-11 65.1

Find 134 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGCTCTTTCTTTGTTAT+TGG 0.111293 2_3:+14469451 None:intergenic
CAGGGCGTCTTTGTTGTTTA+TGG 0.142595 2_3:+14469504 None:intergenic
ATTTAAATGCCTCTATTTAT+AGG 0.153849 2_3:-14465690 Msa0280120:three_prime_UTR
CTTGAGTTTAAGAGATATTC+AGG 0.242101 2_3:-14467866 Msa0280120:CDS
CTGGTTTGGTTTCAGGTTAA+GGG 0.265794 2_3:-14468072 Msa0280120:intron
AGGGCGTCTTTGTTGTTTAT+GGG 0.287159 2_3:+14469505 None:intergenic
AACAACTGACCAGCACAAAA+TGG 0.311514 2_3:-14469562 Msa0280120:CDS
CAGGTTAAGGGCACTGTGTT+TGG 0.314966 2_3:-14468060 Msa0280120:CDS
CGAATACAAGCGTTGGATTA+CGG 0.315930 2_3:+14466663 None:intergenic
CTCAATCATTATCCTTCAGC+TGG 0.327818 2_3:+14465967 None:intergenic
CAAAGGCGCCATATGGCTTT+AGG 0.331805 2_3:+14466954 None:intergenic
TTTCAAGAGCTTCTGTAAAC+TGG 0.350843 2_3:+14469354 None:intergenic
GGATAAGTCTGGCTTGTTCC+TGG 0.356772 2_3:+14467053 None:intergenic
AAAGAGGAATTTGTAATTGT+TGG 0.366149 2_3:-14467916 Msa0280120:CDS
GTCGACATTGGTGGAATTAG+TGG 0.377742 2_3:-14466932 Msa0280120:CDS
AACAAGTTCCTCAACTATAC+AGG 0.378841 2_3:+14465793 None:intergenic
GGCTGAAGTTGAAGGCCTTA+AGG 0.383122 2_3:-14467539 Msa0280120:CDS
TCAACAGACACACTCTGTTT+CGG 0.384643 2_3:+14469631 None:intergenic
CATAGAGCAAGGTGGAATAA+TGG 0.390869 2_3:+14465918 None:intergenic
GCTGAAGTTGAAGGCCTTAA+GGG 0.395706 2_3:-14467538 Msa0280120:CDS
TCCACCTCCACAAACTTTAG+AGG 0.398733 2_3:+14467076 None:intergenic
CTCAGCAGTGACGGGATCTT+AGG 0.401069 2_3:-14466042 Msa0280120:CDS
TCCTCTAAAGTTTGTGGAGG+TGG 0.403941 2_3:-14467077 Msa0280120:CDS
GAAGAAGCAGGCATAGTTCC+TGG 0.411560 2_3:-14467943 Msa0280120:CDS
TTATGGGTTTGTGTTGTTGT+TGG 0.413642 2_3:+14469521 None:intergenic
AGACTTGCCGCCAGAGGGAC+TGG 0.417394 2_3:-14466007 Msa0280120:CDS
AGAAGAGATTATTGAGTTTG+AGG 0.422123 2_3:-14467101 Msa0280120:CDS
ATCCAATTCCTAGTTGTCCT+TGG 0.432048 2_3:+14467002 None:intergenic
CAGATTATTGATGCAAATAA+AGG 0.442156 2_3:-14467571 Msa0280120:CDS
ATCCAAGGACAACTAGGAAT+TGG 0.443348 2_3:-14467004 Msa0280120:CDS
TGTAGGTTCCAACTTCTTTG+TGG 0.443531 2_3:+14466700 None:intergenic
TGAGGTTCCTCTAAAGTTTG+TGG 0.448327 2_3:-14467083 Msa0280120:CDS
TCCTAGTTGTCCTTGGATGC+CGG 0.460240 2_3:+14467009 None:intergenic
CAAAATGGACTCCACTCCTA+TGG 0.463986 2_3:-14469547 Msa0280120:CDS
GGATGCCGGCTACGGCTTTG+CGG 0.464033 2_3:+14467023 None:intergenic
GTGCAAAGCCTAAAGCCATA+TGG 0.465137 2_3:-14466962 Msa0280120:CDS
GGAAAAGCAGATCGAGAGAT+TGG 0.475046 2_3:-14469608 Msa0280120:five_prime_UTR
AGCCACCGCAAAGCCGTAGC+CGG 0.475388 2_3:-14467028 Msa0280120:CDS
CTTTAGGCTTTGCACAGTGC+CGG 0.475744 2_3:+14466970 None:intergenic
AAGGTGGAATAATGGCAAAA+AGG 0.477657 2_3:+14465926 None:intergenic
ATGTCGACAAAGGCGCCATA+TGG 0.479823 2_3:+14466947 None:intergenic
CTACGGCTTTGCGGTGGCTA+AGG 0.480015 2_3:+14467032 None:intergenic
TGGCTCGTGCTGATATGCTT+AGG 0.493754 2_3:-14466309 Msa0280120:CDS
ACCGTTGACATCTGTGAGAA+TGG 0.495475 2_3:+14467508 None:intergenic
AGAATGGAACAAATCCCTTA+AGG 0.501700 2_3:+14467524 None:intergenic
GGCGCCTTTGTCGACATTGG+TGG 0.504154 2_3:-14466941 Msa0280120:CDS
AACAAGCAAATACCTCTGGC+TGG 0.506114 2_3:+14466284 None:intergenic
GTGTTGTTGTTGGTTTCCAT+AGG 0.506195 2_3:+14469531 None:intergenic
AAAGTTTGTGGAGGTGGACC+AGG 0.506690 2_3:-14467071 Msa0280120:CDS
ATATATAAGCCTATAAATAG+AGG 0.509923 2_3:+14465681 None:intergenic
TCAATCATTATCCTTCAGCT+GGG 0.512179 2_3:+14465968 None:intergenic
ATATTCAGGCTGAGCTTGCA+TGG 0.513898 2_3:-14467852 Msa0280120:CDS
CAGCTGAAGGATAATGATTG+AGG 0.515085 2_3:-14465966 Msa0280120:exon
ACAAATTCCTCTTTCACGCC+AGG 0.517325 2_3:+14467925 None:intergenic
CATAGTTCCTGGCGTGAAAG+AGG 0.517603 2_3:-14467932 Msa0280120:CDS
AAGTCTTTCCACAAAGAAGT+TGG 0.524278 2_3:-14466708 Msa0280120:CDS
TTGTCCTTGGATGCCGGCTA+CGG 0.530588 2_3:+14467015 None:intergenic
AGCAGAAGATGCTGTTGTCA+AGG 0.532605 2_3:-14467809 Msa0280120:CDS
AGCTGAAGGATAATGATTGA+GGG 0.533178 2_3:-14465965 Msa0280120:exon
TTTCTTATAGGCGGAGGAGA+TGG 0.533602 2_3:-14466371 Msa0280120:intron
ATAGGAGAAGAAGATAGATA+AGG 0.533866 2_3:+14469670 None:intergenic
