AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0796530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0796530 MtrunA17_Chr5g0399471 86.574 216 0 2 1 187 1 216 7.67e-128 358
Msa0796530 MtrunA17_Chr2g0321491 85.648 216 2 2 1 187 1 216 2.86e-126 354
Msa0796530 MtrunA17_Chr3g0113691 84.722 216 4 2 1 187 1 216 7.68e-125 350
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0796530 AT1G08360.1 76.389 216 22 2 1 187 1 216 1.33e-98 284
Msa0796530 AT2G27530.2 75.926 216 23 2 1 187 1 216 7.84e-98 282
Msa0796530 AT2G27530.1 75.926 216 23 2 1 187 1 216 7.84e-98 282
Msa0796530 AT5G22440.1 76.498 217 21 3 1 187 1 217 7.15e-96 277
Msa0796530 AT5G22440.2 76.498 217 21 3 1 187 1 217 7.15e-96 277

Find 46 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACACTCAGTTGTACATTT+TGG 0.198216 5_3:+8576075 None:intergenic
CAAACAGATTCCTCGTCTTT+TGG 0.210825 5_3:-8576520 Msa0796530:CDS
TTGGATAATTATAGCCTTAT+AGG 0.228909 5_3:-8575401 Msa0796530:three_prime_UTR
TGGATAATTATAGCCTTATA+GGG 0.275985 5_3:-8575400 Msa0796530:three_prime_UTR
AACAGCTTCAGAGGCTAAAA+AGG 0.290643 5_3:+8576545 None:intergenic
CCTTAGCCTCAAGAGATTCT+TGG 0.298498 5_3:+8576195 None:intergenic
CAATAGTCTCCACAAATTTA+CGG 0.320435 5_3:+8577512 None:intergenic
AAACACAAAGGATTGAAATT+AGG 0.320596 5_3:+8575375 None:intergenic
TTTGGAATCACCCATGATTC+CGG 0.376846 5_3:+8577543 None:intergenic
AGCTGTTGGCAATGTTAGTA+TGG 0.409393 5_3:-8576114 Msa0796530:CDS
TTGAAATTAGGACCCCTATA+AGG 0.433249 5_3:+8575387 None:intergenic
AGAAGCTATTACCGGAATCA+TGG 0.439289 5_3:-8577554 Msa0796530:CDS
ATATTGTAGGCTGAGAAAAT+AGG 0.447267 5_3:-8576651 Msa0796530:intron
TGCACAACACTTTCTTGAGC+TGG 0.451787 5_3:+8576144 None:intergenic
TGCGAAGTGTGCTAGGACGA+TGG 0.452834 5_3:+8577917 None:intergenic
GAGACTATTGAACTCCAGAT+TGG 0.461376 5_3:-8577499 Msa0796530:CDS
GGATAAGCGTTTCAGCGGTT+CGG 0.463331 5_3:-8577452 Msa0796530:intron
GAAGAGGTGCGAAGTGTGCT+AGG 0.479665 5_3:+8577910 None:intergenic
CCAAGAATCTCTTGAGGCTA+AGG 0.491564 5_3:-8576195 Msa0796530:CDS
CATATTAGTCTGTCTGTCTA+GGG 0.503729 5_3:-8577965 None:intergenic
GCTGTGAGAGAAGCTATTAC+CGG 0.513912 5_3:-8577562 Msa0796530:CDS
CTGTTTGATAACAGCTTCAG+AGG 0.515911 5_3:+8576536 None:intergenic
GGCTAAGGTCAACGAGACTA+AGG 0.524689 5_3:-8576180 Msa0796530:CDS
GAAAATAGGATTGGAATCGA+TGG 0.526298 5_3:-8576637 Msa0796530:CDS
CTTGTATCTGAAGAGCTCCA+TGG 0.529145 5_3:-8575602 Msa0796530:CDS
