Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0985550 | XP_013451833.1 | 87.874 | 668 | 53 | 8 | 1 | 662 | 1 | 646 | 0.0 | 811 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0985550 | sp|Q9C6K3|DF1_ARATH | 57.099 | 324 | 93 | 8 | 43 | 359 | 49 | 333 | 1.94e-92 | 301 |
Msa0985550 | sp|Q9C6K3|DF1_ARATH | 65.584 | 154 | 38 | 3 | 458 | 598 | 382 | 533 | 4.02e-59 | 212 |
Msa0985550 | sp|Q9C6K3|DF1_ARATH | 46.739 | 92 | 48 | 1 | 50 | 140 | 403 | 494 | 3.50e-18 | 92.0 |
Msa0985550 | sp|Q9C6K3|DF1_ARATH | 47.253 | 91 | 47 | 1 | 479 | 569 | 60 | 149 | 6.36e-18 | 91.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0985550 | G8A0T0 | 87.874 | 668 | 53 | 8 | 1 | 662 | 1 | 646 | 0.0 | 811 |
Gene ID | Type | Classification |
---|---|---|
Msa0985550 | TF | Trihelix |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0030310 | Msa0985550 | 0.847667 | 1.000376e-59 | -8.615850e-47 |
Msa0032370 | Msa0985550 | 0.835636 | 1.495185e-56 | -8.615850e-47 |
Msa0073670 | Msa0985550 | 0.803903 | 2.791984e-49 | -8.615850e-47 |
Msa0086710 | Msa0985550 | 0.807905 | 4.021533e-50 | -8.615850e-47 |
Msa0094010 | Msa0985550 | 0.800701 | 1.273817e-48 | -8.615850e-47 |
Msa0096670 | Msa0985550 | 0.819887 | 9.170862e-53 | -8.615850e-47 |
Msa0103180 | Msa0985550 | 0.807483 | 4.944051e-50 | -8.615850e-47 |
Msa0614210 | Msa0985550 | 0.829879 | 4.021100e-55 | -8.615850e-47 |
Msa0638690 | Msa0985550 | 0.816792 | 4.607179e-52 | -8.615850e-47 |
Msa0639120 | Msa0985550 | 0.826322 | 2.890743e-54 | -8.615850e-47 |
Msa0658480 | Msa0985550 | 0.808370 | 3.202881e-50 | -8.615850e-47 |
Msa0711490 | Msa0985550 | 0.805091 | 1.577674e-49 | -8.615850e-47 |
Msa0730640 | Msa0985550 | 0.820194 | 7.803436e-53 | -8.615850e-47 |
Msa0743680 | Msa0985550 | 0.827817 | 1.268759e-54 | -8.615850e-47 |
Msa0768810 | Msa0985550 | 0.804293 | 2.315797e-49 | -8.615850e-47 |
Msa0771090 | Msa0985550 | 0.800392 | 1.472589e-48 | -8.615850e-47 |
Msa0784620 | Msa0985550 | 0.830381 | 3.032468e-55 | -8.615850e-47 |
Msa0818630 | Msa0985550 | 0.816803 | 4.579704e-52 | -8.615850e-47 |
Msa0824730 | Msa0985550 | 0.818076 | 2.366559e-52 | -8.615850e-47 |
Msa0172350 | Msa0985550 | 0.822600 | 2.171548e-53 | -8.615850e-47 |
Msa0181520 | Msa0985550 | 0.836526 | 8.885219e-57 | -8.615850e-47 |
Msa0212750 | Msa0985550 | -0.804161 | 2.467355e-49 | -8.615850e-47 |
Msa0229940 | Msa0985550 | 0.829516 | 4.927385e-55 | -8.615850e-47 |
Msa0413450 | Msa0985550 | 0.811200 | 7.884071e-51 | -8.615850e-47 |
Msa0431770 | Msa0985550 | 0.801041 | 1.085520e-48 | -8.615850e-47 |
Msa0436200 | Msa0985550 | 0.807607 | 4.654829e-50 | -8.615850e-47 |
Msa0463500 | Msa0985550 | 0.811087 | 8.342388e-51 | -8.615850e-47 |
Msa0985550 | Msa1028290 | 0.829094 | 6.237806e-55 | -8.615850e-47 |
Msa0985550 | Msa1183660 | 0.803838 | 2.879166e-49 | -8.615850e-47 |
Msa0985550 | Msa1201830 | 0.818418 | 1.980401e-52 | -8.615850e-47 |
Msa0985550 | Msa1223330 | 0.804206 | 2.414319e-49 | -8.615850e-47 |
Msa0985550 | Msa1228890 | 0.804321 | 2.285228e-49 | -8.615850e-47 |
Msa0985550 | Msa1246530 | -0.801089 | 1.061399e-48 | -8.615850e-47 |
Msa0985550 | Msa1252850 | -0.807473 | 4.968647e-50 | -8.615850e-47 |
Msa0985550 | Msa1254710 | 0.804651 | 1.949996e-49 | -8.615850e-47 |
Msa0985550 | Msa1262960 | 0.813006 | 3.184221e-51 | -8.615850e-47 |
Msa0985550 | Msa1271580 | 0.800804 | 1.213475e-48 | -8.615850e-47 |
Msa0985550 | Msa1274280 | 0.800468 | 1.421057e-48 | -8.615850e-47 |
Msa0985550 | Msa1279140 | -0.814695 | 1.351618e-51 | -8.615850e-47 |
Msa0985550 | Msa1382310 | 0.810629 | 1.048022e-50 | -8.615850e-47 |
Msa0985550 | Msa1390230 | 0.832336 | 1.001950e-55 | -8.615850e-47 |
Msa0985550 | Msa1390310 | 0.824097 | 9.708891e-54 | -8.615850e-47 |
Msa0985550 | Msa1398860 | 0.802010 | 6.872844e-49 | -8.615850e-47 |
Msa0985550 | Msa1438450 | 0.843202 | 1.619662e-58 | -8.615850e-47 |
Msa0985550 | Msa1438640 | 0.802382 | 5.760877e-49 | -8.615850e-47 |
Msa0267760 | Msa0985550 | 0.813189 | 2.903767e-51 | -8.615850e-47 |
Msa0360990 | Msa0985550 | 0.815237 | 1.024897e-51 | -8.615850e-47 |
Msa0505150 | Msa0985550 | 0.811533 | 6.675515e-51 | -8.615850e-47 |
Msa0506940 | Msa0985550 | 0.833213 | 6.068962e-56 | -8.615850e-47 |
Msa0525340 | Msa0985550 | 0.814403 | 1.568601e-51 | -8.615850e-47 |
Msa0526710 | Msa0985550 | 0.804832 | 1.787560e-49 | -8.615850e-47 |
Msa0560470 | Msa0985550 | 0.806398 | 8.389021e-50 | -8.615850e-47 |
Msa0578090 | Msa0985550 | 0.800827 | 1.200352e-48 | -8.615850e-47 |
Msa0863800 | Msa0985550 | 0.843166 | 1.655603e-58 | -8.615850e-47 |
Msa0910670 | Msa0985550 | 0.931610 | 2.926754e-94 | -8.615850e-47 |
Msa0930780 | Msa0985550 | 0.814539 | 1.463616e-51 | -8.615850e-47 |
Msa0948250 | Msa0985550 | 0.829347 | 5.414944e-55 | -8.615850e-47 |
Msa0959960 | Msa0985550 | 0.905931 | 2.545871e-80 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0985550 | MtrunA17_Chr6g0463941 | 87.874 | 668 | 53 | 8 | 1 | 662 | 1 | 646 | 0.0 | 811 |
Msa0985550 | MtrunA17_Chr1g0201941 | 55.766 | 685 | 222 | 19 | 1 | 658 | 1 | 631 | 0.0 | 593 |
Msa0985550 | MtrunA17_Chr1g0201911 | 42.123 | 603 | 236 | 13 | 2 | 600 | 3 | 496 | 1.01e-125 | 384 |
Msa0985550 | MtrunA17_Chr1g0179191 | 32.907 | 313 | 143 | 8 | 46 | 357 | 124 | 370 | 4.00e-36 | 142 |
Msa0985550 | MtrunA17_Chr1g0179191 | 46.237 | 93 | 48 | 2 | 476 | 567 | 127 | 218 | 3.28e-19 | 91.3 |
Msa0985550 | MtrunA17_Chr2g0290511 | 31.597 | 288 | 145 | 7 | 281 | 568 | 115 | 350 | 1.00e-34 | 135 |
Msa0985550 | MtrunA17_Chr2g0290511 | 39.796 | 98 | 56 | 2 | 54 | 149 | 261 | 357 | 1.48e-16 | 82.0 |
Msa0985550 | MtrunA17_Chr1g0198171 | 52.756 | 127 | 55 | 2 | 54 | 175 | 113 | 239 | 1.20e-34 | 138 |
Msa0985550 | MtrunA17_Chr1g0198171 | 45.652 | 92 | 48 | 2 | 476 | 566 | 110 | 200 | 3.24e-19 | 91.3 |
Msa0985550 | MtrunA17_Chr7g0265831 | 62.500 | 104 | 33 | 3 | 46 | 145 | 108 | 209 | 4.35e-33 | 133 |
Msa0985550 | MtrunA17_Chr7g0265831 | 44.330 | 97 | 52 | 2 | 476 | 571 | 111 | 206 | 1.10e-18 | 89.7 |
Msa0985550 | MtrunA17_Chr7g0265831 | 42.500 | 80 | 46 | 0 | 277 | 356 | 285 | 364 | 4.26e-12 | 68.9 |
Msa0985550 | MtrunA17_Chr7g0273941 | 57.000 | 100 | 34 | 2 | 480 | 570 | 381 | 480 | 1.75e-28 | 119 |
Msa0985550 | MtrunA17_Chr7g0273941 | 41.837 | 98 | 47 | 2 | 55 | 142 | 381 | 478 | 5.61e-16 | 81.3 |
Msa0985550 | MtrunA17_Chr1g0190851 | 59.783 | 92 | 35 | 1 | 480 | 569 | 418 | 509 | 1.33e-26 | 114 |
Msa0985550 | MtrunA17_Chr1g0190851 | 39.785 | 93 | 53 | 2 | 53 | 142 | 416 | 508 | 4.80e-14 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0985550 | AT1G76880.1 | 57.099 | 324 | 93 | 8 | 43 | 359 | 49 | 333 | 1.97e-93 | 301 |