TGGCATGGCCATGGCATCCG+TGG 0.535967 2_3:-14469588 Msa0280120:exon
GCAATGGAACATACAATACC+AGG 0.537968 2_3:+14469485 None:intergenic
CTTAGGCATGTAGAAGAAGC+AGG 0.540089 2_3:-14467955 Msa0280120:CDS
TATGGCGCCTTTGTCGACAT+TGG 0.542516 2_3:-14466944 Msa0280120:CDS
AGGCTGAGCTTGCATGGGAA+AGG 0.542586 2_3:-14467846 Msa0280120:CDS
TCACTCAGATCCAGTCCCTC+TGG 0.542917 2_3:+14465997 None:intergenic
AAAGCCGTAGCCGGCATCCA+AGG 0.543780 2_3:-14467019 Msa0280120:CDS
AGATGCTGTTGTCAAGGGTA+AGG 0.545420 2_3:-14467803 Msa0280120:intron
TGAGTCTGAAATTGGAACCA+AGG 0.547889 2_3:-14469321 Msa0280120:intron
AACTCAATAATCTCTTCTCC+CGG 0.548474 2_3:+14467106 None:intergenic
ACCTTCTCGAATACAAGCGT+TGG 0.548772 2_3:+14466656 None:intergenic
AACAAAAGCTCCACTAGTAT+CGG 0.548885 2_3:+14468035 None:intergenic
GATTAACTCTCAGCAGTGAC+GGG 0.550527 2_3:-14466050 Msa0280120:CDS
TTGTTGAGCCACGGATGCCA+TGG 0.552588 2_3:+14469580 None:intergenic
TCGAGAGATTGGCATGGCCA+TGG 0.555119 2_3:-14469597 Msa0280120:exon
GCGGTGGCTAAGGATAAGTC+TGG 0.558220 2_3:+14467042 None:intergenic
GGTGTGGTGGCTGAAGTTGA+AGG 0.562756 2_3:-14467547 Msa0280120:CDS
GTTGTTGGTTTCCATAGGAG+TGG 0.565341 2_3:+14469536 None:intergenic
CTACATGCCTAAGTTTGTAG+AGG 0.566419 2_3:+14467965 None:intergenic
ACGATGTCGTACTGCTCCAA+TGG 0.567312 2_3:-14469399 Msa0280120:CDS
TTAAGTCATGACCGCGAGAG+AGG 0.568064 2_3:-14466737 Msa0280120:CDS
AATAGCGCAAGCAGAAGCCA+TGG 0.569153 2_3:-14466329 Msa0280120:CDS
AAGCATATCAGCACGAGCCA+TGG 0.569475 2_3:+14466312 None:intergenic
GGTCAAAATGAAATTGATGA+TGG 0.574050 2_3:-14467895 Msa0280120:CDS
AAGAAGTTGGAACCTACACC+TGG 0.576278 2_3:-14466695 Msa0280120:CDS
TGACATTACTTCAAAGTCCA+CGG 0.579638 2_3:-14468013 Msa0280120:CDS
GGATTACGGATCATATCTCC+AGG 0.580645 2_3:+14466677 None:intergenic
GCAGAAGATGCTGTTGTCAA+GGG 0.582875 2_3:-14467808 Msa0280120:CDS
GTAAACGAAACACCTTCCAT+TGG 0.585546 2_3:+14469383 None:intergenic
GAAACAGAGTGTGTCTGTTG+AGG 0.586904 2_3:-14469629 Msa0280120:five_prime_UTR
TAATTTGACTGACATGAAGA+AGG 0.587239 2_3:+14466909 None:intergenic
GGTTCAGACTTGCCGCCAGA+GGG 0.588733 2_3:-14466012 Msa0280120:CDS
GGTTCCTCTAAAGTTTGTGG+AGG 0.589105 2_3:-14467080 Msa0280120:CDS
AGGCGAGCCTCTACAAACTT+AGG 0.590454 2_3:-14467972 Msa0280120:CDS
GGCTTACTTGCCGCTACGAG+AGG 0.590952 2_3:-14467992 Msa0280120:CDS
GACGGGATCTTAGGACCACT+TGG 0.593072 2_3:-14466033 Msa0280120:CDS
CGGATCATATCTCCAGGTGT+AGG 0.593928 2_3:+14466683 None:intergenic
GCCGGCATCCAAGGACAACT+AGG 0.598178 2_3:-14467010 Msa0280120:CDS
CAATCATTATCCTTCAGCTG+GGG 0.598240 2_3:+14465969 None:intergenic
ATTGCAACTGTTCTTCAACC+TGG 0.598301 2_3:-14466866 Msa0280120:CDS
GGATTAACTCTCAGCAGTGA+CGG 0.600398 2_3:-14466051 Msa0280120:CDS
TATTCAGGCTGAGCTTGCAT+GGG 0.601092 2_3:-14467851 Msa0280120:CDS
TGCCGGCTACGGCTTTGCGG+TGG 0.601418 2_3:+14467026 None:intergenic
TCAACCTGGTGATACTCTGA+AGG 0.607339 2_3:-14466852 Msa0280120:intron
CATAAACAACAAAGACGCCC+TGG 0.608933 2_3:-14469503 Msa0280120:CDS
TCCATTCTCACAGATGTCAA+CGG 0.609353 2_3:-14467509 Msa0280120:intron
ATTGGCGCTTGTAATTGCAA+TGG 0.609770 2_3:+14469469 None:intergenic
AATCATTATCCTTCAGCTGG+GGG 0.610002 2_3:+14465970 None:intergenic
ACAAGTTCCTCAACTATACA+GGG 0.610192 2_3:+14465794 None:intergenic
TGTCGTACTGCTCCAATGGA+AGG 0.614245 2_3:-14469395 Msa0280120:CDS
GCTGGTCAGTTGTTGAGCCA+CGG 0.615849 2_3:+14469571 None:intergenic
GACTTACACGACCTCTCTCG+CGG 0.618963 2_3:+14466726 None:intergenic
ATTATTGATGCAAATAAAGG+TGG 0.619527 2_3:-14467568 Msa0280120:CDS
TCGTAGCGGCAAGTAAGCCG+TGG 0.619880 2_3:+14467996 None:intergenic
TGGTTCAGACTTGCCGCCAG+AGG 0.622339 2_3:-14466013 Msa0280120:CDS
GGAATTGGATCAGTTGTCAC+CGG 0.623309 2_3:-14466989 Msa0280120:CDS
ACTATTGCCCTGTATAGTTG+AGG 0.626418 2_3:-14465801 Msa0280120:three_prime_UTR
TGCAAATAAAGGTGGTGTGG+TGG 0.633576 2_3:-14467560 Msa0280120:CDS
AATTCCACCAATGTCGACAA+AGG 0.636907 2_3:+14466937 None:intergenic
GTGTTTGGCACCGATACTAG+TGG 0.637091 2_3:-14468045 Msa0280120:CDS
TTTACCTTCAGAGTATCACC+AGG 0.639151 2_3:+14466848 None:intergenic
