AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0942730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0942730 MtrunA17_Chr6g0459351 85.926 270 32 1 7 270 1 270 7.04e-170 470
Msa0942730 MtrunA17_Chr6g0459281 81.784 269 43 1 7 269 1 269 3.53e-157 438
Msa0942730 MtrunA17_Chr6g0459261 69.434 265 75 1 7 265 13 277 2.39e-132 375
Msa0942730 MtrunA17_Chr6g0459301 69.732 261 73 1 11 265 6 266 2.97e-129 367
Msa0942730 MtrunA17_Chr6g0459271 70.566 265 72 1 7 265 1 265 8.57e-129 366
Msa0942730 MtrunA17_Chr6g0459331 70.115 261 72 1 7 261 1 261 3.77e-122 349
Msa0942730 MtrunA17_Chr7g0270441 48.400 250 122 2 18 261 5 253 3.08e-74 227
Msa0942730 MtrunA17_Chr2g0324021 49.600 250 118 3 18 261 5 252 3.87e-74 227
Msa0942730 MtrunA17_Chr7g0270451 47.200 250 124 3 18 261 5 252 1.78e-70 218
Msa0942730 MtrunA17_Chr7g0266981 44.828 261 136 3 7 261 1 259 8.11e-67 209
Msa0942730 MtrunA17_Chr4g0044111 44.061 261 138 3 7 261 1 259 1.56e-65 205
Msa0942730 MtrunA17_Chr4g0025971 44.622 251 122 5 18 259 13 255 1.26e-61 195
Msa0942730 MtrunA17_Chr7g0266891 42.972 249 134 3 19 261 7 253 1.76e-61 195
Msa0942730 MtrunA17_Chr4g0026001 43.411 258 129 5 18 266 13 262 1.04e-58 188
Msa0942730 MtrunA17_Chr4g0025981 42.642 265 134 6 5 260 28 283 3.85e-58 188
Msa0942730 MtrunA17_Chr7g0244061 42.238 277 126 9 18 266 28 298 8.68e-58 186
Msa0942730 MtrunA17_Chr4g0040371 41.729 266 138 4 18 270 18 279 5.99e-56 181
Msa0942730 MtrunA17_Chr4g0044131 40.000 250 142 3 18 261 7 254 6.17e-53 173
Msa0942730 MtrunA17_Chr7g0252031 37.931 261 147 6 18 266 34 291 4.28e-51 169
Msa0942730 MtrunA17_Chr7g0268591 36.226 265 155 5 13 266 27 288 1.30e-48 162
Msa0942730 MtrunA17_Chr7g0267001 38.934 244 135 4 18 261 7 236 8.81e-46 154
Msa0942730 MtrunA17_Chr7g0267011 42.857 189 100 3 18 200 7 193 4.49e-45 150
Msa0942730 MtrunA17_Chr6g0463951 46.108 167 89 1 95 261 1 166 4.69e-42 142
Msa0942730 MtrunA17_Chr3g0084871 37.597 258 144 7 18 261 15 269 7.91e-42 144
Msa0942730 MtrunA17_Chr7g0266991 38.938 226 125 4 18 243 24 236 1.80e-39 137
Msa0942730 MtrunA17_Chr7g0270471 45.390 141 77 0 121 261 1 141 3.25e-38 131
Msa0942730 MtrunA17_Chr4g0044121 37.126 167 104 1 95 261 1 166 5.63e-29 108
Msa0942730 MtrunA17_Chr7g0270461 57.143 98 35 2 18 109 45 141 6.31e-26 99.4
Msa0942730 MtrunA17_Chr3g0142651 41.441 111 60 2 95 203 1 108 1.53e-24 95.5
Msa0942730 MtrunA17_Chr7g0259521 30.000 260 162 6 16 262 3 255 6.62e-24 97.4
Msa0942730 MtrunA17_Chr3g0122901 30.159 252 149 9 25 262 81 319 2.00e-21 91.7
Msa0942730 MtrunA17_Chr6g0459341 80.769 52 10 0 7 58 1 52 1.23e-20 84.3
Msa0942730 MtrunA17_Chr4g0075531 29.804 255 160 7 18 263 6 250 1.86e-20 87.8
Msa0942730 MtrunA17_Chr7g0259531 30.980 255 158 7 19 261 11 259 2.50e-20 87.8
Msa0942730 MtrunA17_Chr1g0191751 30.418 263 154 9 18 262 100 351 7.29e-20 87.8
Msa0942730 MtrunA17_Chr7g0272961 29.588 267 151 10 18 262 39 290 1.56e-19 85.9
Msa0942730 MtrunA17_Chr1g0182511 29.008 262 161 7 17 262 12 264 9.76e-18 80.5
Msa0942730 MtrunA17_Chr7g0239451 27.820 266 178 6 8 263 5 266 6.60e-17 78.2
Msa0942730 MtrunA17_Chr4g0074511 26.592 267 162 7 14 259 35 288 7.68e-17 78.6
Msa0942730 MtrunA17_Chr7g0239481 29.323 266 170 7 9 262 5 264 5.09e-15 73.2
Msa0942730 MtrunA17_Chr7g0239501 27.778 270 169 8 8 261 5 264 1.98e-14 71.2
Msa0942730 MtrunA17_Chr4g0028911 27.273 253 155 8 19 252 11 253 4.52e-14 70.5
Msa0942730 MtrunA17_Chr7g0239491 26.592 267 177 8 9 263 5 264 5.99e-14 70.1
Msa0942730 MtrunA17_Chr0c30g0494101 26.119 268 160 8 14 259 35 286 3.23e-13 68.2
Msa0942730 MtrunA17_Chr4g0028921 26.953 256 152 9 19 252 11 253 3.63e-13 67.8
Msa0942730 MtrunA17_Chr4g0032181 29.060 234 148 9 36 259 18 243 1.54e-11 63.2
Msa0942730 MtrunA17_Chr3g0112271 28.000 250 164 8 19 259 17 259 2.88e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0942730 AT2G47140.1 49.200 250 119 3 18 261 5 252 7.72e-74 226
Msa0942730 AT3G29250.3 44.151 265 138 4 5 261 26 288 2.19e-66 209
Msa0942730 AT3G29250.2 45.059 253 131 3 15 261 2 252 4.01e-66 207
Msa0942730 AT2G47130.1 46.693 257 120 6 15 261 2 251 5.47e-66 206
Msa0942730 AT3G29260.1 46.800 250 124 4 18 261 5 251 8.31e-66 206
Msa0942730 AT2G47120.1 45.455 253 128 5 15 261 2 250 2.90e-65 204
Msa0942730 AT2G47120.2 45.600 250 126 5 18 261 6 251 1.49e-64 202
Msa0942730 AT3G29250.1 43.820 267 138 5 5 261 26 290 1.78e-64 204
Msa0942730 AT3G51680.1 39.789 284 143 6 7 266 20 299 3.48e-55 180
Msa0942730 AT3G26760.1 38.290 269 149 7 12 266 29 294 1.52e-51 171
Msa0942730 AT3G26770.1 36.923 260 149 6 18 265 40 296 6.43e-49 164
Msa0942730 AT4G03140.1 36.923 260 150 5 18 266 77 333 4.58e-48 163
Msa0942730 AT3G42960.1 39.416 274 146 7 12 270 1 269 1.38e-45 154
Msa0942730 AT1G52340.1 40.230 261 136 8 18 261 17 274 1.02e-44 152
Msa0942730 AT3G03980.1 29.927 274 163 7 10 262 5 270 5.07e-23 95.5
Msa0942730 AT2G47150.1 29.918 244 120 7 19 261 1 194 6.06e-22 90.9
Msa0942730 AT5G18210.1 29.278 263 157 6 19 262 8 260 6.43e-22 92.4
Msa0942730 AT4G13180.1 27.737 274 168 8 7 262 1 262 5.71e-20 87.0
Msa0942730 AT5G18210.2 30.488 246 142 6 19 245 8 243 7.73e-20 87.0
Msa0942730 AT1G54870.2 29.817 218 132 6 1 203 67 278 9.00e-20 87.8
Msa0942730 AT1G54870.1 29.817 218 132 6 1 203 65 276 1.00e-19 87.4
Msa0942730 AT3G04000.1 29.151 271 164 6 10 259 5 268 1.14e-19 86.3
Msa0942730 AT3G05260.1 28.000 275 171 9 1 259 20 283 2.55e-19 85.9
Msa0942730 AT1G24360.1 27.126 247 157 8 25 259 80 315 4.19e-17 80.1
Msa0942730 AT2G29340.2 29.845 258 159 8 14 259 2 249 1.28e-16 77.8
Msa0942730 AT2G29340.1 29.845 258 159 8 14 259 2 249 1.47e-16 78.2
Msa0942730 AT2G29150.1 30.566 265 147 10 14 259 11 257 2.41e-16 77.0
Msa0942730 AT5G06060.1 28.044 271 153 9 13 261 3 253 5.47e-15 73.2
Msa0942730 AT2G29310.1 29.231 260 162 10 14 261 2 251 1.48e-14 72.0
Msa0942730 AT1G07450.1 29.885 261 156 11 15 261 4 251 2.90e-14 71.2
Msa0942730 AT2G29340.3 30.198 202 124 6 14 204 2 197 5.88e-14 69.3
Msa0942730 AT2G29340.4 30.198 202 124 6 14 204 2 197 5.88e-14 69.3
Msa0942730 AT2G30670.1 26.172 256 171 6 14 259 2 249 8.74e-14 69.7
Msa0942730 AT2G29330.1 28.516 256 165 8 14 259 2 249 1.19e-13 69.3
Msa0942730 AT1G62610.3 26.054 261 161 9 19 258 15 264 1.87e-12 66.2
Msa0942730 AT1G62610.1 26.054 261 161 9 19 258 14 263 1.96e-12 66.2
Msa0942730 AT1G62610.2 26.054 261 161 9 19 258 13 262 2.27e-12 65.9
Msa0942730 AT1G62610.4 26.054 261 161 9 19 258 19 268 2.53e-12 65.9
Msa0942730 AT2G29300.1 29.434 265 152 12 14 259 2 250 3.94e-12 65.1
Msa0942730 AT1G63380.1 26.718 262 158 10 19 258 17 266 4.25e-12 65.5
Msa0942730 AT1G63380.2 26.718 262 158 10 19 258 22 271 4.38e-12 65.5
Msa0942730 AT1G63380.3 26.718 262 158 10 19 258 15 264 4.39e-12 65.1
Msa0942730 AT1G63380.4 26.718 262 158 10 19 258 19 268 4.76e-12 65.1
Msa0942730 AT2G29300.2 29.434 265 152 12 14 259 2 250 5.02e-12 65.1
Msa0942730 AT2G29290.2 27.132 258 166 7 14 259 2 249 6.90e-12 64.3
Msa0942730 AT2G29350.2 30.198 202 124 8 14 204 10 205 1.20e-11 63.2
Msa0942730 AT2G29260.1 27.692 260 152 8 19 259 68 310 8.29e-11 62.0

Find 141 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTCGAAGCACACAATAAT+AGG 0.203487 6_3:-18043903 Msa0942730:CDS
ATGTCGAAGCACGCGATAAT+AGG 0.212241 6_3:-18048818 Msa0942730:five_prime_UTR
CATTCACTAACAACAATCTT+AGG 0.241211 6_3:-18044668 Msa0942730:CDS
AACTTGCAAAGCATGGAATA+AGG 0.289760 6_3:-18048772 Msa0942730:five_prime_UTR
ATACAAGAAATAAATGTAAT+TGG 0.305748 6_3:-18043484 Msa0942730:three_prime_UTR
GTGGATGGTAGCTATGTTTC+TGG 0.306811 6_3:-18043636 Msa0942730:CDS
GGCAGATGTTGTGTTGTTCT+TGG 0.310168 6_3:-18043700 Msa0942730:CDS
GGCAGATGCTGTGTTGTTCT+TGG 0.317529 6_3:-18048615 Msa0942730:five_prime_UTR
TTAATTAAAGAAGAATGTTT+AGG 0.327136 6_3:+18048482 None:intergenic
GTGCACCCCATTGATATAAA+AGG 0.327729 6_3:-18049623 Msa0942730:five_prime_UTR
GATATTATGTTTAGTAATGC+TGG 0.328463 6_3:-18044128 Msa0942730:CDS
CACCATACGTGCACCTTGTT+CGG 0.329714 6_3:+18049461 None:intergenic
CAATCAACGGTCAATACTTA+TGG 0.333742 6_3:-18049321 Msa0942730:five_prime_UTR
CGTCTCTTTGCCGATGCCGC+TGG 0.343665 6_3:+18049497 None:intergenic
CACTCACTAACAGCAGTCTT+AGG 0.352793 6_3:-18049554 Msa0942730:five_prime_UTR
TTACACCTCTAAGAAGTGTT+AGG 0.354863 6_3:+18048424 None:intergenic
GATATTATGTTTAGCAATGC+TGG 0.362324 6_3:-18049043 Msa0942730:five_prime_UTR
GTGCTTCGACATTATGTAAT+CGG 0.363259 6_3:+18043914 None:intergenic
GCCAATGCCGCTGGCACCTC+CGG 0.364087 6_3:+18044620 None:intergenic
ACTGTCTTTGCACCTGCATC+TGG 0.367733 6_3:+18043783 None:intergenic
CTTCATTGCCCAACTCATCT+TGG 0.372263 6_3:+18049424 None:intergenic
TACCATGCGTGCACCTTGTT+CGG 0.374809 6_3:+18044575 None:intergenic
GCCGATGCCGCTGGCACCTC+CGG 0.378274 6_3:+18049506 None:intergenic
AAATTCCTAACACTTCTTAG+AGG 0.387376 6_3:-18048429 Msa0942730:five_prime_UTR
AATGAAGTGGCTGCATCTAT+TGG 0.402249 6_3:-18049408 Msa0942730:five_prime_UTR
CGTCTCTTTGCCAATGCCGC+TGG 0.405832 6_3:+18044611 None:intergenic
ATACTTCAACTAGAAGTGTT+AGG 0.406698 6_3:+18043526 None:intergenic
CAATGGTGGGCGGGTGCGTG+AGG 0.413017 6_3:-18043992 Msa0942730:CDS
AATGGTGGGCGGGTGCGTGA+GGG 0.425544 6_3:-18043991 Msa0942730:CDS
ACCGGAGGTGCCAGCGGCAT+TGG 0.425693 6_3:-18044621 Msa0942730:CDS
TGTCGAAGCACGCGATAATA+GGG 0.426974 6_3:-18048817 Msa0942730:five_prime_UTR
AGTGACAAAGTCAGATTCAT+TGG 0.438975 6_3:+18048589 None:intergenic
CTTGATTGCCCAACTCGACT+TGG 0.440529 6_3:+18044538 None:intergenic
AACTTGCAAAGCATGGGATA+AGG 0.445636 6_3:-18043857 Msa0942730:CDS
ACCGGAGGTGCCAGCGGCAT+CGG 0.446928 6_3:-18049507 Msa0942730:five_prime_UTR
AACAACAATCTTAGGTTAGC+AGG 0.450218 6_3:-18044660 Msa0942730:CDS
CGGCACGTGCAATGGTGGGC+GGG 0.451916 6_3:-18044001 Msa0942730:CDS
GAACGTTAACTGAGAACAAA+TGG 0.454425 6_3:+18048966 None:intergenic
TTGTTCTCAGTTAACGTTCG+AGG 0.458461 6_3:-18048962 Msa0942730:five_prime_UTR
TTGTTCTCAGTTAACATTCG+AGG 0.461567 6_3:-18044047 Msa0942730:CDS
GTGAATTGTGTCTCACCAAA+TGG 0.465319 6_3:-18048749 Msa0942730:five_prime_UTR
CTGCATCCATTGGCGGCCAT+AGG 0.466896 6_3:-18044512 Msa0942730:CDS
CGCTGACATCCAAGTCGAGT+TGG 0.467554 6_3:-18044547 Msa0942730:CDS
TGTCGAAGCACACAATAATA+GGG 0.467991 6_3:-18043902 Msa0942730:CDS
GTGGATGGTAGCTTTCTTGA+TGG 0.469944 6_3:-18048551 Msa0942730:five_prime_UTR
CTGCATCTATTGGCAGCCAC+AGG 0.470696 6_3:-18049398 Msa0942730:five_prime_UTR
GTGTGCACGGCTAGCGTCGC+CGG 0.471191 6_3:-18043960 Msa0942730:CDS
GTGTGCACGGCTAGCGTCGC+CGG 0.471191 6_3:-18048875 Msa0942730:five_prime_UTR
AATCAAGTGGCTGCATCCAT+TGG 0.471481 6_3:-18044522 Msa0942730:CDS
GAATGTTAACTGAGAACAAA+TGG 0.474911 6_3:+18044051 None:intergenic
TTTGTATTGAATTTATTTGA+AGG 0.474915 6_3:-18048457 Msa0942730:five_prime_UTR
GTGAATTGTGTATCACCAAA+TGG 0.474979 6_3:-18043834 Msa0942730:CDS
CGCCGACATCCAAGATGAGT+TGG 0.475014 6_3:-18049433 Msa0942730:five_prime_UTR
CTCAGTTAACGTTCGAGGAA+TGG 0.475650 6_3:-18048957 Msa0942730:five_prime_UTR
GGAGAATACAAGAGGTTGGA+AGG 0.477377 6_3:-18043747 Msa0942730:CDS
GGAGAATACAAGAGGTTGGA+AGG 0.477377 6_3:-18048662 Msa0942730:five_prime_UTR
GGCAAAACAGCCATCGTCAC+CGG 0.479207 6_3:-18044639 Msa0942730:CDS
CTCAGTTAACATTCGAGGAA+TGG 0.485569 6_3:-18044042 Msa0942730:CDS
ACTTGCAAAGCATGGAATAA+GGG 0.486045 6_3:-18048771 Msa0942730:five_prime_UTR
AATGAATGTAGGTGCACCTA+TGG 0.488237 6_3:+18044496 None:intergenic
TCCAACACAGTTTGATCAGA+TGG 0.488434 6_3:+18044095 None:intergenic
AACAGCAGTCTTAGGTTAGC+AGG 0.489763 6_3:-18049546 Msa0942730:five_prime_UTR
TTGTATTGAATTTATTTGAA+GGG 0.491819 6_3:-18048456 Msa0942730:five_prime_UTR
ACTTGCAAAGCATGGGATAA+GGG 0.492055 6_3:-18043856 Msa0942730:CDS
TCTAGCAATTTCATAGTCAA+TGG 0.495865 6_3:+18048716 None:intergenic
AATGGTGTTGCTAATCCATT+TGG 0.497446 6_3:+18043819 None:intergenic
ATGGTGGGCGGGTGCGTGAG+GGG 0.498110 6_3:-18043990 Msa0942730:CDS
GGCCTTGATCTTCGTGTGGA+TGG 0.499300 6_3:-18043651 Msa0942730:CDS
GGCCTTGATCTTCGTGTGGA+TGG 0.499300 6_3:-18048566 Msa0942730:five_prime_UTR
GCTGACATCCAAGTCGAGTT+GGG 0.504241 6_3:-18044546 Msa0942730:CDS
AATAATAGGGTTGATGCGTT+CGG 0.506821 6_3:-18043889 Msa0942730:CDS
GAAACATGCGGCGCGTGCGA+TGG 0.507406 6_3:-18048924 Msa0942730:five_prime_UTR
ATATTATGTTTAGTAATGCT+GGG 0.508057 6_3:-18044127 Msa0942730:CDS
AATGGTGTTGCTAATCCATT+TGG 0.510778 6_3:+18048734 None:intergenic
ATATTATGTTTAGCAATGCT+GGG 0.517928 6_3:-18049042 Msa0942730:five_prime_UTR
TCCAACACAGTCTGATCAGA+TGG 0.518322 6_3:+18049010 None:intergenic
GGCAAAATAGCCATTGTCAC+CGG 0.521032 6_3:-18049525 Msa0942730:five_prime_UTR
ATGGTGGACGGTTGCGTGAG+GGG 0.522782 6_3:-18048905 Msa0942730:five_prime_UTR
AACGGTCAATACTTATGGAC+AGG 0.523815 6_3:-18049316 Msa0942730:intron
GAGGGGTAGCATTGTGTGCA+CGG 0.524508 6_3:-18043973 Msa0942730:CDS
GAGGGGTAGCATTGTGTGCA+CGG 0.524508 6_3:-18048888 Msa0942730:five_prime_UTR
TGCCGAACAAGGTGCACGTA+TGG 0.526292 6_3:-18049463 Msa0942730:five_prime_UTR
GCGGCACGTGCAATGGTGGG+CGG 0.528253 6_3:-18044002 Msa0942730:CDS
AATGAATCTGACTTTGTCAC+TGG 0.530339 6_3:-18048587 Msa0942730:five_prime_UTR
GCGCATGTCTTTGCCGAACA+AGG 0.531534 6_3:-18049474 Msa0942730:five_prime_UTR
AGTAAGCAACTTGCAAAGCA+TGG 0.531560 6_3:-18048779 Msa0942730:five_prime_UTR
AATGAATCTGACTTTGTCAC+TGG 0.533236 6_3:-18043672 Msa0942730:CDS
AGTGTGCAACTTGCAAAGCA+TGG 0.534452 6_3:-18043864 Msa0942730:CDS
GCCGACATCCAAGATGAGTT+GGG 0.536561 6_3:-18049432 Msa0942730:five_prime_UTR
GTGCATGTCTTTGCCGAACA+AGG 0.540817 6_3:-18044588 Msa0942730:CDS
CTTCATGCTACCGTTGCTAC+CGG 0.541833 6_3:+18048856 None:intergenic
CTTCACGCCACCATGGCTAC+CGG 0.543196 6_3:+18043941 None:intergenic
GCTGGCACCTCCGGTGACAA+TGG 0.548752 6_3:+18049515 None:intergenic
ACATGCGGCACGTGCAATGG+TGG 0.550445 6_3:-18044006 Msa0942730:CDS
TCCATCTGATCAAACTGTGT+TGG 0.550969 6_3:-18044096 Msa0942730:CDS
GCTGGCACCTCCGGTGACGA+TGG 0.551983 6_3:+18044629 None:intergenic
CAGCGGCATTGGCAAAGAGA+CGG 0.557214 6_3:-18044610 Msa0942730:CDS
GCTAGCGTCGCCGGTAGCCA+TGG 0.557609 6_3:-18043951 Msa0942730:CDS
GATGGTGGACGGTTGCGTGA+GGG 0.557625 6_3:-18048906 Msa0942730:five_prime_UTR
TACCATCCACACGAAGATCA+AGG 0.559297 6_3:+18043649 None:intergenic
TACCATCCACACGAAGATCA+AGG 0.559297 6_3:+18048564 None:intergenic
ACATGTAAATTGCCAGATGC+AGG 0.559452 6_3:-18043795 Msa0942730:CDS
CACTGGCCTTGATCTTCGTG+TGG 0.560496 6_3:-18043655 Msa0942730:CDS
CACTGGCCTTGATCTTCGTG+TGG 0.560496 6_3:-18048570 Msa0942730:five_prime_UTR
ACATGCGGCGCGTGCGATGG+TGG 0.561353 6_3:-18048921 Msa0942730:five_prime_UTR
ATACAAGAGGTTGGAAGGAG+TGG 0.561860 6_3:-18043742 Msa0942730:CDS
ATACAAGAGGTTGGAAGGAG+TGG 0.561860 6_3:-18048657 Msa0942730:five_prime_UTR
CATGCGGCACGTGCAATGGT+GGG 0.564443 6_3:-18044005 Msa0942730:CDS
CAAGTGGCTGCATCCATTGG+CGG 0.565708 6_3:-18044519 Msa0942730:CDS
CGATGGTGGACGGTTGCGTG+AGG 0.569245 6_3:-18048907 Msa0942730:five_prime_UTR
GTTGAAGTATTAGAGATGTA+CGG 0.569807 6_3:-18043513 Msa0942730:three_prime_UTR
TGCCGAACAAGGTGCACGCA+TGG 0.572240 6_3:-18044577 Msa0942730:CDS
GTGTGCAACTTGCAAAGCAT+GGG 0.574953 6_3:-18043863 Msa0942730:CDS
CGAACAAGGTGCACGTATGG+TGG 0.575204 6_3:-18049460 Msa0942730:five_prime_UTR
GAAACATGCGGCACGTGCAA+TGG 0.575721 6_3:-18044009 Msa0942730:CDS
GCCCAACTCATCTTGGATGT+CGG 0.577520 6_3:+18049431 None:intergenic
ATTGATATAAAAGGCTAGCA+TGG 0.578042 6_3:-18049614 Msa0942730:five_prime_UTR
TCCATCTGATCAGACTGTGT+TGG 0.587052 6_3:-18049011 Msa0942730:five_prime_UTR
ACTATGAAATTGCTAGATGC+AGG 0.589183 6_3:-18048710 Msa0942730:five_prime_UTR
ATCGTCACCGGAGGTGCCAG+CGG 0.590387 6_3:-18044627 Msa0942730:CDS
ATTGTCACCGGAGGTGCCAG+CGG 0.592750 6_3:-18049513 Msa0942730:five_prime_UTR
TATTCTAGACCACACGTCAT+CGG 0.593982 6_3:-18049655 None:intergenic
TCTGGCAATTTACATGTCAA+TGG 0.594870 6_3:+18043801 None:intergenic
GCGGCGCGTGCGATGGTGGA+CGG 0.599914 6_3:-18048917 Msa0942730:five_prime_UTR
GGTGCACCTATGGCCGCCAA+TGG 0.609676 6_3:+18044506 None:intergenic
GCTAGCGTCGCCGGTAGCAA+CGG 0.610358 6_3:-18048866 Msa0942730:five_prime_UTR
AGTCGAGTTGGGCAATCAAG+TGG 0.612217 6_3:-18044535 Msa0942730:CDS
TGCTACGTCACAATGAATGT+AGG 0.613289 6_3:+18044485 None:intergenic
CGCTACGTCACAATGAACAT+AGG 0.625490 6_3:+18049371 None:intergenic
CAGCGGCATCGGCAAAGAGA+CGG 0.625686 6_3:-18049496 Msa0942730:five_prime_UTR
AGCGTCGCCGGTAGCCATGG+TGG 0.632739 6_3:-18043948 Msa0942730:CDS
AGATGAGTTGGGCAATGAAG+TGG 0.652574 6_3:-18049421 Msa0942730:five_prime_UTR
CGGTTAACTTCACGCCACCA+TGG 0.654241 6_3:+18043934 None:intergenic
GGCATTGTGCGTGAAACATG+CGG 0.656257 6_3:-18048936 Msa0942730:five_prime_UTR
AAAACAGCCATCGTCACCGG+AGG 0.659068 6_3:-18044636 Msa0942730:CDS
TCTTAGAGGTGTAAAGAGTG+AGG 0.671910 6_3:-18048415 Msa0942730:five_prime_UTR
GGTTCTCAGCACTAAACATG+TGG 0.675466 6_3:-18048636 Msa0942730:five_prime_UTR
AAAATAGCCATTGTCACCGG+AGG 0.684966 6_3:-18049522 Msa0942730:five_prime_UTR
GGCATTGTGCGTGAAACATG+CGG 0.685563 6_3:-18044021 Msa0942730:CDS
GGTTCTCAACACTAAACATG+TGG 0.686817 6_3:-18043721 Msa0942730:CDS
AATGAACATAGGTGCACCTG+TGG 0.691741 6_3:+18049382 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTATAAATTTTATTAA+TGG + chr6_3:18048218-18048237 None:intergenic 0.0%
!!! ATATTTAAAATAATCAAACA+TGG + chr6_3:18044778-18044797 None:intergenic 10.0%
!! TTCAAGATTAAATTTAAAAA+GGG + chr6_3:18045817-18045836 None:intergenic 10.0%
!! TTTCAAGATTAAATTTAAAA+AGG + chr6_3:18045818-18045837 None:intergenic 10.0%
!! AAACAATATTATAGATTAAT+TGG - chr6_3:18046082-18046101 Msa0942730:intron 10.0%
!! AACAATATTATAGATTAATT+GGG - chr6_3:18046083-18046102 Msa0942730:intron 10.0%
!!! GTGATTTTTTTTTTTTTTTA+TGG - chr6_3:18047462-18047481 Msa0942730:intron 10.0%
!! TAAATGTTGAATTAATATTT+CGG - chr6_3:18047744-18047763 Msa0942730:intron 10.0%
!! TATAATAAAAATTTAGTTGA+AGG + chr6_3:18047898-18047917 None:intergenic 10.0%
!!! AGAATAAAATTTCTTATTTT+CGG - chr6_3:18048011-18048030 Msa0942730:intron 10.0%
!!! TTTTTATACATTAACAAAAA+TGG - chr6_3:18048403-18048422 Msa0942730:five_prime_UTR 10.0%
!!! TTTTTGTTATGTATAAAAAG+TGG + chr6_3:18043517-18043536 None:intergenic 15.0%
!!! CTTTTTATACATAACAAAAA+TGG - chr6_3:18043517-18043536 Msa0942730:three_prime_UTR 15.0%
!! TTAATTAAAGAAGAATGTTT+AGG + chr6_3:18044624-18044643 None:intergenic 15.0%
!! TTTGTATTGAATTTATTTGA+AGG - chr6_3:18044646-18044665 Msa0942730:CDS 15.0%
!! TTGTATTGAATTTATTTGAA+GGG - chr6_3:18044647-18044666 Msa0942730:CDS 15.0%
!!! TAGATGTAATTTTTTATGTT+AGG - chr6_3:18044829-18044848 Msa0942730:intron 15.0%
!! GAGAAATATAATATTTAAAG+TGG - chr6_3:18045131-18045150 Msa0942730:intron 15.0%
!! AAAAACTATGTTAAAGAATT+TGG - chr6_3:18045245-18045264 Msa0942730:intron 15.0%
!! TATATACTCAAGAAATTTAT+TGG - chr6_3:18045850-18045869 Msa0942730:intron 15.0%
!!! GTTTTTTTTTTTTTTTGACA+AGG - chr6_3:18047389-18047408 Msa0942730:intron 15.0%
!! AAAATATTGAATTGATATTC+TGG - chr6_3:18047669-18047688 Msa0942730:intron 15.0%
!!! GAATAAAATTTCTTATTTTC+GGG - chr6_3:18048012-18048031 Msa0942730:intron 15.0%
!!! AATAAAATTTCTTATTTTCG+GGG - chr6_3:18048013-18048032 Msa0942730:intron 15.0%
!! TCAAAAATAAGATTTCTATA+AGG - chr6_3:18048108-18048127 Msa0942730:intron 15.0%
!! CAAAAATAAGATTTCTATAA+GGG - chr6_3:18048109-18048128 Msa0942730:intron 15.0%
!!! TTTTGTTAATGTATAAAAAG+TGG + chr6_3:18048402-18048421 None:intergenic 15.0%
!! ATACAAGAAATAAATGTAAT+TGG - chr6_3:18049619-18049638 Msa0942730:five_prime_UTR 15.0%
!! CATAACATATTATCTATCTT+TGG + chr6_3:18043992-18044011 None:intergenic 20.0%
!! AATTACAATTATGACAAAAG+AGG + chr6_3:18044968-18044987 None:intergenic 20.0%
!!! AGTTTTTTTCTTTAACATCT+TGG + chr6_3:18045232-18045251 None:intergenic 20.0%
!!! ATGTTAAAGAATTTGGTTTT+TGG - chr6_3:18045252-18045271 Msa0942730:intron 20.0%
!!! TATTTTGTCTTACATAGTTT+TGG + chr6_3:18045394-18045413 None:intergenic 20.0%
!! TTGTTTAATCCATAATATTC+TGG + chr6_3:18045937-18045956 None:intergenic 20.0%
!! GTATTTAAGCTGTTATAATA+AGG - chr6_3:18046013-18046032 Msa0942730:intron 20.0%
!!! ATTAAGCATTTGTTATATCA+AGG - chr6_3:18046123-18046142 Msa0942730:intron 20.0%
!! TAATGCAAATAATAAGAGAA+AGG - chr6_3:18046352-18046371 Msa0942730:intron 20.0%
!! GATAATTTATTAGTTGAGAT+AGG + chr6_3:18046985-18047004 None:intergenic 20.0%
!!! ATTTTAGGTTCAAATTCATT+AGG + chr6_3:18047026-18047045 None:intergenic 20.0%
!! AATTTGAACCTAAAATCTTA+GGG - chr6_3:18047030-18047049 Msa0942730:intron 20.0%
!! AACTGATTATCACTAAATAT+TGG - chr6_3:18047073-18047092 Msa0942730:intron 20.0%
!! TTTGGTATTATTACTAGAAA+TGG + chr6_3:18047179-18047198 None:intergenic 20.0%
!!! AAAAAACTTCTCTTTTTTCA+CGG + chr6_3:18047376-18047395 None:intergenic 20.0%
!!! ATGTTTGATTTCATTTTTGT+AGG - chr6_3:18047629-18047648 Msa0942730:intron 20.0%
!!! ATTCTATAACTTCTTTTGAT+AGG - chr6_3:18047982-18048001 Msa0942730:intron 20.0%
!! GCAATATATGATTTAAATGT+AGG + chr6_3:18048068-18048087 None:intergenic 20.0%
!!! TAAACATGTACTACTATTTT+TGG - chr6_3:18048236-18048255 Msa0942730:intron 20.0%
!! ATATTATGTTTAGTAATGCT+GGG - chr6_3:18048976-18048995 Msa0942730:five_prime_UTR 20.0%
! TTGTTTAGACAAATGATTCA+TGG - chr6_3:18043919-18043938 Msa0942730:CDS 25.0%
!!! ACTTATTTTTTTTCCACAAC+AGG - chr6_3:18044035-18044054 Msa0942730:CDS 25.0%
! ATATTATGTTTAGCAATGCT+GGG - chr6_3:18044061-18044080 Msa0942730:CDS 25.0%
! AGAGGTCATGTAATAATATA+TGG + chr6_3:18044950-18044969 None:intergenic 25.0%
! TTTAGAGATTCCAAAATTAG+AGG - chr6_3:18044991-18045010 Msa0942730:intron 25.0%
!!! TTTAGGAGGCTTTAAATTAA+TGG - chr6_3:18045071-18045090 Msa0942730:intron 25.0%
! TGGACAATATCATACATATT+TGG - chr6_3:18045091-18045110 Msa0942730:intron 25.0%
! AACTGAAGGAACAAAATAAT+TGG - chr6_3:18045486-18045505 Msa0942730:intron 25.0%
! AAGGAACAAAATAATTGGAT+AGG - chr6_3:18045491-18045510 Msa0942730:intron 25.0%
! CTCAAGAAATTTATTGGTAA+AGG - chr6_3:18045856-18045875 Msa0942730:intron 25.0%
! TATCAATGACCAGAATATTA+TGG - chr6_3:18045925-18045944 Msa0942730:intron 25.0%
!!! TTTATAAGCGTCTTTTAACT+AGG - chr6_3:18045959-18045978 Msa0942730:intron 25.0%
!! AATTTAGAACCAAATAACTC+TGG - chr6_3:18046187-18046206 Msa0942730:intron 25.0%
! CAAATTAATCCAGAGTTATT+TGG + chr6_3:18046199-18046218 None:intergenic 25.0%
! CAAATAACTCTGGATTAATT+TGG - chr6_3:18046197-18046216 Msa0942730:intron 25.0%
! TAATTAAGACCAAAATGTTC+TGG - chr6_3:18046227-18046246 Msa0942730:intron 25.0%
!! TTAATCTATCCAGAACATTT+TGG + chr6_3:18046239-18046258 None:intergenic 25.0%
! TATTCCAACACTTATAATCT+TGG + chr6_3:18046662-18046681 None:intergenic 25.0%
! AACTAAAAACTCTAGCAAAA+AGG + chr6_3:18046769-18046788 None:intergenic 25.0%
!!! TTTTCATTATTTGTTGTCTC+AGG - chr6_3:18046811-18046830 Msa0942730:intron 25.0%
! GAATTTGAACCTAAAATCTT+AGG - chr6_3:18047029-18047048 Msa0942730:intron 25.0%
! AAAAGCAAATGATACGTAAT+TGG - chr6_3:18047153-18047172 Msa0942730:intron 25.0%
! AAGATACCATTAATCATTGT+CGG + chr6_3:18047299-18047318 None:intergenic 25.0%
! ACAATGATTAATGGTATCTT+TGG - chr6_3:18047299-18047318 Msa0942730:intron 25.0%
! CTTGATCATTGTAGATAATA+GGG + chr6_3:18048307-18048326 None:intergenic 25.0%
! CACAAATGATTCATGATATT+AGG - chr6_3:18048808-18048827 Msa0942730:five_prime_UTR 25.0%
! GATATTATGTTTAGTAATGC+TGG - chr6_3:18048975-18048994 Msa0942730:five_prime_UTR 25.0%
!!! AAGACAGTTGATTTGATTTT+TGG - chr6_3:18049335-18049354 Msa0942730:five_prime_UTR 25.0%
!!! TGCTAGCCTTTTATATCAAT+GGG + chr6_3:18043489-18043508 None:intergenic 30.0%
!!! ATGCTAGCCTTTTATATCAA+TGG + chr6_3:18043490-18043509 None:intergenic 30.0%
ATTGATATAAAAGGCTAGCA+TGG - chr6_3:18043489-18043508 Msa0942730:three_prime_UTR 30.0%
CAAAAATCTCGTTCAATCAA+CGG - chr6_3:18043769-18043788 Msa0942730:CDS 30.0%
GGACAGGTAAATAATAACTA+AGG - chr6_3:18043803-18043822 Msa0942730:CDS 30.0%
AACATAATATCTACCTGTTG+TGG + chr6_3:18044051-18044070 None:intergenic 30.0%
GATATTATGTTTAGCAATGC+TGG - chr6_3:18044060-18044079 Msa0942730:CDS 30.0%
TCTAGCAATTTCATAGTCAA+TGG + chr6_3:18044390-18044409 None:intergenic 30.0%
!!! GAGACAGTTGATTTGATTTT+TGG - chr6_3:18044420-18044439 Msa0942730:intron 30.0%
!! TGATTTTTGGAGAATACAAG+AGG - chr6_3:18044433-18044452 Msa0942730:intron 30.0%
AAATTCCTAACACTTCTTAG+AGG - chr6_3:18044674-18044693 Msa0942730:CDS 30.0%
! TAAATTGTTTCTTCTAGTGC+AGG - chr6_3:18044884-18044903 Msa0942730:intron 30.0%
!! AGATTTAGAGCCTCTAATTT+TGG + chr6_3:18045004-18045023 None:intergenic 30.0%
!! AAAATTAGAGGCTCTAAATC+TGG - chr6_3:18045003-18045022 Msa0942730:intron 30.0%
GAGATTGAGAACTCTAATTT+AGG - chr6_3:18045054-18045073 Msa0942730:intron 30.0%
ATTGAGAACTCTAATTTAGG+AGG - chr6_3:18045057-18045076 Msa0942730:intron 30.0%
TTATCTGTCGAAGTTATTAC+TGG - chr6_3:18045328-18045347 Msa0942730:intron 30.0%
!! TTTTGTTCCTTCAGTTTTGT+AGG + chr6_3:18045482-18045501 None:intergenic 30.0%
ACAAAATAATTGGATAGGTG+TGG - chr6_3:18045496-18045515 Msa0942730:intron 30.0%
ATGTTGAACATACAAGAACT+AGG - chr6_3:18045692-18045711 Msa0942730:intron 30.0%
TGTTGAACATACAAGAACTA+GGG - chr6_3:18045693-18045712 Msa0942730:intron 30.0%
AATTATTCTCCAGAACATTC+TGG + chr6_3:18046040-18046059 None:intergenic 30.0%
TATCAAGGACCATAATGTTA+TGG - chr6_3:18046138-18046157 Msa0942730:intron 30.0%
TAACTGCATCCATAACATTA+TGG + chr6_3:18046150-18046169 None:intergenic 30.0%
TTATCCTAGTTCATCAAAGA+CGG - chr6_3:18046398-18046417 Msa0942730:intron 30.0%
TTTCTGATAGCTGGATATTA+TGG + chr6_3:18046461-18046480 None:intergenic 30.0%
TTGCCTATGTATGAGAAATT+TGG - chr6_3:18046623-18046642 Msa0942730:intron 30.0%
CATCCAAATTTCTCATACAT+AGG + chr6_3:18046629-18046648 None:intergenic 30.0%
CAACACTTATAATCTTGGTT+GGG + chr6_3:18046657-18046676 None:intergenic 30.0%
AAAAACTCTAGCAAAAAGGT+TGG + chr6_3:18046765-18046784 None:intergenic 30.0%
TAACAATGAAAACCAAACGA+TGG + chr6_3:18046854-18046873 None:intergenic 30.0%
!! TTCTCGTTGATTTAATCAAG+TGG - chr6_3:18046880-18046899 Msa0942730:intron 30.0%
! ACATACAACCCTAAGATTTT+AGG + chr6_3:18047041-18047060 None:intergenic 30.0%
!! CAGACATTTTTCTCTTGTTT+TGG + chr6_3:18047197-18047216 None:intergenic 30.0%
! GCACGTTTGTATTTTTCTTT+TGG - chr6_3:18047240-18047259 Msa0942730:intron 30.0%
ATTCAACCGACAATGATTAA+TGG - chr6_3:18047290-18047309 Msa0942730:intron 30.0%
GATTAATGGTATCTTTGGTT+TGG - chr6_3:18047304-18047323 Msa0942730:intron 30.0%
! AAGGTCTAGAGTTTAAACTT+CGG + chr6_3:18047491-18047510 None:intergenic 30.0%
TCGATATCTAACTTAATGAC+TGG - chr6_3:18048157-18048176 Msa0942730:intron 30.0%
! TCAAAACTTCGATTTGAACA+CGG + chr6_3:18048271-18048290 None:intergenic 30.0%
CCTTGATCATTGTAGATAAT+AGG + chr6_3:18048308-18048327 None:intergenic 30.0%
CCTATTATCTACAATGATCA+AGG - chr6_3:18048305-18048324 Msa0942730:intron 30.0%
TGAAGTGCACTAGATTTAAT+TGG + chr6_3:18048355-18048374 None:intergenic 30.0%
ATGAATATAAAACGCTAGCA+TGG - chr6_3:18048374-18048393 Msa0942730:exon 30.0%
CATTCACTAACAACAATCTT+AGG - chr6_3:18048435-18048454 Msa0942730:five_prime_UTR 30.0%
GAATGTTAACTGAGAACAAA+TGG + chr6_3:18049055-18049074 None:intergenic 30.0%
!! TGATTTTTGGAGAATACAAG+AGG - chr6_3:18044433-18044452 Msa0942730:intron 30.0%
!! ATACTTCAACTAGAAGTGTT+AGG + chr6_3:18049580-18049599 None:intergenic 30.0%
! GTTGAAGTATTAGAGATGTA+CGG - chr6_3:18049590-18049609 Msa0942730:five_prime_UTR 30.0%
!!! GCTAGCCTTTTATATCAATG+GGG + chr6_3:18043488-18043507 None:intergenic 35.0%
CAATCAACGGTCAATACTTA+TGG - chr6_3:18043782-18043801 Msa0942730:CDS 35.0%
GAACGTTAACTGAGAACAAA+TGG + chr6_3:18044140-18044159 None:intergenic 35.0%
AACTTGCAAAGCATGGAATA+AGG - chr6_3:18044331-18044350 Msa0942730:intron 35.0%
ACTTGCAAAGCATGGAATAA+GGG - chr6_3:18044332-18044351 Msa0942730:intron 35.0%
!! AATGGTGTTGCTAATCCATT+TGG + chr6_3:18044372-18044391 None:intergenic 35.0%
ACTATGAAATTGCTAGATGC+AGG - chr6_3:18044393-18044412 Msa0942730:intron 35.0%
!! TTTTGGAGAATACAAGAGGT+TGG - chr6_3:18044437-18044456 Msa0942730:intron 35.0%
AGTGACAAAGTCAGATTCAT+TGG + chr6_3:18044517-18044536 None:intergenic 35.0%
AATGAATCTGACTTTGTCAC+TGG - chr6_3:18044516-18044535 Msa0942730:CDS 35.0%
!! TTACACCTCTAAGAAGTGTT+AGG + chr6_3:18044682-18044701 None:intergenic 35.0%
ACCATATAAGCCATCATCAT+TGG - chr6_3:18044921-18044940 Msa0942730:intron 35.0%
TATATGGTTGCCAATGATGA+TGG + chr6_3:18044934-18044953 None:intergenic 35.0%
! TTTTGGACAGTGTCACAAAA+CGG + chr6_3:18045377-18045396 None:intergenic 35.0%
TTGAACTGATCAAATTGCTC+CGG + chr6_3:18045426-18045445 None:intergenic 35.0%
! AAACTAGCCTACAAAACTGA+AGG - chr6_3:18045472-18045491 Msa0942730:intron 35.0%
AAATAATTGGATAGGTGTGG+AGG - chr6_3:18045499-18045518 Msa0942730:intron 35.0%
AATAATTGGATAGGTGTGGA+GGG - chr6_3:18045500-18045519 Msa0942730:intron 35.0%
AATTAACGTCGCAAGAAAGA+AGG - chr6_3:18045777-18045796 Msa0942730:intron 35.0%
ATTAACGTCGCAAGAAAGAA+GGG - chr6_3:18045778-18045797 Msa0942730:intron 35.0%
!! TAACTAGGATCAGAGTGTTT+TGG - chr6_3:18045974-18045993 Msa0942730:intron 35.0%
TAATAAGGACCAGAATGTTC+TGG - chr6_3:18046028-18046047 Msa0942730:intron 35.0%
ATTCAGAAGTTTCTGATAGC+TGG + chr6_3:18046470-18046489 None:intergenic 35.0%
CAGAATGTTACAGACTGATA+TGG + chr6_3:18046516-18046535 None:intergenic 35.0%
CCAACACTTATAATCTTGGT+TGG + chr6_3:18046658-18046677 None:intergenic 35.0%
CCAACCAAGATTATAAGTGT+TGG - chr6_3:18046655-18046674 Msa0942730:intron 35.0%
AGTACATGTGAACCTTTACT+AGG + chr6_3:18046700-18046719 None:intergenic 35.0%
!! CGTTGATTTAATCAAGTGGT+TGG - chr6_3:18046884-18046903 Msa0942730:intron 35.0%
!!! TGTCCAAGTATGGTTTTAGT+CGG - chr6_3:18046908-18046927 Msa0942730:intron 35.0%
TAACCGACTAAAACCATACT+TGG + chr6_3:18046914-18046933 None:intergenic 35.0%
ATTGGCACCATTAAGAAACA+AGG - chr6_3:18047091-18047110 Msa0942730:intron 35.0%
! TCTTCGACCTTGTTTCTTAA+TGG + chr6_3:18047101-18047120 None:intergenic 35.0%
TACAAACGTGCAAAATTACG+TGG + chr6_3:18047231-18047250 None:intergenic 35.0%
ACCTTAAAGTTAATCTCACG+AGG - chr6_3:18047506-18047525 Msa0942730:intron 35.0%
TCCTCGTGAGATTAACTTTA+AGG + chr6_3:18047510-18047529 None:intergenic 35.0%
AATGGAACTAGCACGTTATT+GGG + chr6_3:18048200-18048219 None:intergenic 35.0%
TAATGGAACTAGCACGTTAT+TGG + chr6_3:18048201-18048220 None:intergenic 35.0%
!! TAGATTTAATTGGTGACGTG+TGG + chr6_3:18048345-18048364 None:intergenic 35.0%
AACAACAATCTTAGGTTAGC+AGG - chr6_3:18048443-18048462 Msa0942730:five_prime_UTR 35.0%
CAAAAATCTCGTTCAATCGA+CGG - chr6_3:18048655-18048674 Msa0942730:five_prime_UTR 35.0%
! ACTTCTTTCTTTTCTGCAAC+AGG - chr6_3:18048950-18048969 Msa0942730:five_prime_UTR 35.0%
TTGTTCTCAGTTAACATTCG+AGG - chr6_3:18049056-18049075 Msa0942730:intron 35.0%
GTGCTTCGACATTATGTAAT+CGG + chr6_3:18049192-18049211 None:intergenic 35.0%
ATGTCGAAGCACACAATAAT+AGG - chr6_3:18049200-18049219 Msa0942730:intron 35.0%
TGTCGAAGCACACAATAATA+GGG - chr6_3:18049201-18049220 Msa0942730:intron 35.0%
!! AATAATAGGGTTGATGCGTT+CGG - chr6_3:18049214-18049233 Msa0942730:intron 35.0%
GTGAATTGTGTATCACCAAA+TGG - chr6_3:18049269-18049288 Msa0942730:intron 35.0%
!! AATGGTGTTGCTAATCCATT+TGG + chr6_3:18044372-18044391 None:intergenic 35.0%
TCTGGCAATTTACATGTCAA+TGG + chr6_3:18049305-18049324 None:intergenic 35.0%
!! TTTTGGAGAATACAAGAGGT+TGG - chr6_3:18044437-18044456 Msa0942730:intron 35.0%
AATGAATCTGACTTTGTCAC+TGG - chr6_3:18044516-18044535 Msa0942730:CDS 35.0%
! TAGATTTTACCGATGACGTG+TGG + chr6_3:18043460-18043479 None:intergenic 40.0%
GTGCACCCCATTGATATAAA+AGG - chr6_3:18043480-18043499 Msa0942730:three_prime_UTR 40.0%
AATGAAGTGGCTGCATCTAT+TGG - chr6_3:18043695-18043714 Msa0942730:CDS 40.0%
AACGGTCAATACTTATGGAC+AGG - chr6_3:18043787-18043806 Msa0942730:CDS 40.0%
TTGTTCTCAGTTAACGTTCG+AGG - chr6_3:18044141-18044160 Msa0942730:intron 40.0%
AGTAAGCAACTTGCAAAGCA+TGG - chr6_3:18044324-18044343 Msa0942730:intron 40.0%
GTGAATTGTGTCTCACCAAA+TGG - chr6_3:18044354-18044373 Msa0942730:intron 40.0%
! TCTTAGAGGTGTAAAGAGTG+AGG - chr6_3:18044688-18044707 Msa0942730:intron 40.0%
!! GCCAATGATGATGGCTTATA+TGG + chr6_3:18044925-18044944 None:intergenic 40.0%
AGAACACGTTGCTTACATCT+AGG + chr6_3:18045191-18045210 None:intergenic 40.0%
! ATGGAAGGAAGTGTGATTGA+AGG + chr6_3:18045534-18045553 None:intergenic 40.0%
ACATACAAGAACTAGGGTGA+AGG - chr6_3:18045699-18045718 Msa0942730:intron 40.0%
ACATGAGCGATGATTATGAC+AGG - chr6_3:18045734-18045753 Msa0942730:intron 40.0%
TTAACGTCGCAAGAAAGAAG+GGG - chr6_3:18045779-18045798 Msa0942730:intron 40.0%
CTGATAGCTGGATATTATGG+TGG + chr6_3:18046458-18046477 None:intergenic 40.0%
TGATGTTGAGTACCTTGAGA+TGG - chr6_3:18046569-18046588 Msa0942730:intron 40.0%
GATGTTGAGTACCTTGAGAT+GGG - chr6_3:18046570-18046589 Msa0942730:intron 40.0%
TAAGCATATCACCCATCTCA+AGG + chr6_3:18046584-18046603 None:intergenic 40.0%
GATGGGTGATATGCTTATGA+AGG - chr6_3:18046587-18046606 Msa0942730:intron 40.0%
GGTGATATGCTTATGAAGGT+TGG - chr6_3:18046591-18046610 Msa0942730:intron 40.0%
ATTTCTCTGCTGCCTAGTAA+AGG - chr6_3:18046685-18046704 Msa0942730:intron 40.0%
AAAAAGGTTGGATGCAAAGG+AGG + chr6_3:18046753-18046772 None:intergenic 40.0%
AGCAAAAAGGTTGGATGCAA+AGG + chr6_3:18046756-18046775 None:intergenic 40.0%
GTGTTATGTTCTCCATCGTT+TGG - chr6_3:18046839-18046858 Msa0942730:intron 40.0%
! TGTCGGTTGAATCATTACGT+GGG + chr6_3:18047282-18047301 None:intergenic 40.0%
! TTGTCGGTTGAATCATTACG+TGG + chr6_3:18047283-18047302 None:intergenic 40.0%
AATGAATGTAGGTGCACCTA+TGG + chr6_3:18048610-18048629 None:intergenic 40.0%
TGCTACGTCACAATGAATGT+AGG + chr6_3:18048621-18048640 None:intergenic 40.0%
CAATCGACGGTCAATACTTA+TGG - chr6_3:18048668-18048687 Msa0942730:five_prime_UTR 40.0%
TCCATCTGATCAAACTGTGT+TGG - chr6_3:18049007-18049026 Msa0942730:five_prime_UTR 40.0%
TCCAACACAGTTTGATCAGA+TGG + chr6_3:18049011-18049030 None:intergenic 40.0%
CTCAGTTAACATTCGAGGAA+TGG - chr6_3:18049061-18049080 Msa0942730:intron 40.0%
AACTTGCAAAGCATGGGATA+AGG - chr6_3:18049246-18049265 Msa0942730:intron 40.0%
ACTTGCAAAGCATGGGATAA+GGG - chr6_3:18049247-18049266 Msa0942730:intron 40.0%
ACATGTAAATTGCCAGATGC+AGG - chr6_3:18049308-18049327 Msa0942730:intron 40.0%
GGTTCTCAACACTAAACATG+TGG - chr6_3:18049382-18049401 Msa0942730:five_prime_UTR 40.0%
CACTCACTAACAGCAGTCTT+AGG - chr6_3:18043549-18043568 Msa0942730:three_prime_UTR 45.0%
AACAGCAGTCTTAGGTTAGC+AGG - chr6_3:18043557-18043576 Msa0942730:three_prime_UTR 45.0%
GGCAAAATAGCCATTGTCAC+CGG - chr6_3:18043578-18043597 Msa0942730:three_prime_UTR 45.0%
AAAATAGCCATTGTCACCGG+AGG - chr6_3:18043581-18043600 Msa0942730:three_prime_UTR 45.0%
CTTCATTGCCCAACTCATCT+TGG + chr6_3:18043682-18043701 None:intergenic 45.0%
! AGATGAGTTGGGCAATGAAG+TGG - chr6_3:18043682-18043701 Msa0942730:CDS 45.0%
AATGAACATAGGTGCACCTG+TGG + chr6_3:18043724-18043743 None:intergenic 45.0%
CGCTACGTCACAATGAACAT+AGG + chr6_3:18043735-18043754 None:intergenic 45.0%
TCCATCTGATCAGACTGTGT+TGG - chr6_3:18044092-18044111 Msa0942730:CDS 45.0%
TCCAACACAGTCTGATCAGA+TGG + chr6_3:18044096-18044115 None:intergenic 45.0%
CTCAGTTAACGTTCGAGGAA+TGG - chr6_3:18044146-18044165 Msa0942730:intron 45.0%
ATGTCGAAGCACGCGATAAT+AGG - chr6_3:18044285-18044304 Msa0942730:intron 45.0%
TGTCGAAGCACGCGATAATA+GGG - chr6_3:18044286-18044305 Msa0942730:intron 45.0%
GGAGAATACAAGAGGTTGGA+AGG - chr6_3:18044441-18044460 Msa0942730:intron 45.0%
ATACAAGAGGTTGGAAGGAG+TGG - chr6_3:18044446-18044465 Msa0942730:intron 45.0%
GGTTCTCAGCACTAAACATG+TGG - chr6_3:18044467-18044486 Msa0942730:CDS 45.0%
TACCATCCACACGAAGATCA+AGG + chr6_3:18044542-18044561 None:intergenic 45.0%
GTGGATGGTAGCTTTCTTGA+TGG - chr6_3:18044552-18044571 Msa0942730:CDS 45.0%
! TTACTGGTTGAGTCACGATC+AGG - chr6_3:18045344-18045363 Msa0942730:intron 45.0%
AGACAAAATACCAACCACGC+CGG - chr6_3:18045404-18045423 Msa0942730:intron 45.0%
! GAAGGAAGTGTGATTGAAGG+TGG + chr6_3:18045531-18045550 None:intergenic 45.0%
ACAAGAACTAGGGTGAAGGA+AGG - chr6_3:18045703-18045722 Msa0942730:intron 45.0%
CAAGAACTAGGGTGAAGGAA+GGG - chr6_3:18045704-18045723 Msa0942730:intron 45.0%
GTAGCCGTCTTTGATGAACT+AGG + chr6_3:18046405-18046424 None:intergenic 45.0%
GACAATCTCACACGAAGTGT+GGG + chr6_3:18046436-18046455 None:intergenic 45.0%
AAAGGAGGTGGCTCAACATT+CGG + chr6_3:18046738-18046757 None:intergenic 45.0%
!! TGGTATCTTTGGTTTGGCTG+TGG - chr6_3:18047310-18047329 Msa0942730:intron 45.0%
TACTCATTGAGATGTCAGCC+TGG + chr6_3:18047349-18047368 None:intergenic 45.0%
AATCAAGTGGCTGCATCCAT+TGG - chr6_3:18048581-18048600 Msa0942730:five_prime_UTR 45.0%
AGTGTGCAACTTGCAAAGCA+TGG - chr6_3:18049239-18049258 Msa0942730:intron 45.0%
GTGTGCAACTTGCAAAGCAT+GGG - chr6_3:18049240-18049259 Msa0942730:intron 45.0%
GGAGAATACAAGAGGTTGGA+AGG - chr6_3:18044441-18044460 Msa0942730:intron 45.0%
ATACAAGAGGTTGGAAGGAG+TGG - chr6_3:18044446-18044465 Msa0942730:intron 45.0%
! GGCAGATGTTGTGTTGTTCT+TGG - chr6_3:18049403-18049422 Msa0942730:five_prime_UTR 45.0%
TACCATCCACACGAAGATCA+AGG + chr6_3:18044542-18044561 None:intergenic 45.0%
GTGGATGGTAGCTATGTTTC+TGG - chr6_3:18049467-18049486 Msa0942730:five_prime_UTR 45.0%
!! TAAATTATCATAATATTAAA+TGG - chr6_3:18046996-18047015 Msa0942730:intron 5.0%
!!! ATTAACTAATTTTAAATATT+AGG - chr6_3:18048701-18048720 Msa0942730:five_prime_UTR 5.0%
CACCATACGTGCACCTTGTT+CGG + chr6_3:18043645-18043664 None:intergenic 50.0%
GCCGACATCCAAGATGAGTT+GGG - chr6_3:18043671-18043690 Msa0942730:CDS 50.0%
GCCCAACTCATCTTGGATGT+CGG + chr6_3:18043675-18043694 None:intergenic 50.0%
GGCATTGTGCGTGAAACATG+CGG - chr6_3:18044167-18044186 Msa0942730:intron 50.0%
CTTCATGCTACCGTTGCTAC+CGG + chr6_3:18044250-18044269 None:intergenic 50.0%
! GGCAGATGCTGTGTTGTTCT+TGG - chr6_3:18044488-18044507 Msa0942730:CDS 50.0%
GCATCACGCACAACCATGTA+GGG + chr6_3:18045670-18045689 None:intergenic 50.0%
AGCATCACGCACAACCATGT+AGG + chr6_3:18045671-18045690 None:intergenic 50.0%
TGTGTGTGTGTGTGTGTGTG+TGG - chr6_3:18046325-18046344 Msa0942730:intron 50.0%
GGACAATCTCACACGAAGTG+TGG + chr6_3:18046437-18046456 None:intergenic 50.0%
AAGGTTGGATGCAAAGGAGG+TGG + chr6_3:18046750-18046769 None:intergenic 50.0%
! AGTGGTTGGCTGTCCAAGTA+TGG - chr6_3:18046898-18046917 Msa0942730:intron 50.0%
GTGCATGTCTTTGCCGAACA+AGG - chr6_3:18048515-18048534 Msa0942730:five_prime_UTR 50.0%
TACCATGCGTGCACCTTGTT+CGG + chr6_3:18048531-18048550 None:intergenic 50.0%
GCTGACATCCAAGTCGAGTT+GGG - chr6_3:18048557-18048576 Msa0942730:five_prime_UTR 50.0%
CTTGATTGCCCAACTCGACT+TGG + chr6_3:18048568-18048587 None:intergenic 50.0%
!! AGTCGAGTTGGGCAATCAAG+TGG - chr6_3:18048568-18048587 Msa0942730:five_prime_UTR 50.0%
GGCATTGTGCGTGAAACATG+CGG - chr6_3:18044167-18044186 Msa0942730:intron 50.0%
ACTGTCTTTGCACCTGCATC+TGG + chr6_3:18049323-18049342 None:intergenic 50.0%
GCGCATGTCTTTGCCGAACA+AGG - chr6_3:18043629-18043648 Msa0942730:CDS 55.0%
TGCCGAACAAGGTGCACGTA+TGG - chr6_3:18043640-18043659 Msa0942730:CDS 55.0%
CGAACAAGGTGCACGTATGG+TGG - chr6_3:18043643-18043662 Msa0942730:CDS 55.0%
CGCCGACATCCAAGATGAGT+TGG - chr6_3:18043670-18043689 Msa0942730:CDS 55.0%
CTGCATCTATTGGCAGCCAC+AGG - chr6_3:18043705-18043724 Msa0942730:CDS 55.0%
GAGGGGTAGCATTGTGTGCA+CGG - chr6_3:18044215-18044234 Msa0942730:intron 55.0%
!! CACTGGCCTTGATCTTCGTG+TGG - chr6_3:18044533-18044552 Msa0942730:CDS 55.0%
GGCCTTGATCTTCGTGTGGA+TGG - chr6_3:18044537-18044556 Msa0942730:CDS 55.0%
TCAAATTGCTCCGGCGTGGT+TGG + chr6_3:18045417-18045436 None:intergenic 55.0%
CTGATCAAATTGCTCCGGCG+TGG + chr6_3:18045421-18045440 None:intergenic 55.0%
GCAACCTACTCCCGGATTCT+TGG + chr6_3:18045585-18045604 None:intergenic 55.0%
GGCTAAGCAAGAGGCAATCG+TGG - chr6_3:18045642-18045661 Msa0942730:intron 55.0%
!! TTGGTTTGGCTGTGGTCCTG+TGG - chr6_3:18047318-18047337 Msa0942730:intron 55.0%
GGCAAAACAGCCATCGTCAC+CGG - chr6_3:18048464-18048483 Msa0942730:five_prime_UTR 55.0%
AAAACAGCCATCGTCACCGG+AGG - chr6_3:18048467-18048486 Msa0942730:five_prime_UTR 55.0%
!! CAGCGGCATTGGCAAAGAGA+CGG - chr6_3:18048493-18048512 Msa0942730:five_prime_UTR 55.0%
CGCTGACATCCAAGTCGAGT+TGG - chr6_3:18048556-18048575 Msa0942730:five_prime_UTR 55.0%
CAAGTGGCTGCATCCATTGG+CGG - chr6_3:18048584-18048603 Msa0942730:five_prime_UTR 55.0%
GAAACATGCGGCACGTGCAA+TGG - chr6_3:18049094-18049113 Msa0942730:intron 55.0%
GAGGGGTAGCATTGTGTGCA+CGG - chr6_3:18044215-18044234 Msa0942730:intron 55.0%
CGGTTAACTTCACGCCACCA+TGG + chr6_3:18049172-18049191 None:intergenic 55.0%
!! CACTGGCCTTGATCTTCGTG+TGG - chr6_3:18044533-18044552 Msa0942730:CDS 55.0%
GGCCTTGATCTTCGTGTGGA+TGG - chr6_3:18044537-18044556 Msa0942730:CDS 55.0%
!! ATTGTCACCGGAGGTGCCAG+CGG - chr6_3:18043590-18043609 Msa0942730:three_prime_UTR 60.0%
!! CAGCGGCATCGGCAAAGAGA+CGG - chr6_3:18043607-18043626 Msa0942730:exon 60.0%
!! GATGGTGGACGGTTGCGTGA+GGG - chr6_3:18044197-18044216 Msa0942730:intron 60.0%
!! ATGGTGGACGGTTGCGTGAG+GGG - chr6_3:18044198-18044217 Msa0942730:intron 60.0%
AAGACGCGGTCGGCAATGGA+AGG + chr6_3:18045549-18045568 None:intergenic 60.0%
ACGAAAGACGCGGTCGGCAA+TGG + chr6_3:18045553-18045572 None:intergenic 60.0%
ATTGCCGACCGCGTCTTTCG+TGG - chr6_3:18045552-18045571 Msa0942730:intron 60.0%
CGCTCCAAGAATCCGGGAGT+AGG - chr6_3:18045578-18045597 Msa0942730:intron 60.0%
AATCGCGCGCAACCTACTCC+CGG + chr6_3:18045593-18045612 None:intergenic 60.0%
GGAGTAGGTTGCGCGCGATT+GGG - chr6_3:18045593-18045612 Msa0942730:intron 60.0%
GAGTAGGTTGCGCGCGATTG+GGG - chr6_3:18045594-18045613 Msa0942730:intron 60.0%
AGTAGGTTGCGCGCGATTGG+GGG - chr6_3:18045595-18045614 Msa0942730:intron 60.0%
TGTGGTCCTGTGGATGTGCC+AGG - chr6_3:18047328-18047347 Msa0942730:intron 60.0%
TGTCAGCCTGGCACATCCAC+AGG + chr6_3:18047337-18047356 None:intergenic 60.0%
CGTCTCTTTGCCAATGCCGC+TGG + chr6_3:18048495-18048514 None:intergenic 60.0%
TGCCGAACAAGGTGCACGCA+TGG - chr6_3:18048526-18048545 Msa0942730:five_prime_UTR 60.0%
CTGCATCCATTGGCGGCCAT+AGG - chr6_3:18048591-18048610 Msa0942730:five_prime_UTR 60.0%
ACATGCGGCACGTGCAATGG+TGG - chr6_3:18049097-18049116 Msa0942730:intron 60.0%
CATGCGGCACGTGCAATGGT+GGG - chr6_3:18049098-18049117 Msa0942730:intron 60.0%
CTTCACGCCACCATGGCTAC+CGG + chr6_3:18049165-18049184 None:intergenic 60.0%
GCTGGCACCTCCGGTGACAA+TGG + chr6_3:18043591-18043610 None:intergenic 65.0%
CGTCTCTTTGCCGATGCCGC+TGG + chr6_3:18043609-18043628 None:intergenic 65.0%
GAAACATGCGGCGCGTGCGA+TGG - chr6_3:18044179-18044198 Msa0942730:intron 65.0%
!! CGATGGTGGACGGTTGCGTG+AGG - chr6_3:18044196-18044215 Msa0942730:intron 65.0%
GCTAGCGTCGCCGGTAGCAA+CGG - chr6_3:18044237-18044256 Msa0942730:intron 65.0%
GTGGCGGCGCTCCAAGAATC+CGG - chr6_3:18045571-18045590 Msa0942730:intron 65.0%
TGGCGGCGCTCCAAGAATCC+GGG - chr6_3:18045572-18045591 Msa0942730:intron 65.0%
GGGAGTAGGTTGCGCGCGAT+TGG - chr6_3:18045592-18045611 Msa0942730:intron 65.0%
GTAGGTTGCGCGCGATTGGG+GGG - chr6_3:18045596-18045615 Msa0942730:intron 65.0%
TAGGTTGCGCGCGATTGGGG+GGG - chr6_3:18045597-18045616 Msa0942730:intron 65.0%
GGTGGGGGAGGCTAAGCAAG+AGG - chr6_3:18045633-18045652 Msa0942730:intron 65.0%
GGCAATCGTGGCGCCCTACA+TGG - chr6_3:18045654-18045673 Msa0942730:intron 65.0%
!! ATCGTCACCGGAGGTGCCAG+CGG - chr6_3:18048476-18048495 Msa0942730:five_prime_UTR 65.0%
GGTGCACCTATGGCCGCCAA+TGG + chr6_3:18048600-18048619 None:intergenic 65.0%
!! AATGGTGGGCGGGTGCGTGA+GGG - chr6_3:18049112-18049131 Msa0942730:intron 65.0%
!! ACCGGAGGTGCCAGCGGCAT+CGG - chr6_3:18043596-18043615 Msa0942730:exon 70.0%
ACATGCGGCGCGTGCGATGG+TGG - chr6_3:18044182-18044201 Msa0942730:intron 70.0%
GTGTGCACGGCTAGCGTCGC+CGG - chr6_3:18044228-18044247 Msa0942730:intron 70.0%
GCCGACCGCGTCTTTCGTGG+CGG - chr6_3:18045555-18045574 Msa0942730:intron 70.0%
GCCGCCACGAAAGACGCGGT+CGG + chr6_3:18045559-18045578 None:intergenic 70.0%
! GAGCGCCGCCACGAAAGACG+CGG + chr6_3:18045563-18045582 None:intergenic 70.0%
AGGTTGCGCGCGATTGGGGG+GGG - chr6_3:18045598-18045617 Msa0942730:intron 70.0%
GCTGGCACCTCCGGTGACGA+TGG + chr6_3:18048477-18048496 None:intergenic 70.0%
!! ACCGGAGGTGCCAGCGGCAT+TGG - chr6_3:18043596-18043615 Msa0942730:exon 70.0%
GCCAATGCCGCTGGCACCTC+CGG + chr6_3:18048486-18048505 None:intergenic 70.0%
! GCGGCACGTGCAATGGTGGG+CGG - chr6_3:18049101-18049120 Msa0942730:intron 70.0%
!! CGGCACGTGCAATGGTGGGC+GGG - chr6_3:18049102-18049121 Msa0942730:intron 70.0%
!! CAATGGTGGGCGGGTGCGTG+AGG - chr6_3:18049111-18049130 Msa0942730:intron 70.0%
!! ATGGTGGGCGGGTGCGTGAG+GGG - chr6_3:18049113-18049132 Msa0942730:intron 70.0%
GTGTGCACGGCTAGCGTCGC+CGG - chr6_3:18044228-18044247 Msa0942730:intron 70.0%
GCTAGCGTCGCCGGTAGCCA+TGG - chr6_3:18049152-18049171 Msa0942730:intron 70.0%
AGCGTCGCCGGTAGCCATGG+TGG - chr6_3:18049155-18049174 Msa0942730:intron 70.0%
GCCGATGCCGCTGGCACCTC+CGG + chr6_3:18043600-18043619 None:intergenic 75.0%
!! GCGGCGCGTGCGATGGTGGA+CGG - chr6_3:18044186-18044205 Msa0942730:intron 75.0%
GGTTGCGCGCGATTGGGGGG+GGG - chr6_3:18045599-18045618 Msa0942730:intron 75.0%
GTTGCGCGCGATTGGGGGGG+GGG - chr6_3:18045600-18045619 Msa0942730:intron 75.0%
TTGCGCGCGATTGGGGGGGG+GGG - chr6_3:18045601-18045620 Msa0942730:intron 75.0%
! TGCGCGCGATTGGGGGGGGG+GGG - chr6_3:18045602-18045621 Msa0942730:intron 80.0%
! GCGATTGGGGGGGGGGGGGT+GGG - chr6_3:18045607-18045626 Msa0942730:intron 80.0%
! CGATTGGGGGGGGGGGGGTG+GGG - chr6_3:18045608-18045627 Msa0942730:intron 80.0%
! GCGCGCGATTGGGGGGGGGG+GGG - chr6_3:18045603-18045622 Msa0942730:intron 85.0%
! CGCGATTGGGGGGGGGGGGG+TGG - chr6_3:18045606-18045625 Msa0942730:intron 85.0%
! TTGGGGGGGGGGGGGTGGGG+TGG - chr6_3:18045611-18045630 Msa0942730:intron 85.0%
! TGGGGGGGGGGGGGTGGGGT+GGG - chr6_3:18045612-18045631 Msa0942730:intron 85.0%
! GGGGGGGGGGTGGGGTGGGT+GGG - chr6_3:18045616-18045635 Msa0942730:intron 85.0%
! GGGGGGGGGTGGGGTGGGTG+GGG - chr6_3:18045617-18045636 Msa0942730:intron 85.0%
! GGGGGGGGTGGGGTGGGTGG+GGG - chr6_3:18045618-18045637 Msa0942730:intron 85.0%
! GGGGGTGGGGTGGGTGGGGG+AGG - chr6_3:18045621-18045640 Msa0942730:intron 85.0%
! GGGGGGGGGGGTGGGGTGGG+TGG - chr6_3:18045615-18045634 Msa0942730:intron 90.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 18043452 18049673 18043452 ID=Msa0942730;Name=Msa0942730
chr6_3 mRNA 18043452 18049673 18043452 ID=Msa0942730-mRNA-1;Parent=Msa0942730;Name=Msa0942730-mRNA-1;_AED=0.19;_eAED=0.19;_QI=1045|0.33|0.5|1|0.33|0.5|4|162|270
chr6_3 exon 18043452 18044153 18043452 ID=Msa0942730-mRNA-1:exon:5390;Parent=Msa0942730-mRNA-1
chr6_3 exon 18044449 18044696 18044449 ID=Msa0942730-mRNA-1:exon:5389;Parent=Msa0942730-mRNA-1
chr6_3 exon 18048356 18049068 18048356 ID=Msa0942730-mRNA-1:exon:5388;Parent=Msa0942730-mRNA-1
chr6_3 exon 18049317 18049673 18049317 ID=Msa0942730-mRNA-1:exon:5387;Parent=Msa0942730-mRNA-1
chr6_3 five_prime_UTR 18049317 18049673 18049317 ID=Msa0942730-mRNA-1:five_prime_utr;Parent=Msa0942730-mRNA-1
chr6_3 five_prime_UTR 18048381 18049068 18048381 ID=Msa0942730-mRNA-1:five_prime_utr;Parent=Msa0942730-mRNA-1
chr6_3 CDS 18048356 18048380 18048356 ID=Msa0942730-mRNA-1:cds;Parent=Msa0942730-mRNA-1
chr6_3 CDS 18044449 18044696 18044449 ID=Msa0942730-mRNA-1:cds;Parent=Msa0942730-mRNA-1
chr6_3 CDS 18043614 18044153 18043614 ID=Msa0942730-mRNA-1:cds;Parent=Msa0942730-mRNA-1
chr6_3 three_prime_UTR 18043452 18043613 18043452 ID=Msa0942730-mRNA-1:three_prime_utr;Parent=Msa0942730-mRNA-1
Gene Sequence

>Msa0942730

ATGCAATCTGTGCTTTCTATGAAGAAAGCTTCATTCACTAACAACAATCTTAGGTTAGCAGGCAAAACAGCCATCGTCACCGGAGGTGCCAGCGGCATTGGCAAAGAGACGGTGCATGTCTTTGCCGAACAAGGTGCACGCATGGTAGTGATCGCTGACATCCAAGTCGAGTTGGGCAATCAAGTGGCTGCATCCATTGGCGGCCATAGGTGCACCTACATTCATTGTGACGTAGCAAATGAAGATCAAGTCAAAAATCTCGTTCAATCGACGGTAGATATTATGTTTAGTAATGCTGGGATTGCAAGTCCATCTGATCAAACTGTGTTGGAACTCGACATTTCTCAAGCTGACCATTTGTTCTCAGTTAACATTCGAGGAATGGCATTGTGCGTGAAACATGCGGCACGTGCAATGGTGGGCGGGTGCGTGAGGGGTAGCATTGTGTGCACGGCTAGCGTCGCCGGTAGCCATGGTGGCGTGAAGTTAACCGATTACATAATGTCGAAGCACACAATAATAGGGTTGATGCGTTCGGCTAGTGTGCAACTTGCAAAGCATGGGATAAGGGTGAATTGTGTATCACCAAATGGATTAGCAACACCATTGACATGTAAATTGCCAGATGCAGGTGCAAAGACAGTTGATTTGATTTTTGGAGAATACAAGAGGTTGGAAGGAGTGGTTCTCAACACTAAACATGTGGCAGATGTTGTGTTGTTCTTGGTATCTAATGAATCTGACTTTGTCACTGGCCTTGATCTTCGTGTGGATGGTAGCTATGTTTCTGGCAAATCTGAATTAATATTTTAA
Protein sequence

>Msa0942730

MQSVLSMKKASFTNNNLRLAGKTAIVTGGASGIGKETVHVFAEQGARMVVIADIQVELGNQVAASIGGHRCTYIHCDVANEDQVKNLVQSTVDIMFSNAGIASPSDQTVLELDISQADHLFSVNIRGMALCVKHAARAMVGGCVRGSIVCTASVAGSHGGVKLTDYIMSKHTIIGLMRSASVQLAKHGIRVNCVSPNGLATPLTCKLPDAGAKTVDLIFGEYKRLEGVVLNTKHVADVVLFLVSNESDFVTGLDLRVDGSYVSGKSELIF*