Msa0985550 | AT1G76880.1 | 65.584 | 154 | 38 | 3 | 458 | 598 | 382 | 533 | 4.08e-60 | 212 |
Msa0985550 | AT1G76880.1 | 46.739 | 92 | 48 | 1 | 50 | 140 | 403 | 494 | 3.56e-19 | 92.0 |
Msa0985550 | AT1G76880.1 | 47.253 | 91 | 47 | 1 | 479 | 569 | 60 | 149 | 6.46e-19 | 91.3 |
Msa0985550 | AT1G76890.2 | 48.457 | 324 | 126 | 7 | 52 | 357 | 38 | 338 | 2.55e-81 | 268 |
Msa0985550 | AT1G76890.2 | 64.029 | 139 | 40 | 3 | 459 | 597 | 378 | 506 | 4.37e-49 | 181 |
Msa0985550 | AT1G76890.2 | 44.565 | 92 | 50 | 1 | 52 | 142 | 394 | 485 | 1.85e-19 | 93.2 |
Msa0985550 | AT1G76890.2 | 43.182 | 88 | 49 | 1 | 479 | 566 | 40 | 126 | 5.20e-17 | 85.1 |
Msa0985550 | AT5G28300.1 | 37.124 | 299 | 138 | 9 | 281 | 569 | 300 | 558 | 5.58e-45 | 170 |
Msa0985550 | AT5G28300.1 | 39.815 | 108 | 54 | 3 | 48 | 144 | 452 | 559 | 2.54e-15 | 80.1 |
Msa0985550 | AT5G03680.1 | 34.202 | 307 | 142 | 7 | 55 | 356 | 119 | 370 | 9.85e-44 | 166 |
Msa0985550 | AT5G03680.1 | 44.211 | 95 | 51 | 2 | 480 | 573 | 119 | 212 | 4.98e-19 | 91.7 |
Msa0985550 | AT1G33240.3 | 59.649 | 114 | 35 | 1 | 54 | 167 | 61 | 163 | 3.41e-38 | 150 |
Msa0985550 | AT1G33240.1 | 59.649 | 114 | 35 | 1 | 54 | 167 | 61 | 163 | 7.26e-38 | 150 |
Msa0985550 | AT3G10000.1 | 57.143 | 105 | 43 | 2 | 38 | 140 | 71 | 175 | 1.50e-30 | 126 |
Msa0985550 | AT3G10000.1 | 44.086 | 93 | 51 | 1 | 476 | 567 | 84 | 176 | 1.45e-20 | 95.9 |
Msa0985550 | AT3G10000.2 | 53.846 | 104 | 38 | 2 | 38 | 140 | 71 | 165 | 8.67e-27 | 114 |
Msa0985550 | AT3G10000.2 | 41.304 | 92 | 45 | 1 | 476 | 567 | 84 | 166 | 2.26e-17 | 85.9 |
Msa0985550 | AT5G47660.1 | 51.685 | 89 | 41 | 1 | 480 | 568 | 303 | 389 | 8.52e-22 | 98.6 |
Msa0985550 | AT5G47660.1 | 47.059 | 85 | 40 | 3 | 55 | 137 | 303 | 384 | 4.84e-14 | 75.1 |
Msa0985550 | AT1G33240.2 | 38.655 | 119 | 71 | 2 | 55 | 171 | 396 | 514 | 3.03e-19 | 92.4 |
Msa0985550 | AT1G33240.2 | 54.430 | 79 | 25 | 1 | 89 | 167 | 57 | 124 | 2.24e-18 | 89.7 |
Find 226 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAAAGATGCAAGTGTTAA+AGG | 0.186987 | 6_4:-32147290 | Msa0985550:CDS |
TTCAGGTTTGATGAAGAAAA+TGG | 0.194543 | 6_4:-32144942 | Msa0985550:CDS |
CCATTATGGGAGGAGATTTC+AGG | 0.224552 | 6_4:-32144959 | Msa0985550:CDS |
TTTACCACCTCTTCCTTCTT+TGG | 0.238671 | 6_4:+32146128 | None:intergenic |
CATGTTTAAGATGTTGTAAA+TGG | 0.243597 | 6_4:-32144123 | Msa0985550:three_prime_UTR |
ATGGACCTAAAGGGCCATTA+TGG | 0.251711 | 6_4:-32144973 | Msa0985550:CDS |
TCGGTGTCGGTGTTGGTGTT+GGG | 0.265380 | 6_4:+32145323 | None:intergenic |
GATATGAAGTACCAAGAAAA+TGG | 0.297874 | 6_4:-32144992 | Msa0985550:CDS |
GGACATGTCTTTGAATCTTC+TGG | 0.297895 | 6_4:+32144830 | None:intergenic |
TCCTCCCATAATGGCCCTTT+AGG | 0.309914 | 6_4:+32144968 | None:intergenic |
GTTGTTGTTGATGATGGTAT+TGG | 0.315589 | 6_4:+32145841 | None:intergenic |
AACAGGCGCCACCAGCAGCC+AGG | 0.316128 | 6_4:-32144676 | Msa0985550:CDS |
CAACAGTCCATGCACTCTTT+TGG | 0.333863 | 6_4:+32144437 | None:intergenic |
AATATATACATAGGGGTAGA+AGG | 0.335502 | 6_4:-32144338 | Msa0985550:three_prime_UTR |
GGTGGTGGTGGATCAATTTC+AGG | 0.335799 | 6_4:-32147440 | Msa0985550:CDS |
GGAGTTGCACAAGAGGTTCT+TGG | 0.339414 | 6_4:-32145593 | Msa0985550:CDS |
GTCGGTGTCGGTGTTGGTGT+TGG | 0.352301 | 6_4:+32145322 | None:intergenic |
GTCACATCCGCCCTGGCTGC+TGG | 0.353901 | 6_4:+32144665 | None:intergenic |
TACTTTGGCTAATAGGAAAA+TGG | 0.355696 | 6_4:-32146226 | Msa0985550:intron |
GTTGAAGATAAGGTCTGATA+TGG | 0.365393 | 6_4:-32147321 | Msa0985550:CDS |
TGTGTTTGTGTTTGTGGTGG+TGG | 0.376519 | 6_4:+32146018 | None:intergenic |
AGAGGGTTATTAGTATTTGT+AGG | 0.377717 | 6_4:+32145811 | None:intergenic |
TACTAAAGATGCTGCTGTTA+TGG | 0.378392 | 6_4:-32145452 | Msa0985550:CDS |
GCTAAATAAATAAGTTCATA+AGG | 0.379541 | 6_4:-32144228 | Msa0985550:three_prime_UTR |
AAAGCAACTGTTTCTTGTCT+TGG | 0.384139 | 6_4:+32147344 | None:intergenic |
TCAGGTTTGATGAAGAAAAT+GGG | 0.384923 | 6_4:-32144941 | Msa0985550:CDS |
AATAGGAAAATGGCAGATCT+TGG | 0.385060 | 6_4:-32146216 | Msa0985550:intron |
CAAGTGTTAAAGGTCCCTTA+TGG | 0.386222 | 6_4:-32147280 | Msa0985550:CDS |
TTGAGGTGGTGGTGGTTTGT+TGG | 0.387596 | 6_4:+32144517 | None:intergenic |
ACTGGCAATGGTGCTGCTGC+TGG | 0.390612 | 6_4:+32145298 | None:intergenic |
GCAATGGCCTCCACAACAAC+AGG | 0.393419 | 6_4:-32144693 | Msa0985550:CDS |
ACAGCAGCAAGTGACGAATA+TGG | 0.394354 | 6_4:-32145119 | Msa0985550:CDS |
TGCAAAGGATTAATAGAGAA+AGG | 0.396339 | 6_4:-32145507 | Msa0985550:CDS |
CAAAGAGGTGCAAAGAGAAA+TGG | 0.396790 | 6_4:-32144904 | Msa0985550:CDS |
ACATTGGTGGTAGGTGGTGG+TGG | 0.399332 | 6_4:-32144377 | Msa0985550:three_prime_UTR |
CCTGAAATCTCCTCCCATAA+TGG | 0.399545 | 6_4:+32144959 | None:intergenic |
GGTGTTTGTGTTTGTGTTTG+TGG | 0.402861 | 6_4:+32146012 | None:intergenic |
AACGATGATGGCACCGTTGA+TGG | 0.403172 | 6_4:-32144729 | Msa0985550:CDS |
GTCGGTGTTGGTGTTGGGGT+TGG | 0.406448 | 6_4:+32145328 | None:intergenic |
CCACCTACCACCAATGTTGC+CGG | 0.409689 | 6_4:+32144383 | None:intergenic |
CAGTTGCTTTGTTGAAGATA+AGG | 0.412788 | 6_4:-32147331 | Msa0985550:CDS |
GACTCAACAGTGTTGGGAAC+AGG | 0.413588 | 6_4:-32147503 | Msa0985550:CDS |
CCTTGAAACTTCATCCCATA+AGG | 0.419165 | 6_4:+32147265 | None:intergenic |
ACAGTACATAACATTATTCA+AGG | 0.420806 | 6_4:+32144164 | None:intergenic |
GAGGGTGTGGATAGAAGTTT+TGG | 0.422223 | 6_4:-32147380 | Msa0985550:CDS |
AAGTTCGTCTTCGACTTCTT+CGG | 0.423944 | 6_4:-32145719 | Msa0985550:CDS |
AGAAATGAAGCTGTTGTTGT+AGG | 0.430108 | 6_4:+32145970 | None:intergenic |
GTAATAGTAATTTGAGGAAG+AGG | 0.435660 | 6_4:+32145793 | None:intergenic |
TGTGTGTAAGACATTGGAAT+TGG | 0.436193 | 6_4:+32145886 | None:intergenic |
ACCAACTTGATGCTCTATAC+AGG | 0.438141 | 6_4:-32144799 | Msa0985550:CDS |
AGGGGTGGGAATAGTACTAA+TGG | 0.438142 | 6_4:+32145990 | None:intergenic |
ATGTTTAAGATGTTGTAAAT+GGG | 0.443404 | 6_4:-32144122 | Msa0985550:three_prime_UTR |
TGGACCTAAAGGGCCATTAT+GGG | 0.446325 | 6_4:-32144972 | Msa0985550:CDS |
AATGGGAGAAACCATTGATT+GGG | 0.446514 | 6_4:-32144105 | Msa0985550:three_prime_UTR |
GGTGGTGGTGGTGTTATTGA+AGG | 0.449272 | 6_4:+32146033 | None:intergenic |
ACGGTGTTGTTGTTCAATAC+AGG | 0.451355 | 6_4:+32145388 | None:intergenic |
GGTATTGCTGGTATTAGTAT+TGG | 0.451522 | 6_4:+32145259 | None:intergenic |
AAATGGGAGAAACCATTGAT+TGG | 0.451715 | 6_4:-32144106 | Msa0985550:three_prime_UTR |
GGAACAGGAGGAGGAAGCTC+AGG | 0.452871 | 6_4:-32147488 | Msa0985550:CDS |
AAGTGTTAAAGGTCCCTTAT+GGG | 0.453094 | 6_4:-32147279 | Msa0985550:CDS |
GACGGAAGAGGAAGAGGAAA+TGG | 0.453743 | 6_4:-32145663 | Msa0985550:CDS |
CGAATCGACGGAAGAGGAAG+AGG | 0.460674 | 6_4:-32145669 | Msa0985550:CDS |
AGCTGCTGCGTCGAGGCCTG+AGG | 0.462044 | 6_4:-32144753 | Msa0985550:CDS |
AAAGAAATAACATATAATCT+TGG | 0.464341 | 6_4:+32144283 | None:intergenic |
GAAATGAAGCTGTTGTTGTA+GGG | 0.465028 | 6_4:+32145971 | None:intergenic |
AATGGTGCTGCTGCTGGTGT+CGG | 0.467443 | 6_4:+32145304 | None:intergenic |
GCTGCTGCTGGTGTCGGTGT+CGG | 0.467777 | 6_4:+32145310 | None:intergenic |
CCTTATGGGATGAAGTTTCA+AGG | 0.471695 | 6_4:-32147265 | Msa0985550:intron |
GCATCAAGTTGGTGAAAGTA+AGG | 0.472098 | 6_4:+32144809 | None:intergenic |
CTAGGGGACTCAACAGTGTT+GGG | 0.473609 | 6_4:-32147509 | Msa0985550:CDS |
TGTGGAGGCCATTGCTGCTC+CGG | 0.474042 | 6_4:+32144701 | None:intergenic |
GTTTGTGTTTGTGGTGGTGG+TGG | 0.476234 | 6_4:+32146021 | None:intergenic |
GGCAATGGTACTGCTGGTAC+TGG | 0.477694 | 6_4:+32145280 | None:intergenic |
TGGAAGTAGTAGAAATGAAG+AGG | 0.480126 | 6_4:-32147399 | Msa0985550:CDS |
GCAAAGGATTAATAGAGAAA+GGG | 0.481748 | 6_4:-32145506 | Msa0985550:CDS |
TACCAAGAAAATGGACCTAA+AGG | 0.481995 | 6_4:-32144983 | Msa0985550:CDS |
GCTGGTGGCGCCTGTTGTTG+TGG | 0.482373 | 6_4:+32144683 | None:intergenic |
TTTCTTTGAGAGACTAATGA+AGG | 0.482390 | 6_4:-32145635 | Msa0985550:CDS |
CTTGAAACTTCATCCCATAA+GGG | 0.483873 | 6_4:+32147266 | None:intergenic |
TAGTAGAAATGAAGAGGGTG+TGG | 0.484511 | 6_4:-32147393 | Msa0985550:CDS |
GAGGGTTATTAGTATTTGTA+GGG | 0.485687 | 6_4:+32145812 | None:intergenic |
TGGTGGAAAATGTGTAGGGT+TGG | 0.486037 | 6_4:+32145861 | None:intergenic |
AAATAAGTTCATAAGGGAGA+TGG | 0.486341 | 6_4:-32144221 | Msa0985550:three_prime_UTR |
CGGTGTCGGTGTTGGTGTTG+GGG | 0.486815 | 6_4:+32145324 | None:intergenic |
GGAAACGACAACAATGGAAG+GGG | 0.487557 | 6_4:-32145695 | Msa0985550:CDS |
AATAAGTTCATAAGGGAGAT+GGG | 0.488356 | 6_4:-32144220 | Msa0985550:three_prime_UTR |
CTCCATGGTCACATCCGCCC+TGG | 0.491677 | 6_4:+32144658 | None:intergenic |
ATAGGAAAATGGCAGATCTT+GGG | 0.492836 | 6_4:-32146215 | Msa0985550:intron |
ACCAAGAAAATGGACCTAAA+GGG | 0.493139 | 6_4:-32144982 | Msa0985550:CDS |
ACATCAGCAGCAGCAACAAC+AGG | 0.496241 | 6_4:-32145152 | Msa0985550:CDS |
GCAGCAGCAACAACAGGTTC+AGG | 0.497898 | 6_4:-32145146 | Msa0985550:CDS |
GCTGGTGTCGGTGTCGGTGT+TGG | 0.501369 | 6_4:+32145316 | None:intergenic |
GGGGATCGAATCGACGGAAG+AGG | 0.501747 | 6_4:-32145675 | Msa0985550:CDS |
GGAATTGGAAGTGTAGTTGA+TGG | 0.503022 | 6_4:+32145901 | None:intergenic |
TGTTGCGGTGTAGGTATTGC+TGG | 0.503047 | 6_4:+32145247 | None:intergenic |
TAAGATAAAGAAAATAATAG+AGG | 0.504671 | 6_4:-32144193 | Msa0985550:three_prime_UTR |
GCAACATTGGTGGTAGGTGG+TGG | 0.504677 | 6_4:-32144380 | Msa0985550:three_prime_UTR |
GGCACCGTTGATGGTTCAGC+CGG | 0.506059 | 6_4:-32144720 | Msa0985550:CDS |
TGTTGCTGCTGCTGATGTTG+TGG | 0.506243 | 6_4:+32145157 | None:intergenic |
GAAGGTGATTGATGCATTGA+AGG | 0.506401 | 6_4:+32146051 | None:intergenic |
AAAGAGGTGCAAAGAGAAAT+GGG | 0.507157 | 6_4:-32144903 | Msa0985550:CDS |
CTAAATAAATAAGTTCATAA+GGG | 0.509862 | 6_4:-32144227 | Msa0985550:three_prime_UTR |
GGAGGAGGAAGCTCAGGAGA+TGG | 0.512647 | 6_4:-32147482 | Msa0985550:CDS |
GTTTGAACTTGTTGCGGTGT+AGG | 0.516119 | 6_4:+32145238 | None:intergenic |
CACTCCTATGCAGCTATGCT+AGG | 0.516756 | 6_4:-32147527 | Msa0985550:exon |
GGCAACGACACCGGCAACAT+TGG | 0.518399 | 6_4:-32144393 | Msa0985550:three_prime_UTR |
AACAGCACCGGTCATTCCTC+AGG | 0.519741 | 6_4:-32145191 | Msa0985550:CDS |
CACCACCACCTCAATAAAAG+AGG | 0.521765 | 6_4:-32144508 | Msa0985550:exon |
GGTGCCATCATCGTTCCCTC+AGG | 0.524674 | 6_4:+32144737 | None:intergenic |
ACTCCTATGCAGCTATGCTA+GGG | 0.525198 | 6_4:-32147526 | Msa0985550:exon |
GAGGTGCTAGAGAAGAAGCT+TGG | 0.525337 | 6_4:-32145543 | Msa0985550:CDS |
GAGAAAAGAGAAAGAGAGAG+AGG | 0.527477 | 6_4:-32145562 | Msa0985550:CDS |
GGAAGCTCAGGAGATGGAGC+AGG | 0.527517 | 6_4:-32147476 | Msa0985550:CDS |
TGGTTCAGCCGGAGCAGCAA+TGG | 0.528420 | 6_4:-32144709 | Msa0985550:CDS |
GCTAGGGGACTCAACAGTGT+TGG | 0.529101 | 6_4:-32147510 | Msa0985550:CDS |
ACAGTGTTGGGAACAGGAGG+AGG | 0.532710 | 6_4:-32147497 | Msa0985550:CDS |
TTGAATGAGGCTCTAGGTGG+GGG | 0.533373 | 6_4:-32144460 | Msa0985550:three_prime_UTR |
TGATGCATGCAAGTTCATCT+AGG | 0.535689 | 6_4:-32145063 | Msa0985550:CDS |
AACAAGAGGAGTTGCACAAG+AGG | 0.535913 | 6_4:-32145600 | Msa0985550:CDS |
GAAATATTAGCGAATGAAGA+TGG | 0.536488 | 6_4:+32145763 | None:intergenic |
TGTTGTTGCACTGTTACAGT+TGG | 0.536680 | 6_4:+32145214 | None:intergenic |
GCTGCTGCGTCGAGGCCTGA+GGG | 0.536821 | 6_4:-32144752 | Msa0985550:CDS |
GCTTACCATGATGGTGGTGG+TGG | 0.537546 | 6_4:-32147452 | Msa0985550:CDS |
AACGACACCGGCAACATTGG+TGG | 0.538181 | 6_4:-32144390 | Msa0985550:three_prime_UTR |
ACATCCGCCCTGGCTGCTGG+TGG | 0.538679 | 6_4:+32144668 | None:intergenic |
AGTATTGGCAATGGTACTGC+TGG | 0.539665 | 6_4:+32145274 | None:intergenic |
GGGGTGGGAATAGTACTAAT+GGG | 0.539998 | 6_4:+32145991 | None:intergenic |
TGCTCCGGCTGAACCATCAA+CGG | 0.540154 | 6_4:+32144716 | None:intergenic |
TAATAGTAATTTGAGGAAGA+GGG | 0.542471 | 6_4:+32145794 | None:intergenic |
GATGGAACAGTGGTGGTAAG+AGG | 0.542953 | 6_4:+32145919 | None:intergenic |
GGTATTGGTGGAAAATGTGT+AGG | 0.543430 | 6_4:+32145856 | None:intergenic |
GGCGAAGCCTGAGGAATGAC+CGG | 0.543584 | 6_4:+32145184 | None:intergenic |
GAGGCCTGAGGGAACGATGA+TGG | 0.544953 | 6_4:-32144741 | Msa0985550:CDS |
TGAAGGAAAGCAACAAGAAG+AGG | 0.547925 | 6_4:-32144853 | Msa0985550:CDS |
CTGAGAATGCTGAGAATCAT+CGG | 0.548012 | 6_4:-32144631 | Msa0985550:CDS |
GGAAGAGGTGGTAAATCAGA+TGG | 0.550653 | 6_4:-32146120 | Msa0985550:CDS |
TTGGATTGTGTGTAAGACAT+TGG | 0.551286 | 6_4:+32145880 | None:intergenic |
AGAGGTGTAGAGTTTAACAA+TGG | 0.553484 | 6_4:+32145937 | None:intergenic |
ACAGGCGCCACCAGCAGCCA+GGG | 0.555235 | 6_4:-32144675 | Msa0985550:CDS |
GTGCTAGAGAAGAAGCTTGG+AGG | 0.555286 | 6_4:-32145540 | Msa0985550:CDS |
TTGTTGTTGTTGAGGAATGA+CGG | 0.557825 | 6_4:+32145369 | None:intergenic |
TATTAGCGAATGAAGATGGT+GGG | 0.558390 | 6_4:+32145767 | None:intergenic |
CAATCATTGAATGAGGCTCT+AGG | 0.559014 | 6_4:-32144466 | Msa0985550:three_prime_UTR |
GTTGTTGATGATGGTATTGG+TGG | 0.559014 | 6_4:+32145844 | None:intergenic |
ATATATACATAGGGGTAGAA+GGG | 0.559541 | 6_4:-32144337 | Msa0985550:three_prime_UTR |
TGCTGCTGATGTTGTGGCAA+CGG | 0.560332 | 6_4:+32145163 | None:intergenic |
GTAAGCGGCGGCAACGACAC+CGG | 0.561717 | 6_4:-32144402 | Msa0985550:three_prime_UTR |
GAGGAAACGACAACAATGGA+AGG | 0.562272 | 6_4:-32145697 | Msa0985550:CDS |
TGCGGCGCTTGTTGTTGTTG+AGG | 0.562772 | 6_4:+32145361 | None:intergenic |
TCAACAACAACAAGCGCCGC+AGG | 0.568754 | 6_4:-32145359 | Msa0985550:CDS |
TGAAGCTGTTGTTGTAGGGG+TGG | 0.568902 | 6_4:+32145975 | None:intergenic |
ATTAGCGAATGAAGATGGTG+GGG | 0.569029 | 6_4:+32145768 | None:intergenic |
TATCACAAGAGAACCAAAGA+AGG | 0.569305 | 6_4:-32146141 | Msa0985550:CDS |
GGAGGTTGCAAGAGATGCAA+AGG | 0.569352 | 6_4:-32145522 | Msa0985550:CDS |
TTTCAGGTGATGATGAAAGA+GGG | 0.571339 | 6_4:-32147424 | Msa0985550:CDS |
GTTTGTGTTTGTGTTTGTGG+TGG | 0.572269 | 6_4:+32146015 | None:intergenic |
TTGATCCACCACCACCATCA+TGG | 0.573497 | 6_4:+32147447 | None:intergenic |
AAGAGAACCAAAGAAGGAAG+AGG | 0.573797 | 6_4:-32146135 | Msa0985550:CDS |
TTCATTCGCTAATATTTCAG+CGG | 0.578885 | 6_4:-32145758 | Msa0985550:CDS |
TTCGTCTTCGACTTCTTCGG+AGG | 0.579514 | 6_4:-32145716 | Msa0985550:CDS |
TCATCGGCCGCGTCGAGATG+AGG | 0.579888 | 6_4:-32144615 | Msa0985550:CDS |
CAGGCAGAAGAACAAGGTGG+AGG | 0.580136 | 6_4:-32144780 | Msa0985550:CDS |
CAGGTTTGATGAAGAAAATG+GGG | 0.580467 | 6_4:-32144940 | Msa0985550:CDS |
TTGTAATCAATCATTGAATG+AGG | 0.581195 | 6_4:-32144473 | Msa0985550:three_prime_UTR |
GGTACTGCTGGTACTGGCAA+TGG | 0.588980 | 6_4:+32145286 | None:intergenic |
CATTGAATGAGGCTCTAGGT+GGG | 0.589147 | 6_4:-32144462 | Msa0985550:three_prime_UTR |
GGAGCAGGAGCTTACCATGA+TGG | 0.589395 | 6_4:-32147461 | Msa0985550:CDS |
GTCCCCTAGCATAGCTGCAT+AGG | 0.589597 | 6_4:+32147523 | None:intergenic |
ATTTCAGGTGATGATGAAAG+AGG | 0.592121 | 6_4:-32147425 | Msa0985550:CDS |
GGGAGAAACCATTGATTGGG+GGG | 0.594065 | 6_4:-32144102 | Msa0985550:three_prime_UTR |
AGAACCAAAGAAGGAAGAGG+TGG | 0.595193 | 6_4:-32146132 | Msa0985550:CDS |
GCTGGTATTAGTATTGGCAA+TGG | 0.595682 | 6_4:+32145265 | None:intergenic |
ATTGAATGAGGCTCTAGGTG+GGG | 0.596893 | 6_4:-32144461 | Msa0985550:three_prime_UTR |
GATGACGAGGACGAAGATGA+AGG | 0.597081 | 6_4:-32144563 | Msa0985550:CDS |
ATGGGAGAAACCATTGATTG+GGG | 0.597325 | 6_4:-32144104 | Msa0985550:three_prime_UTR |
CATAGGGGTAGAAGGGTGTG+AGG | 0.598113 | 6_4:-32144330 | Msa0985550:three_prime_UTR |
AGCATTCTCAGCATCCTCCA+TGG | 0.598685 | 6_4:+32144643 | None:intergenic |
GAATATTATGACGATGATGA+CGG | 0.600596 | 6_4:-32144590 | Msa0985550:CDS |
GGCGCCACCAGCAGCCAGGG+CGG | 0.602641 | 6_4:-32144672 | Msa0985550:CDS |
AGGGTGCAGCTGCTGCGTCG+AGG | 0.603837 | 6_4:-32144760 | Msa0985550:CDS |
GGAAGTAGTAGAAATGAAGA+GGG | 0.606377 | 6_4:-32147398 | Msa0985550:CDS |
TTCGGAGGAAACGACAACAA+TGG | 0.607000 | 6_4:-32145701 | Msa0985550:CDS |
GGAGGTTGTTGAGAAACAAG+AGG | 0.607799 | 6_4:-32145614 | Msa0985550:CDS |
CTTTGAGAGACTAATGAAGG+AGG | 0.607887 | 6_4:-32145632 | Msa0985550:CDS |
GCCTGTATAGAGCATCAAGT+TGG | 0.608740 | 6_4:+32144798 | None:intergenic |
GAAGAGGAAGAGGAAATGGA+AGG | 0.609651 | 6_4:-32145659 | Msa0985550:CDS |
TTAGCGAATGAAGATGGTGG+GGG | 0.612373 | 6_4:+32145769 | None:intergenic |
CAAGTATTTCAAGAAAGTGA+AGG | 0.613019 | 6_4:-32144870 | Msa0985550:CDS |
GTATTGGTGGAAAATGTGTA+GGG | 0.617041 | 6_4:+32145857 | None:intergenic |
AAGGTGATTGATGCATTGAA+GGG | 0.619014 | 6_4:+32146052 | None:intergenic |
TCAACAGTGTTGGGAACAGG+AGG | 0.620361 | 6_4:-32147500 | Msa0985550:CDS |
GAAGCTGTTGTTGTAGGGGT+GGG | 0.625788 | 6_4:+32145976 | None:intergenic |
TCTATACAGGCAGAAGAACA+AGG | 0.628687 | 6_4:-32144786 | Msa0985550:CDS |
ATATTAGCGAATGAAGATGG+TGG | 0.629833 | 6_4:+32145766 | None:intergenic |
TGGGAGAAACCATTGATTGG+GGG | 0.629834 | 6_4:-32144103 | Msa0985550:three_prime_UTR |
ACCTAAAGGGCCATTATGGG+AGG | 0.631216 | 6_4:-32144969 | Msa0985550:CDS |
TGTGGCAACGGCGAAGCCTG+AGG | 0.633518 | 6_4:+32145175 | None:intergenic |
TTCAGGTGATGATGAAAGAG+GGG | 0.634874 | 6_4:-32147423 | Msa0985550:CDS |
AGCCAGGGCGGATGTGACCA+TGG | 0.636181 | 6_4:-32144660 | Msa0985550:CDS |
TCATTGAATGAGGCTCTAGG+TGG | 0.636284 | 6_4:-32144463 | Msa0985550:three_prime_UTR |
GGTGTAGAGTTTAACAATGG+AGG | 0.640467 | 6_4:+32145940 | None:intergenic |
CTCCTATGCAGCTATGCTAG+GGG | 0.640615 | 6_4:-32147525 | Msa0985550:exon |
AGGAAACGACAACAATGGAA+GGG | 0.641866 | 6_4:-32145696 | Msa0985550:CDS |
CCGGCAACATTGGTGGTAGG+TGG | 0.643227 | 6_4:-32144383 | Msa0985550:three_prime_UTR |
AGGCAGAAGAACAAGGTGGA+GGG | 0.643787 | 6_4:-32144779 | Msa0985550:CDS |
GTTGGAGTTTGAACTTGTTG+CGG | 0.644658 | 6_4:+32145232 | None:intergenic |
GGAGCTTACCATGATGGTGG+TGG | 0.649488 | 6_4:-32147455 | Msa0985550:CDS |
GTGTTGTTGTTCAATACAGG+AGG | 0.651178 | 6_4:+32145391 | None:intergenic |
AGTGCAACAACAAACAGCAC+CGG | 0.652497 | 6_4:-32145203 | Msa0985550:CDS |
ACACCGGCAACATTGGTGGT+AGG | 0.652854 | 6_4:-32144386 | Msa0985550:three_prime_UTR |
GGGGTTGGTGTAGTTTCCTG+CGG | 0.653086 | 6_4:+32145343 | None:intergenic |
GGTGGCGCCTGTTGTTGTGG+AGG | 0.655534 | 6_4:+32144686 | None:intergenic |
TCAGGTGATGATGAAAGAGG+GGG | 0.658562 | 6_4:-32147422 | Msa0985550:CDS |
AAATGAAGCTGTTGTTGTAG+GGG | 0.668647 | 6_4:+32145972 | None:intergenic |
GAAACGACAACAATGGAAGG+GGG | 0.686144 | 6_4:-32145694 | Msa0985550:CDS |
TGCATGCAAGTTCATCTAGG+TGG | 0.686396 | 6_4:-32145060 | Msa0985550:CDS |
GCAGGAGCTTACCATGATGG+TGG | 0.707615 | 6_4:-32147458 | Msa0985550:CDS |
GTTGCGAAAAGTGACAACAA+TGG | 0.712598 | 6_4:-32145094 | Msa0985550:CDS |
AAGTGTAGTTGATGGAACAG+TGG | 0.713309 | 6_4:+32145909 | None:intergenic |
GGTACAATAGAAATGCAAAG+AGG | 0.715312 | 6_4:-32144919 | Msa0985550:CDS |
AGGTAGTGACAATTATGAAG+TGG | 0.722373 | 6_4:-32144543 | Msa0985550:CDS |
TGTAGTTGATGGAACAGTGG+TGG | 0.725823 | 6_4:+32145912 | None:intergenic |
CAGGGCGGATGTGACCATGG+AGG | 0.727693 | 6_4:-32144657 | Msa0985550:CDS |
ATACAGGCAGAAGAACAAGG+TGG | 0.746845 | 6_4:-32144783 | Msa0985550:CDS |
TATTCTTCCTCATCTCGACG+CGG | 0.761362 | 6_4:+32144608 | None:intergenic |
TGATGACGGTGATGATGACG+AGG | 0.768255 | 6_4:-32144576 | Msa0985550:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATTAAAAATATACATGA+GGG | + | chr6_4:32144786-32144805 | None:intergenic | 10.0% |
!! | TTAAATTAAAAATATACATG+AGG | + | chr6_4:32144787-32144806 | None:intergenic | 10.0% |
!! | AAAAGAAAAAATAAAATTTC+TGG | + | chr6_4:32145382-32145401 | None:intergenic | 10.0% |
!!! | ATTAATTTTGTCTTTATTTT+TGG | - | chr6_4:32145403-32145422 | Msa0985550:CDS | 10.0% |
!!! | TTAATTTTGTCTTTATTTTT+GGG | - | chr6_4:32145404-32145423 | Msa0985550:CDS | 10.0% |
!!! | AAATTTTTGAATATATACAT+AGG | - | chr6_4:32147306-32147325 | Msa0985550:CDS | 10.0% |
!!! | AATTTTTGAATATATACATA+GGG | - | chr6_4:32147307-32147326 | Msa0985550:CDS | 10.0% |
!! | AAAAAATAATTAATAGTTTC+CGG | + | chr6_4:32147403-32147422 | None:intergenic | 10.0% |
!!! | TTACATTTAACTTTATTTTT+TGG | - | chr6_4:32147590-32147609 | Msa0985550:five_prime_UTR | 10.0% |
!! | CAAATCAAAGATAAAAAAAT+AGG | + | chr6_4:32144687-32144706 | None:intergenic | 15.0% |
!!! | CTATTTTTTTATCTTTGATT+TGG | - | chr6_4:32144685-32144704 | Msa0985550:CDS | 15.0% |
!!! | TATTTTTCAACACTAAAAAT+GGG | + | chr6_4:32145019-32145038 | None:intergenic | 15.0% |
!!! | TTATTTTTCAACACTAAAAA+TGG | + | chr6_4:32145020-32145039 | None:intergenic | 15.0% |
!! | GTTGAAAAATAAAAATATGA+TGG | - | chr6_4:32145028-32145047 | Msa0985550:CDS | 15.0% |
!!! | ATTTTTGAATATATACATAG+GGG | - | chr6_4:32147308-32147327 | Msa0985550:CDS | 15.0% |
!! | AAAGAAATAACATATAATCT+TGG | + | chr6_4:32147373-32147392 | None:intergenic | 15.0% |
!! | CTAAATAAATAAGTTCATAA+GGG | - | chr6_4:32147426-32147445 | Msa0985550:CDS | 15.0% |
!! | TAAGATAAAGAAAATAATAG+AGG | - | chr6_4:32147460-32147479 | Msa0985550:CDS | 15.0% |
!! | TAAATTAATAAATGGGATTG+AGG | + | chr6_4:32144563-32144582 | None:intergenic | 20.0% |
!!! | TTCAAGTTTGTAACTTTATT+TGG | + | chr6_4:32144949-32144968 | None:intergenic | 20.0% |
!!! | ATTAAAAAGTTTGTTTCTCA+TGG | + | chr6_4:32145096-32145115 | None:intergenic | 20.0% |
!!! | TATATCAAAGTTGATGTAAT+TGG | + | chr6_4:32145175-32145194 | None:intergenic | 20.0% |
!! | AACTTAAGTGATTAAGATAA+GGG | + | chr6_4:32145220-32145239 | None:intergenic | 20.0% |
!! | TAACTTAAGTGATTAAGATA+AGG | + | chr6_4:32145221-32145240 | None:intergenic | 20.0% |
!! | TCTTATCTCATTAAATCTTT+AGG | + | chr6_4:32145354-32145373 | None:intergenic | 20.0% |
!!! | AAACTTTTCTTTGCATTTTT+TGG | + | chr6_4:32145477-32145496 | None:intergenic | 20.0% |
!!! | TGTTATTTCTTTTTCAAAAC+CGG | - | chr6_4:32147381-32147400 | Msa0985550:CDS | 20.0% |
!! | GCTAAATAAATAAGTTCATA+AGG | - | chr6_4:32147425-32147444 | Msa0985550:CDS | 20.0% |
!!! | ATGTTTAAGATGTTGTAAAT+GGG | - | chr6_4:32147531-32147550 | Msa0985550:exon | 20.0% |
!!! | TTTTTTTTCCAGATTTCTGA+AGG | + | chr6_4:32144477-32144496 | None:intergenic | 25.0% |
! | TCAATAATTCAGATTTCTCA+AGG | + | chr6_4:32144627-32144646 | None:intergenic | 25.0% |
! | AAAATGGGTAACTGAAATAA+GGG | + | chr6_4:32145004-32145023 | None:intergenic | 25.0% |
! | AAAAATGGGTAACTGAAATA+AGG | + | chr6_4:32145005-32145024 | None:intergenic | 25.0% |
! | TAGGATAAGAAGCAATTAAT+TGG | + | chr6_4:32145335-32145354 | None:intergenic | 25.0% |
! | TAATAGTAATTTGAGGAAGA+GGG | + | chr6_4:32145862-32145881 | None:intergenic | 25.0% |
! | TTGTAATCAATCATTGAATG+AGG | - | chr6_4:32147180-32147199 | Msa0985550:intron | 25.0% |
! | ACAGTACATAACATTATTCA+AGG | + | chr6_4:32147492-32147511 | None:intergenic | 25.0% |
!! | CATGTTTAAGATGTTGTAAA+TGG | - | chr6_4:32147530-32147549 | Msa0985550:exon | 25.0% |
!!! | TTTTTTGTAAGGCACAAACT+AGG | - | chr6_4:32144036-32144055 | Msa0985550:three_prime_UTR | 30.0% |
! | TTTTTGTAAGGCACAAACTA+GGG | - | chr6_4:32144037-32144056 | Msa0985550:three_prime_UTR | 30.0% |
TTCAAAGATGCAAGTGTTAA+AGG | - | chr6_4:32144363-32144382 | Msa0985550:three_prime_UTR | 30.0% | |
ATAATTCAGATTTCTCAAGG+TGG | + | chr6_4:32144624-32144643 | None:intergenic | 30.0% | |
!! | GGAAGAAAATCTTTGCTTTT+TGG | + | chr6_4:32144980-32144999 | None:intergenic | 30.0% |
CAAAATCTTTGTTCACACTT+TGG | - | chr6_4:32145058-32145077 | Msa0985550:CDS | 30.0% | |
AGACAACCAAAGAATTGAAA+TGG | + | chr6_4:32145250-32145269 | None:intergenic | 30.0% | |
!!! | GTCTTTATTTTTGGGTACTT+TGG | - | chr6_4:32145412-32145431 | Msa0985550:CDS | 30.0% |
TACTTTGGCTAATAGGAAAA+TGG | - | chr6_4:32145427-32145446 | Msa0985550:CDS | 30.0% | |
!! | TTTGTTGTTGTTGTTGATGA+TGG | + | chr6_4:32145821-32145840 | None:intergenic | 30.0% |
GAGGGTTATTAGTATTTGTA+GGG | + | chr6_4:32145844-32145863 | None:intergenic | 30.0% | |
AGAGGGTTATTAGTATTTGT+AGG | + | chr6_4:32145845-32145864 | None:intergenic | 30.0% | |
GTAATAGTAATTTGAGGAAG+AGG | + | chr6_4:32145863-32145882 | None:intergenic | 30.0% | |
GAAATATTAGCGAATGAAGA+TGG | + | chr6_4:32145893-32145912 | None:intergenic | 30.0% | |
TTCATTCGCTAATATTTCAG+CGG | - | chr6_4:32145895-32145914 | Msa0985550:CDS | 30.0% | |
! | TTTCTTTGAGAGACTAATGA+AGG | - | chr6_4:32146018-32146037 | Msa0985550:CDS | 30.0% |
TGCAAAGGATTAATAGAGAA+AGG | - | chr6_4:32146146-32146165 | Msa0985550:CDS | 30.0% | |
GCAAAGGATTAATAGAGAAA+GGG | - | chr6_4:32146147-32146166 | Msa0985550:CDS | 30.0% | |
! | GATATGAAGTACCAAGAAAA+TGG | - | chr6_4:32146661-32146680 | Msa0985550:intron | 30.0% |
! | TTCAGGTTTGATGAAGAAAA+TGG | - | chr6_4:32146711-32146730 | Msa0985550:intron | 30.0% |
TCAGGTTTGATGAAGAAAAT+GGG | - | chr6_4:32146712-32146731 | Msa0985550:intron | 30.0% | |
CAAGTATTTCAAGAAAGTGA+AGG | - | chr6_4:32146783-32146802 | Msa0985550:intron | 30.0% | |
GAATATTATGACGATGATGA+CGG | - | chr6_4:32147063-32147082 | Msa0985550:intron | 30.0% | |
! | TATTTGCTCCTCTTTTATTG+AGG | + | chr6_4:32147156-32147175 | None:intergenic | 30.0% |
AATATATACATAGGGGTAGA+AGG | - | chr6_4:32147315-32147334 | Msa0985550:CDS | 30.0% | |
ATATATACATAGGGGTAGAA+GGG | - | chr6_4:32147316-32147335 | Msa0985550:CDS | 30.0% | |
AAATAAGTTCATAAGGGAGA+TGG | - | chr6_4:32147432-32147451 | Msa0985550:CDS | 30.0% | |
AATAAGTTCATAAGGGAGAT+GGG | - | chr6_4:32147433-32147452 | Msa0985550:CDS | 30.0% | |
!!! | GTTCTGTGCTGTTTTTTGTA+AGG | - | chr6_4:32144025-32144044 | Msa0985550:three_prime_UTR | 35.0% |
! | ATTTCAGGTGATGATGAAAG+AGG | - | chr6_4:32144228-32144247 | Msa0985550:three_prime_UTR | 35.0% |
! | TTTCAGGTGATGATGAAAGA+GGG | - | chr6_4:32144229-32144248 | Msa0985550:three_prime_UTR | 35.0% |
TGGAAGTAGTAGAAATGAAG+AGG | - | chr6_4:32144254-32144273 | Msa0985550:three_prime_UTR | 35.0% | |
GGAAGTAGTAGAAATGAAGA+GGG | - | chr6_4:32144255-32144274 | Msa0985550:three_prime_UTR | 35.0% | |
!! | GAAGTTTTGGTGGTAATAGA+TGG | - | chr6_4:32144286-32144305 | Msa0985550:three_prime_UTR | 35.0% |
! | AAAGCAACTGTTTCTTGTCT+TGG | + | chr6_4:32144312-32144331 | None:intergenic | 35.0% |
! | CAGTTGCTTTGTTGAAGATA+AGG | - | chr6_4:32144322-32144341 | Msa0985550:three_prime_UTR | 35.0% |
GTTGAAGATAAGGTCTGATA+TGG | - | chr6_4:32144332-32144351 | Msa0985550:three_prime_UTR | 35.0% | |
AAGTGTTAAAGGTCCCTTAT+GGG | - | chr6_4:32144374-32144393 | Msa0985550:three_prime_UTR | 35.0% | |
CTTGAAACTTCATCCCATAA+GGG | + | chr6_4:32144390-32144409 | None:intergenic | 35.0% | |
!! | TTTTTCCAGATTTCTGAAGG+TGG | + | chr6_4:32144474-32144493 | None:intergenic | 35.0% |
AAGTGATTAAGATAAGGGAG+AGG | + | chr6_4:32145215-32145234 | None:intergenic | 35.0% | |
CTTGCTCCATTTCAATTCTT+TGG | - | chr6_4:32145241-32145260 | Msa0985550:CDS | 35.0% | |
!! | TTTTGGGTACTTTGGCTAAT+AGG | - | chr6_4:32145420-32145439 | Msa0985550:CDS | 35.0% |
AATAGGAAAATGGCAGATCT+TGG | - | chr6_4:32145437-32145456 | Msa0985550:CDS | 35.0% | |
ATAGGAAAATGGCAGATCTT+GGG | - | chr6_4:32145438-32145457 | Msa0985550:CDS | 35.0% | |
TATCACAAGAGAACCAAAGA+AGG | - | chr6_4:32145512-32145531 | Msa0985550:CDS | 35.0% | |
!! | CATTGAAGGGTTGTTTTCAA+GGG | + | chr6_4:32145591-32145610 | None:intergenic | 35.0% |
AAGGTGATTGATGCATTGAA+GGG | + | chr6_4:32145604-32145623 | None:intergenic | 35.0% | |
AAATGAAGCTGTTGTTGTAG+GGG | + | chr6_4:32145684-32145703 | None:intergenic | 35.0% | |
GAAATGAAGCTGTTGTTGTA+GGG | + | chr6_4:32145685-32145704 | None:intergenic | 35.0% | |
AGAAATGAAGCTGTTGTTGT+AGG | + | chr6_4:32145686-32145705 | None:intergenic | 35.0% | |
! | AGAGGTGTAGAGTTTAACAA+TGG | + | chr6_4:32145719-32145738 | None:intergenic | 35.0% |
TGTGTGTAAGACATTGGAAT+TGG | + | chr6_4:32145770-32145789 | None:intergenic | 35.0% | |
TTGGATTGTGTGTAAGACAT+TGG | + | chr6_4:32145776-32145795 | None:intergenic | 35.0% | |
! | GTATTGGTGGAAAATGTGTA+GGG | + | chr6_4:32145799-32145818 | None:intergenic | 35.0% |
!! | GTTGTTGTTGATGATGGTAT+TGG | + | chr6_4:32145815-32145834 | None:intergenic | 35.0% |
TATTAGCGAATGAAGATGGT+GGG | + | chr6_4:32145889-32145908 | None:intergenic | 35.0% | |
ATATTAGCGAATGAAGATGG+TGG | + | chr6_4:32145890-32145909 | None:intergenic | 35.0% | |
TACTAAAGATGCTGCTGTTA+TGG | - | chr6_4:32146201-32146220 | Msa0985550:CDS | 35.0% | |
! | TTGTTGTTGTTGAGGAATGA+CGG | + | chr6_4:32146287-32146306 | None:intergenic | 35.0% |
GGTATTGCTGGTATTAGTAT+TGG | + | chr6_4:32146397-32146416 | None:intergenic | 35.0% | |
TACCAAGAAAATGGACCTAA+AGG | - | chr6_4:32146670-32146689 | Msa0985550:intron | 35.0% | |
ACCAAGAAAATGGACCTAAA+GGG | - | chr6_4:32146671-32146690 | Msa0985550:intron | 35.0% | |
CAGGTTTGATGAAGAAAATG+GGG | - | chr6_4:32146713-32146732 | Msa0985550:intron | 35.0% | |
GGTACAATAGAAATGCAAAG+AGG | - | chr6_4:32146734-32146753 | Msa0985550:intron | 35.0% | |
! | AAAGAGGTGCAAAGAGAAAT+GGG | - | chr6_4:32146750-32146769 | Msa0985550:intron | 35.0% |
AGGTAGTGACAATTATGAAG+TGG | - | chr6_4:32147110-32147129 | Msa0985550:intron | 35.0% | |
TTGTAAAAAGTGGCAGTAAG+CGG | - | chr6_4:32147236-32147255 | Msa0985550:intron | 35.0% | |
AAATGGGAGAAACCATTGAT+TGG | - | chr6_4:32147547-32147566 | Msa0985550:five_prime_UTR | 35.0% | |
! | AATGGGAGAAACCATTGATT+GGG | - | chr6_4:32147548-32147567 | Msa0985550:five_prime_UTR | 35.0% |
TAAATAAACCCCCCAATCAA+TGG | + | chr6_4:32147562-32147581 | None:intergenic | 35.0% | |
! | TTCAGGTGATGATGAAAGAG+GGG | - | chr6_4:32144230-32144249 | Msa0985550:three_prime_UTR | 40.0% |
TAGTAGAAATGAAGAGGGTG+TGG | - | chr6_4:32144260-32144279 | Msa0985550:three_prime_UTR | 40.0% | |
CAAGTGTTAAAGGTCCCTTA+TGG | - | chr6_4:32144373-32144392 | Msa0985550:three_prime_UTR | 40.0% | |
CCTTGAAACTTCATCCCATA+AGG | + | chr6_4:32144391-32144410 | None:intergenic | 40.0% | |
CCTTATGGGATGAAGTTTCA+AGG | - | chr6_4:32144388-32144407 | Msa0985550:three_prime_UTR | 40.0% | |
ATGGGTAACTGAAATAAGGG+AGG | + | chr6_4:32145001-32145020 | None:intergenic | 40.0% | |
AAGAGAACCAAAGAAGGAAG+AGG | - | chr6_4:32145518-32145537 | Msa0985550:CDS | 40.0% | |
TTTACCACCTCTTCCTTCTT+TGG | + | chr6_4:32145528-32145547 | None:intergenic | 40.0% | |
!! | GCATTGAAGGGTTGTTTTCA+AGG | + | chr6_4:32145592-32145611 | None:intergenic | 40.0% |
GAAGGTGATTGATGCATTGA+AGG | + | chr6_4:32145605-32145624 | None:intergenic | 40.0% | |
GTTTGTGTTTGTGTTTGTGG+TGG | + | chr6_4:32145641-32145660 | None:intergenic | 40.0% | |
GGTGTTTGTGTTTGTGTTTG+TGG | + | chr6_4:32145644-32145663 | None:intergenic | 40.0% | |
GGTGTAGAGTTTAACAATGG+AGG | + | chr6_4:32145716-32145735 | None:intergenic | 40.0% | |
!! | AAGTGTAGTTGATGGAACAG+TGG | + | chr6_4:32145747-32145766 | None:intergenic | 40.0% |
! | GGAATTGGAAGTGTAGTTGA+TGG | + | chr6_4:32145755-32145774 | None:intergenic | 40.0% |
!! | GGTATTGGTGGAAAATGTGT+AGG | + | chr6_4:32145800-32145819 | None:intergenic | 40.0% |
!! | GTTGTTGATGATGGTATTGG+TGG | + | chr6_4:32145812-32145831 | None:intergenic | 40.0% |
! | GGGGGTGTAATAGTAATTTG+AGG | + | chr6_4:32145869-32145888 | None:intergenic | 40.0% |
ATTAGCGAATGAAGATGGTG+GGG | + | chr6_4:32145888-32145907 | None:intergenic | 40.0% | |
AAGTTCGTCTTCGACTTCTT+CGG | - | chr6_4:32145934-32145953 | Msa0985550:CDS | 40.0% | |
AGGAAACGACAACAATGGAA+GGG | - | chr6_4:32145957-32145976 | Msa0985550:CDS | 40.0% | |
! | CTTTGAGAGACTAATGAAGG+AGG | - | chr6_4:32146021-32146040 | Msa0985550:CDS | 40.0% |
GAGAAAAGAGAAAGAGAGAG+AGG | - | chr6_4:32146091-32146110 | Msa0985550:CDS | 40.0% | |
! | GTGTTGTTGTTCAATACAGG+AGG | + | chr6_4:32146265-32146284 | None:intergenic | 40.0% |
!! | ACGGTGTTGTTGTTCAATAC+AGG | + | chr6_4:32146268-32146287 | None:intergenic | 40.0% |
!! | GCTGGTATTAGTATTGGCAA+TGG | + | chr6_4:32146391-32146410 | None:intergenic | 40.0% |
!! | GTTGGAGTTTGAACTTGTTG+CGG | + | chr6_4:32146424-32146443 | None:intergenic | 40.0% |
TGTTGTTGCACTGTTACAGT+TGG | + | chr6_4:32146442-32146461 | None:intergenic | 40.0% | |
GTTGCGAAAAGTGACAACAA+TGG | - | chr6_4:32146559-32146578 | Msa0985550:intron | 40.0% | |
TGATGCATGCAAGTTCATCT+AGG | - | chr6_4:32146590-32146609 | Msa0985550:intron | 40.0% | |
! | AATGCCTCAACCTCAGTTTT+TGG | + | chr6_4:32146619-32146638 | None:intergenic | 40.0% |
! | CAAAGAGGTGCAAAGAGAAA+TGG | - | chr6_4:32146749-32146768 | Msa0985550:intron | 40.0% |
TGAAGGAAAGCAACAAGAAG+AGG | - | chr6_4:32146800-32146819 | Msa0985550:intron | 40.0% | |
GGACATGTCTTTGAATCTTC+TGG | + | chr6_4:32146826-32146845 | None:intergenic | 40.0% | |
!! | GCATCAAGTTGGTGAAAGTA+AGG | + | chr6_4:32146847-32146866 | None:intergenic | 40.0% |
ACCAACTTGATGCTCTATAC+AGG | - | chr6_4:32146854-32146873 | Msa0985550:intron | 40.0% | |
TCTATACAGGCAGAAGAACA+AGG | - | chr6_4:32146867-32146886 | Msa0985550:intron | 40.0% | |
CTGAGAATGCTGAGAATCAT+CGG | - | chr6_4:32147022-32147041 | Msa0985550:intron | 40.0% | |
! | TTGCTCCTCTTTTATTGAGG+TGG | + | chr6_4:32147153-32147172 | None:intergenic | 40.0% |
CAATCATTGAATGAGGCTCT+AGG | - | chr6_4:32147187-32147206 | Msa0985550:intron | 40.0% | |
! | GCATGGACTGTTGTAAAAAG+TGG | - | chr6_4:32147226-32147245 | Msa0985550:intron | 40.0% |
! | ATGGGAGAAACCATTGATTG+GGG | - | chr6_4:32147549-32147568 | Msa0985550:five_prime_UTR | 40.0% |
ACTCCTATGCAGCTATGCTA+GGG | - | chr6_4:32144127-32144146 | Msa0985550:three_prime_UTR | 45.0% | |
! | TCAGGTGATGATGAAAGAGG+GGG | - | chr6_4:32144231-32144250 | Msa0985550:three_prime_UTR | 45.0% |
!! | GAGGGTGTGGATAGAAGTTT+TGG | - | chr6_4:32144273-32144292 | Msa0985550:three_prime_UTR | 45.0% |
!! | GGTGTGGATAGAAGTTTTGG+TGG | - | chr6_4:32144276-32144295 | Msa0985550:three_prime_UTR | 45.0% |
! | CAGATTTCTGAAGGTGGCAT+TGG | + | chr6_4:32144468-32144487 | None:intergenic | 45.0% |
CAATGCCACCTTCAGAAATC+TGG | - | chr6_4:32144466-32144485 | Msa0985550:three_prime_UTR | 45.0% | |
AGAACCAAAGAAGGAAGAGG+TGG | - | chr6_4:32145521-32145540 | Msa0985550:CDS | 45.0% | |
GGAAGAGGTGGTAAATCAGA+TGG | - | chr6_4:32145533-32145552 | Msa0985550:CDS | 45.0% | |
TGTGTTTGTGTTTGTGGTGG+TGG | + | chr6_4:32145638-32145657 | None:intergenic | 45.0% | |
GGGGTGGGAATAGTACTAAT+GGG | + | chr6_4:32145665-32145684 | None:intergenic | 45.0% | |
AGGGGTGGGAATAGTACTAA+TGG | + | chr6_4:32145666-32145685 | None:intergenic | 45.0% | |
!! | TGTAGTTGATGGAACAGTGG+TGG | + | chr6_4:32145744-32145763 | None:intergenic | 45.0% |
TGGTGGAAAATGTGTAGGGT+TGG | + | chr6_4:32145795-32145814 | None:intergenic | 45.0% | |
! | TTAGCGAATGAAGATGGTGG+GGG | + | chr6_4:32145887-32145906 | None:intergenic | 45.0% |
TTCGGAGGAAACGACAACAA+TGG | - | chr6_4:32145952-32145971 | Msa0985550:CDS | 45.0% | |
GAGGAAACGACAACAATGGA+AGG | - | chr6_4:32145956-32145975 | Msa0985550:CDS | 45.0% | |
GGAAACGACAACAATGGAAG+GGG | - | chr6_4:32145958-32145977 | Msa0985550:CDS | 45.0% | |
GAAACGACAACAATGGAAGG+GGG | - | chr6_4:32145959-32145978 | Msa0985550:CDS | 45.0% | |
GAAGAGGAAGAGGAAATGGA+AGG | - | chr6_4:32145994-32146013 | Msa0985550:CDS | 45.0% | |
GGAGGTTGTTGAGAAACAAG+AGG | - | chr6_4:32146039-32146058 | Msa0985550:CDS | 45.0% | |
AACAAGAGGAGTTGCACAAG+AGG | - | chr6_4:32146053-32146072 | Msa0985550:CDS | 45.0% | |
!! | AGTATTGGCAATGGTACTGC+TGG | + | chr6_4:32146382-32146401 | None:intergenic | 45.0% |
!! | GTTTGAACTTGTTGCGGTGT+AGG | + | chr6_4:32146418-32146437 | None:intergenic | 45.0% |
AGTGCAACAACAAACAGCAC+CGG | - | chr6_4:32146450-32146469 | Msa0985550:intron | 45.0% | |
ACAGCAGCAAGTGACGAATA+TGG | - | chr6_4:32146534-32146553 | Msa0985550:intron | 45.0% | |
TGCATGCAAGTTCATCTAGG+TGG | - | chr6_4:32146593-32146612 | Msa0985550:intron | 45.0% | |
ATCTAGGTGGCCAAAAACTG+AGG | - | chr6_4:32146606-32146625 | Msa0985550:intron | 45.0% | |
! | GCCCTTTAGGTCCATTTTCT+TGG | + | chr6_4:32146675-32146694 | None:intergenic | 45.0% |
ATGGACCTAAAGGGCCATTA+TGG | - | chr6_4:32146680-32146699 | Msa0985550:intron | 45.0% | |
TGGACCTAAAGGGCCATTAT+GGG | - | chr6_4:32146681-32146700 | Msa0985550:intron | 45.0% | |
CCTGAAATCTCCTCCCATAA+TGG | + | chr6_4:32146697-32146716 | None:intergenic | 45.0% | |
CCATTATGGGAGGAGATTTC+AGG | - | chr6_4:32146694-32146713 | Msa0985550:intron | 45.0% | |
! | GCCTGTATAGAGCATCAAGT+TGG | + | chr6_4:32146858-32146877 | None:intergenic | 45.0% |
ATACAGGCAGAAGAACAAGG+TGG | - | chr6_4:32146870-32146889 | Msa0985550:intron | 45.0% | |
TATTCTTCCTCATCTCGACG+CGG | + | chr6_4:32147048-32147067 | None:intergenic | 45.0% | |
!! | CTCTTTTATTGAGGTGGTGG+TGG | + | chr6_4:32147147-32147166 | None:intergenic | 45.0% |
CACCACCACCTCAATAAAAG+AGG | - | chr6_4:32147145-32147164 | Msa0985550:intron | 45.0% | |
! | CTCCTCTTTTATTGAGGTGG+TGG | + | chr6_4:32147150-32147169 | None:intergenic | 45.0% |
!! | TCATTGAATGAGGCTCTAGG+TGG | - | chr6_4:32147190-32147209 | Msa0985550:intron | 45.0% |
!! | CATTGAATGAGGCTCTAGGT+GGG | - | chr6_4:32147191-32147210 | Msa0985550:intron | 45.0% |
!! | ATTGAATGAGGCTCTAGGTG+GGG | - | chr6_4:32147192-32147211 | Msa0985550:intron | 45.0% |
! | CAACAGTCCATGCACTCTTT+TGG | + | chr6_4:32147219-32147238 | None:intergenic | 45.0% |
TAAAAAGTGGCAGTAAGCGG+CGG | - | chr6_4:32147239-32147258 | Msa0985550:intron | 45.0% | |
! | TGGGAGAAACCATTGATTGG+GGG | - | chr6_4:32147550-32147569 | Msa0985550:five_prime_UTR | 45.0% |
!! | GAAAAATTAAATTAATAAAT+GGG | + | chr6_4:32144570-32144589 | None:intergenic | 5.0% |
!! | TGAAAAATTAAATTAATAAA+TGG | + | chr6_4:32144571-32144590 | None:intergenic | 5.0% |
CACTCCTATGCAGCTATGCT+AGG | - | chr6_4:32144126-32144145 | Msa0985550:three_prime_UTR | 50.0% | |
CTCCTATGCAGCTATGCTAG+GGG | - | chr6_4:32144128-32144147 | Msa0985550:three_prime_UTR | 50.0% | |
CTAGGGGACTCAACAGTGTT+GGG | - | chr6_4:32144144-32144163 | Msa0985550:three_prime_UTR | 50.0% | |
! | GACTCAACAGTGTTGGGAAC+AGG | - | chr6_4:32144150-32144169 | Msa0985550:three_prime_UTR | 50.0% |
! | TCAACAGTGTTGGGAACAGG+AGG | - | chr6_4:32144153-32144172 | Msa0985550:three_prime_UTR | 50.0% |
TTGATCCACCACCACCATCA+TGG | + | chr6_4:32144209-32144228 | None:intergenic | 50.0% | |
!! | GGTGGTGGTGGATCAATTTC+AGG | - | chr6_4:32144213-32144232 | Msa0985550:three_prime_UTR | 50.0% |
!! | GGTGGTGGTGGTGTTATTGA+AGG | + | chr6_4:32145623-32145642 | None:intergenic | 50.0% |
!! | GTTTGTGTTTGTGGTGGTGG+TGG | + | chr6_4:32145635-32145654 | None:intergenic | 50.0% |
GAAGCTGTTGTTGTAGGGGT+GGG | + | chr6_4:32145680-32145699 | None:intergenic | 50.0% | |
TGAAGCTGTTGTTGTAGGGG+TGG | + | chr6_4:32145681-32145700 | None:intergenic | 50.0% | |
GATGGAACAGTGGTGGTAAG+AGG | + | chr6_4:32145737-32145756 | None:intergenic | 50.0% | |
TTCGTCTTCGACTTCTTCGG+AGG | - | chr6_4:32145937-32145956 | Msa0985550:CDS | 50.0% | |
GACGGAAGAGGAAGAGGAAA+TGG | - | chr6_4:32145990-32146009 | Msa0985550:CDS | 50.0% | |
GGAGTTGCACAAGAGGTTCT+TGG | - | chr6_4:32146060-32146079 | Msa0985550:CDS | 50.0% | |
! | GAGGTGCTAGAGAAGAAGCT+TGG | - | chr6_4:32146110-32146129 | Msa0985550:CDS | 50.0% |
GTGCTAGAGAAGAAGCTTGG+AGG | - | chr6_4:32146113-32146132 | Msa0985550:CDS | 50.0% | |
GGAGGTTGCAAGAGATGCAA+AGG | - | chr6_4:32146131-32146150 | Msa0985550:CDS | 50.0% | |
! | TGTTGCGGTGTAGGTATTGC+TGG | + | chr6_4:32146409-32146428 | None:intergenic | 50.0% |
TGCTGCTGATGTTGTGGCAA+CGG | + | chr6_4:32146493-32146512 | None:intergenic | 50.0% | |
TGTTGCTGCTGCTGATGTTG+TGG | + | chr6_4:32146499-32146518 | None:intergenic | 50.0% | |
ACATCAGCAGCAGCAACAAC+AGG | - | chr6_4:32146501-32146520 | Msa0985550:intron | 50.0% | |
GTGGCCAAAAACTGAGGTTG+AGG | - | chr6_4:32146612-32146631 | Msa0985550:intron | 50.0% | |
ACCTAAAGGGCCATTATGGG+AGG | - | chr6_4:32146684-32146703 | Msa0985550:intron | 50.0% | |
TCCTCCCATAATGGCCCTTT+AGG | + | chr6_4:32146688-32146707 | None:intergenic | 50.0% | |
AGGCAGAAGAACAAGGTGGA+GGG | - | chr6_4:32146874-32146893 | Msa0985550:intron | 50.0% | |
! | AACGATGATGGCACCGTTGA+TGG | - | chr6_4:32146924-32146943 | Msa0985550:intron | 50.0% |
AGCATTCTCAGCATCCTCCA+TGG | + | chr6_4:32147013-32147032 | None:intergenic | 50.0% | |
!! | TGATGACGGTGATGATGACG+AGG | - | chr6_4:32147077-32147096 | Msa0985550:intron | 50.0% |
GATGACGAGGACGAAGATGA+AGG | - | chr6_4:32147090-32147109 | Msa0985550:intron | 50.0% | |
!! | TTGAGGTGGTGGTGGTTTGT+TGG | + | chr6_4:32147139-32147158 | None:intergenic | 50.0% |
!! | TTGAATGAGGCTCTAGGTGG+GGG | - | chr6_4:32147193-32147212 | Msa0985550:intron | 50.0% |
! | GGGAGAAACCATTGATTGGG+GGG | - | chr6_4:32147551-32147570 | Msa0985550:five_prime_UTR | 50.0% |
GTCCCCTAGCATAGCTGCAT+AGG | + | chr6_4:32144133-32144152 | None:intergenic | 55.0% | |
GCTAGGGGACTCAACAGTGT+TGG | - | chr6_4:32144143-32144162 | Msa0985550:three_prime_UTR | 55.0% | |
! | ACAGTGTTGGGAACAGGAGG+AGG | - | chr6_4:32144156-32144175 | Msa0985550:three_prime_UTR | 55.0% |
GGAGCAGGAGCTTACCATGA+TGG | - | chr6_4:32144192-32144211 | Msa0985550:three_prime_UTR | 55.0% | |
GCAGGAGCTTACCATGATGG+TGG | - | chr6_4:32144195-32144214 | Msa0985550:three_prime_UTR | 55.0% | |
!! | GGAGCTTACCATGATGGTGG+TGG | - | chr6_4:32144198-32144217 | Msa0985550:three_prime_UTR | 55.0% |
!! | GCTTACCATGATGGTGGTGG+TGG | - | chr6_4:32144201-32144220 | Msa0985550:three_prime_UTR | 55.0% |
! | GGTGATGATGAAAGAGGGGG+TGG | - | chr6_4:32144234-32144253 | Msa0985550:three_prime_UTR | 55.0% |
TGGAAGGGGGATCGAATCGA+CGG | - | chr6_4:32145972-32145991 | Msa0985550:CDS | 55.0% | |
CGAATCGACGGAAGAGGAAG+AGG | - | chr6_4:32145984-32146003 | Msa0985550:CDS | 55.0% | |
!! | TGCGGCGCTTGTTGTTGTTG+AGG | + | chr6_4:32146295-32146314 | None:intergenic | 55.0% |
! | TCAACAACAACAAGCGCCGC+AGG | - | chr6_4:32146294-32146313 | Msa0985550:intron | 55.0% |
!! | GGGGTTGGTGTAGTTTCCTG+CGG | + | chr6_4:32146313-32146332 | None:intergenic | 55.0% |
!! | TCGGTGTCGGTGTTGGTGTT+GGG | + | chr6_4:32146333-32146352 | None:intergenic | 55.0% |
!! | AATGGTGCTGCTGCTGGTGT+CGG | + | chr6_4:32146352-32146371 | None:intergenic | 55.0% |
!! | GGTACTGCTGGTACTGGCAA+TGG | + | chr6_4:32146370-32146389 | None:intergenic | 55.0% |
GGCAATGGTACTGCTGGTAC+TGG | + | chr6_4:32146376-32146395 | None:intergenic | 55.0% | |
!! | AACAGCACCGGTCATTCCTC+AGG | - | chr6_4:32146462-32146481 | Msa0985550:intron | 55.0% |
GCAGCAGCAACAACAGGTTC+AGG | - | chr6_4:32146507-32146526 | Msa0985550:intron | 55.0% | |
CAGGCAGAAGAACAAGGTGG+AGG | - | chr6_4:32146873-32146892 | Msa0985550:intron | 55.0% | |
TGCTCCGGCTGAACCATCAA+CGG | + | chr6_4:32146940-32146959 | None:intergenic | 55.0% | |
GCAATGGCCTCCACAACAAC+AGG | - | chr6_4:32146960-32146979 | Msa0985550:intron | 55.0% | |
AACGACACCGGCAACATTGG+TGG | - | chr6_4:32147263-32147282 | Msa0985550:intron | 55.0% | |
! | ACACCGGCAACATTGGTGGT+AGG | - | chr6_4:32147267-32147286 | Msa0985550:CDS | 55.0% |
CCACCTACCACCAATGTTGC+CGG | + | chr6_4:32147273-32147292 | None:intergenic | 55.0% | |
! | GCAACATTGGTGGTAGGTGG+TGG | - | chr6_4:32147273-32147292 | Msa0985550:CDS | 55.0% |
! | ACATTGGTGGTAGGTGGTGG+TGG | - | chr6_4:32147276-32147295 | Msa0985550:CDS | 55.0% |
! | CATAGGGGTAGAAGGGTGTG+AGG | - | chr6_4:32147323-32147342 | Msa0985550:CDS | 55.0% |
GGAACAGGAGGAGGAAGCTC+AGG | - | chr6_4:32144165-32144184 | Msa0985550:three_prime_UTR | 60.0% | |
GGAGGAGGAAGCTCAGGAGA+TGG | - | chr6_4:32144171-32144190 | Msa0985550:three_prime_UTR | 60.0% | |
GGAAGCTCAGGAGATGGAGC+AGG | - | chr6_4:32144177-32144196 | Msa0985550:three_prime_UTR | 60.0% | |
GGGGATCGAATCGACGGAAG+AGG | - | chr6_4:32145978-32145997 | Msa0985550:CDS | 60.0% | |
!! | GTCGGTGTTGGTGTTGGGGT+TGG | + | chr6_4:32146328-32146347 | None:intergenic | 60.0% |
!! | CGGTGTCGGTGTTGGTGTTG+GGG | + | chr6_4:32146332-32146351 | None:intergenic | 60.0% |
!! | GTCGGTGTCGGTGTTGGTGT+TGG | + | chr6_4:32146334-32146353 | None:intergenic | 60.0% |
!! | ACTGGCAATGGTGCTGCTGC+TGG | + | chr6_4:32146358-32146377 | None:intergenic | 60.0% |
GGCGAAGCCTGAGGAATGAC+CGG | + | chr6_4:32146472-32146491 | None:intergenic | 60.0% | |
GAGGCCTGAGGGAACGATGA+TGG | - | chr6_4:32146912-32146931 | Msa0985550:intron | 60.0% | |
! | GGTGCCATCATCGTTCCCTC+AGG | + | chr6_4:32146919-32146938 | None:intergenic | 60.0% |
!! | GGCACCGTTGATGGTTCAGC+CGG | - | chr6_4:32146933-32146952 | Msa0985550:intron | 60.0% |
TGGTTCAGCCGGAGCAGCAA+TGG | - | chr6_4:32146944-32146963 | Msa0985550:intron | 60.0% | |
TGTGGAGGCCATTGCTGCTC+CGG | + | chr6_4:32146955-32146974 | None:intergenic | 60.0% | |
! | GTGGGGGCCAAAAGAGTGCA+TGG | - | chr6_4:32147209-32147228 | Msa0985550:intron | 60.0% |
GGCAACGACACCGGCAACAT+TGG | - | chr6_4:32147260-32147279 | Msa0985550:intron | 60.0% | |
! | CCGGCAACATTGGTGGTAGG+TGG | - | chr6_4:32147270-32147289 | Msa0985550:CDS | 60.0% |
!! | GCTGGTGTCGGTGTCGGTGT+TGG | + | chr6_4:32146340-32146359 | None:intergenic | 65.0% |
!! | GCTGCTGCTGGTGTCGGTGT+CGG | + | chr6_4:32146346-32146365 | None:intergenic | 65.0% |
TGTGGCAACGGCGAAGCCTG+AGG | + | chr6_4:32146481-32146500 | None:intergenic | 65.0% | |
GGTGGCGCCTGTTGTTGTGG+AGG | + | chr6_4:32146970-32146989 | None:intergenic | 65.0% | |
! | GCTGGTGGCGCCTGTTGTTG+TGG | + | chr6_4:32146973-32146992 | None:intergenic | 65.0% |
AGCCAGGGCGGATGTGACCA+TGG | - | chr6_4:32146993-32147012 | Msa0985550:intron | 65.0% | |
CTCCATGGTCACATCCGCCC+TGG | + | chr6_4:32146998-32147017 | None:intergenic | 65.0% | |
CAGGGCGGATGTGACCATGG+AGG | - | chr6_4:32146996-32147015 | Msa0985550:intron | 65.0% | |
TCATCGGCCGCGTCGAGATG+AGG | - | chr6_4:32147038-32147057 | Msa0985550:intron | 65.0% | |
GTAAGCGGCGGCAACGACAC+CGG | - | chr6_4:32147251-32147270 | Msa0985550:intron | 65.0% | |
AGGGTGCAGCTGCTGCGTCG+AGG | - | chr6_4:32146893-32146912 | Msa0985550:intron | 70.0% | |
AGCTGCTGCGTCGAGGCCTG+AGG | - | chr6_4:32146900-32146919 | Msa0985550:intron | 70.0% | |
GCTGCTGCGTCGAGGCCTGA+GGG | - | chr6_4:32146901-32146920 | Msa0985550:intron | 70.0% | |
AACAGGCGCCACCAGCAGCC+AGG | - | chr6_4:32146977-32146996 | Msa0985550:intron | 70.0% | |
ACAGGCGCCACCAGCAGCCA+GGG | - | chr6_4:32146978-32146997 | Msa0985550:intron | 70.0% | |
ACATCCGCCCTGGCTGCTGG+TGG | + | chr6_4:32146988-32147007 | None:intergenic | 70.0% | |
GTCACATCCGCCCTGGCTGC+TGG | + | chr6_4:32146991-32147010 | None:intergenic | 70.0% | |
! | GGCGCCACCAGCAGCCAGGG+CGG | - | chr6_4:32146981-32147000 | Msa0985550:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 32144019 | 32147656 | 32144019 | ID=Msa0985550;Name=Msa0985550 |
chr6_4 | mRNA | 32144019 | 32147656 | 32144019 | ID=Msa0985550-mRNA-1;Parent=Msa0985550;Name=Msa0985550-mRNA-1;_AED=0.00;_eAED=0.00;_QI=122|1|1|1|1|1|2|495|662 |
chr6_4 | exon | 32144019 | 32146233 | 32144019 | ID=Msa0985550-mRNA-1:exon:8576;Parent=Msa0985550-mRNA-1 |
chr6_4 | exon | 32147266 | 32147656 | 32147266 | ID=Msa0985550-mRNA-1:exon:8575;Parent=Msa0985550-mRNA-1 |
chr6_4 | five_prime_UTR | 32147535 | 32147656 | 32147535 | ID=Msa0985550-mRNA-1:five_prime_utr;Parent=Msa0985550-mRNA-1 |
chr6_4 | CDS | 32147266 | 32147534 | 32147266 | ID=Msa0985550-mRNA-1:cds;Parent=Msa0985550-mRNA-1 |
chr6_4 | CDS | 32144514 | 32146233 | 32144514 | ID=Msa0985550-mRNA-1:cds;Parent=Msa0985550-mRNA-1 |
chr6_4 | three_prime_UTR | 32144019 | 32144513 | 32144019 | ID=Msa0985550-mRNA-1:three_prime_utr;Parent=Msa0985550-mRNA-1 |
Gene Sequence |
Protein sequence |