CTACAACAATACATAGAGCA+AGG 0.642676 2_3:+14465907 None:intergenic
TCCAACGCTTGTATTCGAGA+AGG 0.655139 2_3:-14466657 Msa0280120:intron
GGTGTGAGATATATGAAACG+TGG 0.657196 2_3:+14469691 None:intergenic
TGATGCAAATAAAGGTGGTG+TGG 0.659116 2_3:-14467563 Msa0280120:CDS
TATGCTTAGGTTCCAGCCAG+AGG 0.664471 2_3:-14466296 Msa0280120:intron
GGCGGCAAGTCTGAACCAAG+TGG 0.672418 2_3:+14466018 None:intergenic
CTCAGATCCAGTCCCTCTGG+CGG 0.676022 2_3:+14466000 None:intergenic
TAGAGGCTCGCCTCTCGTAG+CGG 0.684086 2_3:+14467982 None:intergenic
AGCAGATCGAGAGATTGGCA+TGG 0.684669 2_3:-14469603 Msa0280120:exon
TAATGATTGAGGGAATTCAG+AGG 0.705206 2_3:-14465955 Msa0280120:three_prime_UTR
CAATGGAACATACAATACCA+GGG 0.706248 2_3:+14469486 None:intergenic
CAACAATACATAGAGCAAGG+TGG 0.714692 2_3:+14465910 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTAAGTAATTTTATTTTA+TGG + chr2_3:14466758-14466777 None:intergenic 10.0%
!!! TTTTATGTATTTTAACTATT+AGG - chr2_3:14466909-14466928 Msa0280120:CDS 10.0%
!!! TTTTTATGCTATTTTAATTT+TGG + chr2_3:14469174-14469193 None:intergenic 10.0%
!!! TTTTAAGATGAATTTTGATT+TGG - chr2_3:14466092-14466111 Msa0280120:intron 15.0%
!!! TTTAAGATGAATTTTGATTT+GGG - chr2_3:14466093-14466112 Msa0280120:intron 15.0%
!!! CTTTGTATTTTATTGAATTT+TGG - chr2_3:14466140-14466159 Msa0280120:intron 15.0%
!!! TTTTGGATTTTTTTAGTTTA+TGG - chr2_3:14466157-14466176 Msa0280120:intron 15.0%
!!! TGTTTTTTTTTGTAGAATTT+TGG - chr2_3:14466314-14466333 Msa0280120:CDS 15.0%
!!! TGGATTTTTTTAATTTATGA+TGG - chr2_3:14466334-14466353 Msa0280120:CDS 15.0%
!!! TTAATTTATGATGGATAAAA+AGG - chr2_3:14466343-14466362 Msa0280120:CDS 15.0%
!!! TAATTTATGATGGATAAAAA+GGG - chr2_3:14466344-14466363 Msa0280120:CDS 15.0%
!! ATAAACAATATTATACTGTA+AGG + chr2_3:14466526-14466545 None:intergenic 15.0%
!! TTACAGTATAATATTGTTTA+TGG - chr2_3:14466525-14466544 Msa0280120:intron 15.0%
!!! TTTGCAATTTTATATTTTCA+AGG - chr2_3:14467126-14467145 Msa0280120:intron 15.0%
!!! TAAACTTCTAATTTTGATAA+GGG + chr2_3:14468176-14468195 None:intergenic 15.0%
!!! ATACATTGTTAACTTTTAAT+CGG - chr2_3:14468951-14468970 Msa0280120:intron 15.0%
!! ACAAAAGAAAAAATAACATT+AGG + chr2_3:14469481-14469500 None:intergenic 15.0%
!! TGTTGAATTAATAATGTTTG+TGG - chr2_3:14466067-14466086 Msa0280120:intron 20.0%
!!! TTAAGATGAATTTTGATTTG+GGG - chr2_3:14466094-14466113 Msa0280120:intron 20.0%
!!! TTTTTTAGTTTATGGTGAAA+AGG - chr2_3:14466165-14466184 Msa0280120:intron 20.0%
!!! TTTTTAGTTTATGGTGAAAA+GGG - chr2_3:14466166-14466185 Msa0280120:intron 20.0%
!!! AATTTATGATGGATAAAAAG+GGG - chr2_3:14466345-14466364 Msa0280120:CDS 20.0%
!! ATTGTATATGAACAAGAAAA+TGG - chr2_3:14466435-14466454 Msa0280120:intron 20.0%
!! TTGTATATGAACAAGAAAAT+GGG - chr2_3:14466436-14466455 Msa0280120:intron 20.0%
!! TTTCAATTGAATTGAGTATT+TGG - chr2_3:14466480-14466499 Msa0280120:intron 20.0%
!!! ACACATTGTTAGTAATTTTA+TGG + chr2_3:14467107-14467126 None:intergenic 20.0%
!! GCTTGAAAAATAATCATTAA+AGG + chr2_3:14467201-14467220 None:intergenic 20.0%
!! TGAAATAACTATTCATATTG+AGG - chr2_3:14467227-14467246 Msa0280120:intron 20.0%
!!! GTAATTAATCTGAAATAGAT+TGG - chr2_3:14467249-14467268 Msa0280120:intron 20.0%
!!! GATGCAATATATTTTATTTG+TGG - chr2_3:14468011-14468030 Msa0280120:CDS 20.0%
!!! AAACTTCTAATTTTGATAAG+GGG + chr2_3:14468175-14468194 None:intergenic 20.0%
!!! CTAAACTTCTAATTTTGATA+AGG + chr2_3:14468177-14468196 None:intergenic 20.0%
!! ATCTCATTCTTTATATGATT+AGG - chr2_3:14468585-14468604 Msa0280120:intron 20.0%
!! GAAAATAATCAAAGAAAGTT+AGG + chr2_3:14468891-14468910 None:intergenic 20.0%
!! ATTTAAATGCCTCTATTTAT+AGG - chr2_3:14469663-14469682 Msa0280120:five_prime_UTR 20.0%
!! ATATATAAGCCTATAAATAG+AGG + chr2_3:14469675-14469694 None:intergenic 20.0%
!!! TATGATTTTGAGTCTGAAAT+TGG - chr2_3:14466024-14466043 Msa0280120:CDS 25.0%
!!! TTTTAAGATGAATTTTGACG+AGG - chr2_3:14466263-14466282 Msa0280120:intron 25.0%
!!! TTTAAGATGAATTTTGACGA+GGG - chr2_3:14466264-14466283 Msa0280120:intron 25.0%
! GAGATAGTTAAGTTAATTTC+TGG - chr2_3:14466559-14466578 Msa0280120:intron 25.0%
