Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560180 | XP_003608443.2 | 97.904 | 334 | 7 | 0 | 4 | 337 | 202 | 535 | 0.0 | 676 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560180 | sp|P47924|RIBA1_ARATH | 87.619 | 315 | 39 | 0 | 3 | 317 | 215 | 529 | 0.0 | 588 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560180 | A0A396IAS6 | 97.904 | 334 | 7 | 0 | 4 | 337 | 202 | 535 | 0.0 | 676 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001950 | Msa0560180 | 0.855841 | 4.811199e-62 | -8.615850e-47 |
Msa0003470 | Msa0560180 | 0.841455 | 4.703579e-58 | -8.615850e-47 |
Msa0005360 | Msa0560180 | 0.834262 | 3.318357e-56 | -8.615850e-47 |
Msa0008850 | Msa0560180 | 0.816566 | 5.176942e-52 | -8.615850e-47 |
Msa0011720 | Msa0560180 | 0.802523 | 5.389031e-49 | -8.615850e-47 |
Msa0017120 | Msa0560180 | 0.845858 | 3.123482e-59 | -8.615850e-47 |
Msa0017940 | Msa0560180 | 0.852618 | 4.100886e-61 | -8.615850e-47 |
Msa0024680 | Msa0560180 | 0.812540 | 4.028046e-51 | -8.615850e-47 |
Msa0027540 | Msa0560180 | 0.833791 | 4.354019e-56 | -8.615850e-47 |
Msa0030000 | Msa0560180 | 0.817730 | 2.833514e-52 | -8.615850e-47 |
Msa0030310 | Msa0560180 | 0.819430 | 1.166389e-52 | -8.615850e-47 |
Msa0032400 | Msa0560180 | 0.802588 | 5.225342e-49 | -8.615850e-47 |
Msa0043960 | Msa0560180 | -0.805095 | 1.575090e-49 | -8.615850e-47 |
Msa0044050 | Msa0560180 | -0.801011 | 1.101137e-48 | -8.615850e-47 |
Msa0047470 | Msa0560180 | 0.812963 | 3.253929e-51 | -8.615850e-47 |
Msa0048020 | Msa0560180 | 0.827903 | 1.209677e-54 | -8.615850e-47 |
Msa0050570 | Msa0560180 | 0.839349 | 1.671423e-57 | -8.615850e-47 |
Msa0050580 | Msa0560180 | 0.832427 | 9.513849e-56 | -8.615850e-47 |
Msa0053880 | Msa0560180 | 0.806937 | 6.452775e-50 | -8.615850e-47 |
Msa0058020 | Msa0560180 | 0.805457 | 1.322552e-49 | -8.615850e-47 |
Msa0060350 | Msa0560180 | 0.815520 | 8.865139e-52 | -8.615850e-47 |
Msa0065390 | Msa0560180 | 0.845514 | 3.873624e-59 | -8.615850e-47 |
Msa0075310 | Msa0560180 | 0.835233 | 1.890703e-56 | -8.615850e-47 |
Msa0079250 | Msa0560180 | 0.829284 | 5.611647e-55 | -8.615850e-47 |
Msa0082820 | Msa0560180 | 0.822176 | 2.725234e-53 | -8.615850e-47 |
Msa0084680 | Msa0560180 | 0.821397 | 4.127223e-53 | -8.615850e-47 |
Msa0090620 | Msa0560180 | -0.809016 | 2.330391e-50 | -8.615850e-47 |
Msa0092660 | Msa0560180 | 0.803129 | 4.038816e-49 | -8.615850e-47 |
Msa0092730 | Msa0560180 | 0.803942 | 2.740363e-49 | -8.615850e-47 |
Msa0097980 | Msa0560180 | 0.826289 | 2.944539e-54 | -8.615850e-47 |
Msa0099720 | Msa0560180 | 0.818707 | 1.703121e-52 | -8.615850e-47 |
Msa0102410 | Msa0560180 | 0.814991 | 1.162050e-51 | -8.615850e-47 |
Msa0104420 | Msa0560180 | 0.811335 | 7.372308e-51 | -8.615850e-47 |
Msa0110710 | Msa0560180 | 0.843658 | 1.223513e-58 | -8.615850e-47 |
Msa0120330 | Msa0560180 | 0.801336 | 9.449757e-49 | -8.615850e-47 |
Msa0125230 | Msa0560180 | 0.825742 | 3.969885e-54 | -8.615850e-47 |
Msa0135980 | Msa0560180 | 0.807971 | 3.894838e-50 | -8.615850e-47 |
Msa0141430 | Msa0560180 | 0.828854 | 7.133430e-55 | -8.615850e-47 |
Msa0141670 | Msa0560180 | 0.815421 | 9.326858e-52 | -8.615850e-47 |
Msa0141830 | Msa0560180 | 0.854098 | 1.542949e-61 | -8.615850e-47 |
Msa0143080 | Msa0560180 | 0.841490 | 4.604089e-58 | -8.615850e-47 |
Msa0143970 | Msa0560180 | 0.834699 | 2.577389e-56 | -8.615850e-47 |
Msa0143980 | Msa0560180 | 0.803928 | 2.758592e-49 | -8.615850e-47 |
Msa0146020 | Msa0560180 | 0.804683 | 1.920573e-49 | -8.615850e-47 |
Msa0146470 | Msa0560180 | 0.836009 | 1.202952e-56 | -8.615850e-47 |
Msa0151690 | Msa0560180 | 0.814926 | 1.201400e-51 | -8.615850e-47 |
Msa0157020 | Msa0560180 | 0.846465 | 2.135746e-59 | -8.615850e-47 |