TTGTATCTGAAGAGCTCCAT+GGG 0.541851 5_3:-8575601 Msa0796530:CDS
GTAGGCTGAGAAAATAGGAT+TGG 0.543381 5_3:-8576646 Msa0796530:intron
GCGAAGTGTGCTAGGACGAT+GGG 0.554216 5_3:+8577918 None:intergenic
GAAGCTATTACCGGAATCAT+GGG 0.561503 5_3:-8577553 Msa0796530:CDS
TAGCCTCAAGAGATTCTTGG+TGG 0.564785 5_3:+8576198 None:intergenic
CTCAAGAAAGTGTTGTGCAT+GGG 0.565229 5_3:-8576140 Msa0796530:CDS
CATCTTCGATAGAGAAGAAG+AGG 0.578506 5_3:+8577894 None:intergenic
CTTCTTCTCTATCGAAGATG+AGG 0.586051 5_3:-8577891 Msa0796530:intron
GGTCAACGAGACTAAGGCTA+TGG 0.586274 5_3:-8576174 Msa0796530:CDS
GCTCAAGAAAGTGTTGTGCA+TGG 0.598477 5_3:-8576141 Msa0796530:CDS
TCTTGGTGGGAAACAAGTGT+AGG 0.599437 5_3:+8576212 None:intergenic
CTTGGTGGGAAACAAGTGTA+GGG 0.600430 5_3:+8576213 None:intergenic
AATCAAGCCTTTAAAAGACT+CGG 0.601118 5_3:+8575569 None:intergenic
CAAAAGGATAAGCGTTTCAG+CGG 0.631947 5_3:-8577457 Msa0796530:CDS
GGATAATTATAGCCTTATAG+GGG 0.633700 5_3:-8575399 Msa0796530:three_prime_UTR
AGCCTCAAGAGATTCTTGGT+GGG 0.641849 5_3:+8576199 None:intergenic
TTCCCACCAAGAATCTCTTG+AGG 0.654036 5_3:-8576201 Msa0796530:CDS
GACTCGGTAAGATTTGCCCA+TGG 0.657512 5_3:+8575585 None:intergenic
CTAAAAGATGTAAAACACAA+AGG 0.678049 5_3:+8575363 None:intergenic
TTGTGCATGGGAGTAGCTGT+TGG 0.683745 5_3:-8576128 Msa0796530:CDS
AGACCAGGACCCAAAAGACG+AGG 0.696429 5_3:+8576510 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATTTTTATCAAATCATTAT+CGG + chr5_3:8575969-8575988 None:intergenic 15.0%
!! AAATATAGCACAAAAATAAA+TGG + chr5_3:8576131-8576150 None:intergenic 15.0%
!!! TTTATTTTTGTGCTATATTT+TGG - chr5_3:8576131-8576150 Msa0796530:CDS 15.0%
!! ATTACTAACATAAAACATAA+AGG + chr5_3:8576847-8576866 None:intergenic 15.0%
!! AATTTGAAAGAAACAATTTA+TGG + chr5_3:8576970-8576989 None:intergenic 15.0%
!!! TAACTGAGATTTGATTTATA+TGG - chr5_3:8575603-8575622 Msa0796530:CDS 20.0%
!! TAAAACATAAAGGATATATG+TGG + chr5_3:8576837-8576856 None:intergenic 20.0%
!!! TTTAAATTACCAACTGTTTT+TGG - chr5_3:8576887-8576906 Msa0796530:intron 20.0%
!!! TATTTTGTTATTGTAATAGC+TGG - chr5_3:8577741-8577760 Msa0796530:intron 20.0%
!!! ATTTTGTTATTGTAATAGCT+GGG - chr5_3:8577742-8577761 Msa0796530:intron 20.0%
!! AAATTTACGGTTTTTCTCTT+TGG + chr5_3:8575734-8575753 None:intergenic 25.0%
!!! CATAATTTTTCAAACCAATC+TGG + chr5_3:8575774-8575793 None:intergenic 25.0%
! GAAAAATTATGATCCTCAAA+AGG - chr5_3:8575783-8575802 Msa0796530:intron 25.0%
!! ATAAATTTTGTGACACTGTT+TGG + chr5_3:8576403-8576422 None:intergenic 25.0%
! ATTAGTATGTTGTTGAATTG+TGG + chr5_3:8576473-8576492 None:intergenic 25.0%
!!! TGTCTTTCATTTAGTTTTGA+TGG - chr5_3:8576492-8576511 Msa0796530:intron 25.0%
! GCTAAACAAAAATAAGAAAC+TGG - chr5_3:8576661-8576680 Msa0796530:intron 25.0%
! TGCTAAATAAAATGAAGCAA+CGG + chr5_3:8576925-8576944 None:intergenic 25.0%
! GATGTTATAGACATATACTT+GGG + chr5_3:8577412-8577431 None:intergenic 25.0%
! TGATGTTATAGACATATACT+TGG + chr5_3:8577413-8577432 None:intergenic 25.0%
! TATGGTGAAAATTGAAAACA+AGG + chr5_3:8577520-8577539 None:intergenic 25.0%
!!! CTGCTTTAGAATAAATAATC+AGG - chr5_3:8577586-8577605 Msa0796530:intron 25.0%
! AACAGTTTACATTAATTCGA+TGG + chr5_3:8577615-8577634 None:intergenic 25.0%
!! ATTTTGAATACAGCGAATTT+GGG - chr5_3:8577707-8577726 Msa0796530:intron 25.0%
!! TCATCTTTCTACAATTTTGT+TGG - chr5_3:8577778-8577797 Msa0796530:intron 25.0%
!!! TGTTCTTGAATGTTGTTTTT+TGG - chr5_3:8577823-8577842 Msa0796530:intron 25.0%
!!! TTGGATAATTATAGCCTTAT+AGG - chr5_3:8577855-8577874 Msa0796530:intron 25.0%
!!! TGGATAATTATAGCCTTATA+GGG - chr5_3:8577856-8577875 Msa0796530:intron 25.0%
! AAACACAAAGGATTGAAATT+AGG + chr5_3:8577884-8577903 None:intergenic 25.0%
! CTAAAAGATGTAAAACACAA+AGG + chr5_3:8577896-8577915 None:intergenic 25.0%
GCTTAAAGAAGCTTAAAGAA+AGG + chr5_3:8575534-8575553 None:intergenic 30.0%
AGAGAAAAACCGTAAATTTG+TGG - chr5_3:8575735-8575754 Msa0796530:intron 30.0%
CAATAGTCTCCACAAATTTA+CGG + chr5_3:8575747-8575766 None:intergenic 30.0%
! AAATTTTCATCTTTGGTCTC+GGG + chr5_3:8575846-8575865 None:intergenic 30.0%
! CAAATTTTCATCTTTGGTCT+CGG + chr5_3:8575847-8575866 None:intergenic 30.0%
! AGCATGCAAATTTTCATCTT+TGG + chr5_3:8575853-8575872 None:intergenic 30.0%
AAGATGAAAATTTGCATGCT+TGG - chr5_3:8575853-8575872 Msa0796530:intron 30.0%
AATGCCTTCTATCAAAATGT+CGG - chr5_3:8576046-8576065 Msa0796530:CDS 30.0%
TGTTGAATTGTGGTTACTAA+GGG + chr5_3:8576463-8576482 None:intergenic 30.0%
TTGTTGAATTGTGGTTACTA+AGG + chr5_3:8576464-8576483 None:intergenic 30.0%
CACTCTAATATGCATATTGT+AGG - chr5_3:8576592-8576611 Msa0796530:CDS 30.0%
ATATTGTAGGCTGAGAAAAT+AGG - chr5_3:8576605-8576624 Msa0796530:CDS 30.0%
!! CTTCATTTTATTTAGCAACC+AGG - chr5_3:8576928-8576947 Msa0796530:intron 30.0%
AATTATTGCTTGAGCTGATT+TGG - chr5_3:8576992-8577011 Msa0796530:intron 30.0%
! TAACACTCAGTTGTACATTT+TGG + chr5_3:8577184-8577203 None:intergenic 30.0%
! ATTTTACTCGATGTTATGAG+TGG + chr5_3:8577254-8577273 None:intergenic 30.0%
!! TGCTTTGTTACCTTCTATTT+TGG - chr5_3:8577277-8577296 Msa0796530:intron 30.0%
!! GCTTTGTTACCTTCTATTTT+GGG - chr5_3:8577278-8577297 Msa0796530:intron 30.0%
! CTTTGTTACCTTCTATTTTG+GGG - chr5_3:8577279-8577298 Msa0796530:intron 30.0%
ATTGGATGATGAGCAATAAT+AGG - chr5_3:8577314-8577333 Msa0796530:intron 30.0%
TTATAGACATATACTTGGGA+TGG + chr5_3:8577408-8577427 None:intergenic 30.0%
GAATTAATGTAAACTGTTGC+TGG - chr5_3:8577617-8577636 Msa0796530:intron 30.0%
! AATCTTACCGAGTCTTTTAA+AGG - chr5_3:8577680-8577699 Msa0796530:intron 30.0%
! AATCAAGCCTTTAAAAGACT+CGG + chr5_3:8577690-8577709 None:intergenic 30.0%
! GATTTTGAATACAGCGAATT+TGG - chr5_3:8577706-8577725 Msa0796530:intron 30.0%
!!! TGTTTTTTGGTTACAAACGT+TGG - chr5_3:8577836-8577855 Msa0796530:intron 30.0%
!! GGATAATTATAGCCTTATAG+GGG - chr5_3:8577857-8577876 Msa0796530:intron 30.0%
GACAAGTAGAATAAGAGAGA+GGG + chr5_3:8575403-8575422 None:intergenic 35.0%
AGACAAGTAGAATAAGAGAG+AGG + chr5_3:8575404-8575423 None:intergenic 35.0%
TATTACCTCCTCAACATGTT+GGG + chr5_3:8575884-8575903 None:intergenic 35.0%
TTATTACCTCCTCAACATGT+TGG + chr5_3:8575885-8575904 None:intergenic 35.0%
CAATTCAGCAATAACTACCT+CGG + chr5_3:8576077-8576096 None:intergenic 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG - chr5_3:8576309-8576328 Msa0796530:intron 35.0%
!!! GATGGTATTGATTTTGCATC+TGG - chr5_3:8576510-8576529 Msa0796530:intron 35.0%
GAAAATAGGATTGGAATCGA+TGG - chr5_3:8576619-8576638 Msa0796530:CDS 35.0%
! AAACAGATTCCTCGTCTTTT+GGG - chr5_3:8576737-8576756 Msa0796530:intron 35.0%
GAGTATGAACCAAAAACAGT+TGG + chr5_3:8576899-8576918 None:intergenic 35.0%
GGCAAACTTTCAAATAAACC+TGG + chr5_3:8576949-8576968 None:intergenic 35.0%
!!! GCTGATTTGGATATTTTGCA+TGG - chr5_3:8577005-8577024 Msa0796530:intron 35.0%
!!! TCTTTTTCAACAAGGACACA+AGG + chr5_3:8577211-8577230 None:intergenic 35.0%
TGTCCTTGTTGAAAAAGAAC+TGG - chr5_3:8577213-8577232 Msa0796530:intron 35.0%
!!! TTGCCAGTTCTTTTTCAACA+AGG + chr5_3:8577219-8577238 None:intergenic 35.0%
AAGTAATAGTCCGACATTAG+AGG - chr5_3:8577367-8577386 Msa0796530:intron 35.0%
TCACCATATATGTTCTTCAG+TGG - chr5_3:8577532-8577551 Msa0796530:CDS 35.0%
TTGAAATTAGGACCCCTATA+AGG + chr5_3:8577872-8577891 None:intergenic 35.0%
CATCTTCGATAGAGAAGAAG+AGG + chr5_3:8575365-8575384 None:intergenic 40.0%
CTTCTTCTCTATCGAAGATG+AGG - chr5_3:8575365-8575384 Msa0796530:three_prime_UTR 40.0%
AGAAGCTATTACCGGAATCA+TGG - chr5_3:8575702-8575721 Msa0796530:intron 40.0%
GAAGCTATTACCGGAATCAT+GGG - chr5_3:8575703-8575722 Msa0796530:intron 40.0%
! TTTGGAATCACCCATGATTC+CGG + chr5_3:8575716-8575735 None:intergenic 40.0%
GAGACTATTGAACTCCAGAT+TGG - chr5_3:8575757-8575776 Msa0796530:intron 40.0%
! CTGAAACGCTTATCCTTTTG+AGG + chr5_3:8575799-8575818 None:intergenic 40.0%
CAAAAGGATAAGCGTTTCAG+CGG - chr5_3:8575799-8575818 Msa0796530:intron 40.0%
GTTGCACTCAAACTGTTTGT+TGG - chr5_3:8575911-8575930 Msa0796530:intron 40.0%
ACAAACACGAAACACTGACA+CGG - chr5_3:8575938-8575957 Msa0796530:intron 40.0%
CACTCTATCAAACACGTGTT+CGG + chr5_3:8576023-8576042 None:intergenic 40.0%
!!! AGCACCGACATTTTGATAGA+AGG + chr5_3:8576053-8576072 None:intergenic 40.0%
TGTGTCATCTGACTCATATC+AGG + chr5_3:8576182-8576201 None:intergenic 40.0%
GATACTGTTGTATGCGACTT+AGG - chr5_3:8576204-8576223 Msa0796530:CDS 40.0%
! GCTTTTCTGAGCTTATCTAC+TGG + chr5_3:8576427-8576446 None:intergenic 40.0%
!! TTGATTTTGCATCTGGAGCA+TGG - chr5_3:8576517-8576536 Msa0796530:CDS 40.0%
!! TGATTTTGCATCTGGAGCAT+GGG - chr5_3:8576518-8576537 Msa0796530:CDS 40.0%
GTAGGCTGAGAAAATAGGAT+TGG - chr5_3:8576610-8576629 Msa0796530:CDS 40.0%
AACAGCTTCAGAGGCTAAAA+AGG + chr5_3:8576714-8576733 None:intergenic 40.0%
! CTGTTTGATAACAGCTTCAG+AGG + chr5_3:8576723-8576742 None:intergenic 40.0%
! CAAACAGATTCCTCGTCTTT+TGG - chr5_3:8576736-8576755 Msa0796530:intron 40.0%
! GCAGGCATGTGTTTTCTTTT+GGG - chr5_3:8576776-8576795 Msa0796530:intron 40.0%
! GTGTTTTCTTTTGGGCGTTT+TGG - chr5_3:8576784-8576803 Msa0796530:intron 40.0%
!! GATATTTTGCATGGCTTTGC+AGG - chr5_3:8577014-8577033 Msa0796530:intron 40.0%
!! CTCAAGAAAGTGTTGTGCAT+GGG - chr5_3:8577116-8577135 Msa0796530:intron 40.0%
AGCTGTTGGCAATGTTAGTA+TGG - chr5_3:8577142-8577161 Msa0796530:intron 40.0%
CATCATCACCCCAAAATAGA+AGG + chr5_3:8577290-8577309 None:intergenic 40.0%
! TTGGGGTGATGATGAATCAT+TGG - chr5_3:8577296-8577315 Msa0796530:intron 40.0%
GCACCACTGAAGAACATATA+TGG + chr5_3:8577538-8577557 None:intergenic 40.0%
!! TGTAAACTGTTGCTGGTTTC+AGG - chr5_3:8577624-8577643 Msa0796530:intron 40.0%
TTGTATCTGAAGAGCTCCAT+GGG - chr5_3:8577655-8577674 Msa0796530:intron 40.0%
GCTGTGAGAGAAGCTATTAC+CGG - chr5_3:8575694-8575713 Msa0796530:intron 45.0%
CGAACACGTGTTTGATAGAG+TGG - chr5_3:8576021-8576040 Msa0796530:intron 45.0%
CTTCAGAGGCTAAAAAGGCA+TGG + chr5_3:8576709-8576728 None:intergenic 45.0%
! GGCAGGCATGTGTTTTCTTT+TGG - chr5_3:8576775-8576794 Msa0796530:intron 45.0%
CTTGGTGGGAAACAAGTGTA+GGG + chr5_3:8577046-8577065 None:intergenic 45.0%
TCTTGGTGGGAAACAAGTGT+AGG + chr5_3:8577047-8577066 None:intergenic 45.0%
TTCCCACCAAGAATCTCTTG+AGG - chr5_3:8577055-8577074 Msa0796530:intron 45.0%
AGCCTCAAGAGATTCTTGGT+GGG + chr5_3:8577060-8577079 None:intergenic 45.0%
TAGCCTCAAGAGATTCTTGG+TGG + chr5_3:8577061-8577080 None:intergenic 45.0%
CCTTAGCCTCAAGAGATTCT+TGG + chr5_3:8577064-8577083 None:intergenic 45.0%
CCAAGAATCTCTTGAGGCTA+AGG - chr5_3:8577061-8577080 Msa0796530:intron 45.0%
TGCACAACACTTTCTTGAGC+TGG + chr5_3:8577115-8577134 None:intergenic 45.0%
!! GCTCAAGAAAGTGTTGTGCA+TGG - chr5_3:8577115-8577134 Msa0796530:intron 45.0%
ATAGTCCGACATTAGAGGAC+TGG - chr5_3:8577372-8577391 Msa0796530:intron 45.0%
GAAAGCCAGTCCTCTAATGT+CGG + chr5_3:8577380-8577399 None:intergenic 45.0%
GACATCTTCACAAGGTTGTG+AGG + chr5_3:8577491-8577510 None:intergenic 45.0%
!! ACTGTTGCTGGTTTCAGGTT+AGG - chr5_3:8577629-8577648 Msa0796530:intron 45.0%
CTTGTATCTGAAGAGCTCCA+TGG - chr5_3:8577654-8577673 Msa0796530:intron 45.0%
GGATAAGCGTTTCAGCGGTT+CGG - chr5_3:8575804-8575823 Msa0796530:intron 50.0%
ATCTTTGGTCTCGGGATGTG+AGG + chr5_3:8575838-8575857 None:intergenic 50.0%
! TGGTGATGCCCAACATGTTG+AGG - chr5_3:8575873-8575892 Msa0796530:intron 50.0%
TGATGCCCAACATGTTGAGG+AGG - chr5_3:8575876-8575895 Msa0796530:intron 50.0%
!! TCAAAATGTCGGTGCTACCG+AGG - chr5_3:8576057-8576076 Msa0796530:CDS 50.0%
!! ATTCCTCGTCTTTTGGGTCC+TGG - chr5_3:8576743-8576762 Msa0796530:intron 50.0%
TTTGGGTCCTGGTCTCAACA+AGG - chr5_3:8576754-8576773 Msa0796530:intron 50.0%
GGCTAAGGTCAACGAGACTA+AGG - chr5_3:8577076-8577095 Msa0796530:intron 50.0%
GGTCAACGAGACTAAGGCTA+TGG - chr5_3:8577082-8577101 Msa0796530:intron 50.0%
TTGTGCATGGGAGTAGCTGT+TGG - chr5_3:8577128-8577147 Msa0796530:intron 50.0%
GGTACTGCGACATCTTCACA+AGG + chr5_3:8577499-8577518 None:intergenic 50.0%
! GACTCGGTAAGATTTGCCCA+TGG + chr5_3:8577674-8577693 None:intergenic 50.0%
GCGAAGTGTGCTAGGACGAT+GGG + chr5_3:8575341-8575360 None:intergenic 55.0%
TGCGAAGTGTGCTAGGACGA+TGG + chr5_3:8575342-8575361 None:intergenic 55.0%
! GAAGAGGTGCGAAGTGTGCT+AGG + chr5_3:8575349-8575368 None:intergenic 55.0%
AGACCAGGACCCAAAAGACG+AGG + chr5_3:8576749-8576768 None:intergenic 55.0%
! ATGCCTGCCTTGTTGAGACC+AGG + chr5_3:8576764-8576783 None:intergenic 55.0%
GGTCCTGGTCTCAACAAGGC+AGG - chr5_3:8576758-8576777 Msa0796530:intron 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 8575306 8577972 8575306 ID=Msa0796530;Name=Msa0796530
chr5_3 mRNA 8575306 8577972 8575306 ID=Msa0796530-mRNA-1;Parent=Msa0796530;Name=Msa0796530-mRNA-1;_AED=0.06;_eAED=0.06;_QI=76|0.5|0.6|1|0.75|0.8|5|273|187
chr5_3 exon 8575306 8575632 8575306 ID=Msa0796530-mRNA-1:exon:3600;Parent=Msa0796530-mRNA-1
chr5_3 exon 8576037 8576242 8576037 ID=Msa0796530-mRNA-1:exon:3599;Parent=Msa0796530-mRNA-1
chr5_3 exon 8576514 8576664 8576514 ID=Msa0796530-mRNA-1:exon:3598;Parent=Msa0796530-mRNA-1
chr5_3 exon 8577453 8577600 8577453 ID=Msa0796530-mRNA-1:exon:3597;Parent=Msa0796530-mRNA-1
chr5_3 exon 8577892 8577972 8577892 ID=Msa0796530-mRNA-1:exon:3596;Parent=Msa0796530-mRNA-1
chr5_3 five_prime_UTR 8577897 8577972 8577897 ID=Msa0796530-mRNA-1:five_prime_utr;Parent=Msa0796530-mRNA-1
chr5_3 CDS 8577892 8577896 8577892 ID=Msa0796530-mRNA-1:cds;Parent=Msa0796530-mRNA-1
chr5_3 CDS 8577453 8577600 8577453 ID=Msa0796530-mRNA-1:cds;Parent=Msa0796530-mRNA-1
chr5_3 CDS 8576514 8576664 8576514 ID=Msa0796530-mRNA-1:cds;Parent=Msa0796530-mRNA-1
chr5_3 CDS 8576037 8576242 8576037 ID=Msa0796530-mRNA-1:cds;Parent=Msa0796530-mRNA-1
chr5_3 CDS 8575579 8575632 8575579 ID=Msa0796530-mRNA-1:cds;Parent=Msa0796530-mRNA-1
chr5_3 three_prime_UTR 8575306 8575578 8575306 ID=Msa0796530-mRNA-1:three_prime_utr;Parent=Msa0796530-mRNA-1
Gene Sequence

>Msa0796530

ATGAGTAAGCTTCAGAGTGATGCTGTGAGAGAAGCTATTACCGGAATCATGGGTGATTCCAAAGAGAAAAACCGTAAATTTGTGGAGACTATTGAACTCCAGATTGGTTTGAAAAATTATGATCCTCAAAAGGATAAGCGTTTCAGCGGTTCGGCTGAGAAAATAGGATTGGAATCGATGGATGTTGAAGCTTTGAAGAAGCTAAACAAAAATAAGAAACTGGTGAAGAAATTAGCAAAGAAGTACCATGCCTTTTTAGCCTCTGAAGCTGTTATCAAACAGATTCCTCGTCTTTTGGGTCCTGGAAAGTTCCCTACACTTGTTTCCCACCAAGAATCTCTTGAGGCTAAGGTCAACGAGACTAAGGCTATGGTCAAATTCCAGCTCAAGAAAGTGTTGTGCATGGGAGTAGCTGTTGGCAATGTTAGTATGGACGAAAAACAAATATTCCAAAATGTACAACTGAGTGTTAACTTCCTTGTGTCCTTGTTGAAAAAGAACTGGCAAAATGTTAGGTGCTTGTATCTGAAGAGCTCCATGGGCAAATCTTACCGAGTCTTTTAA

Protein sequence

>Msa0796530

MSKLQSDAVREAITGIMGDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSAEKIGLESMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGKFPTLVSHQESLEAKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSSMGKSYRVF*