AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1168160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1168160 MtrunA17_Chr7g0264841 98.026 304 6 0 1 304 1 304 0.0 610
Msa1168160 MtrunA17_Chr8g0391991 70.492 183 52 1 121 303 1 181 1.17e-89 265
Msa1168160 MtrunA17_Chr6g0471571 72.535 142 37 1 121 262 1 140 4.19e-67 207
Msa1168160 MtrunA17_Chr5g0439711 71.681 113 30 2 192 303 46 157 2.77e-47 156
Msa1168160 MtrunA17_Chr7g0238661 66.990 103 34 0 43 145 1 103 1.06e-43 145
Msa1168160 MtrunA17_Chr3g0093841 26.316 304 183 7 38 303 517 817 5.22e-21 93.6
Msa1168160 MtrunA17_Chr3g0093841 31.148 122 83 1 36 157 189 309 1.94e-17 82.8
Msa1168160 MtrunA17_Chr3g0093841 32.278 158 100 3 32 189 20 170 5.29e-17 81.6
Msa1168160 MtrunA17_Chr3g0093841 27.815 151 102 3 23 171 340 485 5.06e-15 75.5
Msa1168160 MtrunA17_Chr8g0354231 33.607 122 81 0 38 159 21 142 2.64e-17 80.5
Msa1168160 MtrunA17_Chr5g0405761 23.311 296 204 8 6 290 26 309 6.25e-14 71.2
Msa1168160 MtrunA17_Chr1g0176881 26.776 183 117 4 16 186 6 183 6.07e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1168160 AT4G02550.2 24.046 262 187 2 39 300 22 271 8.47e-21 90.5
Msa1168160 AT4G02550.4 24.046 262 187 2 39 300 22 271 8.47e-21 90.5
Msa1168160 AT4G02550.1 23.050 282 194 3 39 300 22 300 1.29e-19 87.4
Msa1168160 AT4G02550.5 23.050 282 194 3 39 300 22 300 1.29e-19 87.4
Msa1168160 AT4G02550.3 23.050 282 194 3 39 300 37 315 1.65e-19 87.4
Msa1168160 AT4G02210.1 22.878 271 193 5 33 303 180 434 2.66e-17 82.4
Msa1168160 AT4G02210.1 31.933 119 77 4 39 155 14 130 8.54e-11 62.8
Msa1168160 AT4G02210.2 22.878 271 193 5 33 303 180 434 2.66e-17 82.4
Msa1168160 AT4G02210.2 31.933 119 77 4 39 155 14 130 8.54e-11 62.8
Msa1168160 AT2G24960.2 25.676 222 157 4 34 251 322 539 4.91e-15 75.9
Msa1168160 AT2G24960.2 28.346 127 88 2 39 163 172 297 3.56e-12 67.4
Msa1168160 AT2G24960.1 28.346 127 88 2 39 163 172 297 3.69e-12 67.4
Msa1168160 AT2G24960.1 23.673 245 156 5 34 251 322 562 6.94e-11 63.5

Find 80 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTTGTCTCTACCCTTAT+TGG 0.077608 7_4:+60781179 None:intergenic
AGCTTACTTCACGTGGAATT+TGG 0.195076 7_4:-60783085 Msa1168160:CDS
AGATGGAAGATAGCAATATT+TGG 0.218412 7_4:-60783128 Msa1168160:CDS
AACACTTCTTGCACCTCTTT+TGG 0.228701 7_4:+60781072 None:intergenic
GATTTGATATATAAGATTAA+AGG 0.229247 7_4:+60780192 None:intergenic
GATTTAAGATCATTCTAAAT+TGG 0.235394 7_4:-60781386 Msa1168160:CDS
TTCGTCTTCGCCTGTTCTTC+TGG 0.242435 7_4:-60786041 Msa1168160:intron
GTCGCCAGACTAACGGAATT+TGG 0.248526 7_4:-60783014 Msa1168160:CDS
TTCGTTACTTGCAGCTTTCT+TGG 0.251907 7_4:-60785019 Msa1168160:intron
ATATTTATGTTCAAACATTT+CGG 0.253592 7_4:-60780129 Msa1168160:three_prime_UTR
ACAATGTACCTGTGCCAATA+AGG 0.269725 7_4:-60781193 Msa1168160:CDS
TATTTATGTTCAAACATTTC+GGG 0.272010 7_4:-60780128 Msa1168160:three_prime_UTR
TAATCTACAACTACTAAATT+CGG 0.280492 7_4:+60780151 None:intergenic
ATTCTAAGTCAAAATGGATT+TGG 0.299149 7_4:-60782868 Msa1168160:CDS
AATGATATTCTAAGTCAAAA+TGG 0.313656 7_4:-60782874 Msa1168160:CDS
ACTTAGAGATCAAAGAAGTT+TGG 0.331117 7_4:-60783037 Msa1168160:CDS
CTGTATACCGCATTTGTTGC+GGG 0.344558 7_4:-60780287 Msa1168160:three_prime_UTR
GATGGAAGATAGCAATATTT+GGG 0.350278 7_4:-60783127 Msa1168160:CDS
CTCTAAATCAATATACTCAT+TGG 0.356023 7_4:+60781245 None:intergenic
GATATATGTGCTAAAGATAA+AGG 0.380018 7_4:-60781351 Msa1168160:CDS
TGCGGGAATTATTACACCTT+TGG 0.382661 7_4:-60780270 Msa1168160:three_prime_UTR
GATCTTAAATCGGAATCGTT+TGG 0.392338 7_4:+60781398 None:intergenic
CTAGTCTATGCAAGAGGTTT+AGG 0.393024 7_4:-60783174 Msa1168160:CDS
CTTAGAGATCAAAGAAGTTT+GGG 0.395713 7_4:-60783036 Msa1168160:CDS
GATTAAAGGAGTTAAAATCT+AGG 0.400479 7_4:+60780206 None:intergenic
AATCTACAACTACTAAATTC+GGG 0.402211 7_4:+60780152 None:intergenic
AATTTAGAATGATCTTAAAT+CGG 0.410859 7_4:+60781388 None:intergenic
AAGTCAAAATGGATTTGGTT+GGG 0.419591 7_4:-60782863 Msa1168160:CDS
AAAGAGCTTACCAGAAGAAC+AGG 0.429171 7_4:+60786031 None:intergenic
ACTAACCTTGAGAGAATTGA+AGG 0.439754 7_4:+60784937 None:intergenic
GCGTCAAACTTTGGCGAAGA+TGG 0.444193 7_4:-60782909 Msa1168160:CDS
AAACTTTGGCGAAGATGGTA+TGG 0.445605 7_4:-60782904 Msa1168160:CDS
AGCAAGGAATTTCACAATTG+AGG 0.453201 7_4:+60786159 None:intergenic
GTCTCTACCCTTATTGGCAC+AGG 0.454687 7_4:+60781185 None:intergenic
TAAGTCAAAATGGATTTGGT+TGG 0.456301 7_4:-60782864 Msa1168160:CDS
GATCGAGCTCCGAGAGAGTA+CGG 0.462532 7_4:+60786125 None:intergenic
CAATGTACCTGTGCCAATAA+GGG 0.467272 7_4:-60781192 Msa1168160:CDS
TTTGTGCAGTTGACGATTGA+AGG 0.468460 7_4:-60780343 Msa1168160:intron
TCCGCTATAAAGCAATCAAT+TGG 0.468621 7_4:-60781011 Msa1168160:CDS
CAATATTTGGGTTAAGAAAG+AGG 0.472672 7_4:-60783115 Msa1168160:CDS
AACTCTCCTCCGTACTCTCT+CGG 0.478652 7_4:-60786134 Msa1168160:five_prime_UTR
GCAAGAAGTGTTGAATGAAA+TGG 0.483806 7_4:-60781061 Msa1168160:CDS
ATTAAAGGAGTTAAAATCTA+GGG 0.502942 7_4:+60780207 None:intergenic
GTTACTTGCAGCTTTCTTGG+CGG 0.506956 7_4:-60785016 Msa1168160:intron
TAAGCAAAAGTGAAAACGCT+TGG 0.512123 7_4:+60784984 None:intergenic
TTTCACCTTCAATTCTCTCA+AGG 0.512283 7_4:-60784942 Msa1168160:intron
CAAAATGGATTTGGTTGGGA+TGG 0.515934 7_4:-60782859 Msa1168160:CDS
GGTTTAGGCCGCAAGACAAA+GGG 0.517366 7_4:-60783159 Msa1168160:CDS
TGAAGGATGATAACTTGAGC+TGG 0.523596 7_4:-60780326 Msa1168160:three_prime_UTR
GGCGAAGACGAAGTAGTTGA+AGG 0.531895 7_4:+60786052 None:intergenic
TGTGCTAAAGATAAAGGAGG+TGG 0.540390 7_4:-60781345 Msa1168160:CDS
TCTGTATACCGCATTTGTTG+CGG 0.549979 7_4:-60780288 Msa1168160:three_prime_UTR
AGGTTTAGGCCGCAAGACAA+AGG 0.552206 7_4:-60783160 Msa1168160:CDS
ACCAATTGATTGCTTTATAG+CGG 0.552413 7_4:+60781010 None:intergenic
AATGTAGATGAAGATGAAGA+AGG 0.559453 7_4:-60781270 Msa1168160:CDS
CTTCACGTGGAATTTGGACA+TGG 0.561471 7_4:-60783079 Msa1168160:CDS
AACTTTGGCGAAGATGGTAT+GGG 0.564966 7_4:-60782903 Msa1168160:CDS
CCGTCGAAGATGAAAATGCA+TGG 0.574985 7_4:-60782819 Msa1168160:CDS
AGTAGAACGTGCAGTTAATG+TGG 0.581141 7_4:-60781316 Msa1168160:CDS
CAATAAGGGTAGAGACAAAG+AGG 0.586320 7_4:-60781178 Msa1168160:CDS
AAAGTGAAAACGCTTGGAGT+AGG 0.588544 7_4:+60784990 None:intergenic
TCTAGTCTAGTCTATGCAAG+AGG 0.592050 7_4:-60783180 Msa1168160:CDS
GGAAGGAAATACTCCAAAAG+AGG 0.596463 7_4:-60781085 Msa1168160:CDS
ATCTACAACTACTAAATTCG+GGG 0.601643 7_4:+60780153 None:intergenic
ATTTATGTTCAAACATTTCG+GGG 0.608149 7_4:-60780127 Msa1168160:three_prime_UTR
AGTTTGGGTCGCCAGACTAA+CGG 0.608284 7_4:-60783021 Msa1168160:CDS
AAGGAATTTCACAATTGAGG+TGG 0.609122 7_4:+60786162 None:intergenic
GAAGTAGTTGAAGGAGTAAG+CGG 0.614729 7_4:+60786061 None:intergenic
TGCATGGAATGAATATGTCA+AGG 0.618662 7_4:-60782803 Msa1168160:intron
ATGCAAGAGCTTACTTCACG+TGG 0.626769 7_4:-60783092 Msa1168160:CDS
TACGGAGGAGAGTTGCAGCA+AGG 0.628884 7_4:+60786143 None:intergenic
AATAATTCCCGCAACAAATG+CGG 0.646757 7_4:+60780280 None:intergenic
AATAAGGGTAGAGACAAAGA+GGG 0.651555 7_4:-60781177 Msa1168160:CDS
ATATGTGCTAAAGATAAAGG+AGG 0.652322 7_4:-60781348 Msa1168160:CDS
ACTAACATAACATTAACCAA+AGG 0.659048 7_4:+60780254 None:intergenic
CATGGAGCGTGTATTAGCTG+AGG 0.663124 7_4:-60783061 Msa1168160:CDS
ATCTTCGCCAAAGTTTGACG+CGG 0.707008 7_4:+60782911 None:intergenic
TCTACAACTACTAAATTCGG+GGG 0.708680 7_4:+60780154 None:intergenic
CGAGCTCCGAGAGAGTACGG+AGG 0.737956 7_4:+60786128 None:intergenic
ATAAGGGTAGAGACAAAGAG+GGG 0.742794 7_4:-60781176 Msa1168160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAACATTTATTTTTTCTT+CGG + chr7_4:60780415-60780434 None:intergenic 10.0%
!!! TGAATCTTTTTTTTTTTTTT+TGG - chr7_4:60782372-60782391 Msa1168160:intron 10.0%
!! TGTTAGTATTAAAATTTATT+TGG - chr7_4:60784089-60784108 Msa1168160:intron 10.0%
!! GTTAGTATTAAAATTTATTT+GGG - chr7_4:60784090-60784109 Msa1168160:intron 10.0%
!! TTAGTATTAAAATTTATTTG+GGG - chr7_4:60784091-60784110 Msa1168160:intron 10.0%
!! AATGAAATAAAAAAAGATAA+AGG + chr7_4:60784274-60784293 None:intergenic 10.0%
!!! ATCAAATTTTTAAGTTTTTG+AGG + chr7_4:60780468-60780487 None:intergenic 15.0%
!!! TCTTTTATATACAGATTAAT+AGG + chr7_4:60780800-60780819 None:intergenic 15.0%
!!! TTTATAAACTTTTACTTCAA+TGG - chr7_4:60781747-60781766 Msa1168160:intron 15.0%
!!! TTATAAACTTTTACTTCAAT+GGG - chr7_4:60781748-60781767 Msa1168160:intron 15.0%
!! AAATAATTGTGAAATCAAAT+AGG - chr7_4:60783804-60783823 Msa1168160:intron 15.0%
!!! TTATGTTTTAAATTGCTTTT+TGG - chr7_4:60784563-60784582 Msa1168160:intron 15.0%
!!! TATGTTTTAAATTGCTTTTT+GGG - chr7_4:60784564-60784583 Msa1168160:intron 15.0%
!! AAATACTTGATTATCTTATT+TGG - chr7_4:60784764-60784783 Msa1168160:intron 15.0%
!!! AATTTAGAATGATCTTAAAT+CGG + chr7_4:60784905-60784924 None:intergenic 15.0%
!! TTGTACAAATTAGTAAAAAA+AGG - chr7_4:60785180-60785199 Msa1168160:intron 15.0%
!!! AGTTAATTCAAAATAAGTTT+TGG - chr7_4:60785459-60785478 Msa1168160:intron 15.0%
!! GATTTGATATATAAGATTAA+AGG + chr7_4:60786101-60786120 None:intergenic 15.0%
!! ATATTTATGTTCAAACATTT+CGG - chr7_4:60786161-60786180 Msa1168160:five_prime_UTR 15.0%
!!! ATTTTTAAGTTTTTGAGGTT+TGG + chr7_4:60780463-60780482 None:intergenic 20.0%
!! ATGACTAAAATTGAAAATCT+TGG - chr7_4:60780500-60780519 Msa1168160:intron 20.0%
!! TGACTAAAATTGAAAATCTT+GGG - chr7_4:60780501-60780520 Msa1168160:intron 20.0%
!! ACTAATAAAATAGATACTTC+CGG + chr7_4:60780578-60780597 None:intergenic 20.0%
!!! TTAGAAAATGTGTTTTTTGT+TGG - chr7_4:60780639-60780658 Msa1168160:intron 20.0%
!!! CTCTTTTGTTAGTAATTTTA+TGG + chr7_4:60780675-60780694 None:intergenic 20.0%
!! TTGCAATTTAGATACATTTA+AGG - chr7_4:60780718-60780737 Msa1168160:intron 20.0%
!! TAAGATATAAGTATCAAAGA+GGG + chr7_4:60780841-60780860 None:intergenic 20.0%
!! TAATTGATACTCTATTGATA+TGG + chr7_4:60781245-60781264 None:intergenic 20.0%
!!! AAAACTTGTTGAGAATTATA+TGG - chr7_4:60781451-60781470 Msa1168160:intron 20.0%
!! CTAAAAAATAAAATGACAAC+TGG + chr7_4:60781585-60781604 None:intergenic 20.0%
!! CAAGATAAGAAATATATCTT+AGG - chr7_4:60782854-60782873 Msa1168160:CDS 20.0%
!! AATGATATTCTAAGTCAAAA+TGG - chr7_4:60783416-60783435 Msa1168160:intron 20.0%
!! TTCCTAAAAAATAACAGTTT+GGG + chr7_4:60784207-60784226 None:intergenic 20.0%
!! TTTCCTAAAAAATAACAGTT+TGG + chr7_4:60784208-60784227 None:intergenic 20.0%
!!! TTTAGGAAAAATTACACTTT+TGG - chr7_4:60784219-60784238 Msa1168160:intron 20.0%
!!! TTATTTCATTTTTTCCCTTT+TGG - chr7_4:60784284-60784303 Msa1168160:intron 20.0%
!! GCTTGAAAATAATATGAAAA+TGG - chr7_4:60784411-60784430 Msa1168160:intron 20.0%
!!! TTATTTCATTTTTGCTCTTT+TGG + chr7_4:60784438-60784457 None:intergenic 20.0%
!! TACTTATTGAAAGTTAAACA+GGG + chr7_4:60784662-60784681 None:intergenic 20.0%
!! ATACTTATTGAAAGTTAAAC+AGG + chr7_4:60784663-60784682 None:intergenic 20.0%
!! TTACTCAAACAAAGTTAAAT+AGG + chr7_4:60784813-60784832 None:intergenic 20.0%
!!! GATTTAAGATCATTCTAAAT+TGG - chr7_4:60784904-60784923 Msa1168160:intron 20.0%
!! ACAAATTAGTAAAAAAAGGA+TGG - chr7_4:60785184-60785203 Msa1168160:intron 20.0%
!! AAAATATATTATTCGAACGT+AGG - chr7_4:60785576-60785595 Msa1168160:intron 20.0%
!!! AAATTTGTTAGGTTATTGAA+TGG - chr7_4:60785767-60785786 Msa1168160:intron 20.0%
!!! AATTTGTTAGGTTATTGAAT+GGG - chr7_4:60785768-60785787 Msa1168160:intron 20.0%
!! ATTAAAGGAGTTAAAATCTA+GGG + chr7_4:60786086-60786105 None:intergenic 20.0%
!! TAATCTACAACTACTAAATT+CGG + chr7_4:60786142-60786161 None:intergenic 20.0%
!! TATTTATGTTCAAACATTTC+GGG - chr7_4:60786162-60786181 Msa1168160:five_prime_UTR 20.0%
! AAGATATAAGTATCAAAGAG+GGG + chr7_4:60780840-60780859 None:intergenic 25.0%
! CTAAGATATAAGTATCAAAG+AGG + chr7_4:60780842-60780861 None:intergenic 25.0%
!!! AGATTAAGTAGTTTGTTTTC+AGG + chr7_4:60781011-60781030 None:intergenic 25.0%
! AACAATACATGAAAATGACT+AGG + chr7_4:60781105-60781124 None:intergenic 25.0%
! CTAAATGCTAAATAATTGCT+GGG + chr7_4:60781128-60781147 None:intergenic 25.0%
! AGAAAAATTTGAGAAACTTC+AGG - chr7_4:60781501-60781520 Msa1168160:intron 25.0%
! AAAAATAAAATGACAACTGG+AGG + chr7_4:60781582-60781601 None:intergenic 25.0%
!!! TATTGGATTAGCATTGTATT+TGG - chr7_4:60781953-60781972 Msa1168160:intron 25.0%
!!! ATTGGATTAGCATTGTATTT+GGG - chr7_4:60781954-60781973 Msa1168160:intron 25.0%
!! TATAAGGTGCTAAATATCTA+GGG + chr7_4:60782450-60782469 None:intergenic 25.0%
! TAATATCTAGTCTCTCTATA+AGG + chr7_4:60782466-60782485 None:intergenic 25.0%
! AATGTAATTGAAAGGTCATT+TGG - chr7_4:60782548-60782567 Msa1168160:intron 25.0%
! ATGTAATTGAAAGGTCATTT+GGG - chr7_4:60782549-60782568 Msa1168160:intron 25.0%
!! GAAAAGTGATCAAATTTTAG+AGG - chr7_4:60782677-60782696 Msa1168160:intron 25.0%
! TTGATCTTCAGACAATTTAA+CGG + chr7_4:60782796-60782815 None:intergenic 25.0%
! GAAATATATCTTAGGTTTAG+TGG - chr7_4:60782862-60782881 Msa1168160:CDS 25.0%
!! TATTTGTTACCGACATTATT+TGG - chr7_4:60782909-60782928 Msa1168160:CDS 25.0%
!! ATTCTAAGTCAAAATGGATT+TGG - chr7_4:60783422-60783441 Msa1168160:intron 25.0%
! CTTATCACAACAAAAGAAAA+GGG + chr7_4:60783667-60783686 None:intergenic 25.0%
! TTAAAGCTAAATAATTGAGC+TGG - chr7_4:60783735-60783754 Msa1168160:intron 25.0%
! TAAAGCTAAATAATTGAGCT+GGG - chr7_4:60783736-60783755 Msa1168160:intron 25.0%
! AATGTAGGTTCTATCAATAT+AGG + chr7_4:60783779-60783798 None:intergenic 25.0%
! ACAATTATTTCGCTTAATGT+AGG + chr7_4:60783794-60783813 None:intergenic 25.0%
! ATTGTGAAATCAAATAGGAA+AGG - chr7_4:60783809-60783828 Msa1168160:intron 25.0%
! TCATATCAGATATTGAAACA+GGG - chr7_4:60784035-60784054 Msa1168160:intron 25.0%
!!! ATGTTGCCTATTTTTTATAG+TGG - chr7_4:60784513-60784532 Msa1168160:intron 25.0%
! TCATGACCACTATAAAAAAT+AGG + chr7_4:60784522-60784541 None:intergenic 25.0%
! TTGTTGGATTTAAAAGTGAT+TGG - chr7_4:60784600-60784619 Msa1168160:intron 25.0%
! TGTTGGATTTAAAAGTGATT+GGG - chr7_4:60784601-60784620 Msa1168160:intron 25.0%
! TAGCATGTATATTACTACTA+TGG + chr7_4:60784726-60784745 None:intergenic 25.0%
!!! TGATTATCTTATTTGGTTTG+TGG - chr7_4:60784771-60784790 Msa1168160:intron 25.0%
!!! GATTATCTTATTTGGTTTGT+GGG - chr7_4:60784772-60784791 Msa1168160:intron 25.0%
! AACAACAATCAATAATGAGT+TGG + chr7_4:60784840-60784859 None:intergenic 25.0%
! GATATATGTGCTAAAGATAA+AGG - chr7_4:60784939-60784958 Msa1168160:intron 25.0%
! CTCTAAATCAATATACTCAT+TGG + chr7_4:60785048-60785067 None:intergenic 25.0%
! ATTAGTAAAAAAAGGATGGA+AGG - chr7_4:60785188-60785207 Msa1168160:intron 25.0%
!!! TGAGAAAAAGAAGTATCTAA+TGG - chr7_4:60785352-60785371 Msa1168160:intron 25.0%
! AAAAACAACTAAGATTACCT+CGG + chr7_4:60785394-60785413 None:intergenic 25.0%
!!! AGGTAATCTTAGTTGTTTTT+GGG - chr7_4:60785394-60785413 Msa1168160:intron 25.0%
!!! GTTTTTGGGTTTATTTTAGT+TGG - chr7_4:60785408-60785427 Msa1168160:intron 25.0%
!!! AAAATAAGTTTTGGAATCAC+AGG - chr7_4:60785468-60785487 Msa1168160:intron 25.0%
! GATATTGTGAGAGAATTAAA+AGG - chr7_4:60785492-60785511 Msa1168160:intron 25.0%
! GATACAATTAACTTCGAAAA+TGG - chr7_4:60785514-60785533 Msa1168160:intron 25.0%
!!! ACTATTGGCTTAAATTTGTT+AGG - chr7_4:60785756-60785775 Msa1168160:intron 25.0%
! ACTAACATAACATTAACCAA+AGG + chr7_4:60786039-60786058 None:intergenic 25.0%
! GATTAAAGGAGTTAAAATCT+AGG + chr7_4:60786087-60786106 None:intergenic 25.0%
! AATCTACAACTACTAAATTC+GGG + chr7_4:60786141-60786160 None:intergenic 25.0%
! ATTTATGTTCAAACATTTCG+GGG - chr7_4:60786163-60786182 Msa1168160:five_prime_UTR 25.0%
!! GATCCTCAAATATGTTGTTT+TGG - chr7_4:60780604-60780623 Msa1168160:intron 30.0%
CTACCAAAACAACATATTTG+AGG + chr7_4:60780610-60780629 None:intergenic 30.0%
!!! GTGTTTTTTGTTGGTTGATA+CGG - chr7_4:60780648-60780667 Msa1168160:intron 30.0%
GAGTTTGTGTGCATATATAT+TGG - chr7_4:60780977-60780996 Msa1168160:CDS 30.0%
TATACTGTTATTCTGCATTC+TGG - chr7_4:60781057-60781076 Msa1168160:CDS 30.0%
CCTAAATGCTAAATAATTGC+TGG + chr7_4:60781129-60781148 None:intergenic 30.0%
CCAGCAATTATTTAGCATTT+AGG - chr7_4:60781126-60781145 Msa1168160:CDS 30.0%
TACTCTATTGATATGGTCTT+TGG + chr7_4:60781238-60781257 None:intergenic 30.0%
!! TTACTGATCTACTTTTCACT+GGG - chr7_4:60781662-60781681 Msa1168160:intron 30.0%
AATCTATGCGATTCATCTTA+CGG - chr7_4:60781713-60781732 Msa1168160:intron 30.0%
! TTCTACATAATGGAATTCGA+AGG + chr7_4:60781816-60781835 None:intergenic 30.0%
GAATTCCATTATGTAGAAGA+AGG - chr7_4:60781818-60781837 Msa1168160:intron 30.0%
! TTTTGCCTTCTTCTACATAA+TGG + chr7_4:60781826-60781845 None:intergenic 30.0%
CCATTAATACAAAATGGATG+TGG + chr7_4:60781919-60781938 None:intergenic 30.0%
! CCACATCCATTTTGTATTAA+TGG - chr7_4:60781916-60781935 Msa1168160:intron 30.0%
! CATCCATTTTGTATTAATGG+CGG - chr7_4:60781919-60781938 Msa1168160:intron 30.0%
AATTCTTGTGAGTTAACATG+CGG - chr7_4:60782015-60782034 Msa1168160:intron 30.0%
TAAGAAGAAGATGAAGAAGA+GGG + chr7_4:60782185-60782204 None:intergenic 30.0%
! GGAATTCGAAGACAATTTTA+CGG + chr7_4:60782291-60782310 None:intergenic 30.0%
AATTGTCTTCGAATTCCAAA+TGG - chr7_4:60782294-60782313 Msa1168160:intron 30.0%
!!! TTTTTTTGGAAAACCGTTGT+AGG - chr7_4:60782386-60782405 Msa1168160:intron 30.0%
!! GAAAGTATTTACACCTACAA+CGG + chr7_4:60782402-60782421 None:intergenic 30.0%
TAGGTGTAAATACTTTCTTG+TGG - chr7_4:60782405-60782424 Msa1168160:intron 30.0%
TAAATACTTTCTTGTGGATG+TGG - chr7_4:60782411-60782430 Msa1168160:intron 30.0%
AAATACTTTCTTGTGGATGT+GGG - chr7_4:60782412-60782431 Msa1168160:intron 30.0%
! CTATAAGGTGCTAAATATCT+AGG + chr7_4:60782451-60782470 None:intergenic 30.0%
CTAGATATTATCTCAAAGAG+TGG - chr7_4:60782476-60782495 Msa1168160:intron 30.0%
TATTATCTCAAAGAGTGGAA+TGG - chr7_4:60782481-60782500 Msa1168160:intron 30.0%
! ACAACTCCTTGTAATTTTGA+GGG + chr7_4:60782513-60782532 None:intergenic 30.0%
TTGGGATATTGAAGAAAAGA+TGG - chr7_4:60782567-60782586 Msa1168160:intron 30.0%
AGGGAAAGAGTAATAACTAA+CGG - chr7_4:60782753-60782772 Msa1168160:intron 30.0%
AATAACTAACGGAGTAAATG+AGG - chr7_4:60782764-60782783 Msa1168160:intron 30.0%
!!! TTTGTTGCTTTTGATTGCTA+AGG - chr7_4:60782955-60782974 Msa1168160:CDS 30.0%
AGATGGAAGATAGCAATATT+TGG - chr7_4:60783162-60783181 Msa1168160:CDS 30.0%
GATGGAAGATAGCAATATTT+GGG - chr7_4:60783163-60783182 Msa1168160:CDS 30.0%
! CAATATTTGGGTTAAGAAAG+AGG - chr7_4:60783175-60783194 Msa1168160:CDS 30.0%
ACTTAGAGATCAAAGAAGTT+TGG - chr7_4:60783253-60783272 Msa1168160:intron 30.0%
CTTAGAGATCAAAGAAGTTT+GGG - chr7_4:60783254-60783273 Msa1168160:intron 30.0%
!! CGTTTTAATGTTCAGCTTAT+CGG - chr7_4:60783341-60783360 Msa1168160:intron 30.0%
! TAAGTCAAAATGGATTTGGT+TGG - chr7_4:60783426-60783445 Msa1168160:intron 30.0%
! AAGTCAAAATGGATTTGGTT+GGG - chr7_4:60783427-60783446 Msa1168160:intron 30.0%
GCTTATCACAACAAAAGAAA+AGG + chr7_4:60783668-60783687 None:intergenic 30.0%
CAATATAGGCATTCATAATC+AGG + chr7_4:60783765-60783784 None:intergenic 30.0%
GTCATATCAGATATTGAAAC+AGG - chr7_4:60784034-60784053 Msa1168160:intron 30.0%
TTATGTCTAGTACTATGCTT+TGG - chr7_4:60784160-60784179 Msa1168160:intron 30.0%
! TGGTTGTGTTTTTCATTTGT+AGG - chr7_4:60784180-60784199 Msa1168160:intron 30.0%
!!! GACCCAAACTGTTATTTTTT+AGG - chr7_4:60784202-60784221 Msa1168160:intron 30.0%
GTTGCCTGAAATTAAGTTAA+GGG + chr7_4:60784246-60784265 None:intergenic 30.0%
AGTTGCCTGAAATTAAGTTA+AGG + chr7_4:60784247-60784266 None:intergenic 30.0%
TAACTTAATTTCAGGCAACT+TGG - chr7_4:60784247-60784266 Msa1168160:intron 30.0%
CATATGGAAATGAACCAAAA+GGG + chr7_4:60784301-60784320 None:intergenic 30.0%
! TTTGAAGCTTGAAATCCATA+TGG + chr7_4:60784317-60784336 None:intergenic 30.0%
GATTTCAAGCTTCAAATCTA+TGG - chr7_4:60784321-60784340 Msa1168160:intron 30.0%
TTTCCCAATCTTCAAATCTA+TGG - chr7_4:60784350-60784369 Msa1168160:intron 30.0%
AGACCATAGATTTGAAGATT+GGG + chr7_4:60784356-60784375 None:intergenic 30.0%
AAGACCATAGATTTGAAGAT+TGG + chr7_4:60784357-60784376 None:intergenic 30.0%
! TCTAAAATTCATACGCAAAC+AGG + chr7_4:60784385-60784404 None:intergenic 30.0%
CTTAATTGCAGGTAACAATT+TGG + chr7_4:60784474-60784493 None:intergenic 30.0%
TGTTACCTGCAATTAAGTTA+AGG - chr7_4:60784477-60784496 Msa1168160:intron 30.0%
GTTACCTGCAATTAAGTTAA+GGG - chr7_4:60784478-60784497 Msa1168160:intron 30.0%
! AATAGGCAACATTAGACTTT+TGG + chr7_4:60784505-60784524 None:intergenic 30.0%
!!! TAAATTGCTTTTTGGGTCTT+AGG - chr7_4:60784571-60784590 Msa1168160:intron 30.0%
ATTCTGGATTGTTATAGCTA+CGG - chr7_4:60784629-60784648 Msa1168160:intron 30.0%
CTTTCAATAAGTATATGCCA+TGG - chr7_4:60784669-60784688 Msa1168160:intron 30.0%
! GTATATGCCATGGTTTATTT+TGG - chr7_4:60784679-60784698 Msa1168160:intron 30.0%
GTAGTAATATACATGCTAGT+CGG - chr7_4:60784728-60784747 Msa1168160:intron 30.0%
AAACAAAGTTAAATAGGACC+TGG + chr7_4:60784807-60784826 None:intergenic 30.0%
ATATGTGCTAAAGATAAAGG+AGG - chr7_4:60784942-60784961 Msa1168160:intron 30.0%
AATGTAGATGAAGATGAAGA+AGG - chr7_4:60785020-60785039 Msa1168160:intron 30.0%
! TTTTTCTTTGTTGCAGAACT+TGG + chr7_4:60785074-60785093 None:intergenic 30.0%
ACCAATTGATTGCTTTATAG+CGG + chr7_4:60785283-60785302 None:intergenic 30.0%
!! TTGAGAATCGCTATTTTGTT+TGG + chr7_4:60785317-60785336 None:intergenic 30.0%
! TACTTCTTTTTCTCACTCAA+CGG + chr7_4:60785347-60785366 None:intergenic 30.0%
!! GAGGTAATCTTAGTTGTTTT+TGG - chr7_4:60785393-60785412 Msa1168160:intron 30.0%
ATAGGTTGTGTAACACTTAT+TGG - chr7_4:60785675-60785694 Msa1168160:intron 30.0%
TTGTCCACAAAAAATCAAGT+TGG + chr7_4:60785737-60785756 None:intergenic 30.0%
!!! GATTTTTTGTGGACAACTAT+TGG - chr7_4:60785741-60785760 Msa1168160:intron 30.0%
! TCTTGTTAGTTGGTATACAT+GGG - chr7_4:60785873-60785892 Msa1168160:intron 30.0%
ATCTACAACTACTAAATTCG+GGG + chr7_4:60786140-60786159 None:intergenic 30.0%
AAGGAATTTCACAATTGAGG+TGG + chr7_4:60780131-60780150 None:intergenic 35.0%
AGCAAGGAATTTCACAATTG+AGG + chr7_4:60780134-60780153 None:intergenic 35.0%
GACATAATGAACAATAAGCG+TGG + chr7_4:60780366-60780385 None:intergenic 35.0%
ATCGAAATTGCAAACACATC+CGG - chr7_4:60780556-60780575 Msa1168160:intron 35.0%
TTACTAACAAAAGAGAGACC+AGG - chr7_4:60780680-60780699 Msa1168160:intron 35.0%
TACTAACAAAAGAGAGACCA+GGG - chr7_4:60780681-60780700 Msa1168160:intron 35.0%
! TTTCGAGCAAACAACCATTT+TGG + chr7_4:60780776-60780795 None:intergenic 35.0%
ATACATGAAAATGACTAGGC+TGG + chr7_4:60781101-60781120 None:intergenic 35.0%
TTCAGCAGCACTATTAATGT+TGG - chr7_4:60781184-60781203 Msa1168160:CDS 35.0%
ATGTTGGAGAAATGTGTTAC+TGG - chr7_4:60781200-60781219 Msa1168160:CDS 35.0%
TAAGCAAAAGTGAAAACGCT+TGG + chr7_4:60781309-60781328 None:intergenic 35.0%
TTTCACCTTCAATTCTCTCA+AGG - chr7_4:60781348-60781367 Msa1168160:CDS 35.0%
ACTAACCTTGAGAGAATTGA+AGG + chr7_4:60781356-60781375 None:intergenic 35.0%
TTCTTTGATCTCTACAGAGA+GGG + chr7_4:60781485-60781504 None:intergenic 35.0%
TTTCTTTGATCTCTACAGAG+AGG + chr7_4:60781486-60781505 None:intergenic 35.0%
! GAGAAACTTCAGGATTTTCT+TGG - chr7_4:60781511-60781530 Msa1168160:intron 35.0%
!! CTTACTGATCTACTTTTCAC+TGG - chr7_4:60781661-60781680 Msa1168160:intron 35.0%
TCTCCGCCATTAATACAAAA+TGG + chr7_4:60781925-60781944 None:intergenic 35.0%
! GAAGCCTTTATTTGATGCTT+TGG - chr7_4:60782056-60782075 Msa1168160:intron 35.0%
! CGATGATTCTCAATTTTCAC+TGG + chr7_4:60782111-60782130 None:intergenic 35.0%
ATAACCTTGTCATGACTTTG+TGG - chr7_4:60782131-60782150 Msa1168160:intron 35.0%
GTAAGAAGAAGATGAAGAAG+AGG + chr7_4:60782186-60782205 None:intergenic 35.0%
! GTTCTTCTTGGTTGCATTTT+TGG - chr7_4:60782220-60782239 Msa1168160:intron 35.0%
!! TGCATTTTTGGATCCCATTA+TGG - chr7_4:60782232-60782251 Msa1168160:intron 35.0%
!! ATTTTTGGATCCCATTATGG+AGG - chr7_4:60782235-60782254 Msa1168160:intron 35.0%
ATACTCATCGTACTACCATT+TGG + chr7_4:60782312-60782331 None:intergenic 35.0%
AAACACCCCTCAAAATTACA+AGG - chr7_4:60782504-60782523 Msa1168160:intron 35.0%
! CAACTCCTTGTAATTTTGAG+GGG + chr7_4:60782512-60782531 None:intergenic 35.0%
! GACAACTCCTTGTAATTTTG+AGG + chr7_4:60782514-60782533 None:intergenic 35.0%
ATTACATTCCTTGCACTTGA+AGG + chr7_4:60782536-60782555 None:intergenic 35.0%
GTGCAAGGAATGTAATTGAA+AGG - chr7_4:60782540-60782559 Msa1168160:intron 35.0%
!! AATTTTAGAGGCTCAAGACT+TGG - chr7_4:60782689-60782708 Msa1168160:intron 35.0%
! GCTTTTATCTGTTGTTGATG+AGG - chr7_4:60782713-60782732 Msa1168160:intron 35.0%
AGGAGTTAACCAACTAACAA+AGG - chr7_4:60782733-60782752 Msa1168160:intron 35.0%
GGAGTTAACCAACTAACAAA+GGG - chr7_4:60782734-60782753 Msa1168160:intron 35.0%
TACTCTTTCCCTTTGTTAGT+TGG + chr7_4:60782745-60782764 None:intergenic 35.0%
CTAACAGCTCCAAATAATGT+CGG + chr7_4:60782921-60782940 None:intergenic 35.0%
! GACATTATTTGGAGCTGTTA+GGG - chr7_4:60782920-60782939 Msa1168160:CDS 35.0%
! TTCTTTTTCCCTTTGTCTTG+CGG + chr7_4:60783142-60783161 None:intergenic 35.0%
GACAAAGGGAAAAAGAAAGA+TGG - chr7_4:60783145-60783164 Msa1168160:CDS 35.0%
! TTTTCCAAATTCCGTTAGTC+TGG + chr7_4:60783283-60783302 None:intergenic 35.0%
TGCATGGAATGAATATGTCA+AGG - chr7_4:60783487-60783506 Msa1168160:intron 35.0%
AAGGTTGTCATCATCAATGA+AGG + chr7_4:60783619-60783638 None:intergenic 35.0%
ATCACAACAAAAGAAAAGGG+AGG + chr7_4:60783664-60783683 None:intergenic 35.0%
AACAAAAAACACCAGTGTAG+AGG + chr7_4:60783700-60783719 None:intergenic 35.0%
!!! ACACTGGTGTTTTTTGTTAG+AGG - chr7_4:60783702-60783721 Msa1168160:intron 35.0%
!!! CACTGGTGTTTTTTGTTAGA+GGG - chr7_4:60783703-60783722 Msa1168160:intron 35.0%
!! TTAGAGGGGGGTATTATATA+CGG + chr7_4:60783928-60783947 None:intergenic 35.0%
TGGTTAGTGATGTGTCATAT+GGG + chr7_4:60783965-60783984 None:intergenic 35.0%
TTGGTTAGTGATGTGTCATA+TGG + chr7_4:60783966-60783985 None:intergenic 35.0%
TGGTCCCTTAACTTAATTTC+AGG - chr7_4:60784239-60784258 Msa1168160:intron 35.0%
CCATATGGAAATGAACCAAA+AGG + chr7_4:60784302-60784321 None:intergenic 35.0%
!!! CCTTTTGGTTCATTTCCATA+TGG - chr7_4:60784299-60784318 Msa1168160:intron 35.0%
AAGTGATTGGGTTTAGATTC+TGG - chr7_4:60784613-60784632 Msa1168160:intron 35.0%
TTCTGGATTGTTATAGCTAC+GGG - chr7_4:60784630-60784649 Msa1168160:intron 35.0%
ACCACAACCAAAATAAACCA+TGG + chr7_4:60784689-60784708 None:intergenic 35.0%
!! ATTTGGTTTGTGGGCAAAAA+AGG - chr7_4:60784781-60784800 Msa1168160:intron 35.0%
GATCTTAAATCGGAATCGTT+TGG + chr7_4:60784895-60784914 None:intergenic 35.0%
!! GCAAGAAGTGTTGAATGAAA+TGG - chr7_4:60785229-60785248 Msa1168160:intron 35.0%
TCCGCTATAAAGCAATCAAT+TGG - chr7_4:60785279-60785298 Msa1168160:intron 35.0%
AACATGAACAAAGTCACTCT+AGG + chr7_4:60785633-60785652 None:intergenic 35.0%
ATGTTCAGAGATTGCATTGT+AGG - chr7_4:60785648-60785667 Msa1168160:intron 35.0%
TGTGTAACACTTATTGGTGA+AGG - chr7_4:60785681-60785700 Msa1168160:intron 35.0%
!! CACAAAAAATCAAGTTGGCA+TGG + chr7_4:60785732-60785751 None:intergenic 35.0%
!!! CATGCCAACTTGATTTTTTG+TGG - chr7_4:60785730-60785749 Msa1168160:intron 35.0%
! CTCTTGTTAGTTGGTATACA+TGG - chr7_4:60785872-60785891 Msa1168160:intron 35.0%
AATAATTCCCGCAACAAATG+CGG + chr7_4:60786013-60786032 None:intergenic 35.0%
TCTACAACTACTAAATTCGG+GGG + chr7_4:60786139-60786158 None:intergenic 35.0%
GAAGTAGTTGAAGGAGTAAG+CGG + chr7_4:60780232-60780251 None:intergenic 40.0%
AAAGAGCTTACCAGAAGAAC+AGG + chr7_4:60780262-60780281 None:intergenic 40.0%
TGAACAATAAGCGTGGTGTT+GGG + chr7_4:60780359-60780378 None:intergenic 40.0%
ATGAACAATAAGCGTGGTGT+TGG + chr7_4:60780360-60780379 None:intergenic 40.0%
GTAGTTAGTGTTATCCAGCA+GGG + chr7_4:60780890-60780909 None:intergenic 40.0%
! TAGTGCTGCTGAATAGATAC+TGG + chr7_4:60781177-60781196 None:intergenic 40.0%
TTCGTTACTTGCAGCTTTCT+TGG - chr7_4:60781271-60781290 Msa1168160:CDS 40.0%
AAAGTGAAAACGCTTGGAGT+AGG + chr7_4:60781303-60781322 None:intergenic 40.0%
GAGGACAATGAAGAAGAAGA+GGG + chr7_4:60781864-60781883 None:intergenic 40.0%
TGAGGACAATGAAGAAGAAG+AGG + chr7_4:60781865-60781884 None:intergenic 40.0%
AGTAGAACACAGTAGTGATG+AGG + chr7_4:60781883-60781902 None:intergenic 40.0%
! GGCTCCAAAGCATCAAATAA+AGG + chr7_4:60782063-60782082 None:intergenic 40.0%
TTCACCACAAAGTCATGACA+AGG + chr7_4:60782138-60782157 None:intergenic 40.0%
CTTCTTACCTGTTCTCATAG+TGG - chr7_4:60782198-60782217 Msa1168160:intron 40.0%
AGAAGAACCACTATGAGAAC+AGG + chr7_4:60782208-60782227 None:intergenic 40.0%
GTTCTCATAGTGGTTCTTCT+TGG - chr7_4:60782208-60782227 Msa1168160:intron 40.0%
TCGAGAATCTCCTCCATAAT+GGG + chr7_4:60782248-60782267 None:intergenic 40.0%
GTGGATGTGGGATATACAAA+TGG - chr7_4:60782424-60782443 Msa1168160:intron 40.0%
! CGACATTATTTGGAGCTGTT+AGG - chr7_4:60782919-60782938 Msa1168160:CDS 40.0%
AAGGAATCTCATAGATTGCG+TGG - chr7_4:60782974-60782993 Msa1168160:CDS 40.0%
TCTAGTCTAGTCTATGCAAG+AGG - chr7_4:60783110-60783129 Msa1168160:CDS 40.0%
CTAGTCTATGCAAGAGGTTT+AGG - chr7_4:60783116-60783135 Msa1168160:CDS 40.0%
AGCTTACTTCACGTGGAATT+TGG - chr7_4:60783205-60783224 Msa1168160:intron 40.0%
TGAAAAACCGCGTCAAACTT+TGG - chr7_4:60783372-60783391 Msa1168160:intron 40.0%
AAACTTTGGCGAAGATGGTA+TGG - chr7_4:60783386-60783405 Msa1168160:intron 40.0%
AACTTTGGCGAAGATGGTAT+GGG - chr7_4:60783387-60783406 Msa1168160:intron 40.0%
! CAAAATGGATTTGGTTGGGA+TGG - chr7_4:60783431-60783450 Msa1168160:intron 40.0%
! CCATGCATTTTCATCTTCGA+CGG + chr7_4:60783474-60783493 None:intergenic 40.0%
AAAAGAAAAGGGAGGAAGCA+TGG + chr7_4:60783656-60783675 None:intergenic 40.0%
CAGACTTGTGTAAGGAATCA+TGG + chr7_4:60783882-60783901 None:intergenic 40.0%
GGTATTATATACGGGTAGGA+TGG + chr7_4:60783919-60783938 None:intergenic 40.0%
!! TAGAGGGGGGTATTATATAC+GGG + chr7_4:60783927-60783946 None:intergenic 40.0%
TCATGTGATTCTGTTAGAGG+GGG + chr7_4:60783941-60783960 None:intergenic 40.0%
GTCATGTGATTCTGTTAGAG+GGG + chr7_4:60783942-60783961 None:intergenic 40.0%
GGTCATGTGATTCTGTTAGA+GGG + chr7_4:60783943-60783962 None:intergenic 40.0%
GGTTAGTGATGTGTCATATG+GGG + chr7_4:60783964-60783983 None:intergenic 40.0%
TGCATATCCAAGAAGAGAGT+GGG + chr7_4:60784009-60784028 None:intergenic 40.0%
ATGCATATCCAAGAAGAGAG+TGG + chr7_4:60784010-60784029 None:intergenic 40.0%
TGGTCCCTTAACTTAATTGC+AGG + chr7_4:60784485-60784504 None:intergenic 40.0%
TCTGGATTGTTATAGCTACG+GGG - chr7_4:60784631-60784650 Msa1168160:intron 40.0%
!!! GCCATGGTTTATTTTGGTTG+TGG - chr7_4:60784685-60784704 Msa1168160:intron 40.0%
TGTGCTAAAGATAAAGGAGG+TGG - chr7_4:60784945-60784964 Msa1168160:five_prime_UTR 40.0%
AGTAGAACGTGCAGTTAATG+TGG - chr7_4:60784974-60784993 Msa1168160:five_prime_UTR 40.0%
GGAAGGAAATACTCCAAAAG+AGG - chr7_4:60785205-60785224 Msa1168160:intron 40.0%
! AACACTTCTTGCACCTCTTT+TGG + chr7_4:60785221-60785240 None:intergenic 40.0%
TAGAAATCCCGGACTTACAA+AGG - chr7_4:60785604-60785623 Msa1168160:intron 40.0%
TAGGATTCCTTTGTAAGTCC+GGG + chr7_4:60785614-60785633 None:intergenic 40.0%
CTAGGATTCCTTTGTAAGTC+CGG + chr7_4:60785615-60785634 None:intergenic 40.0%
GATTGCATTGTAGGCTCAAT+AGG - chr7_4:60785657-60785676 Msa1168160:intron 40.0%
TCACTAGTGCTCTTGTTAGT+TGG - chr7_4:60785863-60785882 Msa1168160:intron 40.0%
TTTGTGCAGTTGACGATTGA+AGG - chr7_4:60785947-60785966 Msa1168160:intron 40.0%
TGAAGGATGATAACTTGAGC+TGG - chr7_4:60785964-60785983 Msa1168160:intron 40.0%
! TCTGTATACCGCATTTGTTG+CGG - chr7_4:60786002-60786021 Msa1168160:intron 40.0%
TGCGGGAATTATTACACCTT+TGG - chr7_4:60786020-60786039 Msa1168160:intron 40.0%
AGAGAGAGAGAGAGAGAGAT+GGG + chr7_4:60780185-60780204 None:intergenic 45.0%
AAAAGAGAGACCAGGGAAGT+AGG - chr7_4:60780688-60780707 Msa1168160:intron 45.0%
AAAGAGAGACCAGGGAAGTA+GGG - chr7_4:60780689-60780708 Msa1168160:intron 45.0%
CAAACAAATCCCTACTTCCC+TGG + chr7_4:60780701-60780720 None:intergenic 45.0%
! TTTTGGTCCCTGAATGTACG+CGG + chr7_4:60780759-60780778 None:intergenic 45.0%
CGTACATTCAGGGACCAAAA+TGG - chr7_4:60780759-60780778 Msa1168160:intron 45.0%
! TAAGTTGTTTCAGACCCTGC+TGG - chr7_4:60780873-60780892 Msa1168160:intron 45.0%
CGTAGTTAGTGTTATCCAGC+AGG + chr7_4:60780891-60780910 None:intergenic 45.0%
GTTACTTGCAGCTTTCTTGG+CGG - chr7_4:60781274-60781293 Msa1168160:CDS 45.0%
TTGTGCTTCGTGTATGTGCT+AGG - chr7_4:60781634-60781653 Msa1168160:intron 45.0%
CTATGCGATTCATCTTACGG+AGG - chr7_4:60781716-60781735 Msa1168160:intron 45.0%
TGGCGGAGAGAATGTTGTAT+TGG - chr7_4:60781936-60781955 Msa1168160:intron 45.0%
! TCGTTGATGGGTGCAAAAGA+AGG - chr7_4:60781987-60782006 Msa1168160:intron 45.0%
CTCGAGAATCTCCTCCATAA+TGG + chr7_4:60782249-60782268 None:intergenic 45.0%
ATGCAAGAGCTTACTTCACG+TGG - chr7_4:60783198-60783217 Msa1168160:intron 45.0%
CTTCACGTGGAATTTGGACA+TGG - chr7_4:60783211-60783230 Msa1168160:intron 45.0%
ATCTTCGCCAAAGTTTGACG+CGG + chr7_4:60783382-60783401 None:intergenic 45.0%
CCGTCGAAGATGAAAATGCA+TGG - chr7_4:60783471-60783490 Msa1168160:intron 45.0%
CATGGCACGGATCAGAATAA+AGG + chr7_4:60783638-60783657 None:intergenic 45.0%
! AGGGCATTCAGACTTGTGTA+AGG + chr7_4:60783890-60783909 None:intergenic 45.0%
CATGTGATTCTGTTAGAGGG+GGG + chr7_4:60783940-60783959 None:intergenic 45.0%
GGGTCATGTGATTCTGTTAG+AGG + chr7_4:60783944-60783963 None:intergenic 45.0%
GCATATCCAAGAAGAGAGTG+GGG + chr7_4:60784008-60784027 None:intergenic 45.0%
GGGTCTTAGGTCATGTTTGT+TGG - chr7_4:60784584-60784603 Msa1168160:intron 45.0%
CTGGATTGTTATAGCTACGG+GGG - chr7_4:60784632-60784651 Msa1168160:intron 45.0%
!!! GCTTCTATGTTTTGAGACCG+AGG - chr7_4:60785374-60785393 Msa1168160:intron 45.0%
! CTGTATACCGCATTTGTTGC+GGG - chr7_4:60786003-60786022 Msa1168160:intron 45.0%
CAACTACTAAATTCGGGGGT+TGG + chr7_4:60786135-60786154 None:intergenic 45.0%
!!! ATGATATTTTATTTATTTAA+TGG - chr7_4:60782333-60782352 Msa1168160:intron 5.0%
!! AAATGAAATAAAAAAAATAA+AGG - chr7_4:60784447-60784466 Msa1168160:intron 5.0%
AACTCTCCTCCGTACTCTCT+CGG - chr7_4:60780156-60780175 Msa1168160:three_prime_UTR 50.0%
GGCGAAGACGAAGTAGTTGA+AGG + chr7_4:60780241-60780260 None:intergenic 50.0%
TTCGTCTTCGCCTGTTCTTC+TGG - chr7_4:60780249-60780268 Msa1168160:three_prime_UTR 50.0%
AGAGAGAGAGAGAGAGATGG+GGG + chr7_4:60780294-60780313 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGATG+GGG + chr7_4:60780295-60780314 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+TGG + chr7_4:60780186-60780205 None:intergenic 50.0%
! AGCGTGGTGTTGGGAAACTA+GGG + chr7_4:60780350-60780369 None:intergenic 50.0%
! AAGCGTGGTGTTGGGAAACT+AGG + chr7_4:60780351-60780370 None:intergenic 50.0%
CACTCCATGTGAGTGCTATG+CGG - chr7_4:60780944-60780963 Msa1168160:CDS 50.0%
ACTCCATGTGAGTGCTATGC+GGG - chr7_4:60780945-60780964 Msa1168160:CDS 50.0%
TGCGATTCATCTTACGGAGG+TGG - chr7_4:60781719-60781738 Msa1168160:intron 50.0%
GGCTTACCTCTCTCGTTGAT+GGG - chr7_4:60781975-60781994 Msa1168160:intron 50.0%
TTTGCACCCATCAACGAGAG+AGG + chr7_4:60781984-60782003 None:intergenic 50.0%
! TTTGGAGCCTCTCGAAAACG+TGG - chr7_4:60782074-60782093 Msa1168160:intron 50.0%
TTGGAGCCTCTCGAAAACGT+GGG - chr7_4:60782075-60782094 Msa1168160:intron 50.0%
!! CATCAACCCACGTTTTCGAG+AGG + chr7_4:60782084-60782103 None:intergenic 50.0%
GGAGTTGTCCTTCAAGTGCA+AGG - chr7_4:60782525-60782544 Msa1168160:intron 50.0%
AGGTTTAGGCCGCAAGACAA+AGG - chr7_4:60783130-60783149 Msa1168160:CDS 50.0%
GGTTTAGGCCGCAAGACAAA+GGG - chr7_4:60783131-60783150 Msa1168160:CDS 50.0%
CATGGAGCGTGTATTAGCTG+AGG - chr7_4:60783229-60783248 Msa1168160:intron 50.0%
AGTTTGGGTCGCCAGACTAA+CGG - chr7_4:60783269-60783288 Msa1168160:intron 50.0%
GTCGCCAGACTAACGGAATT+TGG - chr7_4:60783276-60783295 Msa1168160:intron 50.0%
GCGTCAAACTTTGGCGAAGA+TGG - chr7_4:60783381-60783400 Msa1168160:intron 50.0%
! AAAAGGGAGGAAGCATGGCA+CGG + chr7_4:60783651-60783670 None:intergenic 50.0%
ACACCAGTGTAGAGGAAGCA+TGG + chr7_4:60783692-60783711 None:intergenic 50.0%
!! GGGGGGTATTATATACGGGT+AGG + chr7_4:60783923-60783942 None:intergenic 50.0%
CCATGTGGGAGAGAATGAGT+TGG + chr7_4:60783985-60784004 None:intergenic 50.0%
CCAACTCATTCTCTCCCACA+TGG - chr7_4:60783982-60784001 Msa1168160:intron 50.0%
GTTTGTGGGCAAAAAAGGCC+AGG - chr7_4:60784786-60784805 Msa1168160:intron 50.0%
CGTAGGTCTCGTAGAAATCC+CGG - chr7_4:60785593-60785612 Msa1168160:intron 50.0%
TACGGAGGAGAGTTGCAGCA+AGG + chr7_4:60780150-60780169 None:intergenic 55.0%
GATCGAGCTCCGAGAGAGTA+CGG + chr7_4:60780168-60780187 None:intergenic 55.0%
GAGAGAGAGAGAGAGATGGG+GGG + chr7_4:60780293-60780312 None:intergenic 55.0%
TCACAACGCCGCGTACATTC+AGG - chr7_4:60780748-60780767 Msa1168160:intron 55.0%
CACAACGCCGCGTACATTCA+GGG - chr7_4:60780749-60780768 Msa1168160:intron 55.0%
CTCCATGTGAGTGCTATGCG+GGG - chr7_4:60780946-60780965 Msa1168160:CDS 55.0%
GGGCTTACCTCTCTCGTTGA+TGG - chr7_4:60781974-60781993 Msa1168160:intron 55.0%
ACGGGTAGGATGGTGTGTGA+GGG + chr7_4:60783909-60783928 None:intergenic 55.0%
TACGGGTAGGATGGTGTGTG+AGG + chr7_4:60783910-60783929 None:intergenic 55.0%
AGAAGAGAGTGGGGCCATGT+GGG + chr7_4:60783999-60784018 None:intergenic 55.0%
AAGAAGAGAGTGGGGCCATG+TGG + chr7_4:60784000-60784019 None:intergenic 55.0%
ACATGGCCCCACTCTCTTCT+TGG - chr7_4:60783999-60784018 Msa1168160:intron 55.0%
GAGAGAGAGATGGGGGGAGA+GGG + chr7_4:60780287-60780306 None:intergenic 60.0%
AGAGAGAGAGATGGGGGGAG+AGG + chr7_4:60780288-60780307 None:intergenic 60.0%
TGCCCCGCATAGCACTCACA+TGG + chr7_4:60780951-60780970 None:intergenic 60.0%
GCGCCATGCTTCCTCTACAC+TGG - chr7_4:60783686-60783705 Msa1168160:intron 60.0%
! CGAGCTCCGAGAGAGTACGG+AGG + chr7_4:60780165-60780184 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 60780115 60786197 60780115 ID=Msa1168160;Name=Msa1168160
chr7_4 mRNA 60780115 60786197 60780115 ID=Msa1168160-mRNA-1;Parent=Msa1168160;Name=Msa1168160-mRNA-1;_AED=0.03;_eAED=0.03;_QI=243|1|1|1|0.25|0|5|249|304
chr7_4 exon 60780115 60780356 60780115 ID=Msa1168160-mRNA-1:exon:19077;Parent=Msa1168160-mRNA-1
chr7_4 exon 60780917 60781433 60780917 ID=Msa1168160-mRNA-1:exon:19076;Parent=Msa1168160-mRNA-1
chr7_4 exon 60782804 60783210 60782804 ID=Msa1168160-mRNA-1:exon:19075;Parent=Msa1168160-mRNA-1
chr7_4 exon 60784943 60785027 60784943 ID=Msa1168160-mRNA-1:exon:19074;Parent=Msa1168160-mRNA-1
chr7_4 exon 60786042 60786197 60786042 ID=Msa1168160-mRNA-1:exon:19073;Parent=Msa1168160-mRNA-1
chr7_4 five_prime_UTR 60786042 60786197 60786042 ID=Msa1168160-mRNA-1:five_prime_utr;Parent=Msa1168160-mRNA-1
chr7_4 five_prime_UTR 60784943 60785027 60784943 ID=Msa1168160-mRNA-1:five_prime_utr;Parent=Msa1168160-mRNA-1
chr7_4 five_prime_UTR 60783209 60783210 60783209 ID=Msa1168160-mRNA-1:five_prime_utr;Parent=Msa1168160-mRNA-1
chr7_4 CDS 60782804 60783208 60782804 ID=Msa1168160-mRNA-1:cds;Parent=Msa1168160-mRNA-1
chr7_4 CDS 60780924 60781433 60780924 ID=Msa1168160-mRNA-1:cds;Parent=Msa1168160-mRNA-1
chr7_4 three_prime_UTR 60780917 60780923 60780917 ID=Msa1168160-mRNA-1:three_prime_utr;Parent=Msa1168160-mRNA-1
chr7_4 three_prime_UTR 60780115 60780356 60780115 ID=Msa1168160-mRNA-1:three_prime_utr;Parent=Msa1168160-mRNA-1
Gene Sequence

>Msa1168160

ATGAATTCTAGTCTAGTCTATGCAAGAGGTTTAGGCCGCAAGACAAAGGGAAAAAGAAAGATGGAAGATAGCAATATTTGGGTTAAGAAAGAGGATGCAAGAGCTTACTTCACGTGGAATTTGGACATGGAGCGTGTATTAGCTGAGGCACTTAGAGATCAAAGAAGTTTGGGTCGCCAGACTAACGGAATTTGGAAAACAGAAGCATACAAAGCTGCAGCTGATGTGTTGTCGACACGTTTTAATGTTCAGCTTATCGGAGAGAATGTGAAAAACCGCGTCAAACTTTGGCGAAGATGGTATGGGATAGTTAATGATATTCTAAGTCAAAATGGATTTGGTTGGGATGGCACAAACTGTATGATTACCGTCGAAGATGAAAATGCATGGAATGAATATGTCAAGTCTCATGAAGAAGCCAAACGATTCCGATTTAAGATCATTCTAAATTGGAATGACATTGTAGATATATGTGCTAAAGATAAAGGAGGTGGAATTCAAGTAGAACGTGCAGTTAATGTGGATGATGTCACGAGCAAAGATGCAAATGTAGATGAAGATGAAGAAGGTTCCAATGAGTATATTGATTTAGAGAAACCAAGTTCTGCAACAAAGAAAAAAGTACAATGTACCTGTGCCAATAAGGGTAGAGACAAAGAGGGGATGATCGACTCTATGAGAGAAGTTGCTGAGATATTGAAAGACTTTGTACAAATTAGTAAAAAAAGGATGGAAGGAAATACTCCAAAAGAGGTGCAAGAAGTGTTGAATGAAATGGAGATGATTATTGATATTGATGACACACTCCGCTATAAAGCAATCAATTGGTTGATTGACAATCCAAACAAAATAGCGATTCTCAAAGCTCTTCCGTTGAGTGAGAAAAAGAAGTATCTAATGGCTTCTATGTTTTGA

Protein sequence

>Msa1168160

MNSSLVYARGLGRKTKGKRKMEDSNIWVKKEDARAYFTWNLDMERVLAEALRDQRSLGRQTNGIWKTEAYKAAADVLSTRFNVQLIGENVKNRVKLWRRWYGIVNDILSQNGFGWDGTNCMITVEDENAWNEYVKSHEEAKRFRFKIILNWNDIVDICAKDKGGGIQVERAVNVDDVTSKDANVDEDEEGSNEYIDLEKPSSATKKKVQCTCANKGRDKEGMIDSMREVAEILKDFVQISKKRMEGNTPKEVQEVLNEMEMIIDIDDTLRYKAINWLIDNPNKIAILKALPLSEKKKYLMASMF*