Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1338200 | XP_013452366.1 | 80.471 | 297 | 10 | 2 | 1 | 249 | 1 | 297 | 1.04e-155 | 444 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1338200 | sp|Q8GXT7|P4H12_ARATH | 37.584 | 298 | 130 | 9 | 1 | 249 | 1 | 291 | 7.00e-51 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1338200 | A0A072U9B5 | 80.471 | 297 | 10 | 2 | 1 | 249 | 1 | 297 | 4.94e-156 | 444 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa1338200 | 0.820232 | 7.647122e-53 | -8.615850e-47 |
| Msa0033980 | Msa1338200 | 0.802541 | 5.342820e-49 | -8.615850e-47 |
| Msa0040450 | Msa1338200 | 0.813165 | 2.938249e-51 | -8.615850e-47 |
| Msa0077610 | Msa1338200 | 0.801936 | 7.116495e-49 | -8.615850e-47 |
| Msa0081930 | Msa1338200 | 0.807414 | 5.114438e-50 | -8.615850e-47 |
| Msa0094120 | Msa1338200 | 0.809772 | 1.603787e-50 | -8.615850e-47 |
| Msa0110970 | Msa1338200 | 0.803719 | 3.047684e-49 | -8.615850e-47 |
| Msa0621590 | Msa1338200 | 0.801626 | 8.237644e-49 | -8.615850e-47 |
| Msa0633840 | Msa1338200 | 0.808133 | 3.596743e-50 | -8.615850e-47 |
| Msa0638070 | Msa1338200 | 0.819324 | 1.232727e-52 | -8.615850e-47 |
| Msa0657970 | Msa1338200 | 0.805408 | 1.354600e-49 | -8.615850e-47 |
| Msa0692230 | Msa1338200 | 0.808428 | 3.112845e-50 | -8.615850e-47 |
| Msa0693380 | Msa1338200 | 0.822806 | 1.944846e-53 | -8.615850e-47 |
| Msa0698770 | Msa1338200 | 0.801925 | 7.153314e-49 | -8.615850e-47 |
| Msa0708520 | Msa1338200 | 0.817266 | 3.605592e-52 | -8.615850e-47 |
| Msa0716840 | Msa1338200 | 0.805262 | 1.453270e-49 | -8.615850e-47 |
| Msa0745790 | Msa1338200 | 0.815261 | 1.012149e-51 | -8.615850e-47 |
| Msa0760380 | Msa1338200 | 0.800243 | 1.578918e-48 | -8.615850e-47 |
| Msa0769920 | Msa1338200 | 0.814047 | 1.879821e-51 | -8.615850e-47 |
| Msa0796530 | Msa1338200 | 0.803170 | 3.961856e-49 | -8.615850e-47 |
| Msa0808270 | Msa1338200 | 0.802509 | 5.424997e-49 | -8.615850e-47 |
| Msa0824660 | Msa1338200 | 0.812031 | 5.201203e-51 | -8.615850e-47 |
| Msa0827040 | Msa1338200 | 0.817221 | 3.689485e-52 | -8.615850e-47 |
| Msa0829620 | Msa1338200 | 0.815155 | 1.068768e-51 | -8.615850e-47 |
| Msa0136070 | Msa1338200 | 0.809486 | 1.847593e-50 | -8.615850e-47 |
| Msa0157290 | Msa1338200 | 0.819900 | 9.109355e-53 | -8.615850e-47 |
| Msa0165220 | Msa1338200 | 0.804662 | 1.939473e-49 | -8.615850e-47 |
| Msa0173990 | Msa1338200 | 0.823910 | 1.073992e-53 | -8.615850e-47 |
| Msa0191250 | Msa1338200 | 0.815434 | 9.262288e-52 | -8.615850e-47 |
| Msa0192510 | Msa1338200 | 0.803930 | 2.755236e-49 | -8.615850e-47 |
| Msa0225740 | Msa1338200 | 0.810408 | 1.170081e-50 | -8.615850e-47 |
| Msa0227400 | Msa1338200 | 0.806021 | 1.007166e-49 | -8.615850e-47 |
| Msa1264020 | Msa1338200 | 0.805725 | 1.162164e-49 | -8.615850e-47 |
| Msa1283860 | Msa1338200 | 0.812422 | 4.272923e-51 | -8.615850e-47 |
| Msa1314100 | Msa1338200 | 0.807461 | 4.998903e-50 | -8.615850e-47 |
| Msa1314170 | Msa1338200 | 0.800018 | 1.754763e-48 | -8.615850e-47 |
| Msa1333410 | Msa1338200 | 0.833213 | 6.068939e-56 | -8.615850e-47 |
| Msa1338200 | Msa1340260 | 0.824043 | 9.994052e-54 | -8.615850e-47 |
| Msa1338200 | Msa1340270 | 0.807663 | 4.529069e-50 | -8.615850e-47 |
| Msa1338200 | Msa1343070 | 0.806586 | 7.655285e-50 | -8.615850e-47 |
| Msa1338200 | Msa1371430 | 0.845624 | 3.615008e-59 | -8.615850e-47 |
| Msa1338200 | Msa1375680 | 0.804640 | 1.960721e-49 | -8.615850e-47 |
| Msa1338200 | Msa1384350 | 0.812314 | 4.511389e-51 | -8.615850e-47 |
| Msa1338200 | Msa1415640 | 0.849401 | 3.311783e-60 | -8.615850e-47 |
| Msa1338200 | Msa1424680 | 0.801233 | 9.918403e-49 | -8.615850e-47 |
| Msa1338200 | Msa1454120 | 0.807419 | 5.102420e-50 | -8.615850e-47 |
| Msa1338200 | Msa1463670 | 0.807868 | 4.095775e-50 | -8.615850e-47 |
| Msa0389340 | Msa1338200 | 0.804614 | 1.984859e-49 | -8.615850e-47 |
| Msa0423040 | Msa1338200 | 0.802300 | 5.990182e-49 | -8.615850e-47 |
| Msa0432770 | Msa1338200 | 0.841433 | 4.766216e-58 | -8.615850e-47 |
| Msa0479170 | Msa1338200 | 0.803682 | 3.103031e-49 | -8.615850e-47 |
| Msa0480000 | Msa1338200 | 0.844515 | 7.208296e-59 | -8.615850e-47 |
| Msa1014540 | Msa1338200 | 0.813809 | 2.121180e-51 | -8.615850e-47 |
| Msa1082500 | Msa1338200 | 0.847378 | 1.200765e-59 | -8.615850e-47 |
| Msa0239800 | Msa1338200 | 0.801639 | 8.190150e-49 | -8.615850e-47 |
| Msa0265380 | Msa1338200 | 0.801707 | 7.929829e-49 | -8.615850e-47 |
| Msa0270100 | Msa1338200 | 0.801755 | 7.752469e-49 | -8.615850e-47 |
| Msa0272690 | Msa1338200 | 0.802278 | 6.053574e-49 | -8.615850e-47 |
| Msa0283520 | Msa1338200 | 0.800242 | 1.580128e-48 | -8.615850e-47 |
| Msa0288100 | Msa1338200 | 0.807299 | 5.409485e-50 | -8.615850e-47 |
| Msa0309770 | Msa1338200 | 0.816954 | 4.236427e-52 | -8.615850e-47 |
| Msa0311860 | Msa1338200 | 0.809581 | 1.763001e-50 | -8.615850e-47 |
| Msa0320100 | Msa1338200 | 0.806632 | 7.486036e-50 | -8.615850e-47 |
| Msa0321860 | Msa1338200 | 0.803922 | 2.766587e-49 | -8.615850e-47 |
| Msa0323080 | Msa1338200 | 0.811827 | 5.760577e-51 | -8.615850e-47 |
| Msa0335040 | Msa1338200 | 0.804363 | 2.238993e-49 | -8.615850e-47 |
| Msa0351030 | Msa1338200 | 0.801976 | 6.984304e-49 | -8.615850e-47 |
| Msa1179460 | Msa1338200 | 0.801634 | 8.206406e-49 | -8.615850e-47 |
| Msa1203250 | Msa1338200 | 0.809428 | 1.901274e-50 | -8.615850e-47 |
| Msa0484780 | Msa1338200 | 0.837175 | 6.070284e-57 | -8.615850e-47 |
| Msa0512390 | Msa1338200 | 0.801425 | 9.059783e-49 | -8.615850e-47 |
| Msa0558690 | Msa1338200 | 0.813680 | 2.264231e-51 | -8.615850e-47 |
| Msa0562440 | Msa1338200 | 0.813411 | 2.595368e-51 | -8.615850e-47 |
| Msa0593650 | Msa1338200 | 0.821291 | 4.364684e-53 | -8.615850e-47 |
| Msa0844240 | Msa1338200 | 0.802964 | 4.369504e-49 | -8.615850e-47 |
| Msa0850960 | Msa1338200 | 0.816152 | 6.407289e-52 | -8.615850e-47 |
| Msa0867890 | Msa1338200 | 0.824124 | 9.564075e-54 | -8.615850e-47 |
| Msa0880140 | Msa1338200 | 0.823261 | 1.523528e-53 | -8.615850e-47 |
| Msa0888800 | Msa1338200 | 0.876647 | 1.182168e-68 | -8.615850e-47 |
| Msa0915530 | Msa1338200 | 0.876812 | 1.036835e-68 | -8.615850e-47 |
| Msa0954550 | Msa1338200 | 0.803130 | 4.037795e-49 | -8.615850e-47 |
| Msa0975220 | Msa1338200 | 0.800147 | 1.651642e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1338200 | MtrunA17_Chr6g0470551 | 80.471 | 297 | 10 | 2 | 1 | 249 | 1 | 297 | 9.52e-160 | 444 |
| Msa1338200 | MtrunA17_Chr4g0066531 | 40.865 | 208 | 80 | 4 | 76 | 249 | 100 | 298 | 3.33e-44 | 150 |
| Msa1338200 | MtrunA17_Chr6g0452281 | 35.714 | 238 | 119 | 5 | 38 | 249 | 82 | 311 | 1.10e-43 | 149 |
| Msa1338200 | MtrunA17_Chr2g0286811 | 35.391 | 243 | 116 | 5 | 38 | 249 | 71 | 303 | 4.87e-40 | 140 |
| Msa1338200 | MtrunA17_Chr3g0143381 | 32.867 | 143 | 69 | 3 | 76 | 191 | 132 | 274 | 5.93e-17 | 78.2 |
| Msa1338200 | MtrunA17_Chr8g0371281 | 29.255 | 188 | 102 | 5 | 33 | 192 | 88 | 272 | 2.43e-16 | 76.3 |
| Msa1338200 | MtrunA17_Chr8g0371241 | 32.540 | 126 | 74 | 4 | 76 | 190 | 31 | 156 | 9.42e-16 | 72.8 |
| Msa1338200 | MtrunA17_Chr8g0371251 | 28.796 | 191 | 99 | 5 | 33 | 192 | 90 | 274 | 1.26e-15 | 74.3 |
| Msa1338200 | MtrunA17_Chr5g0406051 | 30.282 | 142 | 72 | 3 | 76 | 190 | 141 | 282 | 3.08e-15 | 73.6 |
| Msa1338200 | MtrunA17_Chr3g0143361 | 30.216 | 139 | 76 | 2 | 76 | 193 | 32 | 170 | 4.36e-15 | 71.6 |
| Msa1338200 | MtrunA17_Chr1g0213811 | 33.824 | 136 | 65 | 4 | 78 | 190 | 142 | 275 | 5.99e-15 | 72.8 |
| Msa1338200 | MtrunA17_Chr8g0371221 | 31.690 | 142 | 70 | 3 | 76 | 190 | 130 | 271 | 1.56e-14 | 71.2 |
| Msa1338200 | MtrunA17_Chr8g0371231 | 28.169 | 142 | 75 | 3 | 76 | 190 | 55 | 196 | 1.07e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1338200 | AT4G25600.1 | 37.584 | 298 | 130 | 9 | 1 | 249 | 1 | 291 | 7.12e-52 | 171 |
| Msa1338200 | AT4G25600.3 | 42.512 | 207 | 87 | 4 | 68 | 249 | 31 | 230 | 1.32e-50 | 165 |
| Msa1338200 | AT4G25600.4 | 42.512 | 207 | 87 | 4 | 68 | 249 | 28 | 227 | 1.36e-50 | 165 |
| Msa1338200 | AT4G25600.2 | 42.512 | 207 | 87 | 4 | 68 | 249 | 40 | 239 | 1.52e-50 | 166 |
| Msa1338200 | AT3G28490.1 | 39.500 | 200 | 88 | 3 | 76 | 249 | 96 | 288 | 5.88e-46 | 155 |
| Msa1338200 | AT3G28480.1 | 37.500 | 200 | 95 | 3 | 76 | 249 | 119 | 314 | 1.39e-43 | 150 |
| Msa1338200 | AT3G28480.2 | 37.500 | 200 | 95 | 3 | 76 | 249 | 127 | 322 | 2.13e-43 | 149 |
| Msa1338200 | AT3G06300.1 | 38.916 | 203 | 91 | 4 | 76 | 249 | 101 | 299 | 9.19e-42 | 144 |
| Msa1338200 | AT5G18900.1 | 34.167 | 240 | 119 | 5 | 39 | 249 | 69 | 298 | 8.22e-38 | 134 |
| Msa1338200 | AT4G35810.1 | 32.414 | 145 | 71 | 3 | 76 | 193 | 143 | 287 | 2.84e-16 | 77.0 |
| Msa1338200 | AT4G35810.2 | 32.414 | 145 | 71 | 3 | 76 | 193 | 143 | 287 | 2.84e-16 | 77.0 |
| Msa1338200 | AT2G17720.1 | 31.724 | 145 | 72 | 3 | 76 | 193 | 143 | 287 | 8.07e-16 | 75.5 |
| Msa1338200 | AT1G20270.1 | 29.861 | 144 | 74 | 3 | 76 | 192 | 139 | 282 | 3.84e-15 | 73.6 |
| Msa1338200 | AT5G66060.1 | 29.577 | 142 | 73 | 3 | 76 | 190 | 141 | 282 | 1.44e-13 | 69.3 |
| Msa1338200 | AT2G43080.1 | 28.571 | 140 | 79 | 3 | 78 | 196 | 144 | 283 | 2.95e-12 | 65.5 |
Find 63 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGACCACATATCGCCTTTA+AGG | 0.151018 | tig0001724:+15275 | None:intergenic |
| CCTTTACAGGTCATGCATTA+TGG | 0.184280 | tig0001724:-15953 | Msa1338200:CDS |
| TTTCACAAACAAAACCAAAT+TGG | 0.191233 | tig0001724:-15900 | Msa1338200:CDS |
| GCTCGATGCCCTGTCCTTAA+AGG | 0.210672 | tig0001724:-15289 | Msa1338200:CDS |
| TCTTGTCAGGAGATGTATTT+AGG | 0.219035 | tig0001724:+15323 | None:intergenic |
| AGAGAACAGCAAGCCTTTAC+AGG | 0.299865 | tig0001724:-15966 | Msa1338200:CDS |
| CTTTACAGGTCATGCATTAT+GGG | 0.305434 | tig0001724:-15952 | Msa1338200:CDS |
| AGAACTGCATTCCCTTTAAC+TGG | 0.334718 | tig0001724:+15361 | None:intergenic |
| AGAGGAAACTTCATTGGATA+TGG | 0.342638 | tig0001724:-17500 | Msa1338200:CDS |
| TTAACAGCAGGAAAGAATTA+AGG | 0.349909 | tig0001724:-20137 | Msa1338200:intron |
| TTCACAAACAAAACCAAATT+GGG | 0.356049 | tig0001724:-15899 | Msa1338200:CDS |
| AGGTCCGGTTGATCCCAATT+TGG | 0.361801 | tig0001724:+15886 | None:intergenic |
| AAAGAAAGAGGAAACTTCAT+TGG | 0.368859 | tig0001724:-17506 | Msa1338200:CDS |
| GAGGTTCTCCAACCAGTTAA+AGG | 0.393818 | tig0001724:-15373 | Msa1338200:CDS |
| TTGAAGAAAGACTTTCGGTT+TGG | 0.401961 | tig0001724:-16096 | Msa1338200:CDS |
| AAAACCAAATTGGGATCAAC+CGG | 0.420089 | tig0001724:-15890 | Msa1338200:CDS |
| GTTGGATCTCCTGATTACTA+TGG | 0.429222 | tig0001724:-15112 | Msa1338200:CDS |
| CGACAAGTACCATAGTAATC+AGG | 0.442588 | tig0001724:+15103 | None:intergenic |
| TAGAAGCGAGAGGGTGAAGA+AGG | 0.445042 | tig0001724:+20261 | None:intergenic |
| GAGGATTGAAGAAAGACTTT+CGG | 0.449118 | tig0001724:-16101 | Msa1338200:CDS |
| GAAGAAGGTGATGAGGATAA+AGG | 0.452413 | tig0001724:+20276 | None:intergenic |
| GTGAATTAACTGATATTCTC+AGG | 0.462191 | tig0001724:-14981 | Msa1338200:three_prime_UTR |
| TCTCCCGTTGCTGCCCAAGC+TGG | 0.465114 | tig0001724:+15160 | None:intergenic |
| CTGCATTCCCTTTAACTGGT+TGG | 0.472708 | tig0001724:+15365 | None:intergenic |
| AAGAAGGTGTTAGAAGCGAG+AGG | 0.473143 | tig0001724:+20251 | None:intergenic |
| AGATGATAGTTGTCCAGCTT+GGG | 0.474954 | tig0001724:-15173 | Msa1338200:CDS |
| CACTGTTGCCATCAAAGGTC+CGG | 0.475147 | tig0001724:+15871 | None:intergenic |
| TGTCCAGCTTGGGCAGCAAC+GGG | 0.476542 | tig0001724:-15163 | Msa1338200:CDS |
| GCGTGTAAGCTACTCTTGTC+AGG | 0.476850 | tig0001724:+15310 | None:intergenic |
| AGGTTCTCCAACCAGTTAAA+GGG | 0.477047 | tig0001724:-15372 | Msa1338200:CDS |
| CCATAATGCATGACCTGTAA+AGG | 0.487176 | tig0001724:+15953 | None:intergenic |
| AAGATGATAGTTGTCCAGCT+TGG | 0.488359 | tig0001724:-15174 | Msa1338200:CDS |
| CGGAACCCTGTCTACATGGT+TGG | 0.491604 | tig0001724:-15130 | Msa1338200:CDS |
| ATTTGACCAGCTGCTACTCT+TGG | 0.492285 | tig0001724:+15411 | None:intergenic |
| GGAGATCCAACCATGTAGAC+AGG | 0.498626 | tig0001724:+15124 | None:intergenic |
| TAACACCTTCTTTCTCCGAC+AGG | 0.514033 | tig0001724:-20240 | Msa1338200:intron |
| AGAGGGTGAAGAAGGTGATG+AGG | 0.514844 | tig0001724:+20269 | None:intergenic |
| TTGTCCAGCTTGGGCAGCAA+CGG | 0.515020 | tig0001724:-15164 | Msa1338200:CDS |
| CACATATCGCCTTTAAGGAC+AGG | 0.515314 | tig0001724:+15280 | None:intergenic |
| AATTACCTGTCGGAGAAAGA+AGG | 0.515809 | tig0001724:+20235 | None:intergenic |
| ATATATTGCCTAGTTAATTG+AGG | 0.520821 | tig0001724:+14934 | None:intergenic |
| ATTCTGAGCTGCATATCAAA+AGG | 0.526949 | tig0001724:-14843 | Msa1338200:three_prime_UTR |
| CTGATTACTATGGTACTTGT+CGG | 0.527249 | tig0001724:-15102 | Msa1338200:CDS |
| TCAACGGAACCCTGTCTACA+TGG | 0.530423 | tig0001724:-15134 | Msa1338200:CDS |
| TGGTGGCTATTCAAAGAAAG+AGG | 0.553698 | tig0001724:-17518 | Msa1338200:CDS |
| AGAATCACTGTTGCCATCAA+AGG | 0.553753 | tig0001724:+15866 | None:intergenic |
| AGAAGGTGTTAGAAGCGAGA+GGG | 0.558813 | tig0001724:+20252 | None:intergenic |
| AATGCATGCTGATGAGAAGT+TGG | 0.573489 | tig0001724:-15070 | Msa1338200:exon |
| ATGATGTTCCTCAATTAACT+AGG | 0.580542 | tig0001724:-14942 | Msa1338200:three_prime_UTR |
| CACAGACCAAGAGTAGCAGC+TGG | 0.591686 | tig0001724:-15417 | Msa1338200:intron |
| TGTACATTTCTCAAAAGCAA+AGG | 0.603530 | tig0001724:+14905 | None:intergenic |
| CTGTCCTTAAAGGCGATATG+TGG | 0.609635 | tig0001724:-15279 | Msa1338200:CDS |
| TATACAAGATCGATCAGTGG+AGG | 0.618199 | tig0001724:-15238 | Msa1338200:CDS |
| GAGATTTGGACAACACGTGA+AGG | 0.623698 | tig0001724:+20051 | None:intergenic |
| AGGGAAAGTCTCAACTACGC+TGG | 0.624281 | tig0001724:-15218 | Msa1338200:CDS |
| TTTAGGATGATATTGTCAAG+AGG | 0.632824 | tig0001724:-16120 | Msa1338200:intron |
| ATACAAGATCGATCAGTGGA+GGG | 0.641541 | tig0001724:-15237 | Msa1338200:CDS |
| CAGCAACGGGAGAATGTCAA+CGG | 0.647505 | tig0001724:-15150 | Msa1338200:CDS |
| TTCTATACAAGATCGATCAG+TGG | 0.652183 | tig0001724:-15241 | Msa1338200:CDS |
| GAGATCCAACCATGTAGACA+GGG | 0.668526 | tig0001724:+15125 | None:intergenic |
| ACATATCGCCTTTAAGGACA+GGG | 0.680203 | tig0001724:+15281 | None:intergenic |
| TTGAAGAAGAAGAATCACGG+TGG | 0.754864 | tig0001724:+20318 | None:intergenic |
| AAATTGTAGAAATAACAGTG+AGG | 0.789611 | tig0001724:-15392 | Msa1338200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATAAAGGAATAAA+GGG | + | tig0001724:15179-15198 | None:intergenic | 10.0% |
| !! | AAATAATAATAAAGGAATAA+AGG | + | tig0001724:15180-15199 | None:intergenic | 10.0% |
| !!! | TATTATTTTTTTAAACTCAA+AGG | - | tig0001724:15192-15211 | Msa1338200:CDS | 10.0% |
| !!! | ATTATTTTTTTAAACTCAAA+GGG | - | tig0001724:15193-15212 | Msa1338200:CDS | 10.0% |
| !! | ATTATTATTATTATTATGAG+CGG | - | tig0001724:15425-15444 | Msa1338200:intron | 10.0% |
| !!! | TTTTAAATTTGAGAAAATAT+TGG | - | tig0001724:15559-15578 | Msa1338200:intron | 10.0% |
| !! | TTTAATTATATTATAAGTAG+AGG | - | tig0001724:17399-17418 | Msa1338200:intron | 10.0% |
| !! | TTAATTATATTATAAGTAGA+GGG | - | tig0001724:17400-17419 | Msa1338200:intron | 10.0% |
| !!! | TTTTAAATTACAGAAAATTA+TGG | + | tig0001724:18843-18862 | None:intergenic | 10.0% |
| !!! | TTATTTTTTTAAACTCAAAG+GGG | - | tig0001724:15194-15213 | Msa1338200:CDS | 15.0% |
| !!! | ATTTTTCTATTAGTTTGTTA+TGG | - | tig0001724:15489-15508 | Msa1338200:intron | 15.0% |
| !!! | TTTTTCTATTAGTTTGTTAT+GGG | - | tig0001724:15490-15509 | Msa1338200:intron | 15.0% |
| !! | TATGTTCATTAAAGATATAT+CGG | + | tig0001724:17186-17205 | None:intergenic | 15.0% |
| !! | ATCAATGTAAAACTAATATA+TGG | - | tig0001724:17335-17354 | Msa1338200:intron | 15.0% |
| !! | TAATTATATTATAAGTAGAG+GGG | - | tig0001724:17401-17420 | Msa1338200:intron | 15.0% |
| !! | TTATTGTCGAAAATTAATAT+AGG | - | tig0001724:18527-18546 | Msa1338200:intron | 15.0% |
| !!! | AAATTTGGAATTAACTAATT+AGG | + | tig0001724:18626-18645 | None:intergenic | 15.0% |
| !!! | TCTTTTACATTTTCAAAATT+TGG | + | tig0001724:18641-18660 | None:intergenic | 15.0% |
| !!! | GTAATTTAAAATATCATAAC+CGG | - | tig0001724:18852-18871 | Msa1338200:intron | 15.0% |
| !! | AACGGAAAAAAAAAAATTAA+GGG | + | tig0001724:19477-19496 | None:intergenic | 15.0% |
| !! | AAACGGAAAAAAAAAAATTA+AGG | + | tig0001724:19478-19497 | None:intergenic | 15.0% |
| !!! | TAAATTACACTGTTATTTTT+AGG | + | tig0001724:19677-19696 | None:intergenic | 15.0% |
| !! | TAAAAATAACAGTGTAATTT+AGG | - | tig0001724:19676-19695 | Msa1338200:intron | 15.0% |
| !! | TGATAATTAGAGTGAAATTA+GGG | + | tig0001724:14976-14995 | None:intergenic | 20.0% |
| !! | ATGATAATTAGAGTGAAATT+AGG | + | tig0001724:14977-14996 | None:intergenic | 20.0% |
| !! | AAAAAATGTTCATTTCCATT+TGG | - | tig0001724:15525-15544 | Msa1338200:intron | 20.0% |
| !!! | AATGATATGGTATAGATTTT+TGG | - | tig0001724:15669-15688 | Msa1338200:intron | 20.0% |
| !! | TTGAAAATTTGCATATGTAA+TGG | + | tig0001724:16204-16223 | None:intergenic | 20.0% |
| !! | AGTTGTTTATTAGTAGAATT+CGG | - | tig0001724:16301-16320 | Msa1338200:intron | 20.0% |
| !!! | GTATATTTAAAATGACGATA+TGG | + | tig0001724:17267-17286 | None:intergenic | 20.0% |
| !! | TAAATATACAGTTACAAATG+TGG | - | tig0001724:17278-17297 | Msa1338200:intron | 20.0% |
| !! | AAATATACAGTTACAAATGT+GGG | - | tig0001724:17279-17298 | Msa1338200:intron | 20.0% |
| !! | TTGAAAGTCTTAAATAGAAA+TGG | + | tig0001724:17443-17462 | None:intergenic | 20.0% |
| !! | ATAAGTATAGAAAAAAGTTC+AGG | + | tig0001724:17699-17718 | None:intergenic | 20.0% |
| !!! | AAAACTGTTTTCATTATTTC+TGG | + | tig0001724:18101-18120 | None:intergenic | 20.0% |
| !!! | TTTGACATTTTCATTGTTTA+TGG | - | tig0001724:18121-18140 | Msa1338200:intron | 20.0% |
| !! | AACAAGAACATGTAAAATAA+TGG | + | tig0001724:18418-18437 | None:intergenic | 20.0% |
| !! | TTATAGGATAGAAATATTGA+AGG | + | tig0001724:18448-18467 | None:intergenic | 20.0% |
| !! | TCATTAGTGTTATAAGTTAT+AGG | - | tig0001724:18977-18996 | Msa1338200:intron | 20.0% |
| !! | ACGGAAAAAAAAAAATTAAG+GGG | + | tig0001724:19476-19495 | None:intergenic | 20.0% |
| !! | AAGTAACATTTATAACTGAA+GGG | + | tig0001724:19510-19529 | None:intergenic | 20.0% |
| !! | AAAGTAACATTTATAACTGA+AGG | + | tig0001724:19511-19530 | None:intergenic | 20.0% |
| !! | TGTGTAATGATTGTAATTTA+AGG | - | tig0001724:19613-19632 | Msa1338200:intron | 20.0% |
| !! | GTGTAATGATTGTAATTTAA+GGG | - | tig0001724:19614-19633 | Msa1338200:intron | 20.0% |
| !! | CATAATCAAAAAGAAAACAA+AGG | + | tig0001724:19717-19736 | None:intergenic | 20.0% |
| !!! | TTTTAATTTGATTGGAGAAT+AGG | - | tig0001724:20149-20168 | Msa1338200:intron | 20.0% |
| !!! | ATTTTGAAGAAGAAGAATCA+CGG | + | tig0001724:14854-14873 | None:intergenic | 25.0% |
| ! | TGTGTAATTTAATTACCTGT+CGG | + | tig0001724:14944-14963 | None:intergenic | 25.0% |
| ! | TTAATGTTTGTATTAACAGC+AGG | - | tig0001724:15017-15036 | Msa1338200:three_prime_UTR | 25.0% |
| !! | ATTAATACTGAGCTATGTTT+TGG | + | tig0001724:15407-15426 | None:intergenic | 25.0% |
| !!! | CTAACTAACTACATTTTAGT+TGG | + | tig0001724:15607-15626 | None:intergenic | 25.0% |
| ! | CAACTAAAATGTAGTTAGTT+AGG | - | tig0001724:15605-15624 | Msa1338200:intron | 25.0% |
| ! | TTTGGATTGTCTTGATATAA+TGG | - | tig0001724:15639-15658 | Msa1338200:intron | 25.0% |
| ! | TAATGGTTTATGCAATGATA+TGG | - | tig0001724:15656-15675 | Msa1338200:intron | 25.0% |
| ! | TGAGTACAATATCAGATATT+AGG | - | tig0001724:15724-15743 | Msa1338200:intron | 25.0% |
| ! | GAGTACAATATCAGATATTA+GGG | - | tig0001724:15725-15744 | Msa1338200:intron | 25.0% |
| ! | ATTAGGGTTTAGTACTATAT+TGG | - | tig0001724:15741-15760 | Msa1338200:intron | 25.0% |
| ! | TATAAATTACCAATGATTCG+AGG | - | tig0001724:16253-16272 | Msa1338200:intron | 25.0% |
| ! | AGTAGAATTCGGTTATAATT+TGG | - | tig0001724:16312-16331 | Msa1338200:intron | 25.0% |
| ! | GTAGAATTCGGTTATAATTT+GGG | - | tig0001724:16313-16332 | Msa1338200:intron | 25.0% |
| ! | GCGAATGTGTTTATAAATTA+GGG | + | tig0001724:16386-16405 | None:intergenic | 25.0% |
| ! | TGCGAATGTGTTTATAAATT+AGG | + | tig0001724:16387-16406 | None:intergenic | 25.0% |
| ! | TCTGACATTTGATGAAAATA+TGG | + | tig0001724:16412-16431 | None:intergenic | 25.0% |
| !! | TGATTCTGGATAAACATTTT+TGG | - | tig0001724:16512-16531 | Msa1338200:intron | 25.0% |
| !! | GATTCTGGATAAACATTTTT+GGG | - | tig0001724:16513-16532 | Msa1338200:intron | 25.0% |
| ! | AAACAATGTGGTTATAAGTT+GGG | + | tig0001724:16619-16638 | None:intergenic | 25.0% |
| ! | TTTGGAAGAACTTATGAATA+AGG | + | tig0001724:16805-16824 | None:intergenic | 25.0% |
| ! | TGCAACATACCAAATAAATA+AGG | + | tig0001724:17102-17121 | None:intergenic | 25.0% |
| ! | TTCATTAAAGATATATCGGA+TGG | + | tig0001724:17182-17201 | None:intergenic | 25.0% |
| !! | GTCAGTGTAAATTAGTTTAA+TGG | - | tig0001724:17210-17229 | Msa1338200:intron | 25.0% |
| !! | ATTAGTTTAATGGACATTCA+AGG | - | tig0001724:17220-17239 | Msa1338200:intron | 25.0% |
| !! | TTAGTTTAATGGACATTCAA+GGG | - | tig0001724:17221-17240 | Msa1338200:intron | 25.0% |
| ! | AATATACAGTTACAAATGTG+GGG | - | tig0001724:17280-17299 | Msa1338200:intron | 25.0% |
| !!! | TGAGTTTTTTTTGCAATTCT+TGG | - | tig0001724:17487-17506 | Msa1338200:intron | 25.0% |
| ! | TATACTTATTTCGATGAACT+AGG | - | tig0001724:17710-17729 | Msa1338200:intron | 25.0% |
| !! | GTTTGCATTGTGAAAATTTT+CGG | - | tig0001724:17779-17798 | Msa1338200:intron | 25.0% |
| !! | TATTAGCTTATTCTTTGTGT+AGG | - | tig0001724:17848-17867 | Msa1338200:intron | 25.0% |
| ! | TCAGATATAAACCATTCTTA+GGG | - | tig0001724:17949-17968 | Msa1338200:intron | 25.0% |
| ! | ACAATGTTTCACAAAGTAAA+CGG | + | tig0001724:17976-17995 | None:intergenic | 25.0% |
| !! | TATGTTTTCACAAAGTAAAC+AGG | - | tig0001724:18234-18253 | Msa1338200:intron | 25.0% |
| ! | AGCAGAAAGATATTGAAAAA+CGG | - | tig0001724:18734-18753 | Msa1338200:intron | 25.0% |
| ! | TAACACTAATGAATTGTTCA+TGG | + | tig0001724:18969-18988 | None:intergenic | 25.0% |
| ! | TTGTAGACATTATTATGATG+AGG | - | tig0001724:19007-19026 | Msa1338200:intron | 25.0% |
| ! | TTGATCAAATAGATACCTTT+AGG | + | tig0001724:19105-19124 | None:intergenic | 25.0% |
| ! | TTTCACAAACAAAACCAAAT+TGG | - | tig0001724:19266-19285 | Msa1338200:intron | 25.0% |
| ! | TTCACAAACAAAACCAAATT+GGG | - | tig0001724:19267-19286 | Msa1338200:intron | 25.0% |
| !! | TTGCGTACTATTTATCTTTT+AGG | - | tig0001724:19402-19421 | Msa1338200:intron | 25.0% |
| ! | TTTAGGCTAAATTAAACCTT+TGG | - | tig0001724:19419-19438 | Msa1338200:intron | 25.0% |
| ! | GAAACCTAAAAATGACTTAA+GGG | + | tig0001724:19446-19465 | None:intergenic | 25.0% |
| ! | TGAAACCTAAAAATGACTTA+AGG | + | tig0001724:19447-19466 | None:intergenic | 25.0% |
| ! | ATTACAATCATTACACACTT+TGG | + | tig0001724:19610-19629 | None:intergenic | 25.0% |
| !! | CAAGTTTTTACGTTTCATTT+TGG | + | tig0001724:19641-19660 | None:intergenic | 25.0% |
| ! | CAAAATGAAACGTAAAAACT+TGG | - | tig0001724:19639-19658 | Msa1338200:intron | 25.0% |
| !!! | GTTATTTTTAGGTTTCACTT+TGG | + | tig0001724:19666-19685 | None:intergenic | 25.0% |
| !! | TAATTTAGGATATCTTGTTC+TGG | - | tig0001724:19690-19709 | Msa1338200:intron | 25.0% |
| ! | AAATTGTAGAAATAACAGTG+AGG | - | tig0001724:19774-19793 | Msa1338200:intron | 25.0% |
| !!! | TTTGCACAAATTTTTTTACG+TGG | - | tig0001724:20120-20139 | Msa1338200:CDS | 25.0% |
| !!! | GGTTGCTTTTTTAATTTGAT+TGG | - | tig0001724:20141-20160 | Msa1338200:intron | 25.0% |
| ! | ATATATTGCCTAGTTAATTG+AGG | + | tig0001724:20235-20254 | None:intergenic | 25.0% |
| ATTAGAGTGAAATTAGGGAA+GGG | + | tig0001724:14971-14990 | None:intergenic | 30.0% | |
| AATTAGAGTGAAATTAGGGA+AGG | + | tig0001724:14972-14991 | None:intergenic | 30.0% | |
| TTAACAGCAGGAAAGAATTA+AGG | - | tig0001724:15029-15048 | Msa1338200:three_prime_UTR | 30.0% | |
| AGATTGAACATCAGATTAGT+CGG | + | tig0001724:15355-15374 | None:intergenic | 30.0% | |
| !!! | AGCTATGTTTTGGCTTTAAA+TGG | + | tig0001724:15397-15416 | None:intergenic | 30.0% |
| TATTATTATGAGCGGAAAGA+TGG | - | tig0001724:15433-15452 | Msa1338200:intron | 30.0% | |
| AAAACTAAATCTACGCCAAA+TGG | + | tig0001724:15543-15562 | None:intergenic | 30.0% | |
| CTAAAATGTAGTTAGTTAGG+TGG | - | tig0001724:15608-15627 | Msa1338200:intron | 30.0% | |
| GGCAAAATGATGAATCTATA+AGG | - | tig0001724:16031-16050 | Msa1338200:intron | 30.0% | |
| GGTTGATTGTTCATATAAGT+AGG | - | tig0001724:16052-16071 | Msa1338200:intron | 30.0% | |
| ! | TTAAGTTGTTTATCCAAGCA+TGG | + | tig0001724:16279-16298 | None:intergenic | 30.0% |
| TTGACTCTGACTTACAAAAT+TGG | - | tig0001724:16342-16361 | Msa1338200:intron | 30.0% | |
| ATGTTTATCCAGAATCAGTT+GGG | + | tig0001724:16509-16528 | None:intergenic | 30.0% | |
| AATGTTTATCCAGAATCAGT+TGG | + | tig0001724:16510-16529 | None:intergenic | 30.0% | |
| AGATCTAGGTATTAGAAACT+TGG | - | tig0001724:16539-16558 | Msa1338200:intron | 30.0% | |
| GATCTAGGTATTAGAAACTT+GGG | - | tig0001724:16540-16559 | Msa1338200:intron | 30.0% | |
| CAAACAATGTGGTTATAAGT+TGG | + | tig0001724:16620-16639 | None:intergenic | 30.0% | |
| CAACTTATAACCACATTGTT+TGG | - | tig0001724:16618-16637 | Msa1338200:intron | 30.0% | |
| TAAAATATGGCCAAACAATG+TGG | + | tig0001724:16631-16650 | None:intergenic | 30.0% | |
| GTCCAACATTGGATAAAATA+TGG | + | tig0001724:16644-16663 | None:intergenic | 30.0% | |
| TCATAAGTTCTTCCAAATTG+TGG | - | tig0001724:16808-16827 | Msa1338200:intron | 30.0% | |
| CTATGCAACAACTACTATTA+AGG | + | tig0001724:16898-16917 | None:intergenic | 30.0% | |
| GAATCAACTAGCTGTAAAAA+GGG | + | tig0001724:16979-16998 | None:intergenic | 30.0% | |
| AGAATCAACTAGCTGTAAAA+AGG | + | tig0001724:16980-16999 | None:intergenic | 30.0% | |
| ! | TTTGTACAAAGGCTTTTTGT+CGG | - | tig0001724:17060-17079 | Msa1338200:intron | 30.0% |
| ! | GTGTGACTACCTTATTTATT+TGG | - | tig0001724:17090-17109 | Msa1338200:intron | 30.0% |
| ATATGGCATGGAAAAATGAA+GGG | + | tig0001724:17250-17269 | None:intergenic | 30.0% | |
| ! | TTTAAAATGACGATATGGCA+TGG | + | tig0001724:17262-17281 | None:intergenic | 30.0% |
| TGATGAAGTGAATGATGTAA+AGG | + | tig0001724:17373-17392 | None:intergenic | 30.0% | |
| !!! | TTACTCTATTGTTTTTGCCA+AGG | - | tig0001724:17603-17622 | Msa1338200:intron | 30.0% |
| CAAGAAAAATCATCTGGAAA+TGG | - | tig0001724:17628-17647 | Msa1338200:intron | 30.0% | |
| AAAGAAAGAGGAAACTTCAT+TGG | - | tig0001724:17660-17679 | Msa1338200:intron | 30.0% | |
| ! | AATAGACAAGATTTTCCCAT+CGG | + | tig0001724:17832-17851 | None:intergenic | 30.0% |
| CTTCAAGAATAACTCAATGT+AGG | - | tig0001724:17874-17893 | Msa1338200:intron | 30.0% | |
| GTCAGATATAAACCATTCTT+AGG | - | tig0001724:17948-17967 | Msa1338200:intron | 30.0% | |
| ! | TTTGAAGTGAATCATTGTGA+TGG | - | tig0001724:18042-18061 | Msa1338200:intron | 30.0% |
| !! | TTTTACTTGTTAACAAGCAC+AGG | + | tig0001724:18182-18201 | None:intergenic | 30.0% |
| TATGGTTGATTGAGTGTTAT+AGG | + | tig0001724:18464-18483 | None:intergenic | 30.0% | |
| ACATTTACTTGCAAAACACT+TGG | + | tig0001724:18496-18515 | None:intergenic | 30.0% | |
| ! | AAATTGCCAGGCTTTAATAT+GGG | - | tig0001724:18565-18584 | Msa1338200:intron | 30.0% |
| TAATTAGTGTCCAAAGTTCA+GGG | + | tig0001724:18603-18622 | None:intergenic | 30.0% | |
| GCAACTACTCATATATTTGT+AGG | - | tig0001724:18674-18693 | Msa1338200:intron | 30.0% | |
| CAGAAAATTATGGCCAAATA+TGG | + | tig0001724:18833-18852 | None:intergenic | 30.0% | |
| ! | TATAGTGATAATGATGTCCA+GGG | + | tig0001724:18902-18921 | None:intergenic | 30.0% |
| TAATGAATTGTTCATGGTCA+AGG | + | tig0001724:18963-18982 | None:intergenic | 30.0% | |
| ! | TTTAGGATGATATTGTCAAG+AGG | - | tig0001724:19046-19065 | Msa1338200:intron | 30.0% |
| !!! | GCTTTTAGAATTTGTATCAC+AGG | + | tig0001724:19144-19163 | None:intergenic | 30.0% |
| ATTATGGGCTTGAAAAAGAT+AGG | - | tig0001724:19229-19248 | Msa1338200:intron | 30.0% | |
| GTGAATTAACTGATATTCTC+AGG | - | tig0001724:20185-20204 | Msa1338200:intron | 30.0% | |
| ATGATGTTCCTCAATTAACT+AGG | - | tig0001724:20224-20243 | Msa1338200:intron | 30.0% | |
| TGTACATTTCTCAAAAGCAA+AGG | + | tig0001724:20264-20283 | None:intergenic | 30.0% | |
| GAAACGCAATTCATATTGAG+TGG | + | tig0001724:15299-15318 | None:intergenic | 35.0% | |
| AAATGTAGTTAGTTAGGTGG+TGG | - | tig0001724:15611-15630 | Msa1338200:intron | 35.0% | |
| CACAGCAAGTACATGTAAAA+TGG | + | tig0001724:15706-15725 | None:intergenic | 35.0% | |
| TGGTATTTATAGCCCTTTGT+GGG | - | tig0001724:15790-15809 | Msa1338200:intron | 35.0% | |
| GACCGTTAATATATTCCCAA+GGG | + | tig0001724:15980-15999 | None:intergenic | 35.0% | |
| !!! | ACATTTTTGGGTTGAGATCT+AGG | - | tig0001724:16525-16544 | Msa1338200:intron | 35.0% |
| TAGGTATTAGAAACTTGGGT+TGG | - | tig0001724:16544-16563 | Msa1338200:intron | 35.0% | |
| AGGTATTAGAAACTTGGGTT+GGG | - | tig0001724:16545-16564 | Msa1338200:intron | 35.0% | |
| TATAAGGCTGAGTAAGAGTT+AGG | + | tig0001724:16571-16590 | None:intergenic | 35.0% | |
| !! | ACCTCAAAGTCGGTTTTATA+AGG | + | tig0001724:16587-16606 | None:intergenic | 35.0% |
| ! | GGCCATATTTTATCCAATGT+TGG | - | tig0001724:16639-16658 | Msa1338200:intron | 35.0% |
| AAGTGTTAAGAGTCCAACAT+TGG | + | tig0001724:16655-16674 | None:intergenic | 35.0% | |
| !! | TTTCTTGTTCCTTTTGCTGT+AGG | - | tig0001724:17032-17051 | Msa1338200:intron | 35.0% |
| !! | TTCTTGTTCCTTTTGCTGTA+GGG | - | tig0001724:17033-17052 | Msa1338200:intron | 35.0% |
| ! | TGTAGGGTCTTTTTGTACAA+AGG | - | tig0001724:17049-17068 | Msa1338200:intron | 35.0% |
| GATATGGCATGGAAAAATGA+AGG | + | tig0001724:17251-17270 | None:intergenic | 35.0% | |
| ACATCATTCACTTCATCACT+TGG | - | tig0001724:17375-17394 | Msa1338200:intron | 35.0% | |
| ! | AGATGATTTTTCTTGTGCCT+TGG | + | tig0001724:17623-17642 | None:intergenic | 35.0% |
| AAGGCACAAGAAAAATCATC+TGG | - | tig0001724:17622-17641 | Msa1338200:intron | 35.0% | |
| GAAAAATCATCTGGAAATGG+TGG | - | tig0001724:17631-17650 | Msa1338200:intron | 35.0% | |
| AGAGGAAACTTCATTGGATA+TGG | - | tig0001724:17666-17685 | Msa1338200:intron | 35.0% | |
| GAACTAGGCACTAGTAAATT+AGG | - | tig0001724:17725-17744 | Msa1338200:intron | 35.0% | |
| ! | TTGTTCATTGTTTTCACCGA+TGG | - | tig0001724:17813-17832 | Msa1338200:intron | 35.0% |
| ! | TGTTCATTGTTTTCACCGAT+GGG | - | tig0001724:17814-17833 | Msa1338200:intron | 35.0% |
| CTCAATGTAGGTTAATGTGA+CGG | - | tig0001724:17886-17905 | Msa1338200:intron | 35.0% | |
| AAGAACAAGCTAAACCTATG+AGG | + | tig0001724:18273-18292 | None:intergenic | 35.0% | |
| !! | ACATGTACTGATTGTGTCTT+AGG | - | tig0001724:18323-18342 | Msa1338200:intron | 35.0% |
| !! | AGGTTGACTTGGTTCTTAAT+TGG | - | tig0001724:18343-18362 | Msa1338200:intron | 35.0% |
| ATCAATAACTATTGACCGCT+TGG | + | tig0001724:18387-18406 | None:intergenic | 35.0% | |
| AACACTTGGCTTACAAGTTA+TGG | + | tig0001724:18482-18501 | None:intergenic | 35.0% | |
| ACTTGTAAAAGCAAATTGCC+AGG | - | tig0001724:18553-18572 | Msa1338200:intron | 35.0% | |
| ! | CAAATTGCCAGGCTTTAATA+TGG | - | tig0001724:18564-18583 | Msa1338200:intron | 35.0% |
| GTAATTAGTGTCCAAAGTTC+AGG | + | tig0001724:18604-18623 | None:intergenic | 35.0% | |
| ! | ATAGTGATAATGATGTCCAG+GGG | + | tig0001724:18901-18920 | None:intergenic | 35.0% |
| ! | CTATAGTGATAATGATGTCC+AGG | + | tig0001724:18903-18922 | None:intergenic | 35.0% |
| AACAAGTAATTGCAACGTGT+TGG | + | tig0001724:18926-18945 | None:intergenic | 35.0% | |
| ! | GTTCTACACTGTTCTGTTTT+AGG | - | tig0001724:19029-19048 | Msa1338200:intron | 35.0% |
| GAGGATTGAAGAAAGACTTT+CGG | - | tig0001724:19065-19084 | Msa1338200:intron | 35.0% | |
| TTGAAGAAAGACTTTCGGTT+TGG | - | tig0001724:19070-19089 | Msa1338200:intron | 35.0% | |
| ! | GTTTGGACTTTTCTTCCTAA+AGG | - | tig0001724:19087-19106 | Msa1338200:intron | 35.0% |
| TTTGTATCACAGGCAAATAC+TGG | + | tig0001724:19134-19153 | None:intergenic | 35.0% | |
| CTTTACAGGTCATGCATTAT+GGG | - | tig0001724:19214-19233 | Msa1338200:intron | 35.0% | |
| AAAACCAAATTGGGATCAAC+CGG | - | tig0001724:19276-19295 | Msa1338200:intron | 35.0% | |
| AAAATGACTTAAGGGACCAA+AGG | + | tig0001724:19438-19457 | None:intergenic | 35.0% | |
| !!! | TGGTCCCTTAAGTCATTTTT+AGG | - | tig0001724:19439-19458 | Msa1338200:intron | 35.0% |
| CTGAAGGGACTAAAATGAAA+CGG | + | tig0001724:19495-19514 | None:intergenic | 35.0% | |
| ! | CATTTTTCATTCGAGTCCAT+AGG | - | tig0001724:19543-19562 | Msa1338200:intron | 35.0% |
| AGTTCGTCAAATGTTTCCTA+TGG | + | tig0001724:19562-19581 | None:intergenic | 35.0% | |
| TCTTGTCAGGAGATGTATTT+AGG | + | tig0001724:19846-19865 | None:intergenic | 35.0% | |
| TTCTATACAAGATCGATCAG+TGG | - | tig0001724:19925-19944 | Msa1338200:intron | 35.0% | |
| CTGATTACTATGGTACTTGT+CGG | - | tig0001724:20064-20083 | Msa1338200:intron | 35.0% | |
| ATTCTGAGCTGCATATCAAA+AGG | - | tig0001724:20323-20342 | Msa1338200:five_prime_UTR | 35.0% | |
| TTGAAGAAGAAGAATCACGG+TGG | + | tig0001724:14851-14870 | None:intergenic | 40.0% | |
| GAAGAAGGTGATGAGGATAA+AGG | + | tig0001724:14893-14912 | None:intergenic | 40.0% | |
| AATTACCTGTCGGAGAAAGA+AGG | + | tig0001724:14934-14953 | None:intergenic | 40.0% | |
| !! | TTGAAGAAAGTACCTGACCT+TGG | + | tig0001724:15148-15167 | None:intergenic | 40.0% |
| ACGCAATTCATATTGAGTGG+CGG | + | tig0001724:15296-15315 | None:intergenic | 40.0% | |
| ! | AGTTAGGTGGTGGTTAACTT+TGG | - | tig0001724:15621-15640 | Msa1338200:intron | 40.0% |
| CACTCTTGGAATCATTCTCA+AGG | + | tig0001724:15772-15791 | None:intergenic | 40.0% | |
| CTTGAGAATGATTCCAAGAG+TGG | - | tig0001724:15770-15789 | Msa1338200:intron | 40.0% | |
| AGGGCTATAAATACCACTCT+TGG | + | tig0001724:15786-15805 | None:intergenic | 40.0% | |
| GTGGTATTTATAGCCCTTTG+TGG | - | tig0001724:15789-15808 | Msa1338200:intron | 40.0% | |
| !! | TTCTAGAAGCATCTAGAAGC+AGG | + | tig0001724:15868-15887 | None:intergenic | 40.0% |
| ! | ATGCTTCTAGAAGCTGACTA+AGG | - | tig0001724:15876-15895 | Msa1338200:CDS | 40.0% |
| GGCCCTTGGGAATATATTAA+CGG | - | tig0001724:15975-15994 | Msa1338200:intron | 40.0% | |
| GGACCGTTAATATATTCCCA+AGG | + | tig0001724:15981-16000 | None:intergenic | 40.0% | |
| ! | GCCTTATAAAACCGACTTTG+AGG | - | tig0001724:16583-16602 | Msa1338200:intron | 40.0% |
| !! | TAAAACCGACTTTGAGGTGA+AGG | - | tig0001724:16589-16608 | Msa1338200:intron | 40.0% |
| GAAAACCTTCACCTCAAAGT+CGG | + | tig0001724:16597-16616 | None:intergenic | 40.0% | |
| TCATTGCTGCAACCACAATT+TGG | + | tig0001724:16823-16842 | None:intergenic | 40.0% | |
| ! | GCTTCGTGATTCTTGATAGT+GGG | - | tig0001724:16851-16870 | Msa1338200:intron | 40.0% |
| !! | CTTCGTGATTCTTGATAGTG+GGG | - | tig0001724:16852-16871 | Msa1338200:intron | 40.0% |
| CAAAAAGACCCTACAGCAAA+AGG | + | tig0001724:17044-17063 | None:intergenic | 40.0% | |
| ! | CAAAGGCTTTTTGTCGGATA+AGG | - | tig0001724:17066-17085 | Msa1338200:intron | 40.0% |
| TTGGTATGTTGCAGTCTCAT+TGG | - | tig0001724:17109-17128 | Msa1338200:intron | 40.0% | |
| ! | ATGTTGCAGTCTCATTGGTT+TGG | - | tig0001724:17114-17133 | Msa1338200:intron | 40.0% |
| TGGTGGCTATTCAAAGAAAG+AGG | - | tig0001724:17648-17667 | Msa1338200:intron | 40.0% | |
| AAGTAAACGGACCCTAAGAA+TGG | + | tig0001724:17963-17982 | None:intergenic | 40.0% | |
| !! | GATTGTGTCTTAGGTTGACT+TGG | - | tig0001724:18332-18351 | Msa1338200:intron | 40.0% |
| TATTGACCGCTTGGTAGAAA+AGG | + | tig0001724:18378-18397 | None:intergenic | 40.0% | |
| ! | CCAGGCTTTAATATGGGATT+GGG | - | tig0001724:18571-18590 | Msa1338200:intron | 40.0% |
| TGGGAAAAAACCCTGAACTT+TGG | - | tig0001724:18590-18609 | Msa1338200:intron | 40.0% | |
| CCATAATGCATGACCTGTAA+AGG | + | tig0001724:19216-19235 | None:intergenic | 40.0% | |
| CCTTTACAGGTCATGCATTA+TGG | - | tig0001724:19213-19232 | Msa1338200:intron | 40.0% | |
| ATGGGCTTGAAAAAGATAGG+CGG | - | tig0001724:19232-19251 | Msa1338200:intron | 40.0% | |
| AGAATCACTGTTGCCATCAA+AGG | + | tig0001724:19303-19322 | None:intergenic | 40.0% | |
| ATCTCTCGAATGCTACTCAA+GGG | - | tig0001724:19325-19344 | Msa1338200:intron | 40.0% | |
| ! | ACATATCGCCTTTAAGGACA+GGG | + | tig0001724:19888-19907 | None:intergenic | 40.0% |
| TATACAAGATCGATCAGTGG+AGG | - | tig0001724:19928-19947 | Msa1338200:intron | 40.0% | |
| ATACAAGATCGATCAGTGGA+GGG | - | tig0001724:19929-19948 | Msa1338200:intron | 40.0% | |
| AAGATGATAGTTGTCCAGCT+TGG | - | tig0001724:19992-20011 | Msa1338200:intron | 40.0% | |
| AGATGATAGTTGTCCAGCTT+GGG | - | tig0001724:19993-20012 | Msa1338200:intron | 40.0% | |
| GTTGGATCTCCTGATTACTA+TGG | - | tig0001724:20054-20073 | Msa1338200:intron | 40.0% | |
| CGACAAGTACCATAGTAATC+AGG | + | tig0001724:20066-20085 | None:intergenic | 40.0% | |
| AATGCATGCTGATGAGAAGT+TGG | - | tig0001724:20096-20115 | Msa1338200:CDS | 40.0% | |
| !! | AGAAGGTGTTAGAAGCGAGA+GGG | + | tig0001724:14917-14936 | None:intergenic | 45.0% |
| !! | AAGAAGGTGTTAGAAGCGAG+AGG | + | tig0001724:14918-14937 | None:intergenic | 45.0% |
| TAACACCTTCTTTCTCCGAC+AGG | - | tig0001724:14926-14945 | Msa1338200:three_prime_UTR | 45.0% | |
| GAGATTTGGACAACACGTGA+AGG | + | tig0001724:15118-15137 | None:intergenic | 45.0% | |
| CACGTGTTGTCCAAATCTCT+TGG | - | tig0001724:15119-15138 | Msa1338200:CDS | 45.0% | |
| TCCAAATCTCTTGGCAACCA+AGG | - | tig0001724:15128-15147 | Msa1338200:CDS | 45.0% | |
| ACCTTGGTTGCCAAGAGATT+TGG | + | tig0001724:15132-15151 | None:intergenic | 45.0% | |
| CGCAATTCATATTGAGTGGC+GGG | + | tig0001724:15295-15314 | None:intergenic | 45.0% | |
| CTTTAAATGGACCCCTCAAG+TGG | + | tig0001724:15384-15403 | None:intergenic | 45.0% | |
| ATTTATAGCCCTTTGTGGGC+TGG | - | tig0001724:15794-15813 | Msa1338200:intron | 45.0% | |
| ACTTAAGCTCCATGCAAGCT+GGG | - | tig0001724:15827-15846 | Msa1338200:intron | 45.0% | |
| ! | CTTCTAGAAGCTGACTAAGG+CGG | - | tig0001724:15879-15898 | Msa1338200:CDS | 45.0% |
| ! | TGTGCCTTTAGGAATGCAGA+TGG | - | tig0001724:16177-16196 | Msa1338200:intron | 45.0% |
| TGGACCATCTGCATTCCTAA+AGG | + | tig0001724:16184-16203 | None:intergenic | 45.0% | |
| CAAGAATCACGAAGCGATTG+TGG | + | tig0001724:16846-16865 | None:intergenic | 45.0% | |
| CGCTTCGTGATTCTTGATAG+TGG | - | tig0001724:16850-16869 | Msa1338200:intron | 45.0% | |
| GTTACAAATGTGGGGTGATG+TGG | - | tig0001724:17288-17307 | Msa1338200:intron | 45.0% | |
| GGGGTGATGTGGCAAAATAA+AGG | - | tig0001724:17299-17318 | Msa1338200:intron | 45.0% | |
| GCTCTTACGTTTCACCTCAT+AGG | - | tig0001724:18256-18275 | Msa1338200:intron | 45.0% | |
| ! | GCCAGGCTTTAATATGGGAT+TGG | - | tig0001724:18570-18589 | Msa1338200:intron | 45.0% |
| CCCAATCCCATATTAAAGCC+TGG | + | tig0001724:18574-18593 | None:intergenic | 45.0% | |
| GTGGTTGCATCAGCCATATT+TGG | - | tig0001724:18817-18836 | Msa1338200:intron | 45.0% | |
| !!! | GAGGTTTTAAACTGTGGTCG+CGG | + | tig0001724:18879-18898 | None:intergenic | 45.0% |
| ATCACAGGCAAATACTGGTG+TGG | + | tig0001724:19129-19148 | None:intergenic | 45.0% | |
| AGAGAACAGCAAGCCTTTAC+AGG | - | tig0001724:19200-19219 | Msa1338200:intron | 45.0% | |
| CATCTCTCGAATGCTACTCA+AGG | - | tig0001724:19324-19343 | Msa1338200:intron | 45.0% | |
| TCTCTCGAATGCTACTCAAG+GGG | - | tig0001724:19326-19345 | Msa1338200:intron | 45.0% | |
| AACCCTCTTTCCTGAATCAG+TGG | - | tig0001724:19353-19372 | Msa1338200:intron | 45.0% | |
| !! | CACCACTGATTCAGGAAAGA+GGG | + | tig0001724:19358-19377 | None:intergenic | 45.0% |
| !! | TCACCACTGATTCAGGAAAG+AGG | + | tig0001724:19359-19378 | None:intergenic | 45.0% |
| TCCTGAATCAGTGGTGAGTA+CGG | - | tig0001724:19362-19381 | Msa1338200:intron | 45.0% | |
| ATTTGACCAGCTGCTACTCT+TGG | + | tig0001724:19758-19777 | None:intergenic | 45.0% | |
| ! | CACATATCGCCTTTAAGGAC+AGG | + | tig0001724:19889-19908 | None:intergenic | 45.0% |
| CTGTCCTTAAAGGCGATATG+TGG | - | tig0001724:19887-19906 | Msa1338200:intron | 45.0% | |
| CAGACCACATATCGCCTTTA+AGG | + | tig0001724:19894-19913 | None:intergenic | 45.0% | |
| GAGATCCAACCATGTAGACA+GGG | + | tig0001724:20044-20063 | None:intergenic | 45.0% | |
| !! | GTTTAAAAAAATAATAATAA+AGG | + | tig0001724:15188-15207 | None:intergenic | 5.0% |
| AGAGGGTGAAGAAGGTGATG+AGG | + | tig0001724:14900-14919 | None:intergenic | 50.0% | |
| TAGAAGCGAGAGGGTGAAGA+AGG | + | tig0001724:14908-14927 | None:intergenic | 50.0% | |
| ATCTCTTGGCAACCAAGGTC+AGG | - | tig0001724:15133-15152 | Msa1338200:CDS | 50.0% | |
| !! | TCGGGCAAGTCGGTTTGTTT+GGG | - | tig0001724:15262-15281 | Msa1338200:CDS | 50.0% |
| ! | CATCAGATTAGTCGGTCTGC+CGG | + | tig0001724:15347-15366 | None:intergenic | 50.0% |
| TCAATCTCACCGTCCACTTG+AGG | - | tig0001724:15368-15387 | Msa1338200:CDS | 50.0% | |
| CAATCTCACCGTCCACTTGA+GGG | - | tig0001724:15369-15388 | Msa1338200:CDS | 50.0% | |
| AATCTCACCGTCCACTTGAG+GGG | - | tig0001724:15370-15389 | Msa1338200:CDS | 50.0% | |
| AAATGGACCCCTCAAGTGGA+CGG | + | tig0001724:15380-15399 | None:intergenic | 50.0% | |
| GACTTAAGCTCCATGCAAGC+TGG | - | tig0001724:15826-15845 | Msa1338200:intron | 50.0% | |
| ! | GATCTAAAGCCCAGCTTGCA+TGG | + | tig0001724:15839-15858 | None:intergenic | 50.0% |
| CAGAATGGCTCCAAAGGACT+AGG | + | tig0001724:15923-15942 | None:intergenic | 50.0% | |
| !! | CTAGTCCTTTGGAGCCATTC+TGG | - | tig0001724:15921-15940 | Msa1338200:CDS | 50.0% |
| !! | TCCTTTGGAGCCATTCTGGA+GGG | - | tig0001724:15925-15944 | Msa1338200:CDS | 50.0% |
| TGTCCCAAGACTCGTGCTTA+GGG | + | tig0001724:16010-16029 | None:intergenic | 50.0% | |
| TTGTCCCAAGACTCGTGCTT+AGG | + | tig0001724:16011-16030 | None:intergenic | 50.0% | |
| TAAGCACGAGTCTTGGGACA+AGG | - | tig0001724:16010-16029 | Msa1338200:intron | 50.0% | |
| CGTGCTTTCAGATGCTTGCT+AGG | - | tig0001724:16098-16117 | Msa1338200:CDS | 50.0% | |
| ! | GCTTTCAGATGCTTGCTAGG+CGG | - | tig0001724:16101-16120 | Msa1338200:CDS | 50.0% |
| AAGGCACAGATGCCTCAAGA+AGG | + | tig0001724:16165-16184 | None:intergenic | 50.0% | |
| ! | CTTGAGGCATCTGTGCCTTT+AGG | - | tig0001724:16166-16185 | Msa1338200:intron | 50.0% |
| CAAGCATGGCCTCGAATCAT+TGG | + | tig0001724:16265-16284 | None:intergenic | 50.0% | |
| CAATGATTCGAGGCCATGCT+TGG | - | tig0001724:16263-16282 | Msa1338200:intron | 50.0% | |
| ! | CCAGAGCCTTTTCTACCAAG+CGG | - | tig0001724:18369-18388 | Msa1338200:intron | 50.0% |
| TGTAGGTCCTAACCTGCTCT+CGG | - | tig0001724:18691-18710 | Msa1338200:intron | 50.0% | |
| ACGGTCTGCAATCGCAATTG+TGG | - | tig0001724:18753-18772 | Msa1338200:intron | 50.0% | |
| TGCAATCGCAATTGTGGCTG+CGG | - | tig0001724:18759-18778 | Msa1338200:intron | 50.0% | |
| TTTCCGTGACTGTGTCAGTG+TGG | - | tig0001724:18798-18817 | Msa1338200:intron | 50.0% | |
| CAACCACACTGACACAGTCA+CGG | + | tig0001724:18804-18823 | None:intergenic | 50.0% | |
| TTTAAACTGTGGTCGCGGTC+CGG | + | tig0001724:18874-18893 | None:intergenic | 50.0% | |
| !!! | CCAGGGGAGGTTTTAAACTG+TGG | + | tig0001724:18885-18904 | None:intergenic | 50.0% |
| ! | CCACAGTTTAAAACCTCCCC+TGG | - | tig0001724:18882-18901 | Msa1338200:intron | 50.0% |
| ! | GTGATAATGATGTCCAGGGG+AGG | + | tig0001724:18898-18917 | None:intergenic | 50.0% |
| AGGTCCGGTTGATCCCAATT+TGG | + | tig0001724:19283-19302 | None:intergenic | 50.0% | |
| CACTGTTGCCATCAAAGGTC+CGG | + | tig0001724:19298-19317 | None:intergenic | 50.0% | |
| CTCTCGAATGCTACTCAAGG+GGG | - | tig0001724:19327-19346 | Msa1338200:intron | 50.0% | |
| GCGTGTAAGCTACTCTTGTC+AGG | + | tig0001724:19859-19878 | None:intergenic | 50.0% | |
| AGGGAAAGTCTCAACTACGC+TGG | - | tig0001724:19948-19967 | Msa1338200:intron | 50.0% | |
| CAGCAACGGGAGAATGTCAA+CGG | - | tig0001724:20016-20035 | Msa1338200:intron | 50.0% | |
| TCAACGGAACCCTGTCTACA+TGG | - | tig0001724:20032-20051 | Msa1338200:intron | 50.0% | |
| GGAGATCCAACCATGTAGAC+AGG | + | tig0001724:20045-20064 | None:intergenic | 50.0% | |
| ! | GGTGAGAGCCCTGTTTTGCT+CGG | - | tig0001724:15215-15234 | Msa1338200:CDS | 55.0% |
| GACAGGGTCCGAGCAAAACA+GGG | + | tig0001724:15226-15245 | None:intergenic | 55.0% | |
| !! | GTCGGGCAAGTCGGTTTGTT+TGG | - | tig0001724:15261-15280 | Msa1338200:CDS | 55.0% |
| TCCCGCTCATCCGCATTATC+CGG | - | tig0001724:15325-15344 | Msa1338200:CDS | 55.0% | |
| TGCCGGATAATGCGGATGAG+CGG | + | tig0001724:15330-15349 | None:intergenic | 55.0% | |
| AGTCGGTCTGCCGGATAATG+CGG | + | tig0001724:15338-15357 | None:intergenic | 55.0% | |
| CGCTGTAACCAGCCCACAAA+GGG | + | tig0001724:15805-15824 | None:intergenic | 55.0% | |
| ACGCTGTAACCAGCCCACAA+AGG | + | tig0001724:15806-15825 | None:intergenic | 55.0% | |
| !! | GTCCTTTGGAGCCATTCTGG+AGG | - | tig0001724:15924-15943 | Msa1338200:CDS | 55.0% |
| AAAGCCCTCCAGAAAGGCTC+AGG | + | tig0001724:15953-15972 | None:intergenic | 55.0% | |
| ! | AGCCTTTCTGGAGGGCTTTC+AGG | - | tig0001724:15954-15973 | Msa1338200:CDS | 55.0% |
| TCCCAAGACTCGTGCTTAGG+GGG | + | tig0001724:16008-16027 | None:intergenic | 55.0% | |
| GTCCCAAGACTCGTGCTTAG+GGG | + | tig0001724:16009-16028 | None:intergenic | 55.0% | |
| ! | TTCAGATGCTTGCTAGGCGG+CGG | - | tig0001724:16104-16123 | Msa1338200:CDS | 55.0% |
| AAGAAGGCTCCCTGAAGCTC+GGG | + | tig0001724:16149-16168 | None:intergenic | 55.0% | |
| CAAGAAGGCTCCCTGAAGCT+CGG | + | tig0001724:16150-16169 | None:intergenic | 55.0% | |
| AGCTTCAGGGAGCCTTCTTG+AGG | - | tig0001724:16150-16169 | Msa1338200:intron | 55.0% | |
| TCACCGCTATCAGACCACTC+GGG | + | tig0001724:16471-16490 | None:intergenic | 55.0% | |
| GTCACCGCTATCAGACCACT+CGG | + | tig0001724:16472-16491 | None:intergenic | 55.0% | |
| ! | GATAGCGGTGACCTGATAGC+AGG | - | tig0001724:16480-16499 | Msa1338200:intron | 55.0% |
| CAGTTGGGCAACCTGCTATC+AGG | + | tig0001724:16494-16513 | None:intergenic | 55.0% | |
| ! | GCAGGTTGCCCAACTGATTC+TGG | - | tig0001724:16498-16517 | Msa1338200:intron | 55.0% |
| CCGCTTGGTAGAAAAGGCTC+TGG | + | tig0001724:18372-18391 | None:intergenic | 55.0% | |
| AGCAAAGCCGAGAGCAGGTT+AGG | + | tig0001724:18701-18720 | None:intergenic | 55.0% | |
| CAAACAGCAAAGCCGAGAGC+AGG | + | tig0001724:18706-18725 | None:intergenic | 55.0% | |
| GGGATCAACCGGACCTTTGA+TGG | - | tig0001724:19287-19306 | Msa1338200:intron | 55.0% | |
| !! | GCCGTACTCACCACTGATTC+AGG | + | tig0001724:19366-19385 | None:intergenic | 55.0% |
| CAGCTGCTACTCTTGGTCTG+TGG | + | tig0001724:19751-19770 | None:intergenic | 55.0% | |
| CACAGACCAAGAGTAGCAGC+TGG | - | tig0001724:19749-19768 | Msa1338200:intron | 55.0% | |
| GCTCGATGCCCTGTCCTTAA+AGG | - | tig0001724:19877-19896 | Msa1338200:intron | 55.0% | |
| TTGTCCAGCTTGGGCAGCAA+CGG | - | tig0001724:20002-20021 | Msa1338200:intron | 55.0% | |
| CGGAACCCTGTCTACATGGT+TGG | - | tig0001724:20036-20055 | Msa1338200:intron | 55.0% | |
| CGACAGGGTCCGAGCAAAAC+AGG | + | tig0001724:15227-15246 | None:intergenic | 60.0% | |
| GCCGGATAATGCGGATGAGC+GGG | + | tig0001724:15329-15348 | None:intergenic | 60.0% | |
| GAGCGGAAAGATGGACGCGT+AGG | - | tig0001724:15442-15461 | Msa1338200:intron | 60.0% | |
| GCCCTCCAGAATGGCTCCAA+AGG | + | tig0001724:15929-15948 | None:intergenic | 60.0% | |
| GGCCTGAAAGCCCTCCAGAA+AGG | + | tig0001724:15959-15978 | None:intergenic | 60.0% | |
| TGGAGGGCTTTCAGGCCCTT+GGG | - | tig0001724:15962-15981 | Msa1338200:CDS | 60.0% | |
| AGCCCCCTAAGCACGAGTCT+TGG | - | tig0001724:16003-16022 | Msa1338200:intron | 60.0% | |
| GCCCCCTAAGCACGAGTCTT+GGG | - | tig0001724:16004-16023 | Msa1338200:intron | 60.0% | |
| AGGGACACACCCGAGCTTCA+GGG | - | tig0001724:16137-16156 | Msa1338200:intron | 60.0% | |
| ATGCTCCAGATGGGCGTGAG+GGG | + | tig0001724:16446-16465 | None:intergenic | 60.0% | |
| CATGCTCCAGATGGGCGTGA+GGG | + | tig0001724:16447-16466 | None:intergenic | 60.0% | |
| ACTCGGGCCATGCTCCAGAT+GGG | + | tig0001724:16455-16474 | None:intergenic | 60.0% | |
| TGGCCCGAGTGGTCTGATAG+CGG | - | tig0001724:16465-16484 | Msa1338200:intron | 60.0% | |
| TGTCCAGCTTGGGCAGCAAC+GGG | - | tig0001724:20003-20022 | Msa1338200:intron | 60.0% | |
| ACTAAGGCGGCGCCTCTGGA+AGG | - | tig0001724:15892-15911 | Msa1338200:CDS | 65.0% | |
| ! | CTAAGGCGGCGCCTCTGGAA+GGG | - | tig0001724:15893-15912 | Msa1338200:CDS | 65.0% |
| ! | GAAGGGCGCGCCTAGTCCTT+TGG | - | tig0001724:15910-15929 | Msa1338200:CDS | 65.0% |
| GGCGCCTGAGCCTTTCTGGA+GGG | - | tig0001724:15946-15965 | Msa1338200:CDS | 65.0% | |
| CTGGAGGGCTTTCAGGCCCT+TGG | - | tig0001724:15961-15980 | Msa1338200:CDS | 65.0% | |
| GACTCGTGCTTAGGGGGCTG+TGG | + | tig0001724:16002-16021 | None:intergenic | 65.0% | |
| GAGGGACACACCCGAGCTTC+AGG | - | tig0001724:16136-16155 | Msa1338200:intron | 65.0% | |
| TACACCCCCTCACGCCCATC+TGG | - | tig0001724:16438-16457 | Msa1338200:intron | 65.0% | |
| TGCTCCAGATGGGCGTGAGG+GGG | + | tig0001724:16445-16464 | None:intergenic | 65.0% | |
| CCATGCTCCAGATGGGCGTG+AGG | + | tig0001724:16448-16467 | None:intergenic | 65.0% | |
| ! | CCTCACGCCCATCTGGAGCA+TGG | - | tig0001724:16445-16464 | Msa1338200:intron | 65.0% |
| CACTCGGGCCATGCTCCAGA+TGG | + | tig0001724:16456-16475 | None:intergenic | 65.0% | |
| ! | CATCTGGAGCATGGCCCGAG+TGG | - | tig0001724:16454-16473 | Msa1338200:intron | 65.0% |
| TCTCCCGTTGCTGCCCAAGC+TGG | + | tig0001724:20009-20028 | None:intergenic | 65.0% | |
| TCGGACCCTGTCGCACCACG+AGG | - | tig0001724:15234-15253 | Msa1338200:CDS | 70.0% | |
| CAGCGCCTCGTGGTGCGACA+GGG | + | tig0001724:15242-15261 | None:intergenic | 70.0% | |
| ACAGCGCCTCGTGGTGCGAC+AGG | + | tig0001724:15243-15262 | None:intergenic | 70.0% | |
| !! | GTCGCACCACGAGGCGCTGT+CGG | - | tig0001724:15243-15262 | Msa1338200:CDS | 70.0% |
| !! | TCGCACCACGAGGCGCTGTC+GGG | - | tig0001724:15244-15263 | Msa1338200:CDS | 70.0% |
| ACTTGCCCGACAGCGCCTCG+TGG | + | tig0001724:15252-15271 | None:intergenic | 70.0% | |
| !! | CGAGGCGCTGTCGGGCAAGT+CGG | - | tig0001724:15252-15271 | Msa1338200:CDS | 70.0% |
| GCTGACTAAGGCGGCGCCTC+TGG | - | tig0001724:15888-15907 | Msa1338200:CDS | 70.0% | |
| GACTAGGCGCGCCCTTCCAG+AGG | + | tig0001724:15907-15926 | None:intergenic | 70.0% | |
| GGCTCAGGCGCCCTCCAGAA+TGG | + | tig0001724:15938-15957 | None:intergenic | 70.0% | |
| !! | GGAGGGCGCCTGAGCCTTTC+TGG | - | tig0001724:15942-15961 | Msa1338200:CDS | 70.0% |
| GGGCGCCTGAGCCTTTCTGG+AGG | - | tig0001724:15945-15964 | Msa1338200:CDS | 70.0% | |
| TGCTAGGCGGCGGTGCCTCT+CGG | - | tig0001724:16114-16133 | Msa1338200:CDS | 70.0% | |
| CTCGGGTGTGTCCCTCCGAG+AGG | + | tig0001724:16132-16151 | None:intergenic | 70.0% | |
| TAGGCGGCGGTGCCTCTCGG+AGG | - | tig0001724:16117-16136 | Msa1338200:CDS | 75.0% | |
| AGGCGGCGGTGCCTCTCGGA+GGG | - | tig0001724:16118-16137 | Msa1338200:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0001724 | gene | 14806 | 20382 | 14806 | ID=Msa1338200;Name=Msa1338200 |
| tig0001724 | mRNA | 14806 | 20382 | 14806 | ID=Msa1338200-mRNA-1;Parent=Msa1338200;Name=Msa1338200-mRNA-1;_AED=0.24;_eAED=0.24;_QI=71|0.6|0.66|1|0.8|0.83|6|275|249 |
| tig0001724 | exon | 14806 | 15434 | 14806 | ID=Msa1338200-mRNA-1:exon:1544;Parent=Msa1338200-mRNA-1 |
| tig0001724 | exon | 15874 | 15986 | 15874 | ID=Msa1338200-mRNA-1:exon:1543;Parent=Msa1338200-mRNA-1 |
| tig0001724 | exon | 16080 | 16137 | 16080 | ID=Msa1338200-mRNA-1:exon:1542;Parent=Msa1338200-mRNA-1 |
| tig0001724 | exon | 17498 | 17563 | 17498 | ID=Msa1338200-mRNA-1:exon:1541;Parent=Msa1338200-mRNA-1 |
| tig0001724 | exon | 20065 | 20152 | 20065 | ID=Msa1338200-mRNA-1:exon:1540;Parent=Msa1338200-mRNA-1 |
| tig0001724 | exon | 20241 | 20382 | 20241 | ID=Msa1338200-mRNA-1:exon:1539;Parent=Msa1338200-mRNA-1 |
| tig0001724 | five_prime_UTR | 20312 | 20382 | 20312 | ID=Msa1338200-mRNA-1:five_prime_utr;Parent=Msa1338200-mRNA-1 |
| tig0001724 | CDS | 20241 | 20311 | 20241 | ID=Msa1338200-mRNA-1:cds;Parent=Msa1338200-mRNA-1 |
| tig0001724 | CDS | 20065 | 20152 | 20065 | ID=Msa1338200-mRNA-1:cds;Parent=Msa1338200-mRNA-1 |
| tig0001724 | CDS | 17498 | 17563 | 17498 | ID=Msa1338200-mRNA-1:cds;Parent=Msa1338200-mRNA-1 |
| tig0001724 | CDS | 16080 | 16137 | 16080 | ID=Msa1338200-mRNA-1:cds;Parent=Msa1338200-mRNA-1 |
| tig0001724 | CDS | 15874 | 15986 | 15874 | ID=Msa1338200-mRNA-1:cds;Parent=Msa1338200-mRNA-1 |
| tig0001724 | CDS | 15081 | 15434 | 15081 | ID=Msa1338200-mRNA-1:cds;Parent=Msa1338200-mRNA-1 |
| tig0001724 | three_prime_UTR | 14806 | 15080 | 14806 | ID=Msa1338200-mRNA-1:three_prime_utr;Parent=Msa1338200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