Msa0157350 | Msa0560180 | 0.813219 | 2.859843e-51 | -8.615850e-47 |
Msa0162030 | Msa0560180 | 0.818302 | 2.104633e-52 | -8.615850e-47 |
Msa0162050 | Msa0560180 | 0.820601 | 6.292561e-53 | -8.615850e-47 |
Msa0162070 | Msa0560180 | 0.804666 | 1.935880e-49 | -8.615850e-47 |
Msa0168100 | Msa0560180 | 0.826627 | 2.445487e-54 | -8.615850e-47 |
Msa0172350 | Msa0560180 | 0.816105 | 6.562836e-52 | -8.615850e-47 |
Msa0178940 | Msa0560180 | 0.800587 | 1.344183e-48 | -8.615850e-47 |
Msa0183610 | Msa0560180 | 0.816949 | 4.247191e-52 | -8.615850e-47 |
Msa0183620 | Msa0560180 | 0.820734 | 5.865483e-53 | -8.615850e-47 |
Msa0185390 | Msa0560180 | 0.831775 | 1.378565e-55 | -8.615850e-47 |
Msa0185550 | Msa0560180 | 0.807506 | 4.889791e-50 | -8.615850e-47 |
Msa0194970 | Msa0560180 | 0.816022 | 6.849452e-52 | -8.615850e-47 |
Msa0207000 | Msa0560180 | 0.823977 | 1.035732e-53 | -8.615850e-47 |
Msa0222070 | Msa0560180 | 0.821328 | 4.281478e-53 | -8.615850e-47 |
Msa0222120 | Msa0560180 | 0.819736 | 9.931033e-53 | -8.615850e-47 |
Msa0223390 | Msa0560180 | 0.800278 | 1.553134e-48 | -8.615850e-47 |
Msa0224960 | Msa0560180 | 0.818076 | 2.366559e-52 | -8.615850e-47 |
Msa0225010 | Msa0560180 | 0.818826 | 1.600629e-52 | -8.615850e-47 |
Msa0236980 | Msa0560180 | 0.824018 | 1.013284e-53 | -8.615850e-47 |
Msa0377560 | Msa0560180 | 0.812953 | 3.271134e-51 | -8.615850e-47 |
Msa0377630 | Msa0560180 | 0.805442 | 1.332555e-49 | -8.615850e-47 |
Msa0380420 | Msa0560180 | 0.815845 | 7.503855e-52 | -8.615850e-47 |
Msa0388720 | Msa0560180 | 0.819020 | 1.446130e-52 | -8.615850e-47 |
Msa0399180 | Msa0560180 | 0.800098 | 1.690145e-48 | -8.615850e-47 |
Msa0417150 | Msa0560180 | 0.813712 | 2.227348e-51 | -8.615850e-47 |
Msa0417630 | Msa0560180 | 0.844754 | 6.215197e-59 | -8.615850e-47 |
Msa0421800 | Msa0560180 | 0.847904 | 8.606369e-60 | -8.615850e-47 |
Msa0423110 | Msa0560180 | 0.826438 | 2.712748e-54 | -8.615850e-47 |
Msa0426730 | Msa0560180 | 0.814778 | 1.295751e-51 | -8.615850e-47 |
Msa0427590 | Msa0560180 | 0.821424 | 4.068250e-53 | -8.615850e-47 |
Msa0432680 | Msa0560180 | 0.801002 | 1.105715e-48 | -8.615850e-47 |
Msa0434630 | Msa0560180 | 0.807544 | 4.800338e-50 | -8.615850e-47 |
Msa0467800 | Msa0560180 | 0.850020 | 2.224354e-60 | -8.615850e-47 |
Msa0467880 | Msa0560180 | 0.853112 | 2.963948e-61 | -8.615850e-47 |
Msa0473450 | Msa0560180 | 0.805365 | 1.382894e-49 | -8.615850e-47 |
Msa0476150 | Msa0560180 | 0.811597 | 6.466924e-51 | -8.615850e-47 |
Msa0476180 | Msa0560180 | 0.817415 | 3.336688e-52 | -8.615850e-47 |
Msa0482680 | Msa0560180 | 0.820564 | 6.418841e-53 | -8.615850e-47 |
Msa0239660 | Msa0560180 | 0.826312 | 2.907345e-54 | -8.615850e-47 |
Msa0246690 | Msa0560180 | 0.810327 | 1.218223e-50 | -8.615850e-47 |
Msa0259330 | Msa0560180 | 0.830772 | 2.432748e-55 | -8.615850e-47 |
Msa0259460 | Msa0560180 | 0.805034 | 1.622322e-49 | -8.615850e-47 |
Msa0259560 | Msa0560180 | 0.829832 | 4.127594e-55 | -8.615850e-47 |
Msa0259980 | Msa0560180 | 0.800405 | 1.463613e-48 | -8.615850e-47 |
Msa0263620 | Msa0560180 | 0.819730 | 9.959386e-53 | -8.615850e-47 |
Msa0267760 | Msa0560180 | 0.821211 | 4.554326e-53 | -8.615850e-47 |
Msa0277530 | Msa0560180 | 0.855283 | 6.997946e-62 | -8.615850e-47 |
Msa0277640 | Msa0560180 | 0.810323 | 1.220285e-50 | -8.615850e-47 |
Msa0278620 | Msa0560180 | 0.840453 | 8.619060e-58 | -8.615850e-47 |
Msa0280140 | Msa0560180 | 0.819828 | 9.459345e-53 | -8.615850e-47 |
Msa0304870 | Msa0560180 | 0.813323 | 2.712517e-51 | -8.615850e-47 |
Msa0306130 | Msa0560180 | 0.830793 | 2.404346e-55 | -8.615850e-47 |
Msa0317260 | Msa0560180 | 0.832765 | 7.844286e-56 | -8.615850e-47 |