!!! GTGTCTTTTTTTAGTCATTT+TGG - chr2_3:14466671-14466690 Msa0280120:CDS 25.0%
!! TTAAGAGTAAACAGTCATTT+TGG + chr2_3:14466855-14466874 None:intergenic 25.0%
! ACTAACTAAAAACACATTTG+AGG + chr2_3:14467043-14467062 None:intergenic 25.0%
! TAAAGGCTAAACATTCAATT+GGG + chr2_3:14467184-14467203 None:intergenic 25.0%
! TTAAAGGCTAAACATTCAAT+TGG + chr2_3:14467185-14467204 None:intergenic 25.0%
! AAAGAGGAATTTGTAATTGT+TGG - chr2_3:14467437-14467456 Msa0280120:intron 25.0%
! AAAACTGTTCATATCCATTT+AGG - chr2_3:14467704-14467723 Msa0280120:intron 25.0%
! CATATGAGTGAAAAAGAAAT+TGG + chr2_3:14467748-14467767 None:intergenic 25.0%
! CAGATTATTGATGCAAATAA+AGG - chr2_3:14467782-14467801 Msa0280120:intron 25.0%
! ATTATTGATGCAAATAAAGG+TGG - chr2_3:14467785-14467804 Msa0280120:intron 25.0%
! TTGAATCAAAACTTGTCATT+TGG - chr2_3:14467908-14467927 Msa0280120:CDS 25.0%
! TGCGAAGAAAATAGATAAAA+GGG + chr2_3:14468220-14468239 None:intergenic 25.0%
! ATATCGATGAATTGTATTAC+AGG + chr2_3:14468531-14468550 None:intergenic 25.0%
!! AATAACAAAGCTAAGCATTT+TGG + chr2_3:14468857-14468876 None:intergenic 25.0%
!!! TCGGTTGATTTTTTTCTTAT+AGG - chr2_3:14468970-14468989 Msa0280120:intron 25.0%
!!! GTTGATTTTTTTCTTATAGG+CGG - chr2_3:14468973-14468992 Msa0280120:intron 25.0%
! ACTTCAGAGTTAAAAATTGA+AGG - chr2_3:14469624-14469643 Msa0280120:five_prime_UTR 25.0%
ATAGGAGAAGAAGATAGATA+AGG + chr2_3:14465686-14465705 None:intergenic 30.0%
!! GGTTTTCAGTTTTATCAGAT+AGG + chr2_3:14465704-14465723 None:intergenic 30.0%
! CTTTGCTCTTTCTTTGTTAT+TGG + chr2_3:14465905-14465924 None:intergenic 30.0%
CAACAAAAAAAAACTTGCCT+TGG + chr2_3:14466052-14466071 None:intergenic 30.0%
!! TTAAGATGAATTTTGACGAG+GGG - chr2_3:14466265-14466284 Msa0280120:intron 30.0%
! ACATTTTCCTCACAAACATT+AGG + chr2_3:14466409-14466428 None:intergenic 30.0%
TTACTTACAAAAGAGACACT+TGG - chr2_3:14466768-14466787 Msa0280120:intron 30.0%
TACTCTTAATATCTGACCAA+CGG - chr2_3:14466866-14466885 Msa0280120:CDS 30.0%
CTAAAAATAATTTCCACCGT+TGG + chr2_3:14466885-14466904 None:intergenic 30.0%
CACACATTTAGAGAACAAAA+TGG + chr2_3:14466942-14466961 None:intergenic 30.0%
! AACATCCCGAAATATCTTTT+TGG - chr2_3:14467003-14467022 Msa0280120:CDS 30.0%
ACTAGCCAAAAAGATATTTC+GGG + chr2_3:14467011-14467030 None:intergenic 30.0%
! GACTAGCCAAAAAGATATTT+CGG + chr2_3:14467012-14467031 None:intergenic 30.0%
!!! ATCTTTTTGGCTAGTCATTT+TGG - chr2_3:14467016-14467035 Msa0280120:CDS 30.0%
GGTCAAAATGAAATTGATGA+TGG - chr2_3:14467458-14467477 Msa0280120:intron 30.0%
CTTGAGTTTAAGAGATATTC+AGG - chr2_3:14467487-14467506 Msa0280120:intron 30.0%
CTTCTCTTAATTGAGATTAC+TGG + chr2_3:14467663-14467682 None:intergenic 30.0%
AGTGAAAAAGAAATTGGTAG+GGG + chr2_3:14467742-14467761 None:intergenic 30.0%
GAGTGAAAAAGAAATTGGTA+GGG + chr2_3:14467743-14467762 None:intergenic 30.0%
TGAGTGAAAAAGAAATTGGT+AGG + chr2_3:14467744-14467763 None:intergenic 30.0%
! ACTCATATGTGTAATTTGTG+TGG - chr2_3:14467759-14467778 Msa0280120:intron 30.0%
ACGTTCATAAATGTCAAAGT+AGG + chr2_3:14467881-14467900 None:intergenic 30.0%
! TGTCATTTGGCAAGTAAAAA+AGG - chr2_3:14467921-14467940 Msa0280120:CDS 30.0%
!! ATTTGCAATCTTTAGAGCTT+AGG + chr2_3:14467980-14467999 None:intergenic 30.0%
AGTTCCATCATAGATAGTAT+AGG + chr2_3:14468061-14468080 None:intergenic 30.0%
CTGCGAAGAAAATAGATAAA+AGG + chr2_3:14468221-14468240 None:intergenic 30.0%
AGAAGAGATTATTGAGTTTG+AGG - chr2_3:14468252-14468271 Msa0280120:intron 30.0%
TAATTTGACTGACATGAAGA+AGG + chr2_3:14468447-14468466 None:intergenic 30.0%
CGATATTTGAATAGAGTTAC+AGG - chr2_3:14468545-14468564 Msa0280120:intron 30.0%
GAATATCATATCAGTAGTCA+TGG - chr2_3:14468779-14468798 Msa0280120:intron 30.0%
AATTAACAAGCAAATACCTC+TGG + chr2_3:14469076-14469095 None:intergenic 30.0%
!! TTATTGTTTGTTTTCCAGAG+TGG - chr2_3:14469281-14469300 Msa0280120:intron 30.0%
GAATAATGGCAAAAAGGTAA+AGG + chr2_3:14469424-14469443 None:intergenic 30.0%
! TTTTCAATTTTACACTGTCG+AGG + chr2_3:14469522-14469541 None:intergenic 30.0%
! TTATGGGTTTGTGTTGTTGT+TGG + chr2_3:14465835-14465854 None:intergenic 35.0%
