Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0614210 | XP_003608443.2 | 93.715 | 541 | 11 | 2 | 1 | 524 | 1 | 535 | 0.0 | 1020 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0614210 | sp|P47924|RIBA1_ARATH | 74.950 | 499 | 90 | 5 | 42 | 505 | 32 | 530 | 0.0 | 749 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0614210 | A0A396IAS6 | 93.715 | 541 | 11 | 2 | 1 | 524 | 1 | 535 | 0.0 | 1020 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0614210 | 0.827773 | 1.299939e-54 | -8.615850e-47 |
| Msa0017940 | Msa0614210 | 0.815383 | 9.511098e-52 | -8.615850e-47 |
| Msa0030310 | Msa0614210 | 0.820226 | 7.669536e-53 | -8.615850e-47 |
| Msa0607290 | Msa0614210 | -0.820366 | 7.124228e-53 | -8.615850e-47 |
| Msa0614210 | Msa0620090 | 0.809100 | 2.235417e-50 | -8.615850e-47 |
| Msa0614210 | Msa0638690 | 0.911896 | 3.616329e-83 | -8.615850e-47 |
| Msa0614210 | Msa0639120 | 0.805564 | 1.256213e-49 | -8.615850e-47 |
| Msa0614210 | Msa0659960 | 0.805308 | 1.421229e-49 | -8.615850e-47 |
| Msa0614210 | Msa0697400 | 0.866668 | 2.410293e-65 | -8.615850e-47 |
| Msa0614210 | Msa0706530 | 0.813471 | 2.517621e-51 | -8.615850e-47 |
| Msa0614210 | Msa0717090 | 0.822467 | 2.332398e-53 | -8.615850e-47 |
| Msa0614210 | Msa0768810 | 0.830614 | 2.658930e-55 | -8.615850e-47 |
| Msa0614210 | Msa0824730 | 0.818652 | 1.752867e-52 | -8.615850e-47 |
| Msa0614210 | Msa0852730 | 0.828909 | 6.918536e-55 | -8.615850e-47 |
| Msa0614210 | Msa0900320 | 0.810323 | 1.220285e-50 | -8.615850e-47 |
| Msa0614210 | Msa0942730 | 0.804734 | 1.874294e-49 | -8.615850e-47 |
| Msa0614210 | Msa0965960 | 0.809765 | 1.609308e-50 | -8.615850e-47 |
| Msa0614210 | Msa0985550 | 0.829879 | 4.021100e-55 | -8.615850e-47 |
| Msa0614210 | Msa1015060 | 0.800865 | 1.179473e-48 | -8.615850e-47 |
| Msa0614210 | Msa1215210 | 0.837155 | 6.142269e-57 | -8.615850e-47 |
| Msa0614210 | Msa1221900 | 0.822475 | 2.322987e-53 | -8.615850e-47 |
| Msa0614210 | Msa1237030 | 0.804558 | 2.039494e-49 | -8.615850e-47 |
| Msa0614210 | Msa1238410 | 0.806144 | 9.485953e-50 | -8.615850e-47 |
| Msa0614210 | Msa1337730 | 0.808576 | 2.893411e-50 | -8.615850e-47 |
| Msa0614210 | Msa1382310 | 0.816253 | 6.083577e-52 | -8.615850e-47 |
| Msa0614210 | Msa1438450 | 0.828704 | 7.751406e-55 | -8.615850e-47 |
| Msa0132560 | Msa0614210 | 0.804471 | 2.126656e-49 | -8.615850e-47 |
| Msa0141830 | Msa0614210 | 0.811245 | 7.709171e-51 | -8.615850e-47 |
| Msa0143080 | Msa0614210 | 0.800932 | 1.142547e-48 | -8.615850e-47 |
| Msa0236980 | Msa0614210 | 0.806193 | 9.263606e-50 | -8.615850e-47 |
| Msa0388720 | Msa0614210 | 0.800794 | 1.219236e-48 | -8.615850e-47 |
| Msa0413200 | Msa0614210 | 0.803542 | 3.317293e-49 | -8.615850e-47 |
| Msa0259330 | Msa0614210 | 0.821515 | 3.875712e-53 | -8.615850e-47 |
| Msa0328210 | Msa0614210 | 0.816173 | 6.338389e-52 | -8.615850e-47 |
| Msa0560180 | Msa0614210 | 0.900062 | 1.066246e-77 | -8.615850e-47 |
| Msa0581460 | Msa0614210 | 0.816963 | 4.216876e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0614210 | MtrunA17_Chr4g0050151 | 93.715 | 541 | 11 | 2 | 1 | 524 | 1 | 535 | 0.0 | 1020 |
| Msa0614210 | MtrunA17_Chr2g0279401 | 71.322 | 537 | 109 | 5 | 16 | 523 | 20 | 540 | 0.0 | 766 |
| Msa0614210 | MtrunA17_Chr2g0327771 | 59.956 | 457 | 144 | 5 | 70 | 501 | 62 | 504 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0614210 | AT5G64300.1 | 74.950 | 499 | 90 | 5 | 42 | 505 | 32 | 530 | 0.0 | 749 |
| Msa0614210 | AT2G22450.1 | 68.571 | 420 | 105 | 5 | 78 | 479 | 64 | 474 | 0.0 | 576 |
| Msa0614210 | AT5G59750.1 | 57.872 | 470 | 176 | 3 | 53 | 500 | 30 | 499 | 0.0 | 550 |
| Msa0614210 | AT5G59750.2 | 53.968 | 504 | 176 | 4 | 53 | 500 | 30 | 533 | 0.0 | 533 |
| Msa0614210 | AT5G59750.3 | 56.068 | 412 | 159 | 3 | 53 | 442 | 30 | 441 | 1.65e-157 | 456 |
Find 185 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTTTGGGGAATAGGATTT+AGG | 0.160264 | 4_2:+63145423 | None:intergenic |
| GGAAACCAAACGTGTGAAAA+TGG | 0.179642 | 4_2:-63140367 | Msa0614210:CDS |
| ACCTGTGGTGGTACCATATT+TGG | 0.201373 | 4_2:+63143572 | None:intergenic |
| GGTTATGGTTTGTCCATTTC+AGG | 0.231937 | 4_2:-63140438 | Msa0614210:CDS |
| AGAGAAGAAGCCATTTAGTT+TGG | 0.270647 | 4_2:+63145408 | None:intergenic |
| ACATAATTTGTGTATCTTAC+AGG | 0.271505 | 4_2:+63140247 | None:intergenic |
| TTATTTATTTATTGAGAGTT+TGG | 0.288189 | 4_2:+63145463 | None:intergenic |
| GTTGATCTTGCAGTACTTGC+TGG | 0.298152 | 4_2:-63143402 | Msa0614210:CDS |
| AGTTTGGGGAATAGGATTTA+GGG | 0.303586 | 4_2:+63145424 | None:intergenic |
| ATCCTATTCCCCAAACTAAA+TGG | 0.305424 | 4_2:-63145418 | Msa0614210:exon |
| GAGAAGAAGCCATTTAGTTT+GGG | 0.305528 | 4_2:+63145409 | None:intergenic |
| GTACCTTGTATAAGTGATTA+AGG | 0.322113 | 4_2:-63139889 | Msa0614210:three_prime_UTR |
| TGTCTCACAGGAGACATATT+TGG | 0.327946 | 4_2:-63140952 | Msa0614210:CDS |
| GAGATTAGAGCTTCCTTTGA+TGG | 0.335212 | 4_2:-63144047 | Msa0614210:CDS |
| AGCCATTTAGTTTGGGGAAT+AGG | 0.335852 | 4_2:+63145416 | None:intergenic |
| CATTCACAGCTAACTGTTAT+AGG | 0.336467 | 4_2:-63142270 | Msa0614210:CDS |
| GGATAGGGCAACCACAGTTT+TGG | 0.339372 | 4_2:-63143538 | Msa0614210:CDS |
| CAATGGGATCCTACCTGAAA+TGG | 0.346472 | 4_2:+63140425 | None:intergenic |
| AAAATTTCAAATTGCTCAAT+GGG | 0.352317 | 4_2:-63144636 | Msa0614210:CDS |
| ACTGGAATCATCAATATTAC+TGG | 0.361001 | 4_2:+63140299 | None:intergenic |
| CGTTCTGTGTTGTGTTGGAT+TGG | 0.373220 | 4_2:+63145495 | None:intergenic |
| TCTTGCAGTACTTGCTGGTT+TGG | 0.375590 | 4_2:-63143397 | Msa0614210:CDS |
| TATGTTGGGCTCAAAGGTTA+TGG | 0.393304 | 4_2:-63140453 | Msa0614210:CDS |
| GATTTAGGGTTTGAATGAAA+TGG | 0.395767 | 4_2:+63145438 | None:intergenic |
| CCTGTTGACTCAAGGGAGTA+TGG | 0.400777 | 4_2:-63140739 | Msa0614210:CDS |
| GGACATGAAGGAAGGGGTAT+TGG | 0.405006 | 4_2:-63140841 | Msa0614210:CDS |
| TTATTTAACAGGGTGACATT+GGG | 0.414280 | 4_2:-63141011 | Msa0614210:intron |
| AAATTGCTCAATGGGTTTAA+CGG | 0.418543 | 4_2:-63144628 | Msa0614210:CDS |
| ATTGGTCTGGCAGGTATAGA+AGG | 0.425872 | 4_2:-63142351 | Msa0614210:intron |
| GCTCAGATTTGGCATTTGTT+CGG | 0.426151 | 4_2:-63144576 | Msa0614210:CDS |
| TCCTTTGATGGTCAACAGTC+GGG | 0.426635 | 4_2:-63144035 | Msa0614210:CDS |
| GTTAAAGCTGCGTTGACCTC+TGG | 0.428144 | 4_2:-63144511 | Msa0614210:CDS |
| TTTATTGTGAAGCACGGAAC+TGG | 0.428836 | 4_2:-63144106 | Msa0614210:CDS |
| AATAAATCACAAGTAGAATC+AGG | 0.432760 | 4_2:+63140151 | None:intergenic |
| TCATGTGCGTGGCTCAGATT+TGG | 0.436104 | 4_2:-63144587 | Msa0614210:CDS |
| TGCGGTAGCGCTTGGAACAC+TGG | 0.436511 | 4_2:-63144434 | Msa0614210:CDS |
| GAAGGAAGGGGTATTGGATT+GGG | 0.436773 | 4_2:-63140835 | Msa0614210:CDS |
| CCTGGGCGGTTGAAATCACT+TGG | 0.436809 | 4_2:+63143492 | None:intergenic |
| CTTATTTAACAGGGTGACAT+TGG | 0.437054 | 4_2:-63141012 | Msa0614210:intron |
| TTATGTGCCAGGAGCAGTAC+TGG | 0.441984 | 4_2:+63140281 | None:intergenic |
| TCTAATAATGGCAGCACAGT+TGG | 0.442929 | 4_2:-63144149 | Msa0614210:CDS |
| TGAAGGAAGGGGTATTGGAT+TGG | 0.444630 | 4_2:-63140836 | Msa0614210:CDS |
| TTATTTATTGAGAGTTTGGT+TGG | 0.452281 | 4_2:+63145467 | None:intergenic |
| CAGGTGTGTCGGCTCAGGAT+AGG | 0.455862 | 4_2:-63143554 | Msa0614210:CDS |
| ATTATCTATTACACATTACA+TGG | 0.458016 | 4_2:+63140058 | None:intergenic |
| CCATACTCCCTTGAGTCAAC+AGG | 0.462092 | 4_2:+63140739 | None:intergenic |
| GCGGTAGCGCTTGGAACACT+GGG | 0.465356 | 4_2:-63144433 | Msa0614210:CDS |
| CACTTATCACAAATGAAAAC+AGG | 0.465466 | 4_2:-63140398 | Msa0614210:CDS |
| GAATTTAACAGCAAATTGAA+TGG | 0.466315 | 4_2:-63140327 | Msa0614210:CDS |
| CAACTTAATGCGGTAGCGCT+TGG | 0.467840 | 4_2:-63144442 | Msa0614210:CDS |
| ATAGAATAGGTGAGGGGCTG+AGG | 0.468263 | 4_2:-63140037 | Msa0614210:three_prime_UTR |
| TGCTGCGTTCTGTGTTGTGT+TGG | 0.469256 | 4_2:+63145490 | None:intergenic |
| GGGGCAGATACAGCTCTAAC+AGG | 0.470368 | 4_2:-63144412 | Msa0614210:CDS |
| AGGCAATCCCAACTCCTCAT+TGG | 0.470707 | 4_2:+63140759 | None:intergenic |
| GCAAAATATGTTGGGCTCAA+AGG | 0.471659 | 4_2:-63140459 | Msa0614210:CDS |
| AAACGAAGGAGATCTAATAA+TGG | 0.473118 | 4_2:-63144161 | Msa0614210:CDS |
| AACAATCCGGCAAAATATGT+TGG | 0.476857 | 4_2:-63140468 | Msa0614210:CDS |
| AATTGTAATTGCAGATATTG+AGG | 0.477500 | 4_2:-63140524 | Msa0614210:intron |
| TCTGCAAACTGGCGAAGCTT+AGG | 0.478958 | 4_2:+63143318 | None:intergenic |
| AGGTGTGTCGGCTCAGGATA+GGG | 0.482470 | 4_2:-63143553 | Msa0614210:CDS |
| CTGAGGCTATTGAAGACATT+CGG | 0.487102 | 4_2:-63144321 | Msa0614210:CDS |
| GTGTGACTGCGGAAATCAAT+TGG | 0.489196 | 4_2:-63140920 | Msa0614210:CDS |
| AAATGAAAACAGGAGATACT+TGG | 0.489544 | 4_2:-63140388 | Msa0614210:CDS |
| GAAACCAAACGTGTGAAAAT+GGG | 0.490915 | 4_2:-63140366 | Msa0614210:CDS |
| CAGATTGAGGCTGCTGGCAG+AGG | 0.491152 | 4_2:-63140883 | Msa0614210:CDS |
| TGTAGAAGCCAATGAGGAGT+TGG | 0.491158 | 4_2:-63140767 | Msa0614210:CDS |
| TGCTTATAACCTACAGGATG+AGG | 0.491407 | 4_2:-63140800 | Msa0614210:CDS |
| TGTGTAATAGATAATAGAAT+AGG | 0.492532 | 4_2:-63140050 | Msa0614210:three_prime_UTR |
| AAGGAAGCTCTAATCTCTCC+AGG | 0.494013 | 4_2:+63144053 | None:intergenic |
| TTGTGATAAGTGATAACAAT+GGG | 0.494880 | 4_2:+63140409 | None:intergenic |
| CACCACAGGTGTGTCGGCTC+AGG | 0.495943 | 4_2:-63143559 | Msa0614210:CDS |
| GTTGGCAACACCTGAGGCTA+TGG | 0.497594 | 4_2:-63144131 | Msa0614210:CDS |
| GTGAAAATGGGTCACATGTA+TGG | 0.498935 | 4_2:-63140354 | Msa0614210:CDS |
| GCCAAATATGGTACCACCAC+AGG | 0.505213 | 4_2:-63143573 | Msa0614210:CDS |
| ACAATCCGGCAAAATATGTT+GGG | 0.506282 | 4_2:-63140467 | Msa0614210:CDS |
| CACCCTCTCTCTCGCGTCCA+CGG | 0.507943 | 4_2:-63145374 | Msa0614210:intron |
| GACTCAAGGGAGTATGGAAT+TGG | 0.510546 | 4_2:-63140733 | Msa0614210:CDS |
| ATTGTAATTGCAGATATTGA+GGG | 0.510691 | 4_2:-63140523 | Msa0614210:intron |
| TGGGATTGCCTGTTGACTCA+AGG | 0.511648 | 4_2:-63140747 | Msa0614210:CDS |
| GATTCAGACAGTCCAACAAA+AGG | 0.513016 | 4_2:-63144358 | Msa0614210:CDS |
| TTTAGCGGGAAAATATGGCC+TGG | 0.513539 | 4_2:+63143474 | None:intergenic |
| TAAAGGTGCTCTTTGTTGAA+AGG | 0.514646 | 4_2:-63139850 | Msa0614210:three_prime_UTR |
| TTAGCGGGAAAATATGGCCT+GGG | 0.516577 | 4_2:+63143475 | None:intergenic |
| TTCCTTTGATGGTCAACAGT+CGG | 0.517538 | 4_2:-63144036 | Msa0614210:CDS |
| GGTGGTATCTTGAAGAGAGC+TGG | 0.518284 | 4_2:-63143441 | Msa0614210:CDS |
| ATTGCAGATATTGAGGGACT+TGG | 0.519933 | 4_2:-63140517 | Msa0614210:intron |
| CTTTGTTGAAAGGTATCTCG+TGG | 0.520045 | 4_2:-63139840 | Msa0614210:three_prime_UTR |
| GTCTTCAATAGCCTCAGGTA+TGG | 0.520814 | 4_2:+63144327 | None:intergenic |
| GGGATTGCCTGTTGACTCAA+GGG | 0.524496 | 4_2:-63140746 | Msa0614210:CDS |
| CTATAACAGTTAGCTGTGAA+TGG | 0.526297 | 4_2:+63142271 | None:intergenic |
| TCTTGCAATGCAACAGATTG+AGG | 0.526543 | 4_2:-63140896 | Msa0614210:CDS |
| GTAGAAGCCAATGAGGAGTT+GGG | 0.529410 | 4_2:-63140766 | Msa0614210:CDS |
| TCCCGACTGTTGACCATCAA+AGG | 0.529835 | 4_2:+63144034 | None:intergenic |
| TGTTGGATTGGATGAGAAGA+AGG | 0.531310 | 4_2:+63145507 | None:intergenic |
| TTGATTTCCGCAGTCACACC+TGG | 0.532360 | 4_2:+63140924 | None:intergenic |
| AATTTCTATACTGCTTCAGA+TGG | 0.533048 | 4_2:-63140194 | Msa0614210:three_prime_UTR |
| TGGACGCGAGAGAGAGGGTG+TGG | 0.542232 | 4_2:+63145377 | None:intergenic |
| GGCTGCTGGCAGAGGTGTGT+TGG | 0.543552 | 4_2:-63140875 | Msa0614210:CDS |
| GGAGCATATTGCGATGGTAA+AGG | 0.544393 | 4_2:-63142230 | Msa0614210:intron |
| AAGCATGAAAGAGGAAGACC+TGG | 0.546167 | 4_2:-63144071 | Msa0614210:CDS |
| CGAATGTCTTCAATAGCCTC+AGG | 0.546934 | 4_2:+63144322 | None:intergenic |
| GAAGCTAATGACAAACAATC+CGG | 0.547961 | 4_2:-63140481 | Msa0614210:CDS |
| GCTTCGTGCTTATAACCTAC+AGG | 0.549079 | 4_2:-63140806 | Msa0614210:CDS |
| TGCACTAATACCAACAATGT+GGG | 0.551549 | 4_2:-63142296 | Msa0614210:CDS |
| GATGATTCCAGTACTGCTCC+TGG | 0.554163 | 4_2:-63140288 | Msa0614210:CDS |
| TAGTTTCATTATACAAGAGT+GGG | 0.558904 | 4_2:-63139925 | Msa0614210:three_prime_UTR |
| ATGGTTTGTCCATTTCAGGT+AGG | 0.561182 | 4_2:-63140434 | Msa0614210:CDS |
| ACAATAAAAGCCATAGCCTC+AGG | 0.561239 | 4_2:+63144121 | None:intergenic |
| TCTTCGAGGACATGAAGGAA+GGG | 0.561452 | 4_2:-63140848 | Msa0614210:CDS |
| ATGGATGTGATGTTCTTGTG+AGG | 0.562152 | 4_2:-63140987 | Msa0614210:CDS |
| ATTAGTACTTCAGATGGTAG+TGG | 0.563625 | 4_2:-63144206 | Msa0614210:intron |
| ATGCAACAGATTGAGGCTGC+TGG | 0.565430 | 4_2:-63140889 | Msa0614210:CDS |
| GAGACATATTTGGATCTGCC+AGG | 0.566429 | 4_2:-63140942 | Msa0614210:CDS |
| CCAAGTGATTTCAACCGCCC+AGG | 0.570750 | 4_2:-63143492 | Msa0614210:CDS |
| GGAGTATGGAATTGGTGCAC+AGG | 0.571226 | 4_2:-63140725 | Msa0614210:intron |
| TAACAGGGTGACATTGGGGA+TGG | 0.572072 | 4_2:-63141006 | Msa0614210:intron |
| TTGCAGATATTGAGGGACTT+GGG | 0.572398 | 4_2:-63140516 | Msa0614210:intron |
| GCACTAATACCAACAATGTG+GGG | 0.575469 | 4_2:-63142295 | Msa0614210:CDS |
| AGTTTGTATAAGCATGAAAG+AGG | 0.575891 | 4_2:-63144080 | Msa0614210:CDS |
| GGTTATAAGCACGAAGCTTG+TGG | 0.577439 | 4_2:+63140812 | None:intergenic |
| ATCTTCGAGGACATGAAGGA+AGG | 0.578424 | 4_2:-63140849 | Msa0614210:CDS |
| GCTGCGTTGACCTCTGGAGG+AGG | 0.578530 | 4_2:-63144505 | Msa0614210:CDS |
| CATACCGCATTGCGACATGA+AGG | 0.581456 | 4_2:+63144538 | None:intergenic |
| ACCTCACACAGAACTGCCAC+AGG | 0.581651 | 4_2:+63143372 | None:intergenic |
| ATAGTTTCATTATACAAGAG+TGG | 0.582378 | 4_2:-63139926 | Msa0614210:three_prime_UTR |
| TAGAATAGGTGAGGGGCTGA+GGG | 0.582487 | 4_2:-63140036 | Msa0614210:three_prime_UTR |
| AGAAGAAGCCATTTAGTTTG+GGG | 0.582512 | 4_2:+63145410 | None:intergenic |
| TACAGCATTCACTGTGACAG+TGG | 0.582981 | 4_2:-63143993 | Msa0614210:intron |
| TGACCGTGGACGCGAGAGAG+AGG | 0.584520 | 4_2:+63145371 | None:intergenic |
| AATGGGTCACATGTATGGCT+TGG | 0.585495 | 4_2:-63140349 | Msa0614210:CDS |
| TGTGAGGTTGTAGATGATGA+TGG | 0.585772 | 4_2:-63143357 | Msa0614210:CDS |
| CTTCGAGGACATGAAGGAAG+GGG | 0.588755 | 4_2:-63140847 | Msa0614210:CDS |
| AAAGCTGCGTTGACCTCTGG+AGG | 0.591046 | 4_2:-63144508 | Msa0614210:CDS |
| CTGTCACAGTGAATGCTGTA+CGG | 0.591136 | 4_2:+63143996 | None:intergenic |
| ACTTGCTGGTTTGGATCCTG+TGG | 0.591421 | 4_2:-63143388 | Msa0614210:CDS |
| ATAGATAATAGAATAGGTGA+GGG | 0.591575 | 4_2:-63140044 | Msa0614210:three_prime_UTR |
| TAACCTACAGGATGAGGGAA+GGG | 0.594297 | 4_2:-63140794 | Msa0614210:CDS |
| GATACAGCTCTAACAGGCAG+TGG | 0.594402 | 4_2:-63144406 | Msa0614210:CDS |
| GGTGTGTTGGTATATCTTCG+AGG | 0.595300 | 4_2:-63140862 | Msa0614210:CDS |
| GATAAACTAGTGGAACGTGC+TGG | 0.595479 | 4_2:-63142322 | Msa0614210:CDS |
| AAGGAAGAGAGATAAACTAG+TGG | 0.595527 | 4_2:-63142332 | Msa0614210:CDS |
| GCTATTGAAGACATTCGGAA+TGG | 0.596453 | 4_2:-63144316 | Msa0614210:CDS |
| TCGCACAAAACAGAAGAGGA+AGG | 0.598136 | 4_2:-63140225 | Msa0614210:three_prime_UTR |
| GACCGTGGACGCGAGAGAGA+GGG | 0.599560 | 4_2:+63145372 | None:intergenic |
| TGAAGACATTCGGAATGGAA+AGG | 0.600427 | 4_2:-63144311 | Msa0614210:intron |
| AATAGATAATAGAATAGGTG+AGG | 0.601516 | 4_2:-63140045 | Msa0614210:three_prime_UTR |
| GCTTATAACCTACAGGATGA+GGG | 0.601860 | 4_2:-63140799 | Msa0614210:CDS |
| CGCACAAAACAGAAGAGGAA+GGG | 0.606609 | 4_2:-63140224 | Msa0614210:three_prime_UTR |
| TATTTAACAGGGTGACATTG+GGG | 0.607649 | 4_2:-63141010 | Msa0614210:intron |
| TATCCCTTCCCTCATCCTGT+AGG | 0.610379 | 4_2:+63140791 | None:intergenic |
| TATGTCGCACAAAACAGAAG+AGG | 0.610417 | 4_2:-63140229 | Msa0614210:three_prime_UTR |
| GTACACTCAGAGTGTCTCAC+AGG | 0.612117 | 4_2:-63140964 | Msa0614210:CDS |
| ATCCTGAGCCGACACACCTG+TGG | 0.612282 | 4_2:+63143557 | None:intergenic |
| GTATATCTTCGAGGACATGA+AGG | 0.613709 | 4_2:-63140853 | Msa0614210:CDS |
| ATACCGCATTGCGACATGAA+GGG | 0.616657 | 4_2:+63144539 | None:intergenic |
| TCCTGTGGCAGTTCTGTGTG+AGG | 0.618636 | 4_2:-63143373 | Msa0614210:CDS |
| CTGCACTAATACCAACAATG+TGG | 0.619531 | 4_2:-63142297 | Msa0614210:CDS |
| TGGATTGGATGAGAAGAAGG+TGG | 0.621203 | 4_2:+63145510 | None:intergenic |
| AAGCTTAGGTAATCTAGCCA+TGG | 0.622161 | 4_2:+63143332 | None:intergenic |
| ATAACCTACAGGATGAGGGA+AGG | 0.623311 | 4_2:-63140795 | Msa0614210:CDS |
| TGGATGTGATGTTCTTGTGA+GGG | 0.626484 | 4_2:-63140986 | Msa0614210:CDS |
| TTCCCGCTAAAATACAGGGA+AGG | 0.631313 | 4_2:-63143462 | Msa0614210:CDS |
| TGGTACCACCACAGGTGTGT+CGG | 0.632234 | 4_2:-63143565 | Msa0614210:CDS |
| TGTAGATGATGATGGTTCCA+TGG | 0.633135 | 4_2:-63143349 | Msa0614210:CDS |
| CCGCTAAAATACAGGGAAGG+TGG | 0.634097 | 4_2:-63143459 | Msa0614210:CDS |
| CCGTCTATGATTCATGTGCG+TGG | 0.635896 | 4_2:-63144598 | Msa0614210:CDS |
| CTGAGCCGACACACCTGTGG+TGG | 0.636032 | 4_2:+63143560 | None:intergenic |
| GGTGGAATGCTCAAAGATGT+TGG | 0.637271 | 4_2:+63145528 | None:intergenic |
| GCACCTTAATCACTTATACA+AGG | 0.639090 | 4_2:+63139886 | None:intergenic |
| AGCACAGTTGGCAACACCTG+AGG | 0.640668 | 4_2:-63144137 | Msa0614210:CDS |
| CACTAATACCAACAATGTGG+GGG | 0.642333 | 4_2:-63142294 | Msa0614210:CDS |
| TGGGATGGAGCATATTGCGA+TGG | 0.648423 | 4_2:-63142236 | Msa0614210:CDS |
| CCACGCACATGAATCATAGA+CGG | 0.649929 | 4_2:+63144598 | None:intergenic |
| GACGAGGACAGAGAAAACGA+AGG | 0.678938 | 4_2:-63144175 | Msa0614210:CDS |
| GGATACTGTAGAAGCCAATG+AGG | 0.679133 | 4_2:-63140773 | Msa0614210:CDS |
| TGAATCAGCACAACTTAATG+CGG | 0.679998 | 4_2:-63144452 | Msa0614210:CDS |
| GCGGGAAAATATGGCCTGGG+CGG | 0.682425 | 4_2:+63143478 | None:intergenic |
| GGTAGTGGTTGTAGATGACG+AGG | 0.685375 | 4_2:-63144191 | Msa0614210:CDS |
| TTTGTGATAAGTGATAACAA+TGG | 0.686821 | 4_2:+63140408 | None:intergenic |
| GGATGCAAGGGCCAAAACTG+TGG | 0.696804 | 4_2:+63143527 | None:intergenic |
| TAGATAATAGAATAGGTGAG+GGG | 0.707032 | 4_2:-63140043 | Msa0614210:three_prime_UTR |
| CGGTAGCGCTTGGAACACTG+GGG | 0.714496 | 4_2:-63144432 | Msa0614210:CDS |
| GGATCTGCCAGGTGTGACTG+CGG | 0.722494 | 4_2:-63140931 | Msa0614210:CDS |
| ATTCCCTTCATGTCGCAATG+CGG | 0.734754 | 4_2:-63144542 | Msa0614210:CDS |
| GGTAGCGCTTGGAACACTGG+GGG | 0.737992 | 4_2:-63144431 | Msa0614210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATCTTAATTTTTAGTTA+TGG | - | chr4_2:63140153-63140172 | Msa0614210:three_prime_UTR | 10.0% |
| !!! | ATAATAATTTCTTATTTTTG+TGG | - | chr4_2:63140647-63140666 | Msa0614210:intron | 10.0% |
| !!! | TAATAATTTCTTATTTTTGT+GGG | - | chr4_2:63140648-63140667 | Msa0614210:intron | 10.0% |
| !! | TTTAATAAAATATAACTTTG+TGG | - | chr4_2:63141725-63141744 | Msa0614210:intron | 10.0% |
| !! | TATATATTGAACTATATATA+TGG | - | chr4_2:63143182-63143201 | Msa0614210:intron | 10.0% |
| !! | AAAAAAAACTAAAGAAATTA+TGG | + | chr4_2:63143492-63143511 | None:intergenic | 10.0% |
| !! | TTATTTATTTATTGAGAGTT+TGG | + | chr4_2:63139915-63139934 | None:intergenic | 15.0% |
| !! | ATTAAAGCAGTTAAAAAATT+GGG | + | chr4_2:63140100-63140119 | None:intergenic | 15.0% |
| !! | AATTAAAGCAGTTAAAAAAT+TGG | + | chr4_2:63140101-63140120 | None:intergenic | 15.0% |
| !! | AACTAAAAATTAAGATAATC+TGG | + | chr4_2:63140152-63140171 | None:intergenic | 15.0% |
| !!! | TTTTATTATTTAACCCTAAT+GGG | + | chr4_2:63142240-63142259 | None:intergenic | 15.0% |
| !!! | TTTTTATTATTTAACCCTAA+TGG | + | chr4_2:63142241-63142260 | None:intergenic | 15.0% |
| !!! | TTCTCTTTATTTGTATATAA+AGG | - | chr4_2:63142287-63142306 | Msa0614210:CDS | 15.0% |
| !!! | TCTCTTTATTTGTATATAAA+GGG | - | chr4_2:63142288-63142307 | Msa0614210:CDS | 15.0% |
| !!! | ATTCATTTTGAAAAAATTCA+GGG | + | chr4_2:63143912-63143931 | None:intergenic | 15.0% |
| !!! | TATTCATTTTGAAAAAATTC+AGG | + | chr4_2:63143913-63143932 | None:intergenic | 15.0% |
| !!! | ATCTTAATTTTTAGTTATGG+TGG | - | chr4_2:63140156-63140175 | Msa0614210:three_prime_UTR | 20.0% |
| !! | AAAAATTTCAAATTGCTCAA+TGG | - | chr4_2:63140738-63140757 | Msa0614210:CDS | 20.0% |
| !! | AAAATTTCAAATTGCTCAAT+GGG | - | chr4_2:63140739-63140758 | Msa0614210:CDS | 20.0% |
| !!! | GGTATTCTATATAAAAGTTT+TGG | - | chr4_2:63141108-63141127 | Msa0614210:intron | 20.0% |
| !! | TAAATAATAAAAAGCTCATG+AGG | - | chr4_2:63142248-63142267 | Msa0614210:CDS | 20.0% |
| !! | AAATAATAAAAAGCTCATGA+GGG | - | chr4_2:63142249-63142268 | Msa0614210:CDS | 20.0% |
| !!! | AATTTTTGAAAGACAAATCA+CGG | + | chr4_2:63142631-63142650 | None:intergenic | 20.0% |
| !! | AACTAGAAATTCAATCAATT+TGG | - | chr4_2:63142661-63142680 | Msa0614210:intron | 20.0% |
| !!! | TAGGATTTCAATTTTTGTAA+TGG | + | chr4_2:63142805-63142824 | None:intergenic | 20.0% |
| !! | TAATGGAAGATAAACAAAAT+AGG | + | chr4_2:63142824-63142843 | None:intergenic | 20.0% |
| !!! | TAACCTTGATTTTAACTAAA+TGG | - | chr4_2:63143236-63143255 | Msa0614210:intron | 20.0% |
| !! | AAAATGAATAGAGAAGAAAA+AGG | - | chr4_2:63143923-63143942 | Msa0614210:intron | 20.0% |
| !! | ATGCAAAAATGTTGAAAAAA+GGG | + | chr4_2:63144209-63144228 | None:intergenic | 20.0% |
| !! | AATGCAAAAATGTTGAAAAA+AGG | + | chr4_2:63144210-63144229 | None:intergenic | 20.0% |
| !!! | ATTTTACTGTATTCAATTCA+TGG | - | chr4_2:63144727-63144746 | Msa0614210:intron | 20.0% |
| !! | ATTATCTATTACACATTACA+TGG | + | chr4_2:63145320-63145339 | None:intergenic | 20.0% |
| !! | TGTGTAATAGATAATAGAAT+AGG | - | chr4_2:63145325-63145344 | Msa0614210:intron | 20.0% |
| ! | TTATTTATTGAGAGTTTGGT+TGG | + | chr4_2:63139911-63139930 | None:intergenic | 25.0% |
| ! | AACAAAACAGATAAGATAAG+AGG | + | chr4_2:63140321-63140340 | None:intergenic | 25.0% |
| ! | CATCTCCATAAAAGAAAATT+GGG | + | chr4_2:63140410-63140429 | None:intergenic | 25.0% |
| !! | CAATTTTCTTTTATGGAGAT+GGG | - | chr4_2:63140409-63140428 | Msa0614210:CDS | 25.0% |
| !! | ATTTTTGTGGGAATTATGTT+TGG | - | chr4_2:63140660-63140679 | Msa0614210:intron | 25.0% |
| ! | TGTCTCTTTCTATTCAATAT+AGG | - | chr4_2:63140709-63140728 | Msa0614210:intron | 25.0% |
| ! | GTCTCTTTCTATTCAATATA+GGG | - | chr4_2:63140710-63140729 | Msa0614210:intron | 25.0% |
| ! | GTACTAATGTCAGTTAATAA+CGG | + | chr4_2:63141157-63141176 | None:intergenic | 25.0% |
| !!! | TGTTTTAGATGATGTAAGAA+TGG | + | chr4_2:63141476-63141495 | None:intergenic | 25.0% |
| !! | ACTTATCAATGCAATTTTGT+AGG | - | chr4_2:63141777-63141796 | Msa0614210:intron | 25.0% |
| !!! | TATCTATTGCTGACTTAATA+AGG | - | chr4_2:63142100-63142119 | Msa0614210:intron | 25.0% |
| ! | GATGACAATTAAGGAAAATA+GGG | + | chr4_2:63142460-63142479 | None:intergenic | 25.0% |
| ! | AGATGACAATTAAGGAAAAT+AGG | + | chr4_2:63142461-63142480 | None:intergenic | 25.0% |
| ! | GAAGAAATAGATGACAATTA+AGG | + | chr4_2:63142469-63142488 | None:intergenic | 25.0% |
| ! | ACAACAAAAATTGCATACAA+TGG | + | chr4_2:63142542-63142561 | None:intergenic | 25.0% |
| !!! | TTGTATGCAATTTTTGTTGT+CGG | - | chr4_2:63142542-63142561 | Msa0614210:intron | 25.0% |
| !!! | TCAATCAATTTGGTTTTTTG+TGG | - | chr4_2:63142671-63142690 | Msa0614210:intron | 25.0% |
| ! | AAAAATTTAACTGCGCTTAA+AGG | + | chr4_2:63142882-63142901 | None:intergenic | 25.0% |
| ! | AAATTAGCTAAAGATGAATC+AGG | + | chr4_2:63142947-63142966 | None:intergenic | 25.0% |
| ! | AAAAGAAACAAAAAGAATCC+AGG | + | chr4_2:63142975-63142994 | None:intergenic | 25.0% |
| !!! | GATTCTTTTTGTTTCTTTTC+TGG | - | chr4_2:63142976-63142995 | Msa0614210:intron | 25.0% |
| ! | CATCCATTTAGTTAAAATCA+AGG | + | chr4_2:63143242-63143261 | None:intergenic | 25.0% |
| ! | ATTTATTTATTTGACAGCCA+CGG | + | chr4_2:63143430-63143449 | None:intergenic | 25.0% |
| ! | TCATCAAACAAGTTATGTAT+TGG | + | chr4_2:63143606-63143625 | None:intergenic | 25.0% |
| !! | GTAAGTAGTTCGATATTTTA+AGG | + | chr4_2:63143700-63143719 | None:intergenic | 25.0% |
| !!! | AGAATTTCAAGTTAACTCAT+GGG | + | chr4_2:63143791-63143810 | None:intergenic | 25.0% |
| !! | AATTCTCATTGACTGAAATT+GGG | - | chr4_2:63144101-63144120 | Msa0614210:CDS | 25.0% |
| ! | TGCAAAAATGTTGAAAAAAG+GGG | + | chr4_2:63144208-63144227 | None:intergenic | 25.0% |
| !! | TTTCAACATTTTTGCATTCA+AGG | - | chr4_2:63144212-63144231 | Msa0614210:intron | 25.0% |
| ! | ATTGAAAGGTTCAAGATAAT+TGG | + | chr4_2:63144281-63144300 | None:intergenic | 25.0% |
| !! | TTGGACATTTCTTATTTAAC+AGG | - | chr4_2:63144353-63144372 | Msa0614210:CDS | 25.0% |
| !! | TGGACATTTCTTATTTAACA+GGG | - | chr4_2:63144354-63144373 | Msa0614210:CDS | 25.0% |
| ! | TACATGATTATTAAGTTCAC+TGG | - | chr4_2:63144755-63144774 | Msa0614210:intron | 25.0% |
| !! | AACATAGAACTAGATGTTTT+AGG | - | chr4_2:63144795-63144814 | Msa0614210:intron | 25.0% |
| ! | AATTGTAATTGCAGATATTG+AGG | - | chr4_2:63144851-63144870 | Msa0614210:intron | 25.0% |
| ! | ATTGTAATTGCAGATATTGA+GGG | - | chr4_2:63144852-63144871 | Msa0614210:intron | 25.0% |
| ! | TTGTGATAAGTGATAACAAT+GGG | + | chr4_2:63144969-63144988 | None:intergenic | 25.0% |
| ! | TTTGTGATAAGTGATAACAA+TGG | + | chr4_2:63144970-63144989 | None:intergenic | 25.0% |
| ! | GAATTTAACAGCAAATTGAA+TGG | - | chr4_2:63145048-63145067 | Msa0614210:intron | 25.0% |
| !! | ACATAATTTGTGTATCTTAC+AGG | + | chr4_2:63145131-63145150 | None:intergenic | 25.0% |
| ! | AATAAATCACAAGTAGAATC+AGG | + | chr4_2:63145227-63145246 | None:intergenic | 25.0% |
| ! | AATAGATAATAGAATAGGTG+AGG | - | chr4_2:63145330-63145349 | Msa0614210:intron | 25.0% |
| ! | ATAGATAATAGAATAGGTGA+GGG | - | chr4_2:63145331-63145350 | Msa0614210:intron | 25.0% |
| ! | ATAGTTTCATTATACAAGAG+TGG | - | chr4_2:63145449-63145468 | Msa0614210:five_prime_UTR | 25.0% |
| ! | TAGTTTCATTATACAAGAGT+GGG | - | chr4_2:63145450-63145469 | Msa0614210:five_prime_UTR | 25.0% |
| ! | GATTTAGGGTTTGAATGAAA+TGG | + | chr4_2:63139940-63139959 | None:intergenic | 30.0% |
| CAGAAGATAAATGGAAAAGA+AGG | + | chr4_2:63140049-63140068 | None:intergenic | 30.0% | |
| TGAAATAGAACCTAAGAAAG+CGG | + | chr4_2:63140075-63140094 | None:intergenic | 30.0% | |
| AAATTTCTATGCCACAACTT+TGG | - | chr4_2:63140294-63140313 | Msa0614210:CDS | 30.0% | |
| CATAAAAGAAAATTGGGCTA+AGG | + | chr4_2:63140404-63140423 | None:intergenic | 30.0% | |
| ! | CTTAGCCCAATTTTCTTTTA+TGG | - | chr4_2:63140402-63140421 | Msa0614210:CDS | 30.0% |
| CCATCTCCATAAAAGAAAAT+TGG | + | chr4_2:63140411-63140430 | None:intergenic | 30.0% | |
| ! | CCAATTTTCTTTTATGGAGA+TGG | - | chr4_2:63140408-63140427 | Msa0614210:CDS | 30.0% |
| CAAAATTGAATGTAATGTGC+TGG | - | chr4_2:63140530-63140549 | Msa0614210:intron | 30.0% | |
| ! | AAATTGCTCAATGGGTTTAA+CGG | - | chr4_2:63140747-63140766 | Msa0614210:CDS | 30.0% |
| AGACCTAAAAAATGAAGATC+TGG | - | chr4_2:63140893-63140912 | Msa0614210:CDS | 30.0% | |
| !!! | CAACCAGATCTTCATTTTTT+AGG | + | chr4_2:63140899-63140918 | None:intergenic | 30.0% |
| CTAAAAAATGAAGATCTGGT+TGG | - | chr4_2:63140897-63140916 | Msa0614210:CDS | 30.0% | |
| ! | GTTAATAACGGAAATCTAAG+TGG | + | chr4_2:63141145-63141164 | None:intergenic | 30.0% |
| AAACGAAGGAGATCTAATAA+TGG | - | chr4_2:63141214-63141233 | Msa0614210:intron | 30.0% | |
| AGTTTGTATAAGCATGAAAG+AGG | - | chr4_2:63141295-63141314 | Msa0614210:intron | 30.0% | |
| GTAAATGTCTGTTACATACT+GGG | + | chr4_2:63141631-63141650 | None:intergenic | 30.0% | |
| AGTAAATGTCTGTTACATAC+TGG | + | chr4_2:63141632-63141651 | None:intergenic | 30.0% | |
| ! | ATTTTGTAGGATGCCAAATA+TGG | - | chr4_2:63141790-63141809 | Msa0614210:intron | 30.0% |
| ! | TTTTGAATCTTTGGATGCAA+GGG | + | chr4_2:63141863-63141882 | None:intergenic | 30.0% |
| !!! | ATCACTTGGTTTTGAATCTT+TGG | + | chr4_2:63141872-63141891 | None:intergenic | 30.0% |
| !!! | TGTATTTTAGCGGGAAAATA+TGG | + | chr4_2:63141909-63141928 | None:intergenic | 30.0% |
| ! | ATATTTTCCCGCTAAAATAC+AGG | - | chr4_2:63141908-63141927 | Msa0614210:intron | 30.0% |
| ! | TATTTTCCCGCTAAAATACA+GGG | - | chr4_2:63141909-63141928 | Msa0614210:intron | 30.0% |
| CTTAAAAACCCTCTCATATT+GGG | + | chr4_2:63142170-63142189 | None:intergenic | 30.0% | |
| ACTTAAAAACCCTCTCATAT+TGG | + | chr4_2:63142171-63142190 | None:intergenic | 30.0% | |
| !!! | AGGGTTTTTAAGTAGTTAGT+AGG | - | chr4_2:63142178-63142197 | Msa0614210:intron | 30.0% |
| !!! | GTTTTTAAGTAGTTAGTAGG+TGG | - | chr4_2:63142181-63142200 | Msa0614210:intron | 30.0% |
| GTAATGACAATAGTAGTAGA+GGG | + | chr4_2:63142424-63142443 | None:intergenic | 30.0% | |
| AGTAATGACAATAGTAGTAG+AGG | + | chr4_2:63142425-63142444 | None:intergenic | 30.0% | |
| !! | TGATAGCAACCTCTAAAATT+AGG | + | chr4_2:63142705-63142724 | None:intergenic | 30.0% |
| ACTTAACACATAAGCAATCA+TGG | + | chr4_2:63142736-63142755 | None:intergenic | 30.0% | |
| GCATATAAAGACAATAACCA+CGG | + | chr4_2:63142905-63142924 | None:intergenic | 30.0% | |
| ! | CTTTAGCTAATTTTTCTTCC+TGG | - | chr4_2:63142954-63142973 | Msa0614210:intron | 30.0% |
| !!! | TGTTATAGGTCACTTTTAGA+TGG | - | chr4_2:63143119-63143138 | Msa0614210:intron | 30.0% |
| !!! | GTTATAGGTCACTTTTAGAT+GGG | - | chr4_2:63143120-63143139 | Msa0614210:intron | 30.0% |
| GCATAAAAGAGATACCAATA+TGG | - | chr4_2:63143267-63143286 | Msa0614210:intron | 30.0% | |
| ATCATATTGCTCTACCATAT+TGG | + | chr4_2:63143284-63143303 | None:intergenic | 30.0% | |
| ATAAAAATTGAGTCACATCG+AGG | - | chr4_2:63143456-63143475 | Msa0614210:CDS | 30.0% | |
| TAGCTTCTATTCCAAATGTA+GGG | + | chr4_2:63143632-63143651 | None:intergenic | 30.0% | |
| TTAGCTTCTATTCCAAATGT+AGG | + | chr4_2:63143633-63143652 | None:intergenic | 30.0% | |
| TCCCAAAAAAAATCTCAGAT+AGG | - | chr4_2:63143750-63143769 | Msa0614210:intron | 30.0% | |
| !!! | CCCTATCTGAGATTTTTTTT+GGG | + | chr4_2:63143754-63143773 | None:intergenic | 30.0% |
| CCCAAAAAAAATCTCAGATA+GGG | - | chr4_2:63143751-63143770 | Msa0614210:intron | 30.0% | |
| !!! | TCCCTATCTGAGATTTTTTT+TGG | + | chr4_2:63143755-63143774 | None:intergenic | 30.0% |
| !! | CAGAATTTCAAGTTAACTCA+TGG | + | chr4_2:63143792-63143811 | None:intergenic | 30.0% |
| GATCTAGTCATCTTTCTATT+TGG | - | chr4_2:63144059-63144078 | Msa0614210:CDS | 30.0% | |
| TCAATGAGAATTCAATTCCT+GGG | + | chr4_2:63144093-63144112 | None:intergenic | 30.0% | |
| ! | GAATTCTCATTGACTGAAAT+TGG | - | chr4_2:63144100-63144119 | Msa0614210:CDS | 30.0% |
| AAACTGATCTTGTCAGTTAA+AGG | + | chr4_2:63144146-63144165 | None:intergenic | 30.0% | |
| TTATTTAACAGGGTGACATT+GGG | - | chr4_2:63144364-63144383 | Msa0614210:CDS | 30.0% | |
| !! | ACATCTAGTTCTATGTTGTA+TGG | + | chr4_2:63144792-63144811 | None:intergenic | 30.0% |
| CACTTATCACAAATGAAAAC+AGG | - | chr4_2:63144977-63144996 | Msa0614210:intron | 30.0% | |
| AAATGAAAACAGGAGATACT+TGG | - | chr4_2:63144987-63145006 | Msa0614210:intron | 30.0% | |
| ACTGGAATCATCAATATTAC+TGG | + | chr4_2:63145079-63145098 | None:intergenic | 30.0% | |
| TGTATCTTACAGGAAAAAAC+AGG | + | chr4_2:63145121-63145140 | None:intergenic | 30.0% | |
| AATTTCTATACTGCTTCAGA+TGG | - | chr4_2:63145181-63145200 | Msa0614210:intron | 30.0% | |
| GAAAAATCGTGCAAATGAAT+TGG | + | chr4_2:63145256-63145275 | None:intergenic | 30.0% | |
| TAGATAATAGAATAGGTGAG+GGG | - | chr4_2:63145332-63145351 | Msa0614210:intron | 30.0% | |
| ! | TGACTTTTGTAGAAAACTAG+AGG | - | chr4_2:63145414-63145433 | Msa0614210:exon | 30.0% |
| GTACCTTGTATAAGTGATTA+AGG | - | chr4_2:63145486-63145505 | Msa0614210:five_prime_UTR | 30.0% | |
| ! | GTGCATTTTTGTGACAATAA+AGG | - | chr4_2:63145508-63145527 | Msa0614210:five_prime_UTR | 30.0% |
| AGTTTGGGGAATAGGATTTA+GGG | + | chr4_2:63139954-63139973 | None:intergenic | 35.0% | |
| TAGTTTGGGGAATAGGATTT+AGG | + | chr4_2:63139955-63139974 | None:intergenic | 35.0% | |
| ATCCTATTCCCCAAACTAAA+TGG | - | chr4_2:63139957-63139976 | Msa0614210:three_prime_UTR | 35.0% | |
| !! | AGAAGAAGCCATTTAGTTTG+GGG | + | chr4_2:63139968-63139987 | None:intergenic | 35.0% |
| ! | GAGAAGAAGCCATTTAGTTT+GGG | + | chr4_2:63139969-63139988 | None:intergenic | 35.0% |
| AGAGAAGAAGCCATTTAGTT+TGG | + | chr4_2:63139970-63139989 | None:intergenic | 35.0% | |
| GAAAAGAAGGAAGAAAGAGA+AGG | + | chr4_2:63140036-63140055 | None:intergenic | 35.0% | |
| AAGCGGTTTCAGAAGATAAA+TGG | + | chr4_2:63140058-63140077 | None:intergenic | 35.0% | |
| GGAAAGTTTAGGTAAAGCTT+TGG | + | chr4_2:63140383-63140402 | None:intergenic | 35.0% | |
| AATTGGGCTAAGGAAAGTTT+AGG | + | chr4_2:63140394-63140413 | None:intergenic | 35.0% | |
| TTTACACTAACACGTCAACA+CGG | - | chr4_2:63140488-63140507 | Msa0614210:CDS | 35.0% | |
| TGAATCAGCACAACTTAATG+CGG | - | chr4_2:63140923-63140942 | Msa0614210:CDS | 35.0% | |
| ! | ATGGAAGCAAAACCTTTTGT+TGG | + | chr4_2:63141032-63141051 | None:intergenic | 35.0% |
| ! | AATAACGGAAATCTAAGTGG+AGG | + | chr4_2:63141142-63141161 | None:intergenic | 35.0% |
| ACTGACATTAGTACTTCAGA+TGG | - | chr4_2:63141163-63141182 | Msa0614210:intron | 35.0% | |
| ATTAGTACTTCAGATGGTAG+TGG | - | chr4_2:63141169-63141188 | Msa0614210:intron | 35.0% | |
| ! | ATGGCTTTTATTGTGAAGCA+CGG | - | chr4_2:63141263-63141282 | Msa0614210:intron | 35.0% |
| TGACAGTGGTATGTACAATT+TGG | - | chr4_2:63141396-63141415 | Msa0614210:intron | 35.0% | |
| ATTTACTCACCTTCATGTGA+TGG | - | chr4_2:63141498-63141517 | Msa0614210:intron | 35.0% | |
| TAAAGTTGACCATCACATGA+AGG | + | chr4_2:63141510-63141529 | None:intergenic | 35.0% | |
| TTCATGTGATGGTCAACTTT+AGG | - | chr4_2:63141509-63141528 | Msa0614210:intron | 35.0% | |
| TCATGTGATGGTCAACTTTA+GGG | - | chr4_2:63141510-63141529 | Msa0614210:intron | 35.0% | |
| !! | GTTTTGAATCTTTGGATGCA+AGG | + | chr4_2:63141864-63141883 | None:intergenic | 35.0% |
| TGCGAAATACGTTGTATGTT+AGG | - | chr4_2:63142143-63142162 | Msa0614210:intron | 35.0% | |
| TTAATAGCAAGTTGCCCATT+AGG | - | chr4_2:63142223-63142242 | Msa0614210:intron | 35.0% | |
| TAATAGCAAGTTGCCCATTA+GGG | - | chr4_2:63142224-63142243 | Msa0614210:intron | 35.0% | |
| GGGAAATTCTTATGAGTTGT+AGG | - | chr4_2:63142308-63142327 | Msa0614210:CDS | 35.0% | |
| CTTATGAGTTGTAGGTTTGA+CGG | - | chr4_2:63142316-63142335 | Msa0614210:CDS | 35.0% | |
| ! | TGACGGAATATGTTTCTGTT+AGG | - | chr4_2:63142333-63142352 | Msa0614210:CDS | 35.0% |
| GTTTCTCTAACTACTACCAA+AGG | + | chr4_2:63142402-63142421 | None:intergenic | 35.0% | |
| !! | TGTTACTGTTGGTTTATTGC+AGG | - | chr4_2:63142501-63142520 | Msa0614210:intron | 35.0% |
| TGTTTAATAACTGCAGTGCA+AGG | + | chr4_2:63142851-63142870 | None:intergenic | 35.0% | |
| AGCTAAAGATGAATCAGGTA+AGG | + | chr4_2:63142942-63142961 | None:intergenic | 35.0% | |
| AAGGAAGAGAGATAAACTAG+TGG | - | chr4_2:63143043-63143062 | Msa0614210:intron | 35.0% | |
| TGCACTAATACCAACAATGT+GGG | - | chr4_2:63143079-63143098 | Msa0614210:intron | 35.0% | |
| CTATAACAGTTAGCTGTGAA+TGG | + | chr4_2:63143107-63143126 | None:intergenic | 35.0% | |
| CATTCACAGCTAACTGTTAT+AGG | - | chr4_2:63143105-63143124 | Msa0614210:intron | 35.0% | |
| ATTATTATTACACCCTCAGC+AGG | + | chr4_2:63143524-63143543 | None:intergenic | 35.0% | |
| TTTGATGAAGTCCCTACATT+TGG | - | chr4_2:63143618-63143637 | Msa0614210:intron | 35.0% | |
| TGGAATAGAAGCTAAGCTAT+TGG | - | chr4_2:63143638-63143657 | Msa0614210:intron | 35.0% | |
| AAGCTAAGCTATTGGCATAA+AGG | - | chr4_2:63143646-63143665 | Msa0614210:intron | 35.0% | |
| !!! | ATTTTAAGGTGCCAATCCTA+GGG | + | chr4_2:63143686-63143705 | None:intergenic | 35.0% |
| !!! | TATTTTAAGGTGCCAATCCT+AGG | + | chr4_2:63143687-63143706 | None:intergenic | 35.0% |
| GTTCTGATCCACAAATACTT+TGG | - | chr4_2:63143838-63143857 | Msa0614210:intron | 35.0% | |
| ! | TGTTGAAGCCAAAGTATTTG+TGG | + | chr4_2:63143849-63143868 | None:intergenic | 35.0% |
| GTAAAAAGAACCTTGATCCA+GGG | - | chr4_2:63143945-63143964 | Msa0614210:intron | 35.0% | |
| ! | CTCTTAGTGGATCATATTTG+TGG | + | chr4_2:63143972-63143991 | None:intergenic | 35.0% |
| CACAAATATGATCCACTAAG+AGG | - | chr4_2:63143970-63143989 | Msa0614210:intron | 35.0% | |
| ACACAAAGTTTACCTCTTAG+TGG | + | chr4_2:63143985-63144004 | None:intergenic | 35.0% | |
| GAGGTAAACTTTGTGTGTTT+AGG | - | chr4_2:63143989-63144008 | Msa0614210:intron | 35.0% | |
| AAGACTTCACTCAAACTTGT+GGG | + | chr4_2:63144026-63144045 | None:intergenic | 35.0% | |
| GTCAATGAGAATTCAATTCC+TGG | + | chr4_2:63144094-63144113 | None:intergenic | 35.0% | |
| AGCCTGCAGAATTTGAAAAT+CGG | - | chr4_2:63144246-63144265 | Msa0614210:intron | 35.0% | |
| ! | TTGACACTTAGCCTTTGTTA+TGG | - | chr4_2:63144330-63144349 | Msa0614210:CDS | 35.0% |
| GAAATGTCCAACCATAACAA+AGG | + | chr4_2:63144344-63144363 | None:intergenic | 35.0% | |
| CTTATTTAACAGGGTGACAT+TGG | - | chr4_2:63144363-63144382 | Msa0614210:CDS | 35.0% | |
| TATTTAACAGGGTGACATTG+GGG | - | chr4_2:63144365-63144384 | Msa0614210:CDS | 35.0% | |
| !! | AACTAGATGTTTTAGGCAGT+TGG | - | chr4_2:63144802-63144821 | Msa0614210:intron | 35.0% |
| GAAGCTAATGACAAACAATC+CGG | - | chr4_2:63144894-63144913 | Msa0614210:intron | 35.0% | |
| AACAATCCGGCAAAATATGT+TGG | - | chr4_2:63144907-63144926 | Msa0614210:intron | 35.0% | |
| ACAATCCGGCAAAATATGTT+GGG | - | chr4_2:63144908-63144927 | Msa0614210:intron | 35.0% | |
| GAAACCAAACGTGTGAAAAT+GGG | - | chr4_2:63145009-63145028 | Msa0614210:intron | 35.0% | |
| AAAAAACAGGTTTATGTGCC+AGG | + | chr4_2:63145108-63145127 | None:intergenic | 35.0% | |
| GCACCTTAATCACTTATACA+AGG | + | chr4_2:63145492-63145511 | None:intergenic | 35.0% | |
| !! | TAAAGGTGCTCTTTGTTGAA+AGG | - | chr4_2:63145525-63145544 | Msa0614210:five_prime_UTR | 35.0% |
| ! | TGTTGGATTGGATGAGAAGA+AGG | + | chr4_2:63139871-63139890 | None:intergenic | 40.0% |
| !! | AGCCATTTAGTTTGGGGAAT+AGG | + | chr4_2:63139962-63139981 | None:intergenic | 40.0% |
| !! | TCTTCTGAAACCGCTTTCTT+AGG | - | chr4_2:63140062-63140081 | Msa0614210:three_prime_UTR | 40.0% |
| AGATAAGAGGACCAAAGTTG+TGG | + | chr4_2:63140308-63140327 | None:intergenic | 40.0% | |
| TTACACTAACACGTCAACAC+GGG | - | chr4_2:63140489-63140508 | Msa0614210:CDS | 40.0% | |
| TGTCAAACACAGACACATGT+CGG | - | chr4_2:63140553-63140572 | Msa0614210:intron | 40.0% | |
| GCTCAGATTTGGCATTTGTT+CGG | - | chr4_2:63140799-63140818 | Msa0614210:CDS | 40.0% | |
| GATTCAGACAGTCCAACAAA+AGG | - | chr4_2:63141017-63141036 | Msa0614210:intron | 40.0% | |
| CTGAGGCTATTGAAGACATT+CGG | - | chr4_2:63141054-63141073 | Msa0614210:intron | 40.0% | |
| GCTATTGAAGACATTCGGAA+TGG | - | chr4_2:63141059-63141078 | Msa0614210:intron | 40.0% | |
| TGAAGACATTCGGAATGGAA+AGG | - | chr4_2:63141064-63141083 | Msa0614210:intron | 40.0% | |
| TCTAATAATGGCAGCACAGT+TGG | - | chr4_2:63141226-63141245 | Msa0614210:intron | 40.0% | |
| ACAATAAAAGCCATAGCCTC+AGG | + | chr4_2:63141257-63141276 | None:intergenic | 40.0% | |
| TTTATTGTGAAGCACGGAAC+TGG | - | chr4_2:63141269-63141288 | Msa0614210:intron | 40.0% | |
| GAGATTAGAGCTTCCTTTGA+TGG | - | chr4_2:63141328-63141347 | Msa0614210:intron | 40.0% | |
| ! | TTCCTTTGATGGTCAACAGT+CGG | - | chr4_2:63141339-63141358 | Msa0614210:intron | 40.0% |
| !!! | GGTGCGTGCATTTTTTTATC+TGG | - | chr4_2:63141417-63141436 | Msa0614210:intron | 40.0% |
| ! | ATTTTGTTCCTACGCAACTC+AGG | - | chr4_2:63141753-63141772 | Msa0614210:intron | 40.0% |
| TGTGAGGTTGTAGATGATGA+TGG | - | chr4_2:63142018-63142037 | Msa0614210:intron | 40.0% | |
| !! | TGTAGATGATGATGGTTCCA+TGG | - | chr4_2:63142026-63142045 | Msa0614210:intron | 40.0% |
| AAGCTTAGGTAATCTAGCCA+TGG | + | chr4_2:63142046-63142065 | None:intergenic | 40.0% | |
| ! | AATTTTCACGCTCTGCAAAC+TGG | + | chr4_2:63142071-63142090 | None:intergenic | 40.0% |
| ATGTTAGGACCCAATATGAG+AGG | - | chr4_2:63142158-63142177 | Msa0614210:intron | 40.0% | |
| TGTTAGGACCCAATATGAGA+GGG | - | chr4_2:63142159-63142178 | Msa0614210:intron | 40.0% | |
| TAGTTAGTAGGTGGCTAAGT+TGG | - | chr4_2:63142190-63142209 | Msa0614210:intron | 40.0% | |
| AGTTAGTAGGTGGCTAAGTT+GGG | - | chr4_2:63142191-63142210 | Msa0614210:intron | 40.0% | |
| ! | TGTTTGTGCTGTGTTACTGT+TGG | - | chr4_2:63142490-63142509 | Msa0614210:intron | 40.0% |
| TGGTTTATTGCAGGATCCAT+TGG | - | chr4_2:63142510-63142529 | Msa0614210:intron | 40.0% | |
| GGTTTATTGCAGGATCCATT+GGG | - | chr4_2:63142511-63142530 | Msa0614210:intron | 40.0% | |
| CATACAATGGTAGAACCCAA+TGG | + | chr4_2:63142529-63142548 | None:intergenic | 40.0% | |
| ! | GTGCTTGCTCCTAATTTTAG+AGG | - | chr4_2:63142693-63142712 | Msa0614210:intron | 40.0% |
| ! | CTGCAGTGCAAGGTATTTAA+TGG | + | chr4_2:63142841-63142860 | None:intergenic | 40.0% |
| ! | AGCGCAGTTAAATTTTTCCG+TGG | - | chr4_2:63142885-63142904 | Msa0614210:intron | 40.0% |
| !!! | TCTTTTCTGGTTACCTATCG+AGG | - | chr4_2:63142989-63143008 | Msa0614210:intron | 40.0% |
| TAGGTGTTAATCTCCTCGAT+AGG | + | chr4_2:63143005-63143024 | None:intergenic | 40.0% | |
| TCGAGGAGATTAACACCTAT+TGG | - | chr4_2:63143006-63143025 | Msa0614210:intron | 40.0% | |
| GAGATTAACACCTATTGGTC+TGG | - | chr4_2:63143011-63143030 | Msa0614210:intron | 40.0% | |
| CTGCACTAATACCAACAATG+TGG | - | chr4_2:63143078-63143097 | Msa0614210:intron | 40.0% | |
| GCACTAATACCAACAATGTG+GGG | - | chr4_2:63143080-63143099 | Msa0614210:intron | 40.0% | |
| CACTAATACCAACAATGTGG+GGG | - | chr4_2:63143081-63143100 | Msa0614210:intron | 40.0% | |
| !!! | TAGGTCACTTTTAGATGGGA+TGG | - | chr4_2:63143124-63143143 | Msa0614210:intron | 40.0% |
| ! | TTTTTATATCCTGCCTGCTG+AGG | - | chr4_2:63143508-63143527 | Msa0614210:CDS | 40.0% |
| ! | TTTTATATCCTGCCTGCTGA+GGG | - | chr4_2:63143509-63143528 | Msa0614210:CDS | 40.0% |
| CTCTCTGGACTTCAAGAATT+GGG | + | chr4_2:63143564-63143583 | None:intergenic | 40.0% | |
| TCTCTCTGGACTTCAAGAAT+TGG | + | chr4_2:63143565-63143584 | None:intergenic | 40.0% | |
| ! | TTGTGAGTTGAAACTCTCTC+TGG | + | chr4_2:63143579-63143598 | None:intergenic | 40.0% |
| GGAAAATGACTTACTTCCCT+AGG | - | chr4_2:63143667-63143686 | Msa0614210:intron | 40.0% | |
| ATGACTTACTTCCCTAGGAT+TGG | - | chr4_2:63143672-63143691 | Msa0614210:intron | 40.0% | |
| !!! | TTTTTTGGGACTTCTAGCCT+TGG | + | chr4_2:63143740-63143759 | None:intergenic | 40.0% |
| AACTCATGGGAAAAAGACGA+AGG | + | chr4_2:63143778-63143797 | None:intergenic | 40.0% | |
| ATGATATAGAATGCCTGAGC+AGG | - | chr4_2:63143875-63143894 | Msa0614210:intron | 40.0% | |
| GGTAAAAAGAACCTTGATCC+AGG | - | chr4_2:63143944-63143963 | Msa0614210:intron | 40.0% | |
| CAAGACTTCACTCAAACTTG+TGG | + | chr4_2:63144027-63144046 | None:intergenic | 40.0% | |
| CACAAGTTTGAGTGAAGTCT+TGG | - | chr4_2:63144025-63144044 | Msa0614210:CDS | 40.0% | |
| AGAAAGATGACTAGATCCCT+GGG | + | chr4_2:63144056-63144075 | None:intergenic | 40.0% | |
| TAGAAAGATGACTAGATCCC+TGG | + | chr4_2:63144057-63144076 | None:intergenic | 40.0% | |
| !!! | TGCCGATTTTCAAATTCTGC+AGG | + | chr4_2:63144251-63144270 | None:intergenic | 40.0% |
| ! | CACTTAGCCTTTGTTATGGT+TGG | - | chr4_2:63144334-63144353 | Msa0614210:CDS | 40.0% |
| ATGGATGTGATGTTCTTGTG+AGG | - | chr4_2:63144388-63144407 | Msa0614210:CDS | 40.0% | |
| TGGATGTGATGTTCTTGTGA+GGG | - | chr4_2:63144389-63144408 | Msa0614210:CDS | 40.0% | |
| TGTCTCACAGGAGACATATT+TGG | - | chr4_2:63144423-63144442 | Msa0614210:CDS | 40.0% | |
| TCTTGCAATGCAACAGATTG+AGG | - | chr4_2:63144479-63144498 | Msa0614210:CDS | 40.0% | |
| GTATATCTTCGAGGACATGA+AGG | - | chr4_2:63144522-63144541 | Msa0614210:CDS | 40.0% | |
| TGCTTATAACCTACAGGATG+AGG | - | chr4_2:63144575-63144594 | Msa0614210:CDS | 40.0% | |
| GCTTATAACCTACAGGATGA+GGG | - | chr4_2:63144576-63144595 | Msa0614210:CDS | 40.0% | |
| ATTGCAGATATTGAGGGACT+TGG | - | chr4_2:63144858-63144877 | Msa0614210:intron | 40.0% | |
| TTGCAGATATTGAGGGACTT+GGG | - | chr4_2:63144859-63144878 | Msa0614210:intron | 40.0% | |
| ! | TTGAGCCCAACATATTTTGC+CGG | + | chr4_2:63144916-63144935 | None:intergenic | 40.0% |
| GCAAAATATGTTGGGCTCAA+AGG | - | chr4_2:63144916-63144935 | Msa0614210:intron | 40.0% | |
| TATGTTGGGCTCAAAGGTTA+TGG | - | chr4_2:63144922-63144941 | Msa0614210:intron | 40.0% | |
| ! | GGTTATGGTTTGTCCATTTC+AGG | - | chr4_2:63144937-63144956 | Msa0614210:intron | 40.0% |
| ! | ATGGTTTGTCCATTTCAGGT+AGG | - | chr4_2:63144941-63144960 | Msa0614210:intron | 40.0% |
| GGAAACCAAACGTGTGAAAA+TGG | - | chr4_2:63145008-63145027 | Msa0614210:intron | 40.0% | |
| GTGAAAATGGGTCACATGTA+TGG | - | chr4_2:63145021-63145040 | Msa0614210:intron | 40.0% | |
| TATGTCGCACAAAACAGAAG+AGG | - | chr4_2:63145146-63145165 | Msa0614210:intron | 40.0% | |
| ! | TGCACGATTTTTCTTCTGTC+TGG | - | chr4_2:63145263-63145282 | Msa0614210:intron | 40.0% |
| GGTGGAATGCTCAAAGATGT+TGG | + | chr4_2:63139850-63139869 | None:intergenic | 45.0% | |
| ! | TGGATTGGATGAGAAGAAGG+TGG | + | chr4_2:63139868-63139887 | None:intergenic | 45.0% |
| CGTTCTGTGTTGTGTTGGAT+TGG | + | chr4_2:63139883-63139902 | None:intergenic | 45.0% | |
| AGAGAAGGTAAAACTGACCG+TGG | + | chr4_2:63140021-63140040 | None:intergenic | 45.0% | |
| ! | GGTAAAGCTTTGGCAAGACA+TGG | + | chr4_2:63140373-63140392 | None:intergenic | 45.0% |
| ! | ACGCCTTTGATCAGAAGTGT+CGG | - | chr4_2:63140585-63140604 | Msa0614210:intron | 45.0% |
| ! | GTACCGACACTTCTGATCAA+AGG | + | chr4_2:63140591-63140610 | None:intergenic | 45.0% |
| CCACGCACATGAATCATAGA+CGG | + | chr4_2:63140780-63140799 | None:intergenic | 45.0% | |
| ATTCCCTTCATGTCGCAATG+CGG | - | chr4_2:63140833-63140852 | Msa0614210:CDS | 45.0% | |
| ATACCGCATTGCGACATGAA+GGG | + | chr4_2:63140839-63140858 | None:intergenic | 45.0% | |
| ! | AGGTTTTGCTTCCATACCTG+AGG | - | chr4_2:63141037-63141056 | Msa0614210:intron | 45.0% |
| GTCTTCAATAGCCTCAGGTA+TGG | + | chr4_2:63141051-63141070 | None:intergenic | 45.0% | |
| CGAATGTCTTCAATAGCCTC+AGG | + | chr4_2:63141056-63141075 | None:intergenic | 45.0% | |
| GACATTCGGAATGGAAAGGT+CGG | - | chr4_2:63141068-63141087 | Msa0614210:intron | 45.0% | |
| AAGCATGAAAGAGGAAGACC+TGG | - | chr4_2:63141304-63141323 | Msa0614210:intron | 45.0% | |
| ! | AAGGAAGCTCTAATCTCTCC+AGG | + | chr4_2:63141325-63141344 | None:intergenic | 45.0% |
| ! | TCCTTTGATGGTCAACAGTC+GGG | - | chr4_2:63141340-63141359 | Msa0614210:intron | 45.0% |
| CTGTCACAGTGAATGCTGTA+CGG | + | chr4_2:63141382-63141401 | None:intergenic | 45.0% | |
| TACAGCATTCACTGTGACAG+TGG | - | chr4_2:63141382-63141401 | Msa0614210:intron | 45.0% | |
| GATAAGTTCCTGAGTTGCGT+AGG | + | chr4_2:63141764-63141783 | None:intergenic | 45.0% | |
| ACCTGTGGTGGTACCATATT+TGG | + | chr4_2:63141806-63141825 | None:intergenic | 45.0% | |
| TTAGCGGGAAAATATGGCCT+GGG | + | chr4_2:63141903-63141922 | None:intergenic | 45.0% | |
| TTTAGCGGGAAAATATGGCC+TGG | + | chr4_2:63141904-63141923 | None:intergenic | 45.0% | |
| TTCCCGCTAAAATACAGGGA+AGG | - | chr4_2:63141913-63141932 | Msa0614210:intron | 45.0% | |
| !!! | CACCTTCCCTGTATTTTAGC+GGG | + | chr4_2:63141918-63141937 | None:intergenic | 45.0% |
| !! | CCACCTTCCCTGTATTTTAG+CGG | + | chr4_2:63141919-63141938 | None:intergenic | 45.0% |
| GTTGATCTTGCAGTACTTGC+TGG | - | chr4_2:63141973-63141992 | Msa0614210:intron | 45.0% | |
| ! | TCTTGCAGTACTTGCTGGTT+TGG | - | chr4_2:63141978-63141997 | Msa0614210:intron | 45.0% |
| GTTTCTGTTAGGACCAGAGT+AGG | - | chr4_2:63142344-63142363 | Msa0614210:intron | 45.0% | |
| ! | TTAACACCTATTGGTCTGGC+AGG | - | chr4_2:63143015-63143034 | Msa0614210:intron | 45.0% |
| TCTATACCTGCCAGACCAAT+AGG | + | chr4_2:63143024-63143043 | None:intergenic | 45.0% | |
| ! | ATTGGTCTGGCAGGTATAGA+AGG | - | chr4_2:63143024-63143043 | Msa0614210:intron | 45.0% |
| GATAAACTAGTGGAACGTGC+TGG | - | chr4_2:63143053-63143072 | Msa0614210:intron | 45.0% | |
| GGAGCATATTGCGATGGTAA+AGG | - | chr4_2:63143145-63143164 | Msa0614210:intron | 45.0% | |
| AACCTGTTGTTACATTGCCG+TGG | - | chr4_2:63143410-63143429 | Msa0614210:CDS | 45.0% | |
| ATTCTGCAGCATTGTCCTGA+TGG | - | chr4_2:63143806-63143825 | Msa0614210:intron | 45.0% | |
| TATTTGTGGACCCTGGATCA+AGG | + | chr4_2:63143958-63143977 | None:intergenic | 45.0% | |
| TGGATCATATTTGTGGACCC+TGG | + | chr4_2:63143965-63143984 | None:intergenic | 45.0% | |
| CAAACTTGTGGGCATTAGAG+TGG | + | chr4_2:63144015-63144034 | None:intergenic | 45.0% | |
| TCTATTTGGATGTGTTGCCC+AGG | - | chr4_2:63144073-63144092 | Msa0614210:CDS | 45.0% | |
| GAGACATATTTGGATCTGCC+AGG | - | chr4_2:63144433-63144452 | Msa0614210:CDS | 45.0% | |
| GTGTGACTGCGGAAATCAAT+TGG | - | chr4_2:63144455-63144474 | Msa0614210:CDS | 45.0% | |
| ! | GGTGTGTTGGTATATCTTCG+AGG | - | chr4_2:63144513-63144532 | Msa0614210:CDS | 45.0% |
| ATCTTCGAGGACATGAAGGA+AGG | - | chr4_2:63144526-63144545 | Msa0614210:CDS | 45.0% | |
| TCTTCGAGGACATGAAGGAA+GGG | - | chr4_2:63144527-63144546 | Msa0614210:CDS | 45.0% | |
| !! | TGAAGGAAGGGGTATTGGAT+TGG | - | chr4_2:63144539-63144558 | Msa0614210:CDS | 45.0% |
| !! | GAAGGAAGGGGTATTGGATT+GGG | - | chr4_2:63144540-63144559 | Msa0614210:CDS | 45.0% |
| GGTTATAAGCACGAAGCTTG+TGG | + | chr4_2:63144566-63144585 | None:intergenic | 45.0% | |
| GCTTCGTGCTTATAACCTAC+AGG | - | chr4_2:63144569-63144588 | Msa0614210:CDS | 45.0% | |
| ATAACCTACAGGATGAGGGA+AGG | - | chr4_2:63144580-63144599 | Msa0614210:CDS | 45.0% | |
| TAACCTACAGGATGAGGGAA+GGG | - | chr4_2:63144581-63144600 | Msa0614210:CDS | 45.0% | |
| GGATACTGTAGAAGCCAATG+AGG | - | chr4_2:63144602-63144621 | Msa0614210:CDS | 45.0% | |
| TGTAGAAGCCAATGAGGAGT+TGG | - | chr4_2:63144608-63144627 | Msa0614210:CDS | 45.0% | |
| GTAGAAGCCAATGAGGAGTT+GGG | - | chr4_2:63144609-63144628 | Msa0614210:CDS | 45.0% | |
| ! | GACTCAAGGGAGTATGGAAT+TGG | - | chr4_2:63144642-63144661 | Msa0614210:CDS | 45.0% |
| CAATGGGATCCTACCTGAAA+TGG | + | chr4_2:63144953-63144972 | None:intergenic | 45.0% | |
| ! | GTGACCCATTTTCACACGTT+TGG | + | chr4_2:63145016-63145035 | None:intergenic | 45.0% |
| AATGGGTCACATGTATGGCT+TGG | - | chr4_2:63145026-63145045 | Msa0614210:intron | 45.0% | |
| TCGCACAAAACAGAAGAGGA+AGG | - | chr4_2:63145150-63145169 | Msa0614210:intron | 45.0% | |
| CGCACAAAACAGAAGAGGAA+GGG | - | chr4_2:63145151-63145170 | Msa0614210:intron | 45.0% | |
| !! | TATATGATTAAAAAAAAAAA+AGG | + | chr4_2:63143371-63143390 | None:intergenic | 5.0% |
| !!! | TTTATTTTTTTATTTTCTTT+AGG | - | chr4_2:63144165-63144184 | Msa0614210:CDS | 5.0% |
| !!! | AATATAAATTTAAAATTGAA+AGG | + | chr4_2:63144295-63144314 | None:intergenic | 5.0% |
| TGCTGCGTTCTGTGTTGTGT+TGG | + | chr4_2:63139888-63139907 | None:intergenic | 50.0% | |
| CCGTCTATGATTCATGTGCG+TGG | - | chr4_2:63140777-63140796 | Msa0614210:CDS | 50.0% | |
| TCATGTGCGTGGCTCAGATT+TGG | - | chr4_2:63140788-63140807 | Msa0614210:CDS | 50.0% | |
| CATACCGCATTGCGACATGA+AGG | + | chr4_2:63140840-63140859 | None:intergenic | 50.0% | |
| ! | GTTAAAGCTGCGTTGACCTC+TGG | - | chr4_2:63140864-63140883 | Msa0614210:CDS | 50.0% |
| !! | TTTTAGGTCTCCTCCTCCAG+AGG | + | chr4_2:63140883-63140902 | None:intergenic | 50.0% |
| CAACTTAATGCGGTAGCGCT+TGG | - | chr4_2:63140933-63140952 | Msa0614210:CDS | 50.0% | |
| ! | GATACAGCTCTAACAGGCAG+TGG | - | chr4_2:63140969-63140988 | Msa0614210:CDS | 50.0% |
| TCGGTACTCTGTCTCTCTGT+GGG | - | chr4_2:63141087-63141106 | Msa0614210:intron | 50.0% | |
| ! | GGTAGTGGTTGTAGATGACG+AGG | - | chr4_2:63141184-63141203 | Msa0614210:intron | 50.0% |
| GACGAGGACAGAGAAAACGA+AGG | - | chr4_2:63141200-63141219 | Msa0614210:intron | 50.0% | |
| TCCCGACTGTTGACCATCAA+AGG | + | chr4_2:63141344-63141363 | None:intergenic | 50.0% | |
| TGCCTACACAAGTGCAGCTA+GGG | + | chr4_2:63141550-63141569 | None:intergenic | 50.0% | |
| ATGCCTACACAAGTGCAGCT+AGG | + | chr4_2:63141551-63141570 | None:intergenic | 50.0% | |
| GCCAAATATGGTACCACCAC+AGG | - | chr4_2:63141802-63141821 | Msa0614210:intron | 50.0% | |
| ! | GGATAGGGCAACCACAGTTT+TGG | - | chr4_2:63141837-63141856 | Msa0614210:intron | 50.0% |
| CCGCTAAAATACAGGGAAGG+TGG | - | chr4_2:63141916-63141935 | Msa0614210:intron | 50.0% | |
| GGTGGTATCTTGAAGAGAGC+TGG | - | chr4_2:63141934-63141953 | Msa0614210:intron | 50.0% | |
| !! | ACTTGCTGGTTTGGATCCTG+TGG | - | chr4_2:63141987-63142006 | Msa0614210:intron | 50.0% |
| TCTGCAAACTGGCGAAGCTT+AGG | + | chr4_2:63142060-63142079 | None:intergenic | 50.0% | |
| CTGACTCAGGAATCCTACTC+TGG | + | chr4_2:63142360-63142379 | None:intergenic | 50.0% | |
| CCTGAGTCAGTGAGTTGTGT+CGG | - | chr4_2:63142370-63142389 | Msa0614210:intron | 50.0% | |
| GTTGTGTCGGAGCTTTCCTT+TGG | - | chr4_2:63142383-63142402 | Msa0614210:intron | 50.0% | |
| CACGGTAGCAGACAACATGA+GGG | + | chr4_2:63142613-63142632 | None:intergenic | 50.0% | |
| TCACGGTAGCAGACAACATG+AGG | + | chr4_2:63142614-63142633 | None:intergenic | 50.0% | |
| TGGGATGGAGCATATTGCGA+TGG | - | chr4_2:63143139-63143158 | Msa0614210:intron | 50.0% | |
| AGCCACGGCAATGTAACAAC+AGG | + | chr4_2:63143415-63143434 | None:intergenic | 50.0% | |
| TTATTACACCCTCAGCAGGC+AGG | + | chr4_2:63143520-63143539 | None:intergenic | 50.0% | |
| AAATTGTCTGCCAGCTGCCA+AGG | - | chr4_2:63143720-63143739 | Msa0614210:intron | 50.0% | |
| CAGAACTCTGCAAAGCCATC+AGG | + | chr4_2:63143824-63143843 | None:intergenic | 50.0% | |
| TAACAGGGTGACATTGGGGA+TGG | - | chr4_2:63144369-63144388 | Msa0614210:CDS | 50.0% | |
| ! | GTACACTCAGAGTGTCTCAC+AGG | - | chr4_2:63144411-63144430 | Msa0614210:CDS | 50.0% |
| TTGATTTCCGCAGTCACACC+TGG | + | chr4_2:63144454-63144473 | None:intergenic | 50.0% | |
| ATGCAACAGATTGAGGCTGC+TGG | - | chr4_2:63144486-63144505 | Msa0614210:CDS | 50.0% | |
| CTTCGAGGACATGAAGGAAG+GGG | - | chr4_2:63144528-63144547 | Msa0614210:CDS | 50.0% | |
| ! | GGACATGAAGGAAGGGGTAT+TGG | - | chr4_2:63144534-63144553 | Msa0614210:CDS | 50.0% |
| TATCCCTTCCCTCATCCTGT+AGG | + | chr4_2:63144587-63144606 | None:intergenic | 50.0% | |
| AGGCAATCCCAACTCCTCAT+TGG | + | chr4_2:63144619-63144638 | None:intergenic | 50.0% | |
| !! | TGGGATTGCCTGTTGACTCA+AGG | - | chr4_2:63144628-63144647 | Msa0614210:CDS | 50.0% |
| !! | GGGATTGCCTGTTGACTCAA+GGG | - | chr4_2:63144629-63144648 | Msa0614210:CDS | 50.0% |
| CCATACTCCCTTGAGTCAAC+AGG | + | chr4_2:63144639-63144658 | None:intergenic | 50.0% | |
| !! | CCTGTTGACTCAAGGGAGTA+TGG | - | chr4_2:63144636-63144655 | Msa0614210:CDS | 50.0% |
| GGAGTATGGAATTGGTGCAC+AGG | - | chr4_2:63144650-63144669 | Msa0614210:intron | 50.0% | |
| GATGATTCCAGTACTGCTCC+TGG | - | chr4_2:63145087-63145106 | Msa0614210:intron | 50.0% | |
| TTATGTGCCAGGAGCAGTAC+TGG | + | chr4_2:63145097-63145116 | None:intergenic | 50.0% | |
| ATAGAATAGGTGAGGGGCTG+AGG | - | chr4_2:63145338-63145357 | Msa0614210:intron | 50.0% | |
| TAGAATAGGTGAGGGGCTGA+GGG | - | chr4_2:63145339-63145358 | Msa0614210:intron | 50.0% | |
| CACAGACACATGTCGGACGT+TGG | - | chr4_2:63140560-63140579 | Msa0614210:intron | 55.0% | |
| ! | AAAGCTGCGTTGACCTCTGG+AGG | - | chr4_2:63140867-63140886 | Msa0614210:CDS | 55.0% |
| ! | GGGGCAGATACAGCTCTAAC+AGG | - | chr4_2:63140963-63140982 | Msa0614210:CDS | 55.0% |
| GTCGGTACTCTGTCTCTCTG+TGG | - | chr4_2:63141086-63141105 | Msa0614210:intron | 55.0% | |
| AGCACAGTTGGCAACACCTG+AGG | - | chr4_2:63141238-63141257 | Msa0614210:intron | 55.0% | |
| GTTGGCAACACCTGAGGCTA+TGG | - | chr4_2:63141244-63141263 | Msa0614210:intron | 55.0% | |
| TGGTACCACCACAGGTGTGT+CGG | - | chr4_2:63141810-63141829 | Msa0614210:intron | 55.0% | |
| !! | AGGTGTGTCGGCTCAGGATA+GGG | - | chr4_2:63141822-63141841 | Msa0614210:intron | 55.0% |
| GGATGCAAGGGCCAAAACTG+TGG | + | chr4_2:63141851-63141870 | None:intergenic | 55.0% | |
| CCTGGGCGGTTGAAATCACT+TGG | + | chr4_2:63141886-63141905 | None:intergenic | 55.0% | |
| CCAAGTGATTTCAACCGCCC+AGG | - | chr4_2:63141883-63141902 | Msa0614210:intron | 55.0% | |
| TCCTGTGGCAGTTCTGTGTG+AGG | - | chr4_2:63142002-63142021 | Msa0614210:intron | 55.0% | |
| ACCTCACACAGAACTGCCAC+AGG | + | chr4_2:63142006-63142025 | None:intergenic | 55.0% | |
| !! | CCGACACAACTCACTGACTC+AGG | + | chr4_2:63142373-63142392 | None:intergenic | 55.0% |
| GTGAATGGCCCCCACATTGT+TGG | + | chr4_2:63143092-63143111 | None:intergenic | 55.0% | |
| GGACATTCATCTGCCTGCTC+AGG | + | chr4_2:63143891-63143910 | None:intergenic | 55.0% | |
| TGAAGTCTTGGCCAGTCCCA+GGG | - | chr4_2:63144037-63144056 | Msa0614210:CDS | 55.0% | |
| GATGACTAGATCCCTGGGAC+TGG | + | chr4_2:63144051-63144070 | None:intergenic | 55.0% | |
| TGCGGTAGCGCTTGGAACAC+TGG | - | chr4_2:63140941-63140960 | Msa0614210:CDS | 60.0% | |
| GCGGTAGCGCTTGGAACACT+GGG | - | chr4_2:63140942-63140961 | Msa0614210:CDS | 60.0% | |
| CGGTAGCGCTTGGAACACTG+GGG | - | chr4_2:63140943-63140962 | Msa0614210:CDS | 60.0% | |
| GGTAGCGCTTGGAACACTGG+GGG | - | chr4_2:63140944-63140963 | Msa0614210:CDS | 60.0% | |
| CGCCCTAGCTGCACTTGTGT+AGG | - | chr4_2:63141545-63141564 | Msa0614210:intron | 60.0% | |
| ATCCTGAGCCGACACACCTG+TGG | + | chr4_2:63141821-63141840 | None:intergenic | 60.0% | |
| !! | CAGGTGTGTCGGCTCAGGAT+AGG | - | chr4_2:63141821-63141840 | Msa0614210:intron | 60.0% |
| GCGGGAAAATATGGCCTGGG+CGG | + | chr4_2:63141900-63141919 | None:intergenic | 60.0% | |
| !! | GGACTTCTAGCCTTGGCAGC+TGG | + | chr4_2:63143733-63143752 | None:intergenic | 60.0% |
| GTGAAGTCTTGGCCAGTCCC+AGG | - | chr4_2:63144036-63144055 | Msa0614210:CDS | 60.0% | |
| GGATCTGCCAGGTGTGACTG+CGG | - | chr4_2:63144444-63144463 | Msa0614210:CDS | 60.0% | |
| CAGATTGAGGCTGCTGGCAG+AGG | - | chr4_2:63144492-63144511 | Msa0614210:CDS | 60.0% | |
| TGGACGCGAGAGAGAGGGTG+TGG | + | chr4_2:63140001-63140020 | None:intergenic | 65.0% | |
| CACCCTCTCTCTCGCGTCCA+CGG | - | chr4_2:63140001-63140020 | Msa0614210:three_prime_UTR | 65.0% | |
| GACCGTGGACGCGAGAGAGA+GGG | + | chr4_2:63140006-63140025 | None:intergenic | 65.0% | |
| TGACCGTGGACGCGAGAGAG+AGG | + | chr4_2:63140007-63140026 | None:intergenic | 65.0% | |
| ! | GCTGCGTTGACCTCTGGAGG+AGG | - | chr4_2:63140870-63140889 | Msa0614210:CDS | 65.0% |
| CTGAGCCGACACACCTGTGG+TGG | + | chr4_2:63141818-63141837 | None:intergenic | 65.0% | |
| !! | CACCACAGGTGTGTCGGCTC+AGG | - | chr4_2:63141816-63141835 | Msa0614210:intron | 65.0% |
| ! | GGCTGCTGGCAGAGGTGTGT+TGG | - | chr4_2:63144500-63144519 | Msa0614210:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 63139840 | 63145557 | 63139840 | ID=Msa0614210;Name=Msa0614210 |
| chr4_2 | mRNA | 63139840 | 63145557 | 63139840 | ID=Msa0614210-mRNA-1;Parent=Msa0614210;Name=Msa0614210-mRNA-1;_AED=0.07;_eAED=0.07;_QI=136|0.83|0.85|1|1|1|7|441|524 |
| chr4_2 | exon | 63139840 | 63140532 | 63139840 | ID=Msa0614210-mRNA-1:exon:17552;Parent=Msa0614210-mRNA-1 |
| chr4_2 | exon | 63140726 | 63141022 | 63140726 | ID=Msa0614210-mRNA-1:exon:17551;Parent=Msa0614210-mRNA-1 |
| chr4_2 | exon | 63142231 | 63142360 | 63142231 | ID=Msa0614210-mRNA-1:exon:17550;Parent=Msa0614210-mRNA-1 |
| chr4_2 | exon | 63143327 | 63143598 | 63143327 | ID=Msa0614210-mRNA-1:exon:17549;Parent=Msa0614210-mRNA-1 |
| chr4_2 | exon | 63143994 | 63144215 | 63143994 | ID=Msa0614210-mRNA-1:exon:17548;Parent=Msa0614210-mRNA-1 |
| chr4_2 | exon | 63144312 | 63144666 | 63144312 | ID=Msa0614210-mRNA-1:exon:17547;Parent=Msa0614210-mRNA-1 |
| chr4_2 | exon | 63145375 | 63145557 | 63145375 | ID=Msa0614210-mRNA-1:exon:17546;Parent=Msa0614210-mRNA-1 |
| chr4_2 | five_prime_UTR | 63145422 | 63145557 | 63145422 | ID=Msa0614210-mRNA-1:five_prime_utr;Parent=Msa0614210-mRNA-1 |
| chr4_2 | CDS | 63145375 | 63145421 | 63145375 | ID=Msa0614210-mRNA-1:cds;Parent=Msa0614210-mRNA-1 |
| chr4_2 | CDS | 63144312 | 63144666 | 63144312 | ID=Msa0614210-mRNA-1:cds;Parent=Msa0614210-mRNA-1 |
| chr4_2 | CDS | 63143994 | 63144215 | 63143994 | ID=Msa0614210-mRNA-1:cds;Parent=Msa0614210-mRNA-1 |
| chr4_2 | CDS | 63143327 | 63143598 | 63143327 | ID=Msa0614210-mRNA-1:cds;Parent=Msa0614210-mRNA-1 |
| chr4_2 | CDS | 63142231 | 63142360 | 63142231 | ID=Msa0614210-mRNA-1:cds;Parent=Msa0614210-mRNA-1 |
| chr4_2 | CDS | 63140726 | 63141022 | 63140726 | ID=Msa0614210-mRNA-1:cds;Parent=Msa0614210-mRNA-1 |
| chr4_2 | CDS | 63140281 | 63140532 | 63140281 | ID=Msa0614210-mRNA-1:cds;Parent=Msa0614210-mRNA-1 |
| chr4_2 | three_prime_UTR | 63139840 | 63140280 | 63139840 | ID=Msa0614210-mRNA-1:three_prime_utr;Parent=Msa0614210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