Msa0318000 | Msa0560180 | 0.845592 | 3.687968e-59 | -8.615850e-47 |
Msa0328210 | Msa0560180 | 0.817898 | 2.597010e-52 | -8.615850e-47 |
Msa0339860 | Msa0560180 | 0.812076 | 5.085256e-51 | -8.615850e-47 |
Msa0341260 | Msa0560180 | 0.811459 | 6.926752e-51 | -8.615850e-47 |
Msa0486570 | Msa0560180 | 0.809741 | 1.628488e-50 | -8.615850e-47 |
Msa0486860 | Msa0560180 | 0.805682 | 1.186390e-49 | -8.615850e-47 |
Msa0509540 | Msa0560180 | 0.805418 | 1.348037e-49 | -8.615850e-47 |
Msa0511890 | Msa0560180 | 0.801523 | 8.648466e-49 | -8.615850e-47 |
Msa0514260 | Msa0560180 | 0.846620 | 1.937755e-59 | -8.615850e-47 |
Msa0514990 | Msa0560180 | 0.805920 | 1.057318e-49 | -8.615850e-47 |
Msa0518160 | Msa0560180 | 0.818524 | 1.873636e-52 | -8.615850e-47 |
Msa0519200 | Msa0560180 | 0.818170 | 2.254254e-52 | -8.615850e-47 |
Msa0520320 | Msa0560180 | 0.802141 | 6.459562e-49 | -8.615850e-47 |
Msa0524090 | Msa0560180 | 0.820822 | 5.598014e-53 | -8.615850e-47 |
Msa0524120 | Msa0560180 | 0.829985 | 3.789305e-55 | -8.615850e-47 |
Msa0526700 | Msa0560180 | 0.814490 | 1.500701e-51 | -8.615850e-47 |
Msa0526710 | Msa0560180 | 0.813269 | 2.787831e-51 | -8.615850e-47 |
Msa0527590 | Msa0560180 | 0.836336 | 9.935137e-57 | -8.615850e-47 |
Msa0530210 | Msa0560180 | 0.821667 | 3.574100e-53 | -8.615850e-47 |
Msa0542040 | Msa0560180 | 0.840023 | 1.116301e-57 | -8.615850e-47 |
Msa0546380 | Msa0560180 | 0.825410 | 4.759486e-54 | -8.615850e-47 |
Msa0546740 | Msa0560180 | 0.833307 | 5.750884e-56 | -8.615850e-47 |
Msa0546840 | Msa0560180 | 0.822883 | 1.866825e-53 | -8.615850e-47 |
Msa0547050 | Msa0560180 | 0.841354 | 5.000460e-58 | -8.615850e-47 |
Msa0558890 | Msa0560180 | 0.835627 | 1.502766e-56 | -8.615850e-47 |
Msa0560180 | Msa0567290 | 0.800746 | 1.247190e-48 | -8.615850e-47 |
Msa0560180 | Msa0576420 | 0.822514 | 2.274785e-53 | -8.615850e-47 |
Msa0560180 | Msa0579610 | 0.802244 | 6.151102e-49 | -8.615850e-47 |
Msa0560180 | Msa0581460 | 0.852669 | 3.967366e-61 | -8.615850e-47 |
Msa0560180 | Msa0582620 | 0.806938 | 6.451722e-50 | -8.615850e-47 |
Msa0560180 | Msa0582900 | 0.806274 | 8.906239e-50 | -8.615850e-47 |
Msa0560180 | Msa0583930 | 0.826439 | 2.710874e-54 | -8.615850e-47 |
Msa0560180 | Msa0583940 | 0.816349 | 5.788321e-52 | -8.615850e-47 |
Msa0560180 | Msa0601780 | 0.814360 | 1.603061e-51 | -8.615850e-47 |
Msa0560180 | Msa0607300 | 0.805237 | 1.470592e-49 | -8.615850e-47 |
Msa0560180 | Msa0614210 | 0.900062 | 1.066246e-77 | -8.615850e-47 |
Msa0560180 | Msa0614230 | 0.830297 | 3.178805e-55 | -8.615850e-47 |
Msa0560180 | Msa0619330 | 0.811743 | 6.008707e-51 | -8.615850e-47 |
Msa0560180 | Msa0620090 | 0.822763 | 1.990523e-53 | -8.615850e-47 |
Msa0560180 | Msa0622390 | 0.800632 | 1.316049e-48 | -8.615850e-47 |
Msa0560180 | Msa0637850 | 0.815239 | 1.023646e-51 | -8.615850e-47 |
Msa0560180 | Msa0638690 | 0.956214 | 4.997741e-114 | -8.615850e-47 |
Msa0560180 | Msa0640880 | 0.802756 | 4.823718e-49 | -8.615850e-47 |
Msa0560180 | Msa0642650 | 0.840929 | 6.466823e-58 | -8.615850e-47 |
Msa0560180 | Msa0642910 | 0.819036 | 1.433990e-52 | -8.615850e-47 |
Msa0560180 | Msa0647110 | 0.810583 | 1.072216e-50 | -8.615850e-47 |
Msa0560180 | Msa0653710 | 0.801759 | 7.737967e-49 | -8.615850e-47 |
Msa0560180 | Msa0654060 | 0.829280 | 5.622996e-55 | -8.615850e-47 |
Msa0560180 | Msa0659040 | 0.826404 | 2.763579e-54 | -8.615850e-47 |
Msa0560180 | Msa0659960 | 0.810895 | 9.180900e-51 | -8.615850e-47 |
Msa0560180 | Msa0662850 | 0.813432 | 2.566914e-51 | -8.615850e-47 |
Msa0560180 | Msa0669200 | 0.848274 | 6.805020e-60 | -8.615850e-47 |
Msa0560180 | Msa0681890 | 0.863323 | 2.701453e-64 | -8.615850e-47 |
Msa0560180 | Msa0686610 | 0.801767 | 7.709945e-49 | -8.615850e-47 |
Msa0560180 | Msa0690720 | 0.800469 | 1.420527e-48 | -8.615850e-47 |
Msa0560180 | Msa0697400 | 0.892354 | 1.714736e-74 | -8.615850e-47 |
Msa0560180 | Msa0703590 | 0.820699 | 5.975973e-53 | -8.615850e-47 |
Msa0560180 | Msa0703720 | 0.836748 | 7.800260e-57 | -8.615850e-47 |
Msa0560180 | Msa0703760 | 0.832072 | 1.164198e-55 | -8.615850e-47 |
Msa0560180 | Msa0704990 | 0.850085 | 2.132760e-60 | -8.615850e-47 |
Msa0560180 | Msa0705030 | 0.843919 | 1.042060e-58 | -8.615850e-47 |
Msa0560180 | Msa0706530 | 0.801005 | 1.104405e-48 | -8.615850e-47 |
Msa0560180 | Msa0707780 | 0.819112 | 1.377985e-52 | -8.615850e-47 |
Msa0560180 | Msa0709190 | 0.820442 | 6.844549e-53 | -8.615850e-47 |
Msa0560180 | Msa0709480 | 0.852893 | 3.423472e-61 | -8.615850e-47 |
Msa0560180 | Msa0717090 | 0.874883 | 4.766835e-68 | -8.615850e-47 |
Msa0560180 | Msa0717510 | 0.809378 | 1.949064e-50 | -8.615850e-47 |
Msa0560180 | Msa0724050 | 0.822525 | 2.261198e-53 | -8.615850e-47 |
Msa0560180 | Msa0725920 | 0.835050 | 2.102293e-56 | -8.615850e-47 |
Msa0560180 | Msa0726610 | 0.806212 | 9.178547e-50 | -8.615850e-47 |
Msa0560180 | Msa0730180 | 0.840268 | 9.630612e-58 | -8.615850e-47 |
Msa0560180 | Msa0739570 | 0.829030 | 6.466064e-55 | -8.615850e-47 |
Msa0560180 | Msa0748930 | 0.801804 | 7.573711e-49 | -8.615850e-47 |
Msa0560180 | Msa0763880 | 0.836234 | 1.054450e-56 | -8.615850e-47 |
Msa0560180 | Msa0763910 | 0.847743 | 9.533034e-60 | -8.615850e-47 |
Msa0560180 | Msa0766470 | 0.826049 | 3.357597e-54 | -8.615850e-47 |
Msa0560180 | Msa0770430 | 0.818189 | 2.232295e-52 | -8.615850e-47 |
Msa0560180 | Msa0775090 | 0.809978 | 1.448236e-50 | -8.615850e-47 |
Msa0560180 | Msa0775260 | 0.819671 | 1.027606e-52 | -8.615850e-47 |
Msa0560180 | Msa0782330 | 0.847958 | 8.317347e-60 | -8.615850e-47 |
Msa0560180 | Msa0790830 | 0.838983 | 2.078612e-57 | -8.615850e-47 |
Msa0560180 | Msa0797220 | 0.854948 | 8.756822e-62 | -8.615850e-47 |
Msa0560180 | Msa0803130 | 0.824369 | 8.378970e-54 | -8.615850e-47 |
Msa0560180 | Msa0812450 | 0.835676 | 1.460660e-56 | -8.615850e-47 |
Msa0560180 | Msa0841490 | 0.825489 | 4.559041e-54 | -8.615850e-47 |
Msa0560180 | Msa0844100 | 0.843676 | 1.210138e-58 | -8.615850e-47 |
Msa0560180 | Msa0846030 | 0.805469 | 1.315210e-49 | -8.615850e-47 |
Msa0560180 | Msa0852730 | 0.834433 | 3.006720e-56 | -8.615850e-47 |
Msa0560180 | Msa0853170 | 0.810764 | 9.800099e-51 | -8.615850e-47 |
Msa0560180 | Msa0860270 | 0.826845 | 2.168951e-54 | -8.615850e-47 |
Msa0560180 | Msa0863440 | 0.807572 | 4.733415e-50 | -8.615850e-47 |
Msa0560180 | Msa0872660 | 0.820497 | 6.648805e-53 | -8.615850e-47 |
Msa0560180 | Msa0877420 | 0.831802 | 1.358002e-55 | -8.615850e-47 |
Msa0560180 | Msa0890250 | 0.822111 | 2.820970e-53 | -8.615850e-47 |
Msa0560180 | Msa0900320 | 0.859795 | 3.230574e-63 | -8.615850e-47 |
Msa0560180 | Msa0901100 | 0.807521 | 4.853814e-50 | -8.615850e-47 |
Msa0560180 | Msa0907700 | 0.829736 | 4.355897e-55 | -8.615850e-47 |
Msa0560180 | Msa0925160 | 0.849426 | 3.258582e-60 | -8.615850e-47 |
Msa0560180 | Msa0934830 | 0.805382 | 1.371177e-49 | -8.615850e-47 |
Msa0560180 | Msa0942730 | 0.807660 | 4.535957e-50 | -8.615850e-47 |
Msa0560180 | Msa0952950 | 0.807083 | 6.011641e-50 | -8.615850e-47 |
Msa0560180 | Msa0955260 | 0.837670 | 4.532634e-57 | -8.615850e-47 |
Msa0560180 | Msa0958020 | 0.842276 | 2.854387e-58 | -8.615850e-47 |
Msa0560180 | Msa0965960 | 0.857506 | 1.558000e-62 | -8.615850e-47 |
Msa0560180 | Msa0971860 | 0.827022 | 1.967416e-54 | -8.615850e-47 |
Msa0560180 | Msa0972730 | 0.829217 | 5.822885e-55 | -8.615850e-47 |
Msa0560180 | Msa0975080 | 0.818561 | 1.838286e-52 | -8.615850e-47 |