CAATGGAACATACAATACCA+GGG + chr2_3:14465870-14465889 None:intergenic 35.0%
TTTCAAGAGCTTCTGTAAAC+TGG + chr2_3:14466002-14466021 None:intergenic 35.0%
!! GTAGAATGGACATGTTTTTG+AGG - chr2_3:14466372-14466391 Msa0280120:intron 35.0%
TGGATTACCTAATGTTTGTG+AGG - chr2_3:14466399-14466418 Msa0280120:intron 35.0%
AATGGGTGATTCTAGTACAT+TGG - chr2_3:14466453-14466472 Msa0280120:intron 35.0%
TTGAATGTGTGTTCTGTTAG+TGG - chr2_3:14466725-14466744 Msa0280120:CDS 35.0%
! GTTACTTTAGTCCTCAAATG+TGG - chr2_3:14467061-14467080 Msa0280120:CDS 35.0%
TGACAACGTCTTACATATTG+AGG - chr2_3:14467156-14467175 Msa0280120:intron 35.0%
GACAACGTCTTACATATTGA+GGG - chr2_3:14467157-14467176 Msa0280120:intron 35.0%
AACAAAAGCTCCACTAGTAT+CGG + chr2_3:14467321-14467340 None:intergenic 35.0%
TGACATTACTTCAAAGTCCA+CGG - chr2_3:14467340-14467359 Msa0280120:intron 35.0%
GGAGAAAATCAACTCCTAAA+TGG + chr2_3:14467721-14467740 None:intergenic 35.0%
AGAATGGAACAAATCCCTTA+AGG + chr2_3:14467832-14467851 None:intergenic 35.0%
! GGCAAGTAAAAAAGGTACAA+TGG - chr2_3:14467929-14467948 Msa0280120:CDS 35.0%
ACAATGGCTATTGAGAGAAA+TGG - chr2_3:14467945-14467964 Msa0280120:CDS 35.0%
TCATAGATAGTATAGGAAGG+TGG + chr2_3:14468054-14468073 None:intergenic 35.0%
CCATCATAGATAGTATAGGA+AGG + chr2_3:14468057-14468076 None:intergenic 35.0%
CCTTCCTATACTATCTATGA+TGG - chr2_3:14468054-14468073 Msa0280120:CDS 35.0%
! ATTTTCTTCGCAGAAAACAC+CGG - chr2_3:14468228-14468247 Msa0280120:intron 35.0%
AACTCAATAATCTCTTCTCC+CGG + chr2_3:14468250-14468269 None:intergenic 35.0%
AAGTCTTTCCACAAAGAAGT+TGG - chr2_3:14468645-14468664 Msa0280120:intron 35.0%
!!! TAAGCATTTTGGCTTCTTGT+AGG + chr2_3:14468846-14468865 None:intergenic 35.0%
!! TGCTATTGAAAGTGTTGAAG+TGG + chr2_3:14468913-14468932 None:intergenic 35.0%
!!! GATTTTTTTCTTATAGGCGG+AGG - chr2_3:14468976-14468995 Msa0280120:intron 35.0%
AAAACTATTCAGCAGTAGAG+TGG + chr2_3:14469199-14469218 None:intergenic 35.0%
TCAATCATTATCCTTCAGCT+GGG + chr2_3:14469388-14469407 None:intergenic 35.0%
AGCTGAAGGATAATGATTGA+GGG - chr2_3:14469388-14469407 Msa0280120:CDS 35.0%
TAATGATTGAGGGAATTCAG+AGG - chr2_3:14469398-14469417 Msa0280120:CDS 35.0%
AAGGTGGAATAATGGCAAAA+AGG + chr2_3:14469430-14469449 None:intergenic 35.0%
CTACAACAATACATAGAGCA+AGG + chr2_3:14469449-14469468 None:intergenic 35.0%
ACAAGTTCCTCAACTATACA+GGG + chr2_3:14469562-14469581 None:intergenic 35.0%
AACAAGTTCCTCAACTATAC+AGG + chr2_3:14469563-14469582 None:intergenic 35.0%
GGTGTGAGATATATGAAACG+TGG + chr2_3:14465665-14465684 None:intergenic 40.0%
TCAACAGACACACTCTGTTT+CGG + chr2_3:14465725-14465744 None:intergenic 40.0%
AACAACTGACCAGCACAAAA+TGG - chr2_3:14465791-14465810 Msa0280120:three_prime_UTR 40.0%
!! GTGTTGTTGTTGGTTTCCAT+AGG + chr2_3:14465825-14465844 None:intergenic 40.0%
!! AGGGCGTCTTTGTTGTTTAT+GGG + chr2_3:14465851-14465870 None:intergenic 40.0%
GCAATGGAACATACAATACC+AGG + chr2_3:14465871-14465890 None:intergenic 40.0%
ATTGGCGCTTGTAATTGCAA+TGG + chr2_3:14465887-14465906 None:intergenic 40.0%
GTAAACGAAACACCTTCCAT+TGG + chr2_3:14465973-14465992 None:intergenic 40.0%
! TGAGTCTGAAATTGGAACCA+AGG - chr2_3:14466032-14466051 Msa0280120:CDS 40.0%
!! TAAAAAGGGGTGCTGTAGAA+TGG - chr2_3:14466358-14466377 Msa0280120:CDS 40.0%
!!! GGACATGTTTTTGAGGTTTG+TGG - chr2_3:14466379-14466398 Msa0280120:intron 40.0%
!! TCTGGAGTGAACAGTCATTT+TGG - chr2_3:14466577-14466596 Msa0280120:intron 40.0%
GACGTTGTCTCACACATATA+AGG + chr2_3:14466604-14466623 None:intergenic 40.0%
!! GTGTGTTCTGTTAGTGGATT+TGG - chr2_3:14466731-14466750 Msa0280120:CDS 40.0%
! TTTTGGTCTCCACATGAATG+AGG + chr2_3:14466838-14466857 None:intergenic 40.0%
TCTTAATATCTGACCAACGG+TGG - chr2_3:14466869-14466888 Msa0280120:CDS 40.0%
TCCTCAAATGTGGATTTCGT+TGG - chr2_3:14467071-14467090 Msa0280120:CDS 40.0%
ACCAACGAAATCCACATTTG+AGG + chr2_3:14467075-14467094 None:intergenic 40.0%
!! CTGGTTTGGTTTCAGGTTAA+GGG - chr2_3:14467281-14467300 Msa0280120:intron 40.0%
CTACATGCCTAAGTTTGTAG+AGG + chr2_3:14467391-14467410 None:intergenic 40.0%
TGATGCAAATAAAGGTGGTG+TGG - chr2_3:14467790-14467809 Msa0280120:intron 40.0%
TCCATTCTCACAGATGTCAA+CGG - chr2_3:14467844-14467863 Msa0280120:CDS 40.0%
!!! GGGAAAGAGTTTTGAGTTGT+TGG + chr2_3:14468200-14468219 None:intergenic 40.0%
! TTTTCTTCGCAGAAAACACC+GGG - chr2_3:14468229-14468248 Msa0280120:intron 40.0%
!! TGAGGTTCCTCTAAAGTTTG+TGG - chr2_3:14468270-14468289 Msa0280120:intron 40.0%
ATCCAAGGACAACTAGGAAT+TGG - chr2_3:14468349-14468368 Msa0280120:intron 40.0%
ATCCAATTCCTAGTTGTCCT+TGG + chr2_3:14468354-14468373 None:intergenic 40.0%
AATTCCACCAATGTCGACAA+AGG + chr2_3:14468419-14468438 None:intergenic 40.0%
ATTGCAACTGTTCTTCAACC+TGG - chr2_3:14468487-14468506 Msa0280120:intron 40.0%
! TTTACCTTCAGAGTATCACC+AGG + chr2_3:14468508-14468527 None:intergenic 40.0%
TGTAGGTTCCAACTTCTTTG+TGG + chr2_3:14468656-14468675 None:intergenic 40.0%
!! CGAATACAAGCGTTGGATTA+CGG + chr2_3:14468693-14468712 None:intergenic 40.0%
! GAAGCAGAAAAAGCATGAAG+TGG + chr2_3:14468812-14468831 None:intergenic 40.0%
AATCATTATCCTTCAGCTGG+GGG + chr2_3:14469386-14469405 None:intergenic 40.0%
CAATCATTATCCTTCAGCTG+GGG + chr2_3:14469387-14469406 None:intergenic 40.0%
CTCAATCATTATCCTTCAGC+TGG + chr2_3:14469389-14469408 None:intergenic 40.0%
CAGCTGAAGGATAATGATTG+AGG - chr2_3:14469387-14469406 Msa0280120:CDS 40.0%
CATAGAGCAAGGTGGAATAA+TGG + chr2_3:14469438-14469457 None:intergenic 40.0%
CAACAATACATAGAGCAAGG+TGG + chr2_3:14469446-14469465 None:intergenic 40.0%
ACTATTGCCCTGTATAGTTG+AGG - chr2_3:14469552-14469571 Msa0280120:CDS 40.0%
GAAACAGAGTGTGTCTGTTG+AGG - chr2_3:14465724-14465743 Msa0280120:three_prime_UTR 45.0%
GGAAAAGCAGATCGAGAGAT+TGG - chr2_3:14465745-14465764 Msa0280120:three_prime_UTR 45.0%
! CAAAATGGACTCCACTCCTA+TGG - chr2_3:14465806-14465825 Msa0280120:three_prime_UTR 45.0%
!! GTTGTTGGTTTCCATAGGAG+TGG + chr2_3:14465820-14465839 None:intergenic 45.0%
!! CAGGGCGTCTTTGTTGTTTA+TGG + chr2_3:14465852-14465871 None:intergenic 45.0%
CATAAACAACAAAGACGCCC+TGG - chr2_3:14465850-14465869 Msa0280120:three_prime_UTR 45.0%
AATAGATTGGCGACTCTTGC+TGG - chr2_3:14467262-14467281 Msa0280120:intron 45.0%
!! ACTCTTGCTGGTTTGGTTTC+AGG - chr2_3:14467274-14467293 Msa0280120:intron 45.0%
!! GCTGGTTTGGTTTCAGGTTA+AGG - chr2_3:14467280-14467299 Msa0280120:intron 45.0%
CTTAGGCATGTAGAAGAAGC+AGG - chr2_3:14467398-14467417 Msa0280120:intron 45.0%
ACAAATTCCTCTTTCACGCC+AGG + chr2_3:14467431-14467450 None:intergenic 45.0%
ATATTCAGGCTGAGCTTGCA+TGG - chr2_3:14467501-14467520 Msa0280120:intron 45.0%
TATTCAGGCTGAGCTTGCAT+GGG - chr2_3:14467502-14467521 Msa0280120:intron 45.0%
AGCAGAAGATGCTGTTGTCA+AGG - chr2_3:14467544-14467563 Msa0280120:CDS 45.0%
GCAGAAGATGCTGTTGTCAA+GGG - chr2_3:14467545-14467564 Msa0280120:CDS 45.0%
AGATGCTGTTGTCAAGGGTA+AGG - chr2_3:14467550-14467569 Msa0280120:CDS 45.0%
TGCAAATAAAGGTGGTGTGG+TGG - chr2_3:14467793-14467812 Msa0280120:intron 45.0%
GCTGAAGTTGAAGGCCTTAA+GGG - chr2_3:14467815-14467834 Msa0280120:CDS 45.0%
ACCGTTGACATCTGTGAGAA+TGG + chr2_3:14467848-14467867 None:intergenic 45.0%
!! GGTTCCTCTAAAGTTTGTGG+AGG - chr2_3:14468273-14468292 Msa0280120:intron 45.0%
!! TCCTCTAAAGTTTGTGGAGG+TGG - chr2_3:14468276-14468295 Msa0280120:intron 45.0%
TCCACCTCCACAAACTTTAG+AGG + chr2_3:14468280-14468299 None:intergenic 45.0%
GGAATTGGATCAGTTGTCAC+CGG - chr2_3:14468364-14468383 Msa0280120:intron 45.0%
GTGCAAAGCCTAAAGCCATA+TGG - chr2_3:14468391-14468410 Msa0280120:intron 45.0%
GTCGACATTGGTGGAATTAG+TGG - chr2_3:14468421-14468440 Msa0280120:intron 45.0%
TCAACCTGGTGATACTCTGA+AGG - chr2_3:14468501-14468520 Msa0280120:intron 45.0%
AAGAAGTTGGAACCTACACC+TGG - chr2_3:14468658-14468677 Msa0280120:intron 45.0%
GGATTACGGATCATATCTCC+AGG + chr2_3:14468679-14468698 None:intergenic 45.0%
TCCAACGCTTGTATTCGAGA+AGG - chr2_3:14468696-14468715 Msa0280120:intron 45.0%
ACCTTCTCGAATACAAGCGT+TGG + chr2_3:14468700-14468719 None:intergenic 45.0%
TTTCTTATAGGCGGAGGAGA+TGG - chr2_3:14468982-14469001 Msa0280120:intron 45.0%
AACAAGCAAATACCTCTGGC+TGG + chr2_3:14469072-14469091 None:intergenic 45.0%
ATGAAACTGAAGCAGCAGCA+AGG - chr2_3:14469122-14469141 Msa0280120:intron 45.0%
TGAAACTGAAGCAGCAGCAA+GGG - chr2_3:14469123-14469142 Msa0280120:intron 45.0%
TGCTGAGAGTTAATCCACTC+TGG + chr2_3:14469298-14469317 None:intergenic 45.0%
GGATTAACTCTCAGCAGTGA+CGG - chr2_3:14469302-14469321 Msa0280120:intron 45.0%
GATTAACTCTCAGCAGTGAC+GGG - chr2_3:14469303-14469322 Msa0280120:intron 45.0%
!!! TTTTAAATTTTAAACATTTA+CGG + chr2_3:14466635-14466654 None:intergenic 5.0%
AGCAGATCGAGAGATTGGCA+TGG - chr2_3:14465750-14465769 Msa0280120:three_prime_UTR 50.0%
! GAGTGGAGTCCATTTTGTGC+TGG + chr2_3:14465803-14465822 None:intergenic 50.0%
ACGATGTCGTACTGCTCCAA+TGG - chr2_3:14465954-14465973 Msa0280120:three_prime_UTR 50.0%
TGTCGTACTGCTCCAATGGA+AGG - chr2_3:14465958-14465977 Msa0280120:exon 50.0%
! ATTGGCGACTCTTGCTGGTT+TGG - chr2_3:14467267-14467286 Msa0280120:intron 50.0%
!! CAGGTTAAGGGCACTGTGTT+TGG - chr2_3:14467293-14467312 Msa0280120:intron 50.0%
!! GTGTTTGGCACCGATACTAG+TGG - chr2_3:14467308-14467327 Msa0280120:intron 50.0%
AGGCGAGCCTCTACAAACTT+AGG - chr2_3:14467381-14467400 Msa0280120:intron 50.0%
GAAGAAGCAGGCATAGTTCC+TGG - chr2_3:14467410-14467429 Msa0280120:intron 50.0%
CATAGTTCCTGGCGTGAAAG+AGG - chr2_3:14467421-14467440 Msa0280120:intron 50.0%
GGCTGAAGTTGAAGGCCTTA+AGG - chr2_3:14467814-14467833 Msa0280120:CDS 50.0%
AAAGTTTGTGGAGGTGGACC+AGG - chr2_3:14468282-14468301 Msa0280120:intron 50.0%
!! GGATAAGTCTGGCTTGTTCC+TGG + chr2_3:14468303-14468322 None:intergenic 50.0%
TCCTAGTTGTCCTTGGATGC+CGG + chr2_3:14468347-14468366 None:intergenic 50.0%
CTTTAGGCTTTGCACAGTGC+CGG + chr2_3:14468386-14468405 None:intergenic 50.0%
!! CAAAGGCGCCATATGGCTTT+AGG + chr2_3:14468402-14468421 None:intergenic 50.0%
!! ATGTCGACAAAGGCGCCATA+TGG + chr2_3:14468409-14468428 None:intergenic 50.0%
TATGGCGCCTTTGTCGACAT+TGG - chr2_3:14468409-14468428 Msa0280120:intron 50.0%
TTAAGTCATGACCGCGAGAG+AGG - chr2_3:14468616-14468635 Msa0280120:intron 50.0%
CGGATCATATCTCCAGGTGT+AGG + chr2_3:14468673-14468692 None:intergenic 50.0%
AATAGCGCAAGCAGAAGCCA+TGG - chr2_3:14469024-14469043 Msa0280120:intron 50.0%
AAGCATATCAGCACGAGCCA+TGG + chr2_3:14469044-14469063 None:intergenic 50.0%
! TGGCTCGTGCTGATATGCTT+AGG - chr2_3:14469044-14469063 Msa0280120:intron 50.0%
TATGCTTAGGTTCCAGCCAG+AGG - chr2_3:14469057-14469076 Msa0280120:intron 50.0%
AAGCAGCAGCAAGGGATCAA+AGG - chr2_3:14469131-14469150 Msa0280120:intron 50.0%
TCGAGAGATTGGCATGGCCA+TGG - chr2_3:14465756-14465775 Msa0280120:three_prime_UTR 55.0%
TTGTTGAGCCACGGATGCCA+TGG + chr2_3:14465776-14465795 None:intergenic 55.0%
GCTGGTCAGTTGTTGAGCCA+CGG + chr2_3:14465785-14465804 None:intergenic 55.0%
!! GTGAGAGCGCCTCATTCATG+TGG - chr2_3:14466826-14466845 Msa0280120:intron 55.0%
AGGCTGAGCTTGCATGGGAA+AGG - chr2_3:14467507-14467526 Msa0280120:intron 55.0%
GGTGTGGTGGCTGAAGTTGA+AGG - chr2_3:14467806-14467825 Msa0280120:CDS 55.0%
GCGGTGGCTAAGGATAAGTC+TGG + chr2_3:14468314-14468333 None:intergenic 55.0%
! TTGTCCTTGGATGCCGGCTA+CGG + chr2_3:14468341-14468360 None:intergenic 55.0%
GACTTACACGACCTCTCTCG+CGG + chr2_3:14468630-14468649 None:intergenic 55.0%
! CTCAGCAGTGACGGGATCTT+AGG - chr2_3:14469311-14469330 Msa0280120:intron 55.0%
GACGGGATCTTAGGACCACT+TGG - chr2_3:14469320-14469339 Msa0280120:intron 55.0%
TCACTCAGATCCAGTCCCTC+TGG + chr2_3:14469359-14469378 None:intergenic 55.0%
AGTGAGATACCCCCAGCTGA+AGG - chr2_3:14469374-14469393 Msa0280120:CDS 55.0%
TCGTAGCGGCAAGTAAGCCG+TGG + chr2_3:14467360-14467379 None:intergenic 60.0%
GGCTTACTTGCCGCTACGAG+AGG - chr2_3:14467361-14467380 Msa0280120:intron 60.0%
TAGAGGCTCGCCTCTCGTAG+CGG + chr2_3:14467374-14467393 None:intergenic 60.0%
CTACGGCTTTGCGGTGGCTA+AGG + chr2_3:14468324-14468343 None:intergenic 60.0%
AAAGCCGTAGCCGGCATCCA+AGG - chr2_3:14468334-14468353 Msa0280120:intron 60.0%
GCCGGCATCCAAGGACAACT+AGG - chr2_3:14468343-14468362 Msa0280120:intron 60.0%
GGCGCCTTTGTCGACATTGG+TGG - chr2_3:14468412-14468431 Msa0280120:intron 60.0%
GGCGGCAAGTCTGAACCAAG+TGG + chr2_3:14469338-14469357 None:intergenic 60.0%
TGGTTCAGACTTGCCGCCAG+AGG - chr2_3:14469340-14469359 Msa0280120:CDS 60.0%
GGTTCAGACTTGCCGCCAGA+GGG - chr2_3:14469341-14469360 Msa0280120:CDS 60.0%
CTCAGATCCAGTCCCTCTGG+CGG + chr2_3:14469356-14469375 None:intergenic 60.0%
TGGCATGGCCATGGCATCCG+TGG - chr2_3:14465765-14465784 Msa0280120:three_prime_UTR 65.0%
AGCCACCGCAAAGCCGTAGC+CGG - chr2_3:14468325-14468344 Msa0280120:intron 65.0%
! GGATGCCGGCTACGGCTTTG+CGG + chr2_3:14468333-14468352 None:intergenic 65.0%
AGACTTGCCGCCAGAGGGAC+TGG - chr2_3:14469346-14469365 Msa0280120:CDS 65.0%
! TGCCGGCTACGGCTTTGCGG+TGG + chr2_3:14468330-14468349 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 14465656 14469719 14465656 ID=Msa0280120;Name=Msa0280120
chr2_3 mRNA 14465656 14469719 14465656 ID=Msa0280120-mRNA-1;Parent=Msa0280120;Name=Msa0280120-mRNA-1;_AED=0.06;_eAED=0.06;_QI=113|1|1|1|1|1|7|319|407
chr2_3 exon 14465656 14466076 14465656 ID=Msa0280120-mRNA-1:exon:6117;Parent=Msa0280120-mRNA-1
chr2_3 exon 14466297 14466383 14466297 ID=Msa0280120-mRNA-1:exon:6116;Parent=Msa0280120-mRNA-1
chr2_3 exon 14466658 14466768 14466658 ID=Msa0280120-mRNA-1:exon:6115;Parent=Msa0280120-mRNA-1
chr2_3 exon 14466853 14467134 14466853 ID=Msa0280120-mRNA-1:exon:6114;Parent=Msa0280120-mRNA-1
chr2_3 exon 14467510 14467590 14467510 ID=Msa0280120-mRNA-1:exon:6113;Parent=Msa0280120-mRNA-1
chr2_3 exon 14467804 14468079 14467804 ID=Msa0280120-mRNA-1:exon:6112;Parent=Msa0280120-mRNA-1
chr2_3 exon 14469322 14469719 14469322 ID=Msa0280120-mRNA-1:exon:6111;Parent=Msa0280120-mRNA-1
chr2_3 five_prime_UTR 14469607 14469719 14469607 ID=Msa0280120-mRNA-1:five_prime_utr;Parent=Msa0280120-mRNA-1
chr2_3 CDS 14469322 14469606 14469322 ID=Msa0280120-mRNA-1:cds;Parent=Msa0280120-mRNA-1
chr2_3 CDS 14467804 14468079 14467804 ID=Msa0280120-mRNA-1:cds;Parent=Msa0280120-mRNA-1
chr2_3 CDS 14467510 14467590 14467510 ID=Msa0280120-mRNA-1:cds;Parent=Msa0280120-mRNA-1
chr2_3 CDS 14466853 14467134 14466853 ID=Msa0280120-mRNA-1:cds;Parent=Msa0280120-mRNA-1
chr2_3 CDS 14466658 14466768 14466658 ID=Msa0280120-mRNA-1:cds;Parent=Msa0280120-mRNA-1
chr2_3 CDS 14466297 14466383 14466297 ID=Msa0280120-mRNA-1:cds;Parent=Msa0280120-mRNA-1
chr2_3 CDS 14465975 14466076 14465975 ID=Msa0280120-mRNA-1:cds;Parent=Msa0280120-mRNA-1
chr2_3 three_prime_UTR 14465656 14465974 14465656 ID=Msa0280120-mRNA-1:three_prime_utr;Parent=Msa0280120-mRNA-1
Gene Sequence

>Msa0280120

ATGGCCATGGCATCCGTGGCTCAACAACTGACCAGCACAAAATGGACTCCACTCCTATGGAAACCAACAACAACACAAACCCATAAACAACAAAGACGCCCTGGTATTGTATGTTCCATTGCAATTACAAGCGCCAATAACAAAGAAAGAGCAAAGCTTAAAGAGCTTTTCGATAATGCTTATGAACGATGTCGTACTGCTCCAATGGAAGGTGTTTCGTTTACTCTTGACCAGTTTACAGAAGCTCTTGAAAAATATGATTTTGAGTCTGAAATTGGAACCAAGGTTAAGGGCACTGTGTTTGGCACCGATACTAGTGGAGCTTTTGTTGACATTACTTCAAAGTCCACGGCTTACTTGCCGCTACGAGAGGCGAGCCTCTACAAACTTAGGCATGTAGAAGAAGCAGGCATAGTTCCTGGCGTGAAAGAGGAATTTGTAATTGTTGGTCAAAATGAAATTGATGATGGTATGATCTTGAGTTTAAGAGATATTCAGGCTGAGCTTGCATGGGAAAGGTGTAGACAACTTCAAGCAGAAGATGCTGTTGTCAAGGGTAAGATTATTGATGCAAATAAAGGTGGTGTGGTGGCTGAAGTTGAAGGCCTTAAGGGATTTGTTCCATTCTCACAGATGTCAACGAAAACACCGGGAGAAGAGATTATTGAGTTTGAGGTTCCTCTAAAGTTTGTGGAGGTGGACCAGGAACAAGCCAGACTTATCCTTAGCCACCGCAAAGCCGTAGCCGGCATCCAAGGACAACTAGGAATTGGATCAGTTGTCACCGGCACTGTGCAAAGCCTAAAGCCATATGGCGCCTTTGTCGACATTGGTGGAATTAGTGGCCTTCTTCATGTCAGTCAAATTAGTCACGATCGTATATCAGATATTGCAACTGTTCTTCAACCTGGTGATACTCTGAAGGTGATGATCTTAAGTCATGACCGCGAGAGAGGTCGTGTAAGTCTTTCCACAAAGAAGTTGGAACCTACACCTGGAGATATGATCCGTAATCCAACGCTTGTATTCGAGAAGGCGGAGGAGATGGCTCAGACATTCAGACAGAGAATAGCGCAAGCAGAAGCCATGGCTCGTGCTGATATGCTTAGGTTCCAGCCAGAGAGTGGATTAACTCTCAGCAGTGACGGGATCTTAGGACCACTTGGTTCAGACTTGCCGCCAGAGGGACTGGATCTGAGTGAGATACCCCCAGCTGAAGGATAA

Protein sequence

>Msa0280120

MAMASVAQQLTSTKWTPLLWKPTTTQTHKQQRRPGIVCSIAITSANNKERAKLKELFDNAYERCRTAPMEGVSFTLDQFTEALEKYDFESEIGTKVKGTVFGTDTSGAFVDITSKSTAYLPLREASLYKLRHVEEAGIVPGVKEEFVIVGQNEIDDGMILSLRDIQAELAWERCRQLQAEDAVVKGKIIDANKGGVVAEVEGLKGFVPFSQMSTKTPGEEIIEFEVPLKFVEVDQEQARLILSHRKAVAGIQGQLGIGSVVTGTVQSLKPYGAFVDIGGISGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSDLPPEGLDLSEIPPAEG*