Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0608370 | XP_003607491.2 | 96.083 | 868 | 24 | 1 | 1 | 858 | 1 | 868 | 0.0 | 1704 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0608370 | sp|Q5BH88|SPB1_EMENI | 37.695 | 833 | 449 | 27 | 1 | 801 | 1 | 795 | 5.23e-141 | 440 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037770 | Msa0608370 | 0.839734 | 1.327606e-57 | -8.615850e-47 |
| Msa0076780 | Msa0608370 | 0.824916 | 6.227779e-54 | -8.615850e-47 |
| Msa0091560 | Msa0608370 | 0.809816 | 1.569412e-50 | -8.615850e-47 |
| Msa0115130 | Msa0608370 | 0.828318 | 9.610529e-55 | -8.615850e-47 |
| Msa0118590 | Msa0608370 | 0.802890 | 4.525965e-49 | -8.615850e-47 |
| Msa0605000 | Msa0608370 | 0.826294 | 2.935829e-54 | -8.615850e-47 |
| Msa0608370 | Msa0658590 | 0.815319 | 9.825612e-52 | -8.615850e-47 |
| Msa0608370 | Msa0685140 | 0.831153 | 1.962121e-55 | -8.615850e-47 |
| Msa0608370 | Msa0691290 | 0.876095 | 1.832988e-68 | -8.615850e-47 |
| Msa0608370 | Msa0711780 | 0.801675 | 8.049826e-49 | -8.615850e-47 |
| Msa0608370 | Msa0763330 | 0.805372 | 1.378411e-49 | -8.615850e-47 |
| Msa0608370 | Msa0794670 | 0.801189 | 1.012413e-48 | -8.615850e-47 |
| Msa0608370 | Msa0880040 | 0.805128 | 1.549901e-49 | -8.615850e-47 |
| Msa0608370 | Msa0945440 | 0.833002 | 6.846969e-56 | -8.615850e-47 |
| Msa0608370 | Msa1029070 | 0.815697 | 8.096495e-52 | -8.615850e-47 |
| Msa0608370 | Msa1072600 | 0.800917 | 1.150897e-48 | -8.615850e-47 |
| Msa0608370 | Msa1129690 | 0.804396 | 2.204109e-49 | -8.615850e-47 |
| Msa0608370 | Msa1132480 | 0.803255 | 3.803820e-49 | -8.615850e-47 |
| Msa0608370 | Msa1156160 | 0.806694 | 7.262777e-50 | -8.615850e-47 |
| Msa0608370 | Msa1209200 | 0.829764 | 4.288684e-55 | -8.615850e-47 |
| Msa0608370 | Msa1209760 | 0.815270 | 1.007640e-51 | -8.615850e-47 |
| Msa0608370 | Msa1219170 | 0.802393 | 5.732463e-49 | -8.615850e-47 |
| Msa0608370 | Msa1226470 | 0.812603 | 3.901881e-51 | -8.615850e-47 |
| Msa0608370 | Msa1385810 | 0.823618 | 1.257020e-53 | -8.615850e-47 |
| Msa0608370 | Msa1400580 | 0.801153 | 1.029801e-48 | -8.615850e-47 |
| Msa0608370 | Msa1409260 | 0.817227 | 3.678105e-52 | -8.615850e-47 |
| Msa0608370 | Msa1446780 | 0.805977 | 1.028423e-49 | -8.615850e-47 |
| Msa0127020 | Msa0608370 | 0.814988 | 1.163523e-51 | -8.615850e-47 |
| Msa0146770 | Msa0608370 | 0.800976 | 1.119283e-48 | -8.615850e-47 |
| Msa0163760 | Msa0608370 | 0.800525 | 1.383496e-48 | -8.615850e-47 |
| Msa0169280 | Msa0608370 | 0.814130 | 1.801491e-51 | -8.615850e-47 |
| Msa0202410 | Msa0608370 | 0.831523 | 1.590482e-55 | -8.615850e-47 |
| Msa0403500 | Msa0608370 | 0.834872 | 2.331660e-56 | -8.615850e-47 |
| Msa0430060 | Msa0608370 | 0.800839 | 1.193954e-48 | -8.615850e-47 |
| Msa0430150 | Msa0608370 | 0.800747 | 1.246693e-48 | -8.615850e-47 |
| Msa0245430 | Msa0608370 | 0.845450 | 4.030503e-59 | -8.615850e-47 |
| Msa0270210 | Msa0608370 | 0.804802 | 1.813520e-49 | -8.615850e-47 |
| Msa0309750 | Msa0608370 | 0.804656 | 1.945784e-49 | -8.615850e-47 |
| Msa0527360 | Msa0608370 | 0.810802 | 9.618737e-51 | -8.615850e-47 |
| Msa0542090 | Msa0608370 | 0.827124 | 1.860208e-54 | -8.615850e-47 |
| Msa0542130 | Msa0608370 | 0.825670 | 4.129444e-54 | -8.615850e-47 |
| Msa0554290 | Msa0608370 | 0.852997 | 3.197037e-61 | -8.615850e-47 |
| Msa0581280 | Msa0608370 | 0.828880 | 7.031388e-55 | -8.615850e-47 |
| Msa0588090 | Msa0608370 | 0.800752 | 1.243745e-48 | -8.615850e-47 |
| Msa0601150 | Msa0608370 | 0.802628 | 5.126986e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0608370 | MtrunA17_Chr4g0040381 | 96.083 | 868 | 24 | 1 | 1 | 858 | 1 | 868 | 0.0 | 1704 |
| Msa0608370 | MtrunA17_Chr4g0035141 | 77.907 | 860 | 84 | 11 | 1 | 858 | 1 | 756 | 0.0 | 1269 |
| Msa0608370 | MtrunA17_Chr2g0282131 | 32.636 | 239 | 139 | 7 | 1 | 226 | 1 | 230 | 4.83e-33 | 130 |
| Msa0608370 | MtrunA17_Chr5g0435361 | 27.155 | 232 | 113 | 4 | 13 | 199 | 8 | 228 | 1.61e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0608370 | AT4G25730.1 | 60.833 | 840 | 303 | 11 | 4 | 838 | 2 | 820 | 0.0 | 947 |
| Msa0608370 | AT5G01230.1 | 33.473 | 239 | 137 | 7 | 1 | 226 | 1 | 230 | 1.40e-34 | 135 |
| Msa0608370 | AT5G13830.1 | 29.204 | 226 | 107 | 6 | 13 | 199 | 8 | 219 | 6.14e-15 | 75.5 |
| Msa0608370 | AT5G01230.2 | 48.333 | 60 | 28 | 1 | 1 | 60 | 1 | 57 | 1.06e-11 | 61.2 |
Find 231 sgRNAs with CRISPR-Local
Find 486 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGAAGATTTGAGGGTTT+TGG | 0.069653 | 4_2:-55363599 | Msa0608370:CDS |
| ATCTGCTGAGATATATATTT+TGG | 0.117981 | 4_2:-55364434 | Msa0608370:CDS |
| ATCTTCATCTGAATCATATT+TGG | 0.153647 | 4_2:+55360795 | None:intergenic |
| TCGAGGCGCGATTGCTATTC+AGG | 0.166197 | 4_2:-55365483 | Msa0608370:CDS |
| CAGACGAAATCAATCAAATT+TGG | 0.171707 | 4_2:+55359588 | None:intergenic |
| GGGATTGCCCAAGTGGTTTC+TGG | 0.182660 | 4_2:-55360299 | Msa0608370:CDS |
| GCCTCAGCCACCTTCTTTGC+AGG | 0.204831 | 4_2:+55360184 | None:intergenic |
| CTCCCAATGTTGGTGGTGCT+TGG | 0.262237 | 4_2:-55365367 | Msa0608370:CDS |
| TGATGCAGACTCCCAACTTT+TGG | 0.277133 | 4_2:-55361387 | Msa0608370:CDS |
| AGGAAAATCATGAATGAAAA+TGG | 0.282110 | 4_2:-55365425 | Msa0608370:CDS |
| GGATTCGAGGAAATGGAATT+TGG | 0.294730 | 4_2:+55365622 | None:intergenic |
| AGAACGGTAACCGTGTTCTT+TGG | 0.300601 | 4_2:+55365676 | None:intergenic |
| AAAATACCTCTTCAGTTGTT+AGG | 0.308107 | 4_2:+55363759 | None:intergenic |
| TTCTGCTAACAACGGTATAT+TGG | 0.308446 | 4_2:+55359528 | None:intergenic |
| GAATCATCGGAATCAGTTTC+AGG | 0.310507 | 4_2:+55360454 | None:intergenic |
| AATCTCAAAATCCATTTCAT+TGG | 0.329088 | 4_2:+55360486 | None:intergenic |
| CTAACTCTAGATTTACATTC+AGG | 0.329912 | 4_2:+55365446 | None:intergenic |
| AACACGCTTCTTCCGTGCTT+TGG | 0.332263 | 4_2:+55360162 | None:intergenic |
| TTTGCTTTACCCATTGTTGA+TGG | 0.336864 | 4_2:+55365740 | None:intergenic |
| GACAAGGCACGGAAAGCAAC+AGG | 0.340405 | 4_2:-55362925 | Msa0608370:CDS |
| GGAAGGAAATAACTGAAAAT+AGG | 0.342149 | 4_2:-55359758 | Msa0608370:exon |
| AAATCAATCAAATTTGGAAT+AGG | 0.347043 | 4_2:+55359594 | None:intergenic |
| TCCCAATGTTGGTGGTGCTT+GGG | 0.351691 | 4_2:-55365366 | Msa0608370:CDS |
| GATACTCCTCTGGAGATTCT+TGG | 0.360047 | 4_2:-55363839 | Msa0608370:CDS |
| TCTTTCGTGACAGGCTTAAC+TGG | 0.364894 | 4_2:+55360253 | None:intergenic |
| TTTGGTGCCTTGCCACCCTT+TGG | 0.370317 | 4_2:+55359863 | None:intergenic |
| CTCGAAGCCCTGCTACCCTT+TGG | 0.370620 | 4_2:+55359791 | None:intergenic |
| ATTCTGACGAAGAACGTAAA+AGG | 0.372662 | 4_2:-55361867 | Msa0608370:intron |
| GCAAGGCACCAAAGGGTGGC+AGG | 0.375410 | 4_2:-55359853 | Msa0608370:CDS |
| ATCTCTCTCTGAAGATTTGA+GGG | 0.375564 | 4_2:-55363605 | Msa0608370:CDS |
| GCAAGGCACCAAAGGGTAGC+AGG | 0.377332 | 4_2:-55359799 | Msa0608370:CDS |
| ATCTAAAGCATCCAATGAAA+TGG | 0.378752 | 4_2:-55360497 | Msa0608370:CDS |
| AGCTGGATCAGTAAAGCTTA+TGG | 0.381413 | 4_2:+55363805 | None:intergenic |
| CTCGATCTCTGCGCCGCCCC+TGG | 0.387074 | 4_2:-55365587 | Msa0608370:CDS |
| TCAAGAAGCAAATCCTTTGA+TGG | 0.387985 | 4_2:-55360764 | Msa0608370:CDS |
| CTCGGAGCCCTGCCACCCTT+TGG | 0.388717 | 4_2:+55359845 | None:intergenic |
| CCCGTCGATCATCTCGTTAT+CGG | 0.389719 | 4_2:-55365533 | Msa0608370:CDS |
| TCGGTCAATTTGCTTACTCT+TGG | 0.391521 | 4_2:+55360066 | None:intergenic |
| CTGAATGTAAATCTAGAGTT+AGG | 0.399356 | 4_2:-55365445 | Msa0608370:CDS |
| CACAAATATGTGGTTTAGTC+AGG | 0.399550 | 4_2:-55360701 | Msa0608370:CDS |
| TTCCCTTACCAGCCTTAACT+TGG | 0.400366 | 4_2:+55359981 | None:intergenic |
| TGACTTGCCACCCTTTGCCT+TGG | 0.405743 | 4_2:+55359886 | None:intergenic |
| TTGTTACTGACTGCTATAGA+TGG | 0.406985 | 4_2:-55359664 | Msa0608370:three_prime_UTR |
| TCCGAGTGGCAAGGTTCCTA+TGG | 0.410275 | 4_2:-55359828 | Msa0608370:CDS |
| GAGATTGAAGTTGAAGGAGG+AGG | 0.419575 | 4_2:+55365775 | None:intergenic |
| AGCGTGAGGATTCGAGGAAA+TGG | 0.422603 | 4_2:+55365615 | None:intergenic |
| AAGTTGGGAGTCTGCATCAT+AGG | 0.427509 | 4_2:+55361391 | None:intergenic |
| TTTGATGTTATTCTTCATGA+TGG | 0.436220 | 4_2:-55365392 | Msa0608370:CDS |
| ACATATTTGTGATCTCCTCT+TGG | 0.436244 | 4_2:+55360713 | None:intergenic |
| GCAACATCCTCTTTCGTGAC+AGG | 0.437692 | 4_2:+55360244 | None:intergenic |
| CATATTTGTGATCTCCTCTT+GGG | 0.439598 | 4_2:+55360714 | None:intergenic |
| TCTGCGCCGCCCCTGGTGGT+TGG | 0.440122 | 4_2:-55365580 | Msa0608370:CDS |
| TTCCTCATCCAGAAACCACT+TGG | 0.441265 | 4_2:+55360291 | None:intergenic |
| GTTAGGTCATGATCCTTGAT+TGG | 0.441802 | 4_2:+55363776 | None:intergenic |
| GCCCAAGTGGTTTCTGGATG+AGG | 0.441943 | 4_2:-55360293 | Msa0608370:CDS |
| TTAGCAGAAACAGTTAGAAA+TGG | 0.442117 | 4_2:-55359514 | Msa0608370:three_prime_UTR |
| CTCAGCTGTAGCAGCAGGTT+CGG | 0.442527 | 4_2:+55363354 | None:intergenic |
| AATCTCTCTCTGAAGATTTG+AGG | 0.449497 | 4_2:-55363606 | Msa0608370:CDS |
| AAGAGTGATGCGAGGAAAAG+TGG | 0.451838 | 4_2:-55359935 | Msa0608370:CDS |
| GTTATTTAGTAATTGATTGT+GGG | 0.453899 | 4_2:-55359553 | Msa0608370:three_prime_UTR |
| TCCACCTCAGCTGTAGCAGC+AGG | 0.454303 | 4_2:+55363349 | None:intergenic |
| TGATAGAATACTCAACGAAA+TGG | 0.455129 | 4_2:-55363299 | Msa0608370:CDS |
| GGGTGGTGGCAAGGCACCAA+AGG | 0.456676 | 4_2:-55359807 | Msa0608370:CDS |
| GGATGACAGCGAGAATGAAA+TGG | 0.459874 | 4_2:-55360638 | Msa0608370:CDS |
| AGATTGAAGTTGAAGGAGGA+GGG | 0.462785 | 4_2:+55365776 | None:intergenic |
| AACCAGATATGATGAACAAA+TGG | 0.466646 | 4_2:-55361495 | Msa0608370:intron |
| GAGAATGAAATGGATATTGA+TGG | 0.467141 | 4_2:-55360628 | Msa0608370:CDS |
| TTTACCCATTGTTGATGGAT+TGG | 0.471303 | 4_2:+55365745 | None:intergenic |
| TCCTTGATTGGTATATCAGC+TGG | 0.474319 | 4_2:+55363788 | None:intergenic |
| TGATGCGAGGAAAAGTGGTA+TGG | 0.476078 | 4_2:-55359930 | Msa0608370:CDS |
| GAAGAAAGGGGTCCAAGTTA+AGG | 0.476561 | 4_2:-55359993 | Msa0608370:CDS |
| ATGCAGATGGTGGATGTACT+TGG | 0.476660 | 4_2:-55364239 | Msa0608370:intron |
| AGCTCCATACCTCCAAAAGT+TGG | 0.477483 | 4_2:+55361375 | None:intergenic |
| GCGCCTCGAAGTGGTTTAAT+CGG | 0.478159 | 4_2:+55365497 | None:intergenic |
| ATGCGAGGATCAATCTTAGC+AGG | 0.479923 | 4_2:+55364394 | None:intergenic |
| GAAGAAGAGATTGAAGTTGA+AGG | 0.481024 | 4_2:+55365769 | None:intergenic |
| CAGGGCTTCGAGCGGCAAGA+AGG | 0.483101 | 4_2:-55359780 | Msa0608370:CDS |
| GAGGAAAAGTGGTATGGGTA+AGG | 0.487792 | 4_2:-55359924 | Msa0608370:CDS |
| GAGTATGTAGTTGCGAAGAA+AGG | 0.489463 | 4_2:-55360007 | Msa0608370:CDS |
| AGCCCAAGCACCACCAACAT+TGG | 0.491668 | 4_2:+55365364 | None:intergenic |
| AGTATGTAGTTGCGAAGAAA+GGG | 0.494237 | 4_2:-55360006 | Msa0608370:CDS |
| TCCAGCTGATATACCAATCA+AGG | 0.495100 | 4_2:-55363789 | Msa0608370:CDS |
| AGCAAAAGAGGCATCGTGAC+GGG | 0.496805 | 4_2:-55364208 | Msa0608370:intron |
| GCCCAAGCACCACCAACATT+GGG | 0.496890 | 4_2:+55365365 | None:intergenic |
| ATATGATTCAGATGAAGATC+AGG | 0.497095 | 4_2:-55360791 | Msa0608370:CDS |
| TTCACCAATCCATCAACAAT+GGG | 0.499075 | 4_2:-55365749 | Msa0608370:exon |
| TTGGTAACAAAAGTTCCCTT+AGG | 0.503952 | 4_2:+55365275 | None:intergenic |
| TTTGTGATCTCCTCTTGGGT+GGG | 0.504064 | 4_2:+55360718 | None:intergenic |
| TTGGAAACAATAAGCAAAAG+AGG | 0.505563 | 4_2:-55364220 | Msa0608370:CDS |
| TAAGTACATGTTTGATGACC+AGG | 0.505574 | 4_2:-55360320 | Msa0608370:CDS |
| ACCTGCAAAGAAGGTGGCTG+AGG | 0.505683 | 4_2:-55360185 | Msa0608370:CDS |
| ATTTGTGATCTCCTCTTGGG+TGG | 0.505793 | 4_2:+55360717 | None:intergenic |
| GCTCCATACCTCCAAAAGTT+GGG | 0.507010 | 4_2:+55361376 | None:intergenic |
| AGGAAAAGTGGTATGGGTAA+GGG | 0.507350 | 4_2:-55359923 | Msa0608370:CDS |
| ATGGGTAAAGCAAAAGCAAA+AGG | 0.507777 | 4_2:-55365731 | Msa0608370:CDS |
| TCTGTAAGTGGCACCATCAA+AGG | 0.508040 | 4_2:+55360751 | None:intergenic |
| TTGGAACGATCAGATATGTC+TGG | 0.508899 | 4_2:+55360085 | None:intergenic |
| TCGGAATCAGTTTCAGGTGC+AGG | 0.511470 | 4_2:+55360460 | None:intergenic |
| GTTACCGTTCTCGTGCATCA+TGG | 0.512816 | 4_2:-55365664 | Msa0608370:CDS |
| GGTCCAAGTTAAGGCTGGTA+AGG | 0.514638 | 4_2:-55359984 | Msa0608370:CDS |
| AGTTATTTAGTAATTGATTG+TGG | 0.516232 | 4_2:-55359554 | Msa0608370:three_prime_UTR |
| GAACGGAGCGTGAGGATTCG+AGG | 0.522727 | 4_2:+55365609 | None:intergenic |
| GAAAAGTCCTTGTTGATCGC+AGG | 0.524020 | 4_2:-55359961 | Msa0608370:CDS |
| GGAAATAACTGAAAATAGGT+TGG | 0.525268 | 4_2:-55359754 | Msa0608370:exon |
| CAAGGCACCAAAGGGTGGCA+GGG | 0.526098 | 4_2:-55359852 | Msa0608370:CDS |
| TTGTGCTACAGGTATGAAGA+TGG | 0.526372 | 4_2:-55363911 | Msa0608370:intron |
| ATGGGTAAGGGAGGCAAAAG+AGG | 0.527531 | 4_2:-55359911 | Msa0608370:CDS |
| ATCGACGGGAACACGTTGAA+CGG | 0.527840 | 4_2:+55365547 | None:intergenic |
| TGTTTGGACAGATACTCCTC+TGG | 0.528273 | 4_2:-55363849 | Msa0608370:CDS |
| TGATACTAGACCTGCAAAGA+AGG | 0.532383 | 4_2:-55360194 | Msa0608370:CDS |
| GCGACTTGCATCCAACCACC+AGG | 0.532806 | 4_2:+55365569 | None:intergenic |
| AAACAATTAACCTTAGCTAT+CGG | 0.534090 | 4_2:+55364334 | None:intergenic |
| GCAAACCTTCATAGAAGCAA+GGG | 0.534739 | 4_2:+55362855 | None:intergenic |
| GTGCCACTTACAGATGGTAC+AGG | 0.535287 | 4_2:-55360742 | Msa0608370:CDS |
| TGAAGGAGGAGGGTTGTGAA+TGG | 0.536612 | 4_2:+55365786 | None:intergenic |
| CAAAAGAGGTTCCAAGGCAA+AGG | 0.540250 | 4_2:-55359897 | Msa0608370:CDS |
| CTCATCAGATGATGAATCAT+CGG | 0.540432 | 4_2:+55360441 | None:intergenic |
| AATGGATATTGATGGGTTGA+AGG | 0.541609 | 4_2:-55360620 | Msa0608370:CDS |
| AAGGGTGGCAAGGCACCAAA+GGG | 0.541933 | 4_2:-55359860 | Msa0608370:CDS |
| CATGATGGTTCTCCCAATGT+TGG | 0.542545 | 4_2:-55365377 | Msa0608370:CDS |
| CCGAGTGGCAAGGTTCCTAT+GGG | 0.544249 | 4_2:-55359827 | Msa0608370:CDS |
| TGGCTGATCTGATATAGCAT+TGG | 0.544299 | 4_2:+55360105 | None:intergenic |
| CCCATAGGAACCTTGCCACT+CGG | 0.549279 | 4_2:+55359827 | None:intergenic |
| AGGGCTTCGAGCGGCAAGAA+GGG | 0.549430 | 4_2:-55359779 | Msa0608370:CDS |
| TGGCAGGGCTCCGAGTGGCA+AGG | 0.549728 | 4_2:-55359837 | Msa0608370:CDS |
| AAAGATCAAAGAAAATAAAA+CGG | 0.550124 | 4_2:-55360548 | Msa0608370:CDS |
| GGTGGTGGCAAGGCACCAAA+GGG | 0.550448 | 4_2:-55359806 | Msa0608370:CDS |
| GAAACCACTTGGGCAATCCC+TGG | 0.550706 | 4_2:+55360302 | None:intergenic |
| GCTCCGATTAAACCACTTCG+AGG | 0.551749 | 4_2:-55365500 | Msa0608370:CDS |
| GGTTCCTATGGGTGGTGGCA+AGG | 0.552395 | 4_2:-55359816 | Msa0608370:CDS |
| AAAGGGTGGCAAGGCACCAA+AGG | 0.553560 | 4_2:-55359861 | Msa0608370:CDS |
| AAGATGGAAACACAACTTTG+AGG | 0.553591 | 4_2:-55363895 | Msa0608370:CDS |
| AGTTAAGCCTGTCACGAAAG+AGG | 0.553825 | 4_2:-55360251 | Msa0608370:CDS |
| ATATAGCATTGGCCTTCTTG+CGG | 0.554799 | 4_2:+55360116 | None:intergenic |
| CAAGTCACCAAAGGGTGGCA+AGG | 0.554837 | 4_2:-55359870 | Msa0608370:CDS |
| AGCAAACCTTCATAGAAGCA+AGG | 0.555182 | 4_2:+55362854 | None:intergenic |
| TGTCTTTGCTGAAGCTGTAG+AGG | 0.557186 | 4_2:-55360677 | Msa0608370:CDS |
| GGCAAGGTTCCTATGGGTGG+TGG | 0.558236 | 4_2:-55359821 | Msa0608370:CDS |
| GAAGAGATTGAAGTTGAAGG+AGG | 0.559626 | 4_2:+55365772 | None:intergenic |
| CTTAGCATAAGCTAGTATCT+CGG | 0.562708 | 4_2:+55360393 | None:intergenic |
| ATAGCAATCGCGCCTCGAAG+TGG | 0.563885 | 4_2:+55365488 | None:intergenic |
| CTTCACCAATCCATCAACAA+TGG | 0.564706 | 4_2:-55365750 | Msa0608370:exon |
| TGAAGGTGGTGAGGGTGAAG+TGG | 0.564875 | 4_2:-55361947 | Msa0608370:CDS |
| GATGCGAGGAAAAGTGGTAT+GGG | 0.568839 | 4_2:-55359929 | Msa0608370:CDS |
| GGCCCTGTACCATCTGTAAG+TGG | 0.570155 | 4_2:+55360739 | None:intergenic |
| AAGGGTGGCAAGTCACCAAA+GGG | 0.571241 | 4_2:-55359878 | Msa0608370:CDS |
| ACCTGCTGCTACAGCTGAGG+TGG | 0.572033 | 4_2:-55363350 | Msa0608370:CDS |
| GGTGGCAAGGCACCAAAGGG+TGG | 0.575449 | 4_2:-55359857 | Msa0608370:CDS |
| GGTGCCTTGCCACCACCCAT+AGG | 0.577847 | 4_2:+55359812 | None:intergenic |
| AAAAGAGGTTCCAAGGCAAA+GGG | 0.578732 | 4_2:-55359896 | Msa0608370:CDS |
| TGGCCTTACAGGACAAGGCA+CGG | 0.579315 | 4_2:-55362936 | Msa0608370:intron |
| TCCTCATCCAGAAACCACTT+GGG | 0.580501 | 4_2:+55360292 | None:intergenic |
| GATGGTTCTCCCAATGTTGG+TGG | 0.580953 | 4_2:-55365374 | Msa0608370:CDS |
| GTTTCCATGATGCACGAGAA+CGG | 0.581399 | 4_2:+55365660 | None:intergenic |
| CAAGGCACCAAAGGGTAGCA+GGG | 0.582161 | 4_2:-55359798 | Msa0608370:CDS |
| CTTCGAGCGGCAAGAAGGGA+AGG | 0.582228 | 4_2:-55359775 | Msa0608370:CDS |
| TCCGATAACGAGATGATCGA+CGG | 0.583188 | 4_2:+55365532 | None:intergenic |
| GCAGATTCAGAACGACTAGC+CGG | 0.583189 | 4_2:+55364451 | None:intergenic |
| GGGAGGCAAAAGAGGTTCCA+AGG | 0.587727 | 4_2:-55359903 | Msa0608370:CDS |
| ATGACCAGGGATTGCCCAAG+TGG | 0.588076 | 4_2:-55360306 | Msa0608370:CDS |
| GTCCAAGTTAAGGCTGGTAA+GGG | 0.588329 | 4_2:-55359983 | Msa0608370:CDS |
| AGAGGAAGGAGGCTTTGAGA+AGG | 0.588884 | 4_2:-55360659 | Msa0608370:CDS |
| CCGATAACGAGATGATCGAC+GGG | 0.588987 | 4_2:+55365533 | None:intergenic |
| TGTGGTGTGGTGTATGAAGA+AGG | 0.590485 | 4_2:-55365132 | Msa0608370:intron |
| TTGATGGTGCCACTTACAGA+TGG | 0.590708 | 4_2:-55360748 | Msa0608370:CDS |
| TGCGAGGATCAATCTTAGCA+GGG | 0.591124 | 4_2:+55364395 | None:intergenic |
| AAAGGGGTCCAAGTTAAGGC+TGG | 0.592250 | 4_2:-55359989 | Msa0608370:CDS |
| AAAAGTGGTATGGGTAAGGG+AGG | 0.594301 | 4_2:-55359920 | Msa0608370:CDS |
| TCATCTGAATCATATTTGGA+CGG | 0.595641 | 4_2:+55360799 | None:intergenic |
| ATCTGCTCAACCGATAGCTA+AGG | 0.596585 | 4_2:-55364344 | Msa0608370:intron |
| AAAGGGTGGCAAGTCACCAA+AGG | 0.597191 | 4_2:-55359879 | Msa0608370:CDS |
| GATGAGTCGGAGGATGATGT+TGG | 0.597553 | 4_2:-55360424 | Msa0608370:CDS |
| CAGATATGATGAACAAATGG+AGG | 0.598813 | 4_2:-55361492 | Msa0608370:CDS |
| GCTGAAGCTGTAGAGGAAGG+AGG | 0.599542 | 4_2:-55360670 | Msa0608370:CDS |
| GATCTCTGCGCCGCCCCTGG+TGG | 0.599949 | 4_2:-55365584 | Msa0608370:CDS |
| TACTTGAACAAGCTTATGAG+CGG | 0.604310 | 4_2:-55361466 | Msa0608370:CDS |
| AAGCAAGGGAAAACAACTCA+TGG | 0.604688 | 4_2:+55362869 | None:intergenic |
| GTTGTTTGAGAAAGTTGAGG+TGG | 0.608440 | 4_2:-55364482 | Msa0608370:CDS |
| TTGCATCCAACCACCAGGGG+CGG | 0.609416 | 4_2:+55365574 | None:intergenic |
| AAGAGGAGATCACAAATATG+TGG | 0.610175 | 4_2:-55360711 | Msa0608370:CDS |
| AAGTACATGTTTGATGACCA+GGG | 0.610744 | 4_2:-55360319 | Msa0608370:CDS |
| TGATTCATCATCTGATGAGT+CGG | 0.612893 | 4_2:-55360437 | Msa0608370:CDS |
| GTTGACACCACTGACTATGA+AGG | 0.612962 | 4_2:-55361964 | Msa0608370:CDS |
| GGCGGCGCAGAGATCGAGAA+CGG | 0.614066 | 4_2:+55365592 | None:intergenic |
| TCATGACCTAACAACTGAAG+AGG | 0.614244 | 4_2:-55363765 | Msa0608370:intron |
| TGGAAACACAACTTTGAGGA+AGG | 0.614292 | 4_2:-55363891 | Msa0608370:CDS |
| GATTGAGAAAGTCCGCAAGA+AGG | 0.615324 | 4_2:-55360128 | Msa0608370:CDS |
| GGAGGAACTGACAAATGCAA+TGG | 0.622437 | 4_2:-55363278 | Msa0608370:CDS |
| TTTGCTGAAGCTGTAGAGGA+AGG | 0.623225 | 4_2:-55360673 | Msa0608370:CDS |
| AGTGGCAAGGTTCCTATGGG+TGG | 0.625458 | 4_2:-55359824 | Msa0608370:CDS |
| CTAACTGTTTCTGCTAACAA+CGG | 0.630510 | 4_2:+55359520 | None:intergenic |
| AAGCAAAAGAGGCATCGTGA+CGG | 0.630705 | 4_2:-55364209 | Msa0608370:CDS |
| CACTGACTATGAAGGTGGTG+AGG | 0.631148 | 4_2:-55361956 | Msa0608370:CDS |
| GAGATCGAGAACGGAGCGTG+AGG | 0.632094 | 4_2:+55365601 | None:intergenic |
| GAAAGCAACAGGGATGCAAG+TGG | 0.639453 | 4_2:-55362914 | Msa0608370:CDS |
| GACTTGCATCCAACCACCAG+GGG | 0.641278 | 4_2:+55365571 | None:intergenic |
| AGAATGAAATGGATATTGAT+GGG | 0.643466 | 4_2:-55360627 | Msa0608370:CDS |
| TACTAGACCTGCAAAGAAGG+TGG | 0.643500 | 4_2:-55360191 | Msa0608370:CDS |
| AGAGGTTCCAAGGCAAAGGG+TGG | 0.646378 | 4_2:-55359893 | Msa0608370:CDS |
| CTCACCACCTTCATAGTCAG+TGG | 0.647399 | 4_2:+55361957 | None:intergenic |
| TTCATCATCTGATGAGTCGG+AGG | 0.647809 | 4_2:-55360434 | Msa0608370:CDS |
| TGCCACTTACAGATGGTACA+GGG | 0.648540 | 4_2:-55360741 | Msa0608370:CDS |
| CTTATGCTAAGAAGATGCTG+AGG | 0.650492 | 4_2:-55360381 | Msa0608370:CDS |
| GGAAAATGAGCATGATGTGG+TGG | 0.650915 | 4_2:-55363329 | Msa0608370:CDS |
| TCTTCATCCTGCGATCAACA+AGG | 0.651155 | 4_2:+55359954 | None:intergenic |
| GTCGCAGGATTACAATTCTG+TGG | 0.652491 | 4_2:-55365150 | Msa0608370:CDS |
| TGCTTGATATCGAGAATGCG+AGG | 0.652693 | 4_2:+55364379 | None:intergenic |
| CGACTTGCATCCAACCACCA+GGG | 0.654008 | 4_2:+55365570 | None:intergenic |
| AGGATTACAATTCTGTGGTG+TGG | 0.654132 | 4_2:-55365145 | Msa0608370:CDS |
| AAGGGTAGCAGGGCTTCGAG+CGG | 0.655341 | 4_2:-55359788 | Msa0608370:CDS |
| TACTACTTAGCCAAAGAACA+CGG | 0.656107 | 4_2:-55365686 | Msa0608370:CDS |
| CGAACCTGCTGCTACAGCTG+AGG | 0.658051 | 4_2:-55363353 | Msa0608370:CDS |
| GAGAATGATGAAAACAAAGG+TGG | 0.658526 | 4_2:-55361916 | Msa0608370:CDS |
| TAGAATACTCAACGAAATGG+AGG | 0.659661 | 4_2:-55363296 | Msa0608370:CDS |
| AGGTGGCTGAGGCCAAAGCA+CGG | 0.664696 | 4_2:-55360174 | Msa0608370:CDS |
| ACAAGGCACGGAAAGCAACA+GGG | 0.668316 | 4_2:-55362924 | Msa0608370:CDS |
| GGAAGAAGCGTGTTGCAATG+AGG | 0.668768 | 4_2:-55360153 | Msa0608370:CDS |
| GCAGGATGAAGAGTGATGCG+AGG | 0.670277 | 4_2:-55359943 | Msa0608370:CDS |
| GCGAGGATCAATCTTAGCAG+GGG | 0.672582 | 4_2:+55364396 | None:intergenic |
| ACTGACTATGAAGGTGGTGA+GGG | 0.672668 | 4_2:-55361955 | Msa0608370:CDS |
| GATTCAGAACGACTAGCCGG+TGG | 0.675718 | 4_2:+55364454 | None:intergenic |
| TGGTACAGGGCCCACCCAAG+AGG | 0.676289 | 4_2:-55360728 | Msa0608370:CDS |
| GGTGGCAAGTCACCAAAGGG+TGG | 0.678232 | 4_2:-55359875 | Msa0608370:CDS |
| GCAGTTGTTTGAGAAAGTTG+AGG | 0.687334 | 4_2:-55364485 | Msa0608370:intron |
| TGACAGGCTTAACTGGTACA+CGG | 0.694707 | 4_2:+55360260 | None:intergenic |
| GTATGTAGTTGCGAAGAAAG+GGG | 0.695130 | 4_2:-55360005 | Msa0608370:CDS |
| AAGGGTGGCAGGGCTCCGAG+TGG | 0.701713 | 4_2:-55359842 | Msa0608370:CDS |
| AGTGAGAATGATGAAAACAA+AGG | 0.718737 | 4_2:-55361919 | Msa0608370:CDS |
| GACACCACTGACTATGAAGG+TGG | 0.729517 | 4_2:-55361961 | Msa0608370:CDS |
| GGTGGAAAATGAGCATGATG+TGG | 0.733532 | 4_2:-55363332 | Msa0608370:CDS |
| ACTGAACCAAGAATCTCCAG+AGG | 0.740370 | 4_2:+55363833 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAACTATATTTTATCT+TGG | + | chr4_2:55360532-55360551 | None:intergenic | 10.0% |
| !!! | TTTTATTTATTTTATATCTG+GGG | - | chr4_2:55361800-55361819 | Msa0608370:intron | 10.0% |
| !! | TAATAAATCAATTGTTAATA+AGG | + | chr4_2:55362520-55362539 | None:intergenic | 10.0% |
| !! | AAAAATAAACATACAAAATT+TGG | + | chr4_2:55365562-55365581 | None:intergenic | 10.0% |
| !! | ATGTTAATTAAGCAAAAATT+AGG | + | chr4_2:55360012-55360031 | None:intergenic | 15.0% |
| !!! | CATATTTAATTTGAAGTTAA+AGG | + | chr4_2:55360385-55360404 | None:intergenic | 15.0% |
| !!! | TAATTTTTTTAATAGTCTGA+GGG | - | chr4_2:55361538-55361557 | Msa0608370:intron | 15.0% |
| !!! | TTTATTTATTTTATATCTGG+GGG | - | chr4_2:55361801-55361820 | Msa0608370:intron | 15.0% |
| !! | AAAGATCAAAGAAAATAAAA+CGG | - | chr4_2:55364705-55364724 | Msa0608370:intron | 15.0% |
| !!! | TTGTATGTTTATTTTTCTTT+TGG | - | chr4_2:55365566-55365585 | Msa0608370:CDS | 15.0% |
| !! | TTATAGCACAAATGATAAAA+GGG | - | chr4_2:55360233-55360252 | Msa0608370:CDS | 20.0% |
| !! | CATAGACTAAAATTGAAAAT+AGG | + | chr4_2:55360296-55360315 | None:intergenic | 20.0% |
| !! | TTAAAAAAGAAGTTGAAACA+CGG | - | chr4_2:55360458-55360477 | Msa0608370:CDS | 20.0% |
| !!! | CTAATTTTTTTAATAGTCTG+AGG | - | chr4_2:55361537-55361556 | Msa0608370:intron | 20.0% |
| !!! | AAAAAAGAACAAACATTTTC+AGG | + | chr4_2:55361771-55361790 | None:intergenic | 20.0% |
| !! | CAACATTGTTAATATTTAGT+TGG | - | chr4_2:55362111-55362130 | Msa0608370:intron | 20.0% |
| !! | ATTTAGTTGGAAACTATAAT+AGG | - | chr4_2:55362124-55362143 | Msa0608370:intron | 20.0% |
| !! | TTTATTACTCATCTTTAGAT+AGG | - | chr4_2:55363189-55363208 | Msa0608370:intron | 20.0% |
| !! | AACATGAAAAACAATAACAA+AGG | + | chr4_2:55363425-55363444 | None:intergenic | 20.0% |
| !! | AAAAAAACAAATGAACAAGA+GGG | + | chr4_2:55363639-55363658 | None:intergenic | 20.0% |
| !!! | AGATAATAGTTTTCAAGTAT+CGG | + | chr4_2:55364130-55364149 | None:intergenic | 20.0% |
| !! | TCATATTAAATATTCGACAT+AGG | + | chr4_2:55364218-55364237 | None:intergenic | 20.0% |
| !! | ATATTTAATATGAAGCTTAC+CGG | - | chr4_2:55364225-55364244 | Msa0608370:CDS | 20.0% |
| !! | TGAAATCATGTTTATATTAC+CGG | + | chr4_2:55364247-55364266 | None:intergenic | 20.0% |
| !! | ATATAAACATGATTTCATGT+TGG | - | chr4_2:55364250-55364269 | Msa0608370:intron | 20.0% |
| !!! | TAAATATTTCTTTTTGCACA+CGG | + | chr4_2:55364381-55364400 | None:intergenic | 20.0% |
| !!! | AAATCAATCAAATTTGGAAT+AGG | + | chr4_2:55365662-55365681 | None:intergenic | 20.0% |
| !! | AGTTATTTAGTAATTGATTG+TGG | - | chr4_2:55365699-55365718 | Msa0608370:CDS | 20.0% |
| !! | GTTATTTAGTAATTGATTGT+GGG | - | chr4_2:55365700-55365719 | Msa0608370:CDS | 20.0% |
| !!! | TGGTTAATGATATGATTTTA+TGG | - | chr4_2:55365759-55365778 | Msa0608370:five_prime_UTR | 20.0% |
| !!! | GGTTAATGATATGATTTTAT+GGG | - | chr4_2:55365760-55365779 | Msa0608370:five_prime_UTR | 20.0% |
| !!! | TATGATTTTATGGGTAATAT+TGG | - | chr4_2:55365769-55365788 | Msa0608370:five_prime_UTR | 20.0% |
| ! | AGGAAAATCATGAATGAAAA+TGG | - | chr4_2:55359828-55359847 | Msa0608370:CDS | 25.0% |
| ! | TTTGATGTTATTCTTCATGA+TGG | - | chr4_2:55359861-55359880 | Msa0608370:CDS | 25.0% |
| ! | CAAAAATTAGGTTAAAACCT+TGG | + | chr4_2:55360000-55360019 | None:intergenic | 25.0% |
| !!! | TCTGTTTGTGTTTTTTAATC+TGG | - | chr4_2:55360173-55360192 | Msa0608370:CDS | 25.0% |
| !!! | TGTGTTTTTTAATCTGGTTT+TGG | - | chr4_2:55360179-55360198 | Msa0608370:CDS | 25.0% |
| ! | CTTATAGCACAAATGATAAA+AGG | - | chr4_2:55360232-55360251 | Msa0608370:CDS | 25.0% |
| ! | AGGAAGTTTGTATATTTAGA+GGG | + | chr4_2:55360276-55360295 | None:intergenic | 25.0% |
| ! | TAGGAAGTTTGTATATTTAG+AGG | + | chr4_2:55360277-55360296 | None:intergenic | 25.0% |
| ! | TAAAAAAGAAGTTGAAACAC+GGG | - | chr4_2:55360459-55360478 | Msa0608370:CDS | 25.0% |
| ! | AGAACAATTTCAATACTGTT+TGG | + | chr4_2:55360644-55360663 | None:intergenic | 25.0% |
| ! | TTGTTAATTGTTTGATGTTG+TGG | - | chr4_2:55360727-55360746 | Msa0608370:CDS | 25.0% |
| !! | ATCTGCTGAGATATATATTT+TGG | - | chr4_2:55360819-55360838 | Msa0608370:CDS | 25.0% |
| !! | TCTGCTGAGATATATATTTT+GGG | - | chr4_2:55360820-55360839 | Msa0608370:CDS | 25.0% |
| ! | AAACAATTAACCTTAGCTAT+CGG | + | chr4_2:55360922-55360941 | None:intergenic | 25.0% |
| !!! | CTCTTTTCATTTGATTTACT+TGG | - | chr4_2:55360977-55360996 | Msa0608370:intron | 25.0% |
| !! | GATTTTACATTGTTTCGTTT+GGG | - | chr4_2:55361092-55361111 | Msa0608370:intron | 25.0% |
| ! | TTTACTCATTCTTTCTCAAA+TGG | - | chr4_2:55361115-55361134 | Msa0608370:intron | 25.0% |
| ! | TTTGCAAAAGAAACTAATTG+TGG | - | chr4_2:55361200-55361219 | Msa0608370:intron | 25.0% |
| !! | AATGTTATGATATTTGGAGT+GGG | - | chr4_2:55361225-55361244 | Msa0608370:intron | 25.0% |
| ! | GTTGTAACTGCTTAATTATA+TGG | - | chr4_2:55361293-55361312 | Msa0608370:intron | 25.0% |
| !! | TTATAACTATTTTGTGCTAC+AGG | - | chr4_2:55361331-55361350 | Msa0608370:intron | 25.0% |
| !! | TGTAATAAAAGCTTTGATTG+TGG | - | chr4_2:55361609-55361628 | Msa0608370:intron | 25.0% |
| ! | AAAAATAATGCCAGAAATGA+TGG | + | chr4_2:55361735-55361754 | None:intergenic | 25.0% |
| !! | CTGTTTTATAATCCTTTTTG+TGG | - | chr4_2:55362260-55362279 | Msa0608370:intron | 25.0% |
| ! | AAATAAATATTGTGCGCTTT+CGG | + | chr4_2:55362574-55362593 | None:intergenic | 25.0% |
| ! | AAAGCGCACAATATTTATTT+GGG | - | chr4_2:55362574-55362593 | Msa0608370:intron | 25.0% |
| ! | TAAGTAAGATATACTCTTTC+TGG | + | chr4_2:55363086-55363105 | None:intergenic | 25.0% |
| !! | AGTATATCTTACTTACCTTT+TGG | - | chr4_2:55363091-55363110 | Msa0608370:intron | 25.0% |
| !! | GTATATCTTACTTACCTTTT+GGG | - | chr4_2:55363092-55363111 | Msa0608370:intron | 25.0% |
| ! | ACTAGTTATTAATCGTTTCT+TGG | - | chr4_2:55363225-55363244 | Msa0608370:intron | 25.0% |
| ! | TTAAATAAAGTGATGTTGTG+AGG | - | chr4_2:55363583-55363602 | Msa0608370:CDS | 25.0% |
| ! | TAAATAAAGTGATGTTGTGA+GGG | - | chr4_2:55363584-55363603 | Msa0608370:CDS | 25.0% |
| ! | CAAAAAAACAAATGAACAAG+AGG | + | chr4_2:55363640-55363659 | None:intergenic | 25.0% |
| ! | GAATAAATGTGATTGAAGAA+TGG | + | chr4_2:55363674-55363693 | None:intergenic | 25.0% |
| !!! | TCTCATAAATGGACTATAAA+TGG | + | chr4_2:55363946-55363965 | None:intergenic | 25.0% |
| !! | ACCTTGTTTATCTCATAAAT+GGG | - | chr4_2:55364029-55364048 | Msa0608370:intron | 25.0% |
| !!! | GATAATAGTTTTCAAGTATC+GGG | + | chr4_2:55364129-55364148 | None:intergenic | 25.0% |
| ! | TTAAAGGAAACTGGAATTAA+AGG | + | chr4_2:55364171-55364190 | None:intergenic | 25.0% |
| ! | GAATGAAGGAAAGAAATTAA+AGG | + | chr4_2:55364187-55364206 | None:intergenic | 25.0% |
| ! | CATAGGATATATTTGAATGA+AGG | + | chr4_2:55364201-55364220 | None:intergenic | 25.0% |
| ! | ATCTTCATCTGAATCATATT+TGG | + | chr4_2:55364461-55364480 | None:intergenic | 25.0% |
| ! | AGAATGAAATGGATATTGAT+GGG | - | chr4_2:55364626-55364645 | Msa0608370:intron | 25.0% |
| ! | AATCTCAAAATCCATTTCAT+TGG | + | chr4_2:55364770-55364789 | None:intergenic | 25.0% |
| !!! | AGCTGTTTTGTTTTTCATTA+AGG | - | chr4_2:55365632-55365651 | Msa0608370:CDS | 25.0% |
| CTAACTCTAGATTTACATTC+AGG | + | chr4_2:55359810-55359829 | None:intergenic | 30.0% | |
| ! | CTGAATGTAAATCTAGAGTT+AGG | - | chr4_2:55359808-55359827 | Msa0608370:CDS | 30.0% |
| !! | CTTTTACTTTGTTGTGTGAT+AGG | - | chr4_2:55360073-55360092 | Msa0608370:CDS | 30.0% |
| AAAAAAGAAGTTGAAACACG+GGG | - | chr4_2:55360460-55360479 | Msa0608370:CDS | 30.0% | |
| AGGGATAGTTGTATATTTAG+AGG | - | chr4_2:55360488-55360507 | Msa0608370:CDS | 30.0% | |
| GGGATAGTTGTATATTTAGA+GGG | - | chr4_2:55360489-55360508 | Msa0608370:CDS | 30.0% | |
| ! | TTTTATAAGCTAAGCTGTCT+TGG | - | chr4_2:55360553-55360572 | Msa0608370:CDS | 30.0% |
| ! | ATGCCACAAATTGTTTTCAT+AGG | - | chr4_2:55360613-55360632 | Msa0608370:CDS | 30.0% |
| GAACCTATGAAAACAATTTG+TGG | + | chr4_2:55360619-55360638 | None:intergenic | 30.0% | |
| TTCACAATGAATTCCACATA+GGG | + | chr4_2:55360705-55360724 | None:intergenic | 30.0% | |
| ATTCACAATGAATTCCACAT+AGG | + | chr4_2:55360706-55360725 | None:intergenic | 30.0% | |
| TTAATTGTTTGATGTTGTGG+TGG | - | chr4_2:55360730-55360749 | Msa0608370:CDS | 30.0% | |
| ! | CTGCTGAGATATATATTTTG+GGG | - | chr4_2:55360821-55360840 | Msa0608370:CDS | 30.0% |
| TTGGAAACAATAAGCAAAAG+AGG | - | chr4_2:55361033-55361052 | Msa0608370:intron | 30.0% | |
| ! | GGATTTTACATTGTTTCGTT+TGG | - | chr4_2:55361091-55361110 | Msa0608370:intron | 30.0% |
| GTGGAGAATGTTATGATATT+TGG | - | chr4_2:55361219-55361238 | Msa0608370:intron | 30.0% | |
| GAATGTTATGATATTTGGAG+TGG | - | chr4_2:55361224-55361243 | Msa0608370:intron | 30.0% | |
| ! | ATGTTATGATATTTGGAGTG+GGG | - | chr4_2:55361226-55361245 | Msa0608370:intron | 30.0% |
| ! | TTCAACTGCTTATTTAGAGT+AGG | - | chr4_2:55361261-55361280 | Msa0608370:intron | 30.0% |
| ! | TCAACTGCTTATTTAGAGTA+GGG | - | chr4_2:55361262-55361281 | Msa0608370:intron | 30.0% |
| AAAATACCTCTTCAGTTGTT+AGG | + | chr4_2:55361497-55361516 | None:intergenic | 30.0% | |
| !!! | CAACTGAAGAGGTATTTTTT+TGG | - | chr4_2:55361499-55361518 | Msa0608370:intron | 30.0% |
| ! | GATAATAAAAGCTTTGACTG+TGG | - | chr4_2:55361585-55361604 | Msa0608370:intron | 30.0% |
| TGATAGAATACTCAACGAAA+TGG | - | chr4_2:55361954-55361973 | Msa0608370:CDS | 30.0% | |
| !! | CATGATTTTAGTCCCAAAAA+TGG | - | chr4_2:55362168-55362187 | Msa0608370:intron | 30.0% |
| TACTCGTTATAAATGCATAG+TGG | - | chr4_2:55362538-55362557 | Msa0608370:intron | 30.0% | |
| ! | GAAAGCGCACAATATTTATT+TGG | - | chr4_2:55362573-55362592 | Msa0608370:intron | 30.0% |
| AAGCGCACAATATTTATTTG+GGG | - | chr4_2:55362575-55362594 | Msa0608370:intron | 30.0% | |
| TAAATTTATGTGCTTGAAGC+AGG | - | chr4_2:55362623-55362642 | Msa0608370:intron | 30.0% | |
| TAACAAAGTGAAGAAGAGTT+CGG | + | chr4_2:55362665-55362684 | None:intergenic | 30.0% | |
| ACTCTTCTTCACTTTGTTAA+AGG | - | chr4_2:55362666-55362685 | Msa0608370:intron | 30.0% | |
| TAAAGGAGATATGTACATAG+AGG | - | chr4_2:55362683-55362702 | Msa0608370:intron | 30.0% | |
| ! | GGATTAGTAGGAAAATACTA+GGG | + | chr4_2:55362983-55363002 | None:intergenic | 30.0% |
| !! | TGGATTAGTAGGAAAATACT+AGG | + | chr4_2:55362984-55363003 | None:intergenic | 30.0% |
| TAACTTACTCCAAAGAGTAA+TGG | + | chr4_2:55363004-55363023 | None:intergenic | 30.0% | |
| AGTGAGAATGATGAAAACAA+AGG | - | chr4_2:55363334-55363353 | Msa0608370:CDS | 30.0% | |
| !! | AACTTTTAATCCTTGAGTTG+AGG | + | chr4_2:55363515-55363534 | None:intergenic | 30.0% |
| TCAACTCAAGGATTAAAAGT+TGG | - | chr4_2:55363514-55363533 | Msa0608370:intron | 30.0% | |
| CAACTCAAGGATTAAAAGTT+GGG | - | chr4_2:55363515-55363534 | Msa0608370:intron | 30.0% | |
| AACTCAAGGATTAAAAGTTG+GGG | - | chr4_2:55363516-55363535 | Msa0608370:intron | 30.0% | |
| AACCAGATATGATGAACAAA+TGG | - | chr4_2:55363758-55363777 | Msa0608370:intron | 30.0% | |
| ATGTGTCTATCTCTCATAAA+TGG | + | chr4_2:55363957-55363976 | None:intergenic | 30.0% | |
| ! | CACCTTGTTTATCTCATAAA+TGG | - | chr4_2:55364028-55364047 | Msa0608370:intron | 30.0% |
| TCTCATAAATGGGCAATAAA+TGG | - | chr4_2:55364039-55364058 | Msa0608370:intron | 30.0% | |
| TGAACTCTAATTATACCTTC+CGG | - | chr4_2:55364070-55364089 | Msa0608370:intron | 30.0% | |
| GAAACTGGAATTAAAGGAAT+GGG | + | chr4_2:55364165-55364184 | None:intergenic | 30.0% | |
| GGAAAGAAATTAAAGGAAAC+TGG | + | chr4_2:55364180-55364199 | None:intergenic | 30.0% | |
| TGATTTCATGTTGGTATTGT+TGG | - | chr4_2:55364259-55364278 | Msa0608370:intron | 30.0% | |
| ACAAAAATACCAGTCCTAAA+GGG | + | chr4_2:55364301-55364320 | None:intergenic | 30.0% | |
| ! | TTTTGTCATGTCAAATGTGT+TGG | - | chr4_2:55364315-55364334 | Msa0608370:intron | 30.0% |
| TTGGTTATTGTTGAGAATTG+TGG | - | chr4_2:55364334-55364353 | Msa0608370:intron | 30.0% | |
| ! | TTTTGCACACGGAATAAAAA+AGG | + | chr4_2:55364370-55364389 | None:intergenic | 30.0% |
| ! | ACACATGTTCTATTACCTTT+TGG | - | chr4_2:55364400-55364419 | Msa0608370:CDS | 30.0% |
| TCATCTGAATCATATTTGGA+CGG | + | chr4_2:55364457-55364476 | None:intergenic | 30.0% | |
| ATATGATTCAGATGAAGATC+AGG | - | chr4_2:55364462-55364481 | Msa0608370:CDS | 30.0% | |
| GAGAATGAAATGGATATTGA+TGG | - | chr4_2:55364625-55364644 | Msa0608370:intron | 30.0% | |
| ! | ATCTAAAGCATCCAATGAAA+TGG | - | chr4_2:55364756-55364775 | Msa0608370:intron | 30.0% |
| ATAAAAACGCTGTTCCAAAA+AGG | - | chr4_2:55365214-55365233 | Msa0608370:intron | 30.0% | |
| GGAAGGAAATAACTGAAAAT+AGG | - | chr4_2:55365495-55365514 | Msa0608370:CDS | 30.0% | |
| GGAAATAACTGAAAATAGGT+TGG | - | chr4_2:55365499-55365518 | Msa0608370:CDS | 30.0% | |
| CAGACGAAATCAATCAAATT+TGG | + | chr4_2:55365668-55365687 | None:intergenic | 30.0% | |
| TTAGCAGAAACAGTTAGAAA+TGG | - | chr4_2:55365739-55365758 | Msa0608370:exon | 30.0% | |
| ! | GATTTTATGGGTAATATTGG+AGG | - | chr4_2:55365772-55365791 | Msa0608370:five_prime_UTR | 30.0% |
| GAAGAAGAGATTGAAGTTGA+AGG | + | chr4_2:55359487-55359506 | None:intergenic | 35.0% | |
| TTCACCAATCCATCAACAAT+GGG | - | chr4_2:55359504-55359523 | Msa0608370:three_prime_UTR | 35.0% | |
| ! | TTTACCCATTGTTGATGGAT+TGG | + | chr4_2:55359511-55359530 | None:intergenic | 35.0% |
| TTTGCTTTACCCATTGTTGA+TGG | + | chr4_2:55359516-55359535 | None:intergenic | 35.0% | |
| ATGGGTAAAGCAAAAGCAAA+AGG | - | chr4_2:55359522-55359541 | Msa0608370:three_prime_UTR | 35.0% | |
| TACTACTTAGCCAAAGAACA+CGG | - | chr4_2:55359567-55359586 | Msa0608370:three_prime_UTR | 35.0% | |
| !!! | TACTCAGTTTTTAGCTCCTA+AGG | - | chr4_2:55359962-55359981 | Msa0608370:CDS | 35.0% |
| !!! | ACTCAGTTTTTAGCTCCTAA+GGG | - | chr4_2:55359963-55359982 | Msa0608370:CDS | 35.0% |
| ! | TTGGTAACAAAAGTTCCCTT+AGG | + | chr4_2:55359981-55360000 | None:intergenic | 35.0% |
| ! | TAAGGGAACTTTTGTTACCA+AGG | - | chr4_2:55359980-55359999 | Msa0608370:CDS | 35.0% |
| ! | TTGTTGTGTGATAGGTTTTC+AGG | - | chr4_2:55360081-55360100 | Msa0608370:CDS | 35.0% |
| ! | CGATATCAAGCATCTTTTTG+AGG | - | chr4_2:55360885-55360904 | Msa0608370:intron | 35.0% |
| TGTTGAATCGATAATGCAGA+TGG | - | chr4_2:55361001-55361020 | Msa0608370:intron | 35.0% | |
| AAATCCAAAACACAGTGATG+AGG | + | chr4_2:55361077-55361096 | None:intergenic | 35.0% | |
| CTAAATAAGCAGTTGAACTG+CGG | + | chr4_2:55361258-55361277 | None:intergenic | 35.0% | |
| AAGATGGAAACACAACTTTG+AGG | - | chr4_2:55361358-55361377 | Msa0608370:intron | 35.0% | |
| ! | CTTCAGCTGCAAATTTTGTT+TGG | - | chr4_2:55361388-55361407 | Msa0608370:CDS | 35.0% |
| ! | AATCTCTCTCTGAAGATTTG+AGG | - | chr4_2:55361647-55361666 | Msa0608370:intron | 35.0% |
| ! | ATCTCTCTCTGAAGATTTGA+GGG | - | chr4_2:55361648-55361667 | Msa0608370:intron | 35.0% |
| ! | TCTGAAGATTTGAGGGTTTT+GGG | - | chr4_2:55361655-55361674 | Msa0608370:intron | 35.0% |
| ACTTTACTCTCCATCATTTC+TGG | - | chr4_2:55361722-55361741 | Msa0608370:intron | 35.0% | |
| GGTAATTATGTTGTATCTGC+TGG | - | chr4_2:55361822-55361841 | Msa0608370:intron | 35.0% | |
| TAGAATACTCAACGAAATGG+AGG | - | chr4_2:55361957-55361976 | Msa0608370:CDS | 35.0% | |
| !!! | TTTTTTCACGCTTCTTCTTG+CGG | + | chr4_2:55362002-55362021 | None:intergenic | 35.0% |
| TCTATCAAAAAGAAGAGCCA+AGG | - | chr4_2:55362026-55362045 | Msa0608370:intron | 35.0% | |
| AACTAAGAAGCTACAAACCT+TGG | + | chr4_2:55362046-55362065 | None:intergenic | 35.0% | |
| TTAGTTACCACTGAGTACTT+TGG | - | chr4_2:55362060-55362079 | Msa0608370:intron | 35.0% | |
| TAGTTACCACTGAGTACTTT+GGG | - | chr4_2:55362061-55362080 | Msa0608370:intron | 35.0% | |
| TAGTCCCAAAAATGGTTTCA+AGG | - | chr4_2:55362176-55362195 | Msa0608370:intron | 35.0% | |
| !! | CATGCCTTGAAACCATTTTT+GGG | + | chr4_2:55362183-55362202 | None:intergenic | 35.0% |
| ! | TCATGCCTTGAAACCATTTT+TGG | + | chr4_2:55362184-55362203 | None:intergenic | 35.0% |
| GTTAATCCTTCCATGTATCA+TGG | - | chr4_2:55362221-55362240 | Msa0608370:intron | 35.0% | |
| ! | AAACAGCACTTGATTTGAGA+TGG | + | chr4_2:55362443-55362462 | None:intergenic | 35.0% |
| ACAATTACTCATCAAGTCCT+TGG | + | chr4_2:55362497-55362516 | None:intergenic | 35.0% | |
| AGCGCACAATATTTATTTGG+GGG | - | chr4_2:55362576-55362595 | Msa0608370:intron | 35.0% | |
| AACATTCACAGTAAACTCTC+AGG | + | chr4_2:55362727-55362746 | None:intergenic | 35.0% | |
| ! | TTCTGAGAGTTTACTGTGAT+AGG | - | chr4_2:55362746-55362765 | Msa0608370:intron | 35.0% |
| CTAGGGTTGTCACAATAATT+TGG | + | chr4_2:55362966-55362985 | None:intergenic | 35.0% | |
| !! | CCAAAGAGTAATGGATTAGT+AGG | + | chr4_2:55362995-55363014 | None:intergenic | 35.0% |
| CCTACTAATCCATTACTCTT+TGG | - | chr4_2:55362992-55363011 | Msa0608370:intron | 35.0% | |
| !!! | TGTTCTTTTTTCCCTTCAGA+AGG | - | chr4_2:55363057-55363076 | Msa0608370:intron | 35.0% |
| !! | ATCTTACTTACCTTTTGGGA+TGG | - | chr4_2:55363096-55363115 | Msa0608370:intron | 35.0% |
| !!! | TCTTACTTACCTTTTGGGAT+GGG | - | chr4_2:55363097-55363116 | Msa0608370:intron | 35.0% |
| AACAAAATACCCATCCCAAA+AGG | + | chr4_2:55363109-55363128 | None:intergenic | 35.0% | |
| GTTCTGTCACTATATCTTCA+TGG | - | chr4_2:55363155-55363174 | Msa0608370:intron | 35.0% | |
| GAGAATGATGAAAACAAAGG+TGG | - | chr4_2:55363337-55363356 | Msa0608370:CDS | 35.0% | |
| ATTCTGACGAAGAACGTAAA+AGG | - | chr4_2:55363386-55363405 | Msa0608370:CDS | 35.0% | |
| AGAACGTAAAAGGTGATTGA+CGG | - | chr4_2:55363396-55363415 | Msa0608370:CDS | 35.0% | |
| ACTCAAGGATTAAAAGTTGG+GGG | - | chr4_2:55363517-55363536 | Msa0608370:intron | 35.0% | |
| AAAAGTTGGGGGTTATGTTA+CGG | - | chr4_2:55363528-55363547 | Msa0608370:intron | 35.0% | |
| GTTATGTTACGGGTAAAGTT+GGG | - | chr4_2:55363539-55363558 | Msa0608370:intron | 35.0% | |
| TTATGTTACGGGTAAAGTTG+GGG | - | chr4_2:55363540-55363559 | Msa0608370:intron | 35.0% | |
| TAAAGTTGGGGGTTATGTTA+CGG | - | chr4_2:55363552-55363571 | Msa0608370:intron | 35.0% | |
| AACAGAATAAAACAGTGGAG+AGG | + | chr4_2:55363700-55363719 | None:intergenic | 35.0% | |
| !! | TCTCCACTGTTTTATTCTGT+TGG | - | chr4_2:55363699-55363718 | Msa0608370:intron | 35.0% |
| AGACCAACAGAATAAAACAG+TGG | + | chr4_2:55363705-55363724 | None:intergenic | 35.0% | |
| !! | TTCTGTTGGTCTTTCATAAC+CGG | - | chr4_2:55363713-55363732 | Msa0608370:intron | 35.0% |
| GTATATACAGTTAGATTCCC+CGG | + | chr4_2:55363735-55363754 | None:intergenic | 35.0% | |
| CTCCATTTGTTCATCATATC+TGG | + | chr4_2:55363763-55363782 | None:intergenic | 35.0% | |
| CAGATATGATGAACAAATGG+AGG | - | chr4_2:55363761-55363780 | Msa0608370:intron | 35.0% | |
| TACTTGAACAAGCTTATGAG+CGG | - | chr4_2:55363787-55363806 | Msa0608370:CDS | 35.0% | |
| TGAGCGGTTTGTGATAAAAA+AGG | - | chr4_2:55363803-55363822 | Msa0608370:CDS | 35.0% | |
| CGGTTTGTGATAAAAAAGGA+AGG | - | chr4_2:55363807-55363826 | Msa0608370:CDS | 35.0% | |
| GCGATAGATTAGTGATTTAG+TGG | - | chr4_2:55363977-55363996 | Msa0608370:intron | 35.0% | |
| GCCCATTTATGAGATAAACA+AGG | + | chr4_2:55364033-55364052 | None:intergenic | 35.0% | |
| TCTAATTATACCTTCCGGTT+TGG | - | chr4_2:55364075-55364094 | Msa0608370:intron | 35.0% | |
| CTAATTATACCTTCCGGTTT+GGG | - | chr4_2:55364076-55364095 | Msa0608370:intron | 35.0% | |
| CCTTTATATAACTCCCAAAC+CGG | + | chr4_2:55364092-55364111 | None:intergenic | 35.0% | |
| ! | CGGTTTGGGAGTTATATAAA+GGG | - | chr4_2:55364090-55364109 | Msa0608370:intron | 35.0% |
| GGAAACTGGAATTAAAGGAA+TGG | + | chr4_2:55364166-55364185 | None:intergenic | 35.0% | |
| GACAAAAATACCAGTCCTAA+AGG | + | chr4_2:55364302-55364321 | None:intergenic | 35.0% | |
| !!! | TCTATTACCTTTTGGCTTGT+AGG | - | chr4_2:55364408-55364427 | Msa0608370:CDS | 35.0% |
| TCAAGAAGCAAATCCTTTGA+TGG | - | chr4_2:55364489-55364508 | Msa0608370:intron | 35.0% | |
| CATATTTGTGATCTCCTCTT+GGG | + | chr4_2:55364542-55364561 | None:intergenic | 35.0% | |
| ACATATTTGTGATCTCCTCT+TGG | + | chr4_2:55364543-55364562 | None:intergenic | 35.0% | |
| AAGAGGAGATCACAAATATG+TGG | - | chr4_2:55364542-55364561 | Msa0608370:intron | 35.0% | |
| CACAAATATGTGGTTTAGTC+AGG | - | chr4_2:55364552-55364571 | Msa0608370:intron | 35.0% | |
| !! | AATGGATATTGATGGGTTGA+AGG | - | chr4_2:55364633-55364652 | Msa0608370:intron | 35.0% |
| ! | TCTTTGATCTTTTCAGCAAC+AGG | + | chr4_2:55364697-55364716 | None:intergenic | 35.0% |
| CTCATCAGATGATGAATCAT+CGG | + | chr4_2:55364815-55364834 | None:intergenic | 35.0% | |
| TGATTCATCATCTGATGAGT+CGG | - | chr4_2:55364816-55364835 | Msa0608370:intron | 35.0% | |
| CTTAGCATAAGCTAGTATCT+CGG | + | chr4_2:55364863-55364882 | None:intergenic | 35.0% | |
| ! | TAAGTACATGTTTGATGACC+AGG | - | chr4_2:55364933-55364952 | Msa0608370:intron | 35.0% |
| ! | AAGTACATGTTTGATGACCA+GGG | - | chr4_2:55364934-55364953 | Msa0608370:intron | 35.0% |
| ! | GAACAGCGTTTTTATAGAGT+CGG | + | chr4_2:55365209-55365228 | None:intergenic | 35.0% |
| AGTATGTAGTTGCGAAGAAA+GGG | - | chr4_2:55365247-55365266 | Msa0608370:intron | 35.0% | |
| ! | TTGTTACTGACTGCTATAGA+TGG | - | chr4_2:55365589-55365608 | Msa0608370:CDS | 35.0% |
| TTCTGCTAACAACGGTATAT+TGG | + | chr4_2:55365728-55365747 | None:intergenic | 35.0% | |
| !! | CTAACTGTTTCTGCTAACAA+CGG | + | chr4_2:55365736-55365755 | None:intergenic | 35.0% |
| AGATTGAAGTTGAAGGAGGA+GGG | + | chr4_2:55359480-55359499 | None:intergenic | 40.0% | |
| GAAGAGATTGAAGTTGAAGG+AGG | + | chr4_2:55359484-55359503 | None:intergenic | 40.0% | |
| CTTCACCAATCCATCAACAA+TGG | - | chr4_2:55359503-55359522 | Msa0608370:three_prime_UTR | 40.0% | |
| GGATTCGAGGAAATGGAATT+TGG | + | chr4_2:55359634-55359653 | None:intergenic | 40.0% | |
| AGGATTACAATTCTGTGGTG+TGG | - | chr4_2:55360108-55360127 | Msa0608370:CDS | 40.0% | |
| !!! | AATCTGGTTTTGGCTCTGTT+TGG | - | chr4_2:55360189-55360208 | Msa0608370:CDS | 40.0% |
| TAATCCAAACAAGCCCTATG+TGG | - | chr4_2:55360689-55360708 | Msa0608370:CDS | 40.0% | |
| ! | AATTCCACATAGGGCTTGTT+TGG | + | chr4_2:55360696-55360715 | None:intergenic | 40.0% |
| ATTGTTTGATGTTGTGGTGG+TGG | - | chr4_2:55360733-55360752 | Msa0608370:CDS | 40.0% | |
| GCAGTTGTTTGAGAAAGTTG+AGG | - | chr4_2:55360768-55360787 | Msa0608370:CDS | 40.0% | |
| GTTGTTTGAGAAAGTTGAGG+TGG | - | chr4_2:55360771-55360790 | Msa0608370:CDS | 40.0% | |
| TGAATCGATAATGCAGATGG+TGG | - | chr4_2:55361004-55361023 | Msa0608370:intron | 40.0% | |
| ! | ACTACCTCATCACTGTGTTT+TGG | - | chr4_2:55361070-55361089 | Msa0608370:intron | 40.0% |
| TTGTGCTACAGGTATGAAGA+TGG | - | chr4_2:55361342-55361361 | Msa0608370:intron | 40.0% | |
| ! | TGGAAACACAACTTTGAGGA+AGG | - | chr4_2:55361362-55361381 | Msa0608370:intron | 40.0% |
| AGCTGGATCAGTAAAGCTTA+TGG | + | chr4_2:55361451-55361470 | None:intergenic | 40.0% | |
| TCCAGCTGATATACCAATCA+AGG | - | chr4_2:55361464-55361483 | Msa0608370:CDS | 40.0% | |
| TCCTTGATTGGTATATCAGC+TGG | + | chr4_2:55361468-55361487 | None:intergenic | 40.0% | |
| GTTAGGTCATGATCCTTGAT+TGG | + | chr4_2:55361480-55361499 | None:intergenic | 40.0% | |
| TCATGACCTAACAACTGAAG+AGG | - | chr4_2:55361488-55361507 | Msa0608370:CDS | 40.0% | |
| TTTGATTGTGGTTGTATGCC+AGG | - | chr4_2:55361621-55361640 | Msa0608370:intron | 40.0% | |
| ! | CTTCAGAGAGAGATTTTACC+TGG | + | chr4_2:55361642-55361661 | None:intergenic | 40.0% |
| !! | CTCTGAAGATTTGAGGGTTT+TGG | - | chr4_2:55361654-55361673 | Msa0608370:intron | 40.0% |
| ! | CTGAAGATTTGAGGGTTTTG+GGG | - | chr4_2:55361656-55361675 | Msa0608370:intron | 40.0% |
| ! | TGTATCTGCTGGTTATCTCT+AGG | - | chr4_2:55361833-55361852 | Msa0608370:intron | 40.0% |
| AGTTACCACTGAGTACTTTG+GGG | - | chr4_2:55362062-55362081 | Msa0608370:intron | 40.0% | |
| AGAATGCCATGATACATGGA+AGG | + | chr4_2:55362230-55362249 | None:intergenic | 40.0% | |
| GCTTAGAATGCCATGATACA+TGG | + | chr4_2:55362234-55362253 | None:intergenic | 40.0% | |
| GCTTGATCTCATCCACAAAA+AGG | + | chr4_2:55362275-55362294 | None:intergenic | 40.0% | |
| ! | GCTCATTGCTTTACCCATTT+TGG | - | chr4_2:55362297-55362316 | Msa0608370:intron | 40.0% |
| !!! | TTTACCCATTTTGGCCTTAC+AGG | - | chr4_2:55362306-55362325 | Msa0608370:intron | 40.0% |
| TTGTCCTGTAAGGCCAAAAT+GGG | + | chr4_2:55362313-55362332 | None:intergenic | 40.0% | |
| AAGCAAGGGAAAACAACTCA+TGG | + | chr4_2:55362387-55362406 | None:intergenic | 40.0% | |
| ! | GTTTTCCCTTGCTTCTATGA+AGG | - | chr4_2:55362393-55362412 | Msa0608370:intron | 40.0% |
| GCAAACCTTCATAGAAGCAA+GGG | + | chr4_2:55362401-55362420 | None:intergenic | 40.0% | |
| AGCAAACCTTCATAGAAGCA+AGG | + | chr4_2:55362402-55362421 | None:intergenic | 40.0% | |
| ATCATGAAGACAAGCAACCA+AGG | - | chr4_2:55362477-55362496 | Msa0608370:intron | 40.0% | |
| GCGCACAATATTTATTTGGG+GGG | - | chr4_2:55362577-55362596 | Msa0608370:intron | 40.0% | |
| GATAGGAGATCTACTTTGAC+TGG | - | chr4_2:55362763-55362782 | Msa0608370:intron | 40.0% | |
| ! | CTTTTGAGCTAGTGAGTCTT+GGG | - | chr4_2:55362807-55362826 | Msa0608370:intron | 40.0% |
| ACTCAAATGATGTGCCCAAA+TGG | + | chr4_2:55362842-55362861 | None:intergenic | 40.0% | |
| !! | CTTTCTGGTTTCCTTCTGAA+GGG | + | chr4_2:55363071-55363090 | None:intergenic | 40.0% |
| !! | TCTTTCTGGTTTCCTTCTGA+AGG | + | chr4_2:55363072-55363091 | None:intergenic | 40.0% |
| ATCCTTCTTACCCTAAAACC+CGG | + | chr4_2:55363260-55363279 | None:intergenic | 40.0% | |
| !!! | GTTTTAGGGTAAGAAGGATC+TGG | - | chr4_2:55363261-55363280 | Msa0608370:CDS | 40.0% |
| GAACGTAAAAGGTGATTGAC+GGG | - | chr4_2:55363397-55363416 | Msa0608370:CDS | 40.0% | |
| AAAGTTGGGGGTTATGTTAC+GGG | - | chr4_2:55363529-55363548 | Msa0608370:intron | 40.0% | |
| GGTTATGTTACGGGTAAAGT+TGG | - | chr4_2:55363538-55363557 | Msa0608370:intron | 40.0% | |
| TATGTTACGGGTAAAGTTGG+GGG | - | chr4_2:55363541-55363560 | Msa0608370:intron | 40.0% | |
| AAAGTTGGGGGTTATGTTAC+GGG | - | chr4_2:55363529-55363548 | Msa0608370:intron | 40.0% | |
| TAAAGTGATGTTGTGAGGGA+AGG | - | chr4_2:55363588-55363607 | Msa0608370:CDS | 40.0% | |
| !! | TCTGTTGGTCTTTCATAACC+GGG | - | chr4_2:55363714-55363733 | Msa0608370:intron | 40.0% |
| TAGATGTAGTTACACGAGTC+TGG | - | chr4_2:55363913-55363932 | Msa0608370:intron | 40.0% | |
| TAAACAAGGTGACAGCATAG+TGG | + | chr4_2:55364019-55364038 | None:intergenic | 40.0% | |
| TATATAACTCCCAAACCGGA+AGG | + | chr4_2:55364088-55364107 | None:intergenic | 40.0% | |
| !! | CCGGTTTGGGAGTTATATAA+AGG | - | chr4_2:55364089-55364108 | Msa0608370:intron | 40.0% |
| AAAATACCAGTCCTAAAGGG+AGG | + | chr4_2:55364298-55364317 | None:intergenic | 40.0% | |
| ! | CTGATCTTTTCAGCAACAAG+AGG | + | chr4_2:55364664-55364683 | None:intergenic | 40.0% |
| GAATCATCGGAATCAGTTTC+AGG | + | chr4_2:55364802-55364821 | None:intergenic | 40.0% | |
| CTTATGCTAAGAAGATGCTG+AGG | - | chr4_2:55364872-55364891 | Msa0608370:intron | 40.0% | |
| AGATGCTGAGGAAAAAGCAA+AGG | - | chr4_2:55364884-55364903 | Msa0608370:intron | 40.0% | |
| GATGCTGAGGAAAAAGCAAA+GGG | - | chr4_2:55364885-55364904 | Msa0608370:intron | 40.0% | |
| TGATACTAGACCTGCAAAGA+AGG | - | chr4_2:55365059-55365078 | Msa0608370:intron | 40.0% | |
| !! | ATATAGCATTGGCCTTCTTG+CGG | + | chr4_2:55365140-55365159 | None:intergenic | 40.0% |
| TGGCTGATCTGATATAGCAT+TGG | + | chr4_2:55365151-55365170 | None:intergenic | 40.0% | |
| TTGGAACGATCAGATATGTC+TGG | + | chr4_2:55365171-55365190 | None:intergenic | 40.0% | |
| ! | TCGGTCAATTTGCTTACTCT+TGG | + | chr4_2:55365190-55365209 | None:intergenic | 40.0% |
| TGTTCCAAAAAGGCCTCAAA+AGG | - | chr4_2:55365224-55365243 | Msa0608370:intron | 40.0% | |
| !!! | TACTCCTTTTGAGGCCTTTT+TGG | + | chr4_2:55365231-55365250 | None:intergenic | 40.0% |
| ! | GCAACTACATACTCCTTTTG+AGG | + | chr4_2:55365240-55365259 | None:intergenic | 40.0% |
| GAGTATGTAGTTGCGAAGAA+AGG | - | chr4_2:55365246-55365265 | Msa0608370:intron | 40.0% | |
| GTATGTAGTTGCGAAGAAAG+GGG | - | chr4_2:55365248-55365267 | Msa0608370:intron | 40.0% | |
| AGGAAAAGTGGTATGGGTAA+GGG | - | chr4_2:55365330-55365349 | Msa0608370:CDS | 40.0% | |
| AAAAGAGGTTCCAAGGCAAA+GGG | - | chr4_2:55365357-55365376 | Msa0608370:CDS | 40.0% | |
| GAGATTGAAGTTGAAGGAGG+AGG | + | chr4_2:55359481-55359500 | None:intergenic | 45.0% | |
| AGAACGGTAACCGTGTTCTT+TGG | + | chr4_2:55359580-55359599 | None:intergenic | 45.0% | |
| GTTTCCATGATGCACGAGAA+CGG | + | chr4_2:55359596-55359615 | None:intergenic | 45.0% | |
| TCCGATAACGAGATGATCGA+CGG | + | chr4_2:55359724-55359743 | None:intergenic | 45.0% | |
| CATGATGGTTCTCCCAATGT+TGG | - | chr4_2:55359876-55359895 | Msa0608370:CDS | 45.0% | |
| GTCGCAGGATTACAATTCTG+TGG | - | chr4_2:55360103-55360122 | Msa0608370:CDS | 45.0% | |
| TGTGGTGTGGTGTATGAAGA+AGG | - | chr4_2:55360121-55360140 | Msa0608370:CDS | 45.0% | |
| AGTTGAAACACGGGGCTAAA+AGG | - | chr4_2:55360468-55360487 | Msa0608370:CDS | 45.0% | |
| GTTGAAACACGGGGCTAAAA+GGG | - | chr4_2:55360469-55360488 | Msa0608370:CDS | 45.0% | |
| AGTTGAGGTGGAAAAACCAC+CGG | - | chr4_2:55360783-55360802 | Msa0608370:CDS | 45.0% | |
| TGCGAGGATCAATCTTAGCA+GGG | + | chr4_2:55360861-55360880 | None:intergenic | 45.0% | |
| ATGCGAGGATCAATCTTAGC+AGG | + | chr4_2:55360862-55360881 | None:intergenic | 45.0% | |
| TGCTTGATATCGAGAATGCG+AGG | + | chr4_2:55360877-55360896 | None:intergenic | 45.0% | |
| ATCTGCTCAACCGATAGCTA+AGG | - | chr4_2:55360909-55360928 | Msa0608370:intron | 45.0% | |
| !! | ATGCAGATGGTGGATGTACT+TGG | - | chr4_2:55361014-55361033 | Msa0608370:intron | 45.0% |
| !! | AAGCAAAAGAGGCATCGTGA+CGG | - | chr4_2:55361044-55361063 | Msa0608370:intron | 45.0% |
| TGTTTGGACAGATACTCCTC+TGG | - | chr4_2:55361404-55361423 | Msa0608370:CDS | 45.0% | |
| ! | GATACTCCTCTGGAGATTCT+TGG | - | chr4_2:55361414-55361433 | Msa0608370:CDS | 45.0% |
| ACTGAACCAAGAATCTCCAG+AGG | + | chr4_2:55361423-55361442 | None:intergenic | 45.0% | |
| ! | ATCTGCTGGTTATCTCTAGG+TGG | - | chr4_2:55361836-55361855 | Msa0608370:intron | 45.0% |
| GGTGGAAAATGAGCATGATG+TGG | - | chr4_2:55361921-55361940 | Msa0608370:CDS | 45.0% | |
| GGAAAATGAGCATGATGTGG+TGG | - | chr4_2:55361924-55361943 | Msa0608370:CDS | 45.0% | |
| GGAGGAACTGACAAATGCAA+TGG | - | chr4_2:55361975-55361994 | Msa0608370:CDS | 45.0% | |
| CTTGTCCTGTAAGGCCAAAA+TGG | + | chr4_2:55362314-55362333 | None:intergenic | 45.0% | |
| !!! | CATTTTGGCCTTACAGGACA+AGG | - | chr4_2:55362312-55362331 | Msa0608370:intron | 45.0% |
| ! | CAGCACTTGATTTGAGATGG+AGG | + | chr4_2:55362440-55362459 | None:intergenic | 45.0% |
| ! | GCTTTTGAGCTAGTGAGTCT+TGG | - | chr4_2:55362806-55362825 | Msa0608370:intron | 45.0% |
| TTGGGTGGTCACAACCATTT+GGG | - | chr4_2:55362825-55362844 | Msa0608370:intron | 45.0% | |
| ! | GTTGACACCACTGACTATGA+AGG | - | chr4_2:55363289-55363308 | Msa0608370:CDS | 45.0% |
| ACTGACTATGAAGGTGGTGA+GGG | - | chr4_2:55363298-55363317 | Msa0608370:CDS | 45.0% | |
| ! | AGGGAAGGCATATAAGTGAG+AGG | - | chr4_2:55363603-55363622 | Msa0608370:CDS | 45.0% |
| ! | GGGAAGGCATATAAGTGAGA+GGG | - | chr4_2:55363604-55363623 | Msa0608370:CDS | 45.0% |
| !! | CTGTTGGTCTTTCATAACCG+GGG | - | chr4_2:55363715-55363734 | Msa0608370:intron | 45.0% |
| AAGTTGGGAGTCTGCATCAT+AGG | + | chr4_2:55363865-55363884 | None:intergenic | 45.0% | |
| ! | TGATGCAGACTCCCAACTTT+TGG | - | chr4_2:55363866-55363885 | Msa0608370:CDS | 45.0% |
| !! | ACTCCCAACTTTTGGAGGTA+TGG | - | chr4_2:55363874-55363893 | Msa0608370:CDS | 45.0% |
| GCTCCATACCTCCAAAAGTT+GGG | + | chr4_2:55363880-55363899 | None:intergenic | 45.0% | |
| AGCTCCATACCTCCAAAAGT+TGG | + | chr4_2:55363881-55363900 | None:intergenic | 45.0% | |
| TTACCTGCTTACCTCCCTTT+AGG | - | chr4_2:55364284-55364303 | Msa0608370:intron | 45.0% | |
| !!! | TTACCTTTTGGCTTGTAGGC+TGG | - | chr4_2:55364412-55364431 | Msa0608370:CDS | 45.0% |
| TCTGTAAGTGGCACCATCAA+AGG | + | chr4_2:55364505-55364524 | None:intergenic | 45.0% | |
| !! | TTGATGGTGCCACTTACAGA+TGG | - | chr4_2:55364505-55364524 | Msa0608370:intron | 45.0% |
| ! | TGCCACTTACAGATGGTACA+GGG | - | chr4_2:55364512-55364531 | Msa0608370:intron | 45.0% |
| TTTGTGATCTCCTCTTGGGT+GGG | + | chr4_2:55364538-55364557 | None:intergenic | 45.0% | |
| ATTTGTGATCTCCTCTTGGG+TGG | + | chr4_2:55364539-55364558 | None:intergenic | 45.0% | |
| TGTCTTTGCTGAAGCTGTAG+AGG | - | chr4_2:55364576-55364595 | Msa0608370:intron | 45.0% | |
| TTTGCTGAAGCTGTAGAGGA+AGG | - | chr4_2:55364580-55364599 | Msa0608370:intron | 45.0% | |
| GGATGACAGCGAGAATGAAA+TGG | - | chr4_2:55364615-55364634 | Msa0608370:intron | 45.0% | |
| TTCATCATCTGATGAGTCGG+AGG | - | chr4_2:55364819-55364838 | Msa0608370:intron | 45.0% | |
| TCCTCATCCAGAAACCACTT+GGG | + | chr4_2:55364964-55364983 | None:intergenic | 45.0% | |
| TTCCTCATCCAGAAACCACT+TGG | + | chr4_2:55364965-55364984 | None:intergenic | 45.0% | |
| TGACAGGCTTAACTGGTACA+CGG | + | chr4_2:55364996-55365015 | None:intergenic | 45.0% | |
| TCTTTCGTGACAGGCTTAAC+TGG | + | chr4_2:55365003-55365022 | None:intergenic | 45.0% | |
| AGTTAAGCCTGTCACGAAAG+AGG | - | chr4_2:55365002-55365021 | Msa0608370:intron | 45.0% | |
| TACTAGACCTGCAAAGAAGG+TGG | - | chr4_2:55365062-55365081 | Msa0608370:intron | 45.0% | |
| GATTGAGAAAGTCCGCAAGA+AGG | - | chr4_2:55365125-55365144 | Msa0608370:intron | 45.0% | |
| GAAGAAAGGGGTCCAAGTTA+AGG | - | chr4_2:55365260-55365279 | Msa0608370:intron | 45.0% | |
| GTCCAAGTTAAGGCTGGTAA+GGG | - | chr4_2:55365270-55365289 | Msa0608370:intron | 45.0% | |
| TTCCCTTACCAGCCTTAACT+TGG | + | chr4_2:55365275-55365294 | None:intergenic | 45.0% | |
| GAAAAGTCCTTGTTGATCGC+AGG | - | chr4_2:55365292-55365311 | Msa0608370:CDS | 45.0% | |
| TCTTCATCCTGCGATCAACA+AGG | + | chr4_2:55365302-55365321 | None:intergenic | 45.0% | |
| AAGAGTGATGCGAGGAAAAG+TGG | - | chr4_2:55365318-55365337 | Msa0608370:CDS | 45.0% | |
| TGATGCGAGGAAAAGTGGTA+TGG | - | chr4_2:55365323-55365342 | Msa0608370:CDS | 45.0% | |
| GATGCGAGGAAAAGTGGTAT+GGG | - | chr4_2:55365324-55365343 | Msa0608370:CDS | 45.0% | |
| GAGGAAAAGTGGTATGGGTA+AGG | - | chr4_2:55365329-55365348 | Msa0608370:CDS | 45.0% | |
| AAAAGTGGTATGGGTAAGGG+AGG | - | chr4_2:55365333-55365352 | Msa0608370:CDS | 45.0% | |
| CAAAAGAGGTTCCAAGGCAA+AGG | - | chr4_2:55365356-55365375 | Msa0608370:CDS | 45.0% | |
| !!! | TTTTTTATTTATTTTATATC+TGG | - | chr4_2:55361798-55361817 | Msa0608370:intron | 5.0% |
| !!! | TTTTTATTTATTTTATATCT+GGG | - | chr4_2:55361799-55361818 | Msa0608370:intron | 5.0% |
| GTTACCGTTCTCGTGCATCA+TGG | - | chr4_2:55359589-55359608 | Msa0608370:three_prime_UTR | 50.0% | |
| AGCGTGAGGATTCGAGGAAA+TGG | + | chr4_2:55359641-55359660 | None:intergenic | 50.0% | |
| ATCGACGGGAACACGTTGAA+CGG | + | chr4_2:55359709-55359728 | None:intergenic | 50.0% | |
| CCGATAACGAGATGATCGAC+GGG | + | chr4_2:55359723-55359742 | None:intergenic | 50.0% | |
| CCCGTCGATCATCTCGTTAT+CGG | - | chr4_2:55359720-55359739 | Msa0608370:three_prime_UTR | 50.0% | |
| GCTCCGATTAAACCACTTCG+AGG | - | chr4_2:55359753-55359772 | Msa0608370:exon | 50.0% | |
| GCGCCTCGAAGTGGTTTAAT+CGG | + | chr4_2:55359759-55359778 | None:intergenic | 50.0% | |
| GATGGTTCTCCCAATGTTGG+TGG | - | chr4_2:55359879-55359898 | Msa0608370:CDS | 50.0% | |
| !! | TCCCAATGTTGGTGGTGCTT+GGG | - | chr4_2:55359887-55359906 | Msa0608370:CDS | 50.0% |
| !!! | GTGATAGGTTTTCAGGTCGC+AGG | - | chr4_2:55360088-55360107 | Msa0608370:CDS | 50.0% |
| GCAGATTCAGAACGACTAGC+CGG | + | chr4_2:55360805-55360824 | None:intergenic | 50.0% | |
| GCGAGGATCAATCTTAGCAG+GGG | + | chr4_2:55360860-55360879 | None:intergenic | 50.0% | |
| !! | AGCAAAAGAGGCATCGTGAC+GGG | - | chr4_2:55361045-55361064 | Msa0608370:intron | 50.0% |
| ! | TGCTGGTTATCTCTAGGTGG+CGG | - | chr4_2:55361839-55361858 | Msa0608370:intron | 50.0% |
| !! | GCAGGTTCGGTCTTTTTAGC+AGG | + | chr4_2:55361889-55361908 | None:intergenic | 50.0% |
| ! | GTGTTCCCCAAAGTACTCAG+TGG | + | chr4_2:55362070-55362089 | None:intergenic | 50.0% |
| TTTCCGTGCCTTGTCCTGTA+AGG | + | chr4_2:55362323-55362342 | None:intergenic | 50.0% | |
| ACAAGGCACGGAAAGCAACA+GGG | - | chr4_2:55362329-55362348 | Msa0608370:intron | 50.0% | |
| GAAAGCAACAGGGATGCAAG+TGG | - | chr4_2:55362339-55362358 | Msa0608370:intron | 50.0% | |
| TTGAGCTAGTGAGTCTTGGG+TGG | - | chr4_2:55362810-55362829 | Msa0608370:intron | 50.0% | |
| CTTGGGTGGTCACAACCATT+TGG | - | chr4_2:55362824-55362843 | Msa0608370:intron | 50.0% | |
| CGTTTCTTGGTTGTCGTCAC+CGG | - | chr4_2:55363238-55363257 | Msa0608370:CDS | 50.0% | |
| GTTTCTTGGTTGTCGTCACC+GGG | - | chr4_2:55363239-55363258 | Msa0608370:CDS | 50.0% | |
| ! | GTTGTCGTCACCGGGTTTTA+GGG | - | chr4_2:55363247-55363266 | Msa0608370:CDS | 50.0% |
| !!! | CACCGGGTTTTAGGGTAAGA+AGG | - | chr4_2:55363255-55363274 | Msa0608370:CDS | 50.0% |
| ! | GACACCACTGACTATGAAGG+TGG | - | chr4_2:55363292-55363311 | Msa0608370:CDS | 50.0% |
| CTCACCACCTTCATAGTCAG+TGG | + | chr4_2:55363299-55363318 | None:intergenic | 50.0% | |
| ! | CACTGACTATGAAGGTGGTG+AGG | - | chr4_2:55363297-55363316 | Msa0608370:CDS | 50.0% |
| TATGCACACGCCTCAACTCA+AGG | - | chr4_2:55363502-55363521 | Msa0608370:intron | 50.0% | |
| ! | TGCAGACTCCCAACTTTTGG+AGG | - | chr4_2:55363869-55363888 | Msa0608370:CDS | 50.0% |
| AGCATAGTGGCATCCACTAG+GGG | + | chr4_2:55364006-55364025 | None:intergenic | 50.0% | |
| CAGCATAGTGGCATCCACTA+GGG | + | chr4_2:55364007-55364026 | None:intergenic | 50.0% | |
| ACAGCATAGTGGCATCCACT+AGG | + | chr4_2:55364008-55364027 | None:intergenic | 50.0% | |
| AGTCCTAAAGGGAGGTAAGC+AGG | + | chr4_2:55364290-55364309 | None:intergenic | 50.0% | |
| !! | TGCTTACCTCCCTTTAGGAC+TGG | - | chr4_2:55364289-55364308 | Msa0608370:intron | 50.0% |
| TCACCAGCCTACAAGCCAAA+AGG | + | chr4_2:55364418-55364437 | None:intergenic | 50.0% | |
| !! | GTGCCACTTACAGATGGTAC+AGG | - | chr4_2:55364511-55364530 | Msa0608370:intron | 50.0% |
| !! | AGAGGAAGGAGGCTTTGAGA+AGG | - | chr4_2:55364594-55364613 | Msa0608370:intron | 50.0% |
| ! | TCGGAATCAGTTTCAGGTGC+AGG | + | chr4_2:55364796-55364815 | None:intergenic | 50.0% |
| GATGAGTCGGAGGATGATGT+TGG | - | chr4_2:55364829-55364848 | Msa0608370:intron | 50.0% | |
| GCAACATCCTCTTTCGTGAC+AGG | + | chr4_2:55365012-55365031 | None:intergenic | 50.0% | |
| AACACGCTTCTTCCGTGCTT+TGG | + | chr4_2:55365094-55365113 | None:intergenic | 50.0% | |
| ! | GGAAGAAGCGTGTTGCAATG+AGG | - | chr4_2:55365100-55365119 | Msa0608370:intron | 50.0% |
| AAAGGGGTCCAAGTTAAGGC+TGG | - | chr4_2:55365264-55365283 | Msa0608370:intron | 50.0% | |
| GGTCCAAGTTAAGGCTGGTA+AGG | - | chr4_2:55365269-55365288 | Msa0608370:intron | 50.0% | |
| ATGGGTAAGGGAGGCAAAAG+AGG | - | chr4_2:55365342-55365361 | Msa0608370:CDS | 50.0% | |
| AAAGGGTGGCAAGTCACCAA+AGG | - | chr4_2:55365374-55365393 | Msa0608370:CDS | 50.0% | |
| AAGGGTGGCAAGTCACCAAA+GGG | - | chr4_2:55365375-55365394 | Msa0608370:CDS | 50.0% | |
| GACTTGCATCCAACCACCAG+GGG | + | chr4_2:55359685-55359704 | None:intergenic | 55.0% | |
| CGACTTGCATCCAACCACCA+GGG | + | chr4_2:55359686-55359705 | None:intergenic | 55.0% | |
| ATAGCAATCGCGCCTCGAAG+TGG | + | chr4_2:55359768-55359787 | None:intergenic | 55.0% | |
| ! | TCGAGGCGCGATTGCTATTC+AGG | - | chr4_2:55359770-55359789 | Msa0608370:CDS | 55.0% |
| !! | CTCCCAATGTTGGTGGTGCT+TGG | - | chr4_2:55359886-55359905 | Msa0608370:CDS | 55.0% |
| GCCCAAGCACCACCAACATT+GGG | + | chr4_2:55359891-55359910 | None:intergenic | 55.0% | |
| AGCCCAAGCACCACCAACAT+TGG | + | chr4_2:55359892-55359911 | None:intergenic | 55.0% | |
| ! | GATTCAGAACGACTAGCCGG+TGG | + | chr4_2:55360802-55360821 | None:intergenic | 55.0% |
| CTCAGCTGTAGCAGCAGGTT+CGG | + | chr4_2:55361902-55361921 | None:intergenic | 55.0% | |
| ! | TGGCCTTACAGGACAAGGCA+CGG | - | chr4_2:55362317-55362336 | Msa0608370:intron | 55.0% |
| GACAAGGCACGGAAAGCAAC+AGG | - | chr4_2:55362328-55362347 | Msa0608370:intron | 55.0% | |
| ! | GGTTGTCGTCACCGGGTTTT+AGG | - | chr4_2:55363246-55363265 | Msa0608370:CDS | 55.0% |
| TGAAGGTGGTGAGGGTGAAG+TGG | - | chr4_2:55363306-55363325 | Msa0608370:CDS | 55.0% | |
| GATTTAGTGGCTCCCCCTAG+TGG | - | chr4_2:55363990-55364009 | Msa0608370:intron | 55.0% | |
| GCATAGTGGCATCCACTAGG+GGG | + | chr4_2:55364005-55364024 | None:intergenic | 55.0% | |
| GGCCCTGTACCATCTGTAAG+TGG | + | chr4_2:55364517-55364536 | None:intergenic | 55.0% | |
| GCTGAAGCTGTAGAGGAAGG+AGG | - | chr4_2:55364583-55364602 | Msa0608370:intron | 55.0% | |
| ATGACCAGGGATTGCCCAAG+TGG | - | chr4_2:55364947-55364966 | Msa0608370:intron | 55.0% | |
| GAAACCACTTGGGCAATCCC+TGG | + | chr4_2:55364954-55364973 | None:intergenic | 55.0% | |
| GGGATTGCCCAAGTGGTTTC+TGG | - | chr4_2:55364954-55364973 | Msa0608370:intron | 55.0% | |
| ! | GCCCAAGTGGTTTCTGGATG+AGG | - | chr4_2:55364960-55364979 | Msa0608370:intron | 55.0% |
| ACCTGCAAAGAAGGTGGCTG+AGG | - | chr4_2:55365068-55365087 | Msa0608370:intron | 55.0% | |
| GCAGGATGAAGAGTGATGCG+AGG | - | chr4_2:55365310-55365329 | Msa0608370:CDS | 55.0% | |
| GGGAGGCAAAAGAGGTTCCA+AGG | - | chr4_2:55365350-55365369 | Msa0608370:CDS | 55.0% | |
| AGAGGTTCCAAGGCAAAGGG+TGG | - | chr4_2:55365360-55365379 | Msa0608370:CDS | 55.0% | |
| ! | TGACTTGCCACCCTTTGCCT+TGG | + | chr4_2:55365370-55365389 | None:intergenic | 55.0% |
| CAAGTCACCAAAGGGTGGCA+AGG | - | chr4_2:55365383-55365402 | Msa0608370:CDS | 55.0% | |
| !! | TTTGGTGCCTTGCCACCCTT+TGG | + | chr4_2:55365393-55365412 | None:intergenic | 55.0% |
| ! | AAAGGGTGGCAAGGCACCAA+AGG | - | chr4_2:55365392-55365411 | Msa0608370:CDS | 55.0% |
| ! | AAGGGTGGCAAGGCACCAAA+GGG | - | chr4_2:55365393-55365412 | Msa0608370:CDS | 55.0% |
| TCCGAGTGGCAAGGTTCCTA+TGG | - | chr4_2:55365425-55365444 | Msa0608370:CDS | 55.0% | |
| CCCATAGGAACCTTGCCACT+CGG | + | chr4_2:55365429-55365448 | None:intergenic | 55.0% | |
| CCGAGTGGCAAGGTTCCTAT+GGG | - | chr4_2:55365426-55365445 | Msa0608370:CDS | 55.0% | |
| AGTGGCAAGGTTCCTATGGG+TGG | - | chr4_2:55365429-55365448 | Msa0608370:CDS | 55.0% | |
| ! | CAAGGCACCAAAGGGTAGCA+GGG | - | chr4_2:55365455-55365474 | Msa0608370:CDS | 55.0% |
| GAACGGAGCGTGAGGATTCG+AGG | + | chr4_2:55359647-55359666 | None:intergenic | 60.0% | |
| GAGATCGAGAACGGAGCGTG+AGG | + | chr4_2:55359655-55359674 | None:intergenic | 60.0% | |
| TTGCATCCAACCACCAGGGG+CGG | + | chr4_2:55359682-55359701 | None:intergenic | 60.0% | |
| GCGACTTGCATCCAACCACC+AGG | + | chr4_2:55359687-55359706 | None:intergenic | 60.0% | |
| CGAACCTGCTGCTACAGCTG+AGG | - | chr4_2:55361900-55361919 | Msa0608370:CDS | 60.0% | |
| ACCTGCTGCTACAGCTGAGG+TGG | - | chr4_2:55361903-55361922 | Msa0608370:CDS | 60.0% | |
| TCCACCTCAGCTGTAGCAGC+AGG | + | chr4_2:55361907-55361926 | None:intergenic | 60.0% | |
| GCCTCAGCCACCTTCTTTGC+AGG | + | chr4_2:55365072-55365091 | None:intergenic | 60.0% | |
| AGGTGGCTGAGGCCAAAGCA+CGG | - | chr4_2:55365079-55365098 | Msa0608370:intron | 60.0% | |
| GGTGGCAAGTCACCAAAGGG+TGG | - | chr4_2:55365378-55365397 | Msa0608370:CDS | 60.0% | |
| ! | CAAGGCACCAAAGGGTGGCA+GGG | - | chr4_2:55365401-55365420 | Msa0608370:CDS | 60.0% |
| GGCAAGGTTCCTATGGGTGG+TGG | - | chr4_2:55365432-55365451 | Msa0608370:CDS | 60.0% | |
| ! | GGTTCCTATGGGTGGTGGCA+AGG | - | chr4_2:55365437-55365456 | Msa0608370:CDS | 60.0% |
| ! | GGTGGTGGCAAGGCACCAAA+GGG | - | chr4_2:55365447-55365466 | Msa0608370:CDS | 60.0% |
| ! | GCAAGGCACCAAAGGGTAGC+AGG | - | chr4_2:55365454-55365473 | Msa0608370:CDS | 60.0% |
| CTCGAAGCCCTGCTACCCTT+TGG | + | chr4_2:55365465-55365484 | None:intergenic | 60.0% | |
| AAGGGTAGCAGGGCTTCGAG+CGG | - | chr4_2:55365465-55365484 | Msa0608370:CDS | 60.0% | |
| AGGGCTTCGAGCGGCAAGAA+GGG | - | chr4_2:55365474-55365493 | Msa0608370:CDS | 60.0% | |
| CTTCGAGCGGCAAGAAGGGA+AGG | - | chr4_2:55365478-55365497 | Msa0608370:CDS | 60.0% | |
| GGCGGCGCAGAGATCGAGAA+CGG | + | chr4_2:55359664-55359683 | None:intergenic | 65.0% | |
| TGGTACAGGGCCCACCCAAG+AGG | - | chr4_2:55364525-55364544 | Msa0608370:intron | 65.0% | |
| ! | GGTGGCAAGGCACCAAAGGG+TGG | - | chr4_2:55365396-55365415 | Msa0608370:CDS | 65.0% |
| ! | GCAAGGCACCAAAGGGTGGC+AGG | - | chr4_2:55365400-55365419 | Msa0608370:CDS | 65.0% |
| GGTGCCTTGCCACCACCCAT+AGG | + | chr4_2:55365444-55365463 | None:intergenic | 65.0% | |
| ! | GGGTGGTGGCAAGGCACCAA+AGG | - | chr4_2:55365446-55365465 | Msa0608370:CDS | 65.0% |
| CAGGGCTTCGAGCGGCAAGA+AGG | - | chr4_2:55365473-55365492 | Msa0608370:CDS | 65.0% | |
| CTCGGAGCCCTGCCACCCTT+TGG | + | chr4_2:55365411-55365430 | None:intergenic | 70.0% | |
| AAGGGTGGCAGGGCTCCGAG+TGG | - | chr4_2:55365411-55365430 | Msa0608370:CDS | 70.0% | |
| TGGCAGGGCTCCGAGTGGCA+AGG | - | chr4_2:55365416-55365435 | Msa0608370:CDS | 70.0% | |
| CTCGATCTCTGCGCCGCCCC+TGG | - | chr4_2:55359666-55359685 | Msa0608370:three_prime_UTR | 75.0% | |
| GATCTCTGCGCCGCCCCTGG+TGG | - | chr4_2:55359669-55359688 | Msa0608370:three_prime_UTR | 75.0% | |
| TCTGCGCCGCCCCTGGTGGT+TGG | - | chr4_2:55359673-55359692 | Msa0608370:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 55359468 | 55365807 | 55359468 | ID=Msa0608370;Name=Msa0608370 |
| chr4_2 | mRNA | 55359468 | 55365807 | 55359468 | ID=Msa0608370-mRNA-1;Parent=Msa0608370;Name=Msa0608370-mRNA-1;_AED=0.05;_eAED=0.05;_QI=54|1|1|1|1|1|11|301|858 |
| chr4_2 | exon | 55359468 | 55360845 | 55359468 | ID=Msa0608370-mRNA-1:exon:14075;Parent=Msa0608370-mRNA-1 |
| chr4_2 | exon | 55361385 | 55361511 | 55361385 | ID=Msa0608370-mRNA-1:exon:14074;Parent=Msa0608370-mRNA-1 |
| chr4_2 | exon | 55361868 | 55362007 | 55361868 | ID=Msa0608370-mRNA-1:exon:14073;Parent=Msa0608370-mRNA-1 |
| chr4_2 | exon | 55362861 | 55362947 | 55362861 | ID=Msa0608370-mRNA-1:exon:14072;Parent=Msa0608370-mRNA-1 |
| chr4_2 | exon | 55363228 | 55363420 | 55363228 | ID=Msa0608370-mRNA-1:exon:14071;Parent=Msa0608370-mRNA-1 |
| chr4_2 | exon | 55363571 | 55363632 | 55363571 | ID=Msa0608370-mRNA-1:exon:14070;Parent=Msa0608370-mRNA-1 |
| chr4_2 | exon | 55363766 | 55363922 | 55363766 | ID=Msa0608370-mRNA-1:exon:14069;Parent=Msa0608370-mRNA-1 |
| chr4_2 | exon | 55364209 | 55364255 | 55364209 | ID=Msa0608370-mRNA-1:exon:14068;Parent=Msa0608370-mRNA-1 |
| chr4_2 | exon | 55364345 | 55364503 | 55364345 | ID=Msa0608370-mRNA-1:exon:14067;Parent=Msa0608370-mRNA-1 |
| chr4_2 | exon | 55365133 | 55365180 | 55365133 | ID=Msa0608370-mRNA-1:exon:14066;Parent=Msa0608370-mRNA-1 |
| chr4_2 | exon | 55365274 | 55365807 | 55365274 | ID=Msa0608370-mRNA-1:exon:14065;Parent=Msa0608370-mRNA-1 |
| chr4_2 | five_prime_UTR | 55365754 | 55365807 | 55365754 | ID=Msa0608370-mRNA-1:five_prime_utr;Parent=Msa0608370-mRNA-1 |
| chr4_2 | CDS | 55365274 | 55365753 | 55365274 | ID=Msa0608370-mRNA-1:cds;Parent=Msa0608370-mRNA-1 |
| chr4_2 | CDS | 55365133 | 55365180 | 55365133 | ID=Msa0608370-mRNA-1:cds;Parent=Msa0608370-mRNA-1 |
| chr4_2 | CDS | 55364345 | 55364503 | 55364345 | ID=Msa0608370-mRNA-1:cds;Parent=Msa0608370-mRNA-1 |
| chr4_2 | CDS | 55364209 | 55364255 | 55364209 | ID=Msa0608370-mRNA-1:cds;Parent=Msa0608370-mRNA-1 |
| chr4_2 | CDS | 55363766 | 55363922 | 55363766 | ID=Msa0608370-mRNA-1:cds;Parent=Msa0608370-mRNA-1 |
| chr4_2 | CDS | 55363571 | 55363632 | 55363571 | ID=Msa0608370-mRNA-1:cds;Parent=Msa0608370-mRNA-1 |
| chr4_2 | CDS | 55363228 | 55363420 | 55363228 | ID=Msa0608370-mRNA-1:cds;Parent=Msa0608370-mRNA-1 |
| chr4_2 | CDS | 55362861 | 55362947 | 55362861 | ID=Msa0608370-mRNA-1:cds;Parent=Msa0608370-mRNA-1 |
| chr4_2 | CDS | 55361868 | 55362007 | 55361868 | ID=Msa0608370-mRNA-1:cds;Parent=Msa0608370-mRNA-1 |
| chr4_2 | CDS | 55361385 | 55361511 | 55361385 | ID=Msa0608370-mRNA-1:cds;Parent=Msa0608370-mRNA-1 |
| chr4_2 | CDS | 55359769 | 55360845 | 55359769 | ID=Msa0608370-mRNA-1:cds;Parent=Msa0608370-mRNA-1 |
| chr4_2 | three_prime_UTR | 55359468 | 55359768 | 55359468 | ID=Msa0608370-mRNA-1:three_prime_utr;Parent=Msa0608370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