Msa0560180 | Msa0978000 | 0.834902 | 2.290910e-56 | -8.615850e-47 |
Msa0560180 | Msa0979550 | 0.837253 | 5.797170e-57 | -8.615850e-47 |
Msa0560180 | Msa0983710 | 0.803126 | 4.044925e-49 | -8.615850e-47 |
Msa0560180 | Msa0990520 | 0.844084 | 9.409556e-59 | -8.615850e-47 |
Msa0560180 | Msa0992570 | 0.833203 | 6.104219e-56 | -8.615850e-47 |
Msa0560180 | Msa0992590 | 0.833122 | 6.392594e-56 | -8.615850e-47 |
Msa0560180 | Msa1000470 | 0.822369 | 2.458227e-53 | -8.615850e-47 |
Msa0560180 | Msa1002040 | 0.845834 | 3.170926e-59 | -8.615850e-47 |
Msa0560180 | Msa1015060 | 0.815535 | 8.796729e-52 | -8.615850e-47 |
Msa0560180 | Msa1024580 | 0.832550 | 8.866746e-56 | -8.615850e-47 |
Msa0560180 | Msa1032140 | 0.817209 | 3.713627e-52 | -8.615850e-47 |
Msa0560180 | Msa1038320 | 0.820060 | 8.372238e-53 | -8.615850e-47 |
Msa0560180 | Msa1044340 | 0.810898 | 9.165335e-51 | -8.615850e-47 |
Msa0560180 | Msa1067430 | 0.814466 | 1.519103e-51 | -8.615850e-47 |
Msa0560180 | Msa1070900 | 0.810085 | 1.373777e-50 | -8.615850e-47 |
Msa0560180 | Msa1072080 | 0.842405 | 2.637792e-58 | -8.615850e-47 |
Msa0560180 | Msa1084490 | 0.820389 | 7.039447e-53 | -8.615850e-47 |
Msa0560180 | Msa1086060 | 0.804605 | 1.993392e-49 | -8.615850e-47 |
Msa0560180 | Msa1089530 | 0.845013 | 5.291189e-59 | -8.615850e-47 |
Msa0560180 | Msa1102180 | 0.801119 | 1.046586e-48 | -8.615850e-47 |
Msa0560180 | Msa1122160 | 0.838276 | 3.166640e-57 | -8.615850e-47 |
Msa0560180 | Msa1123340 | 0.827158 | 1.825596e-54 | -8.615850e-47 |
Msa0560180 | Msa1125780 | 0.833925 | 4.028877e-56 | -8.615850e-47 |
Msa0560180 | Msa1125950 | 0.838164 | 3.384313e-57 | -8.615850e-47 |
Msa0560180 | Msa1132520 | 0.819559 | 1.089965e-52 | -8.615850e-47 |
Msa0560180 | Msa1154670 | 0.800155 | 1.645252e-48 | -8.615850e-47 |
Msa0560180 | Msa1157160 | 0.816678 | 4.886748e-52 | -8.615850e-47 |
Msa0560180 | Msa1159100 | 0.855660 | 5.436581e-62 | -8.615850e-47 |
Msa0560180 | Msa1160570 | 0.833946 | 3.982366e-56 | -8.615850e-47 |
Msa0560180 | Msa1166180 | 0.851335 | 9.490579e-61 | -8.615850e-47 |
Msa0560180 | Msa1166280 | 0.846654 | 1.896751e-59 | -8.615850e-47 |
Msa0560180 | Msa1171340 | 0.848253 | 6.895007e-60 | -8.615850e-47 |
Msa0560180 | Msa1183610 | 0.839082 | 1.960330e-57 | -8.615850e-47 |
Msa0560180 | Msa1183760 | 0.810576 | 1.075975e-50 | -8.615850e-47 |
Msa0560180 | Msa1190910 | 0.817993 | 2.471958e-52 | -8.615850e-47 |
Msa0560180 | Msa1210770 | 0.805783 | 1.129942e-49 | -8.615850e-47 |
Msa0560180 | Msa1214900 | 0.811078 | 8.379660e-51 | -8.615850e-47 |
Msa0560180 | Msa1215210 | 0.880333 | 5.986107e-70 | -8.615850e-47 |
Msa0560180 | Msa1215530 | 0.815885 | 7.350121e-52 | -8.615850e-47 |
Msa0560180 | Msa1219250 | 0.800948 | 1.134155e-48 | -8.615850e-47 |
Msa0560180 | Msa1223160 | -0.812094 | 5.039486e-51 | -8.615850e-47 |
Msa0560180 | Msa1223840 | 0.805103 | 1.569267e-49 | -8.615850e-47 |
Msa0560180 | Msa1228950 | 0.805280 | 1.440350e-49 | -8.615850e-47 |
Msa0560180 | Msa1237030 | 0.842103 | 3.172405e-58 | -8.615850e-47 |
Msa0560180 | Msa1238410 | 0.800491 | 1.406139e-48 | -8.615850e-47 |
Msa0560180 | Msa1259470 | 0.800610 | 1.329238e-48 | -8.615850e-47 |
Msa0560180 | Msa1265070 | 0.818579 | 1.821043e-52 | -8.615850e-47 |
Msa0560180 | Msa1271510 | 0.806811 | 6.861131e-50 | -8.615850e-47 |
Msa0560180 | Msa1271600 | 0.824374 | 8.357287e-54 | -8.615850e-47 |
Msa0560180 | Msa1280120 | 0.801476 | 8.845678e-49 | -8.615850e-47 |
Msa0560180 | Msa1284520 | 0.802313 | 5.953473e-49 | -8.615850e-47 |
Msa0560180 | Msa1293530 | 0.819744 | 9.888783e-53 | -8.615850e-47 |
Msa0560180 | Msa1315980 | 0.812137 | 4.930866e-51 | -8.615850e-47 |
Msa0560180 | Msa1323060 | 0.801257 | 9.804706e-49 | -8.615850e-47 |
Msa0560180 | Msa1325980 | 0.812745 | 3.633054e-51 | -8.615850e-47 |
Msa0560180 | Msa1327820 | 0.815015 | 1.147673e-51 | -8.615850e-47 |
Msa0560180 | Msa1337730 | 0.807222 | 5.615290e-50 | -8.615850e-47 |
Msa0560180 | Msa1352290 | 0.819873 | 9.242089e-53 | -8.615850e-47 |
Msa0560180 | Msa1362510 | 0.802070 | 6.678151e-49 | -8.615850e-47 |
Msa0560180 | Msa1367600 | 0.806715 | 7.190130e-50 | -8.615850e-47 |
Msa0560180 | Msa1367940 | 0.824096 | 9.710527e-54 | -8.615850e-47 |
Msa0560180 | Msa1368730 | 0.817080 | 3.969108e-52 | -8.615850e-47 |
Msa0560180 | Msa1372560 | 0.812660 | 3.792166e-51 | -8.615850e-47 |
Msa0560180 | Msa1373510 | 0.803874 | 2.831043e-49 | -8.615850e-47 |
Msa0560180 | Msa1374810 | 0.808628 | 2.820884e-50 | -8.615850e-47 |
Msa0560180 | Msa1375630 | 0.814760 | 1.307211e-51 | -8.615850e-47 |
Msa0560180 | Msa1376530 | 0.822522 | 2.264249e-53 | -8.615850e-47 |
Msa0560180 | Msa1376640 | 0.830407 | 2.989154e-55 | -8.615850e-47 |
Msa0560180 | Msa1381130 | 0.830087 | 3.576941e-55 | -8.615850e-47 |
Msa0560180 | Msa1382310 | 0.841092 | 5.860185e-58 | -8.615850e-47 |
Msa0560180 | Msa1390310 | 0.815185 | 1.052403e-51 | -8.615850e-47 |
Msa0560180 | Msa1390770 | 0.836189 | 1.082718e-56 | -8.615850e-47 |
Msa0560180 | Msa1405770 | 0.805896 | 1.069720e-49 | -8.615850e-47 |
Msa0560180 | Msa1406230 | 0.805226 | 1.478622e-49 | -8.615850e-47 |
Msa0560180 | Msa1407710 | 0.800569 | 1.355589e-48 | -8.615850e-47 |
Msa0560180 | Msa1410170 | 0.828328 | 9.554175e-55 | -8.615850e-47 |
Msa0560180 | Msa1412080 | 0.847131 | 1.403961e-59 | -8.615850e-47 |
Msa0560180 | Msa1415250 | 0.801030 | 1.091390e-48 | -8.615850e-47 |
Msa0560180 | Msa1419850 | 0.825773 | 3.904198e-54 | -8.615850e-47 |
Msa0560180 | Msa1422750 | 0.817167 | 3.795096e-52 | -8.615850e-47 |
Msa0560180 | Msa1423550 | 0.812215 | 4.743460e-51 | -8.615850e-47 |
Msa0560180 | Msa1426290 | 0.800438 | 1.441350e-48 | -8.615850e-47 |
Msa0560180 | Msa1431960 | 0.804063 | 2.586244e-49 | -8.615850e-47 |
Msa0560180 | Msa1432640 | 0.825268 | 5.142905e-54 | -8.615850e-47 |
Msa0560180 | Msa1434020 | 0.801239 | 9.890379e-49 | -8.615850e-47 |
Msa0560180 | Msa1435470 | 0.849436 | 3.238371e-60 | -8.615850e-47 |
Msa0560180 | Msa1435910 | 0.818522 | 1.875738e-52 | -8.615850e-47 |
Msa0560180 | Msa1440180 | 0.802575 | 5.256685e-49 | -8.615850e-47 |
Msa0560180 | Msa1442300 | 0.821772 | 3.380577e-53 | -8.615850e-47 |
Msa0560180 | Msa1444450 | 0.848421 | 6.197517e-60 | -8.615850e-47 |
Msa0560180 | Msa1447230 | 0.828700 | 7.770844e-55 | -8.615850e-47 |
Msa0560180 | Msa1449740 | 0.800885 | 1.168349e-48 | -8.615850e-47 |
Msa0560180 | Msa1451840 | 0.809522 | 1.814881e-50 | -8.615850e-47 |
Msa0560180 | Msa1458920 | 0.830041 | 3.670614e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560180 | MtrunA17_Chr4g0050151 | 97.904 | 334 | 7 | 0 | 4 | 337 | 202 | 535 | 0.0 | 676 |
Msa0560180 | MtrunA17_Chr2g0279401 | 84.132 | 334 | 52 | 1 | 3 | 336 | 208 | 540 | 0.0 | 597 |
Msa0560180 | MtrunA17_Chr2g0327771 | 72.115 | 312 | 86 | 1 | 4 | 314 | 193 | 504 | 7.68e-168 | 477 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560180 | AT5G64300.1 | 87.619 | 315 | 39 | 0 | 3 | 317 | 215 | 529 | 0.0 | 588 |
Msa0560180 | AT5G59750.1 | 71.474 | 312 | 88 | 1 | 3 | 313 | 188 | 499 | 4.38e-168 | 478 |
Msa0560180 | AT5G59750.2 | 71.474 | 312 | 88 | 1 | 3 | 313 | 222 | 533 | 9.91e-168 | 478 |
Msa0560180 | AT2G22450.1 | 71.724 | 290 | 74 | 2 | 3 | 292 | 193 | 474 | 8.20e-151 | 433 |
Msa0560180 | AT5G59750.3 | 71.654 | 254 | 71 | 1 | 3 | 255 | 188 | 441 | 2.24e-132 | 385 |
Find 185 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGTTTGGGGAATAGGATTT+AGG | 0.160264 | 4_1:+59429135 | None:intergenic |
GGAAACCAAACGTGTGAAAA+TGG | 0.179642 | 4_1:-59424092 | Msa0560180:CDS |
ACCTGTGGTGGTACCATATT+TGG | 0.201373 | 4_1:+59427280 | None:intergenic |
TATCTATTGCTGACTTAATA+AGG | 0.228563 | 4_1:-59426983 | Msa0560180:intron |
GGTTATGGTTTGTCCATTTC+AGG | 0.231937 | 4_1:-59424163 | Msa0560180:CDS |
AGAGAAGAAGCCATTTAGTT+TGG | 0.270647 | 4_1:+59429120 | None:intergenic |
ACATAATTTGTGTATCTTAC+AGG | 0.271505 | 4_1:+59423972 | None:intergenic |
TTATTTATTTATTGAGAGTT+TGG | 0.288189 | 4_1:+59429175 | None:intergenic |
GTTGATCTTGCAGTACTTGC+TGG | 0.298152 | 4_1:-59427110 | Msa0560180:CDS |
AGTTTGGGGAATAGGATTTA+GGG | 0.303586 | 4_1:+59429136 | None:intergenic |
ATCCTATTCCCCAAACTAAA+TGG | 0.305424 | 4_1:-59429130 | Msa0560180:five_prime_UTR |
GAGAAGAAGCCATTTAGTTT+GGG | 0.305528 | 4_1:+59429121 | None:intergenic |
GTACCTTGTATAAGTGATTA+AGG | 0.322113 | 4_1:-59423618 | Msa0560180:three_prime_UTR |
TGTCTCACAGGAGACATATT+TGG | 0.327946 | 4_1:-59424677 | Msa0560180:CDS |
GAGATTAGAGCTTCCTTTGA+TGG | 0.335212 | 4_1:-59427759 | Msa0560180:five_prime_UTR |
AGCCATTTAGTTTGGGGAAT+AGG | 0.335852 | 4_1:+59429128 | None:intergenic |
CATTCACAGCTAACTGTTAT+AGG | 0.336467 | 4_1:-59425975 | Msa0560180:CDS |
CAATGGGATCCTACCTGAAA+TGG | 0.346472 | 4_1:+59424150 | None:intergenic |
AAAATTTCAAATTGCTCAAT+GGG | 0.352317 | 4_1:-59428348 | Msa0560180:five_prime_UTR |
ACTGGAATCATCAATATTAC+TGG | 0.361001 | 4_1:+59424024 | None:intergenic |
GGATAGGGCAGCCACAGTTT+TGG | 0.367511 | 4_1:-59427246 | Msa0560180:CDS |
CGTTCTGTGTTGTGTTGGAT+TGG | 0.373220 | 4_1:+59429207 | None:intergenic |
TCTTGCAGTACTTGCTGGTT+TGG | 0.375590 | 4_1:-59427105 | Msa0560180:CDS |
TATGTTGGGCTCAAAGGTTA+TGG | 0.393304 | 4_1:-59424178 | Msa0560180:CDS |
GATTTAGGGTTTGAATGAAA+TGG | 0.395767 | 4_1:+59429150 | None:intergenic |
CCTGTTGACTCAAGGGAGTA+TGG | 0.400777 | 4_1:-59424464 | Msa0560180:CDS |
GGACATGAAGGAAGGGGTAT+TGG | 0.405006 | 4_1:-59424566 | Msa0560180:CDS |
TTATTTAACAGGGTGACATT+GGG | 0.414280 | 4_1:-59424736 | Msa0560180:intron |
AAATTGCTCAATGGGTTTAA+CGG | 0.418543 | 4_1:-59428340 | Msa0560180:five_prime_UTR |
ATTGGTCTGGCAGGTATAGA+AGG | 0.425872 | 4_1:-59426056 | Msa0560180:intron |
GCTCAGATTTGGCATTTGTT+CGG | 0.426151 | 4_1:-59428288 | Msa0560180:five_prime_UTR |
TCCTTTGATGGTCAACAGTC+GGG | 0.426635 | 4_1:-59427747 | Msa0560180:five_prime_UTR |
GTTAAAGCTGCGTTGACCTC+TGG | 0.428144 | 4_1:-59428223 | Msa0560180:five_prime_UTR |
TTTATTGTGAAGCACGGAAC+TGG | 0.428836 | 4_1:-59427818 | Msa0560180:five_prime_UTR |
AATAAATCACAAGTAGAATC+AGG | 0.432760 | 4_1:+59423880 | None:intergenic |
TCATGTGCGTGGCTCAGATT+TGG | 0.436104 | 4_1:-59428299 | Msa0560180:five_prime_UTR |
GAAGGAAGGGGTATTGGATT+GGG | 0.436773 | 4_1:-59424560 | Msa0560180:CDS |
CCTGGGCGGTTGAAATCACT+TGG | 0.436809 | 4_1:+59427200 | None:intergenic |
CTTATTTAACAGGGTGACAT+TGG | 0.437054 | 4_1:-59424737 | Msa0560180:intron |
TTATGTGCCAGGAGCAGTAC+TGG | 0.441984 | 4_1:+59424006 | None:intergenic |
TCTAATAATGGCAGCACAGT+TGG | 0.442929 | 4_1:-59427861 | Msa0560180:five_prime_UTR |
TGAAGGAAGGGGTATTGGAT+TGG | 0.444630 | 4_1:-59424561 | Msa0560180:CDS |
TGCGGTAGCGCTTGGAACAC+TGG | 0.448752 | 4_1:-59428146 | Msa0560180:five_prime_UTR |
TTATTTATTGAGAGTTTGGT+TGG | 0.452281 | 4_1:+59429179 | None:intergenic |
CAGGTGTGTCGGCTCAGGAT+AGG | 0.455862 | 4_1:-59427262 | Msa0560180:CDS |
ATTATCTATTACACATTACA+TGG | 0.458016 | 4_1:+59423787 | None:intergenic |
CCATACTCCCTTGAGTCAAC+AGG | 0.462092 | 4_1:+59424464 | None:intergenic |
CACTTATCACAAATGAAAAC+AGG | 0.465466 | 4_1:-59424123 | Msa0560180:CDS |
GAATTTAACAGCAAATTGAA+TGG | 0.466315 | 4_1:-59424052 | Msa0560180:CDS |
CAACTTAATGCGGTAGCGCT+TGG | 0.467840 | 4_1:-59428154 | Msa0560180:five_prime_UTR |
ATAGAATAGGTGAGGGGCTG+AGG | 0.468263 | 4_1:-59423766 | Msa0560180:three_prime_UTR |
TGCTGCGTTCTGTGTTGTGT+TGG | 0.469256 | 4_1:+59429202 | None:intergenic |
GGAGCAGATACAGCTCTAAC+AGG | 0.470368 | 4_1:-59428124 | Msa0560180:five_prime_UTR |
AGGCAATCCCAACTCCTCAT+TGG | 0.470707 | 4_1:+59424484 | None:intergenic |
GCAAAATATGTTGGGCTCAA+AGG | 0.471659 | 4_1:-59424184 | Msa0560180:CDS |
AAACGAAGGAGATCTAATAA+TGG | 0.473118 | 4_1:-59427873 | Msa0560180:five_prime_UTR |
AACAATCCGGCAAAATATGT+TGG | 0.476857 | 4_1:-59424193 | Msa0560180:CDS |
AATTGTAATTGCAGATATTG+AGG | 0.477500 | 4_1:-59424249 | Msa0560180:intron |
TCTGCAAACTGGCGAAGCTT+AGG | 0.478958 | 4_1:+59427026 | None:intergenic |
AGGTGTGTCGGCTCAGGATA+GGG | 0.480451 | 4_1:-59427261 | Msa0560180:CDS |
CTGAGGCTATTGAAGACATT+CGG | 0.487102 | 4_1:-59428033 | Msa0560180:five_prime_UTR |
TGACAGTGGTATGTACAATT+TGG | 0.488249 | 4_1:-59427691 | Msa0560180:intron |
GTGTGACTGCGGAAATCAAT+TGG | 0.489196 | 4_1:-59424645 | Msa0560180:CDS |
AAATGAAAACAGGAGATACT+TGG | 0.489544 | 4_1:-59424113 | Msa0560180:CDS |
GAAACCAAACGTGTGAAAAT+GGG | 0.490915 | 4_1:-59424091 | Msa0560180:CDS |
CAGATTGAGGCTGCTGGCAG+AGG | 0.491152 | 4_1:-59424608 | Msa0560180:CDS |
TGTAGAAGCCAATGAGGAGT+TGG | 0.491158 | 4_1:-59424492 | Msa0560180:CDS |
TGCTTATAACCTACAGGATG+AGG | 0.491407 | 4_1:-59424525 | Msa0560180:CDS |
TGTGTAATAGATAATAGAAT+AGG | 0.492532 | 4_1:-59423779 | Msa0560180:three_prime_UTR |
AAGGAAGCTCTAATCTCTCC+AGG | 0.494013 | 4_1:+59427765 | None:intergenic |
TTGTGATAAGTGATAACAAT+GGG | 0.494880 | 4_1:+59424134 | None:intergenic |
CACCACAGGTGTGTCGGCTC+AGG | 0.495943 | 4_1:-59427267 | Msa0560180:CDS |
GTTGGCAACACCTGAGGCTA+TGG | 0.497594 | 4_1:-59427843 | Msa0560180:five_prime_UTR |
GTGAAAATGGGTCACATGTA+TGG | 0.498935 | 4_1:-59424079 | Msa0560180:CDS |
GCCAAATATGGTACCACCAC+AGG | 0.505213 | 4_1:-59427281 | Msa0560180:CDS |
ACAATCCGGCAAAATATGTT+GGG | 0.506282 | 4_1:-59424192 | Msa0560180:CDS |
CACCCTCTCTCTCGCGTCCA+CGG | 0.507943 | 4_1:-59429086 | Msa0560180:intron |
GACTCAAGGGAGTATGGAAT+TGG | 0.510546 | 4_1:-59424458 | Msa0560180:CDS |
ATTGTAATTGCAGATATTGA+GGG | 0.510691 | 4_1:-59424248 | Msa0560180:intron |
TGGGATTGCCTGTTGACTCA+AGG | 0.511648 | 4_1:-59424472 | Msa0560180:CDS |
TTTAGCGGGAAAATATGGCC+TGG | 0.513539 | 4_1:+59427182 | None:intergenic |
TAAAGGTGCTCTTTGTTGAA+AGG | 0.514646 | 4_1:-59423579 | Msa0560180:three_prime_UTR |
TTAGCGGGAAAATATGGCCT+GGG | 0.516577 | 4_1:+59427183 | None:intergenic |
TTCCTTTGATGGTCAACAGT+CGG | 0.517538 | 4_1:-59427748 | Msa0560180:five_prime_UTR |
GGTGGTATCTTGAAGAGAGC+TGG | 0.518284 | 4_1:-59427149 | Msa0560180:CDS |
ATTGCAGATATTGAGGGACT+TGG | 0.519933 | 4_1:-59424242 | Msa0560180:intron |
CTTTGTTGAAAGGTATCTCG+TGG | 0.520045 | 4_1:-59423569 | Msa0560180:three_prime_UTR |
GTCTTCAATAGCCTCAGGTA+TGG | 0.520814 | 4_1:+59428039 | None:intergenic |
GGTTCAGACAGTCCAACAAA+AGG | 0.521369 | 4_1:-59428070 | Msa0560180:five_prime_UTR |
GGGATTGCCTGTTGACTCAA+GGG | 0.524496 | 4_1:-59424471 | Msa0560180:CDS |
CTATAACAGTTAGCTGTGAA+TGG | 0.526297 | 4_1:+59425976 | None:intergenic |
TCTTGCAATGCAACAGATTG+AGG | 0.526543 | 4_1:-59424621 | Msa0560180:CDS |
GTAGAAGCCAATGAGGAGTT+GGG | 0.529410 | 4_1:-59424491 | Msa0560180:CDS |
TCCCGACTGTTGACCATCAA+AGG | 0.529835 | 4_1:+59427746 | None:intergenic |
TTGATTTCCGCAGTCACACC+TGG | 0.532360 | 4_1:+59424649 | None:intergenic |
AATTTCTATACTGCTTCAGA+TGG | 0.533048 | 4_1:-59423923 | Msa0560180:three_prime_UTR |
TCTGATGATAATGATGACTT+CGG | 0.539827 | 4_1:-59428091 | Msa0560180:five_prime_UTR |
GCGGTAGCGCTTGGAACACT+GGG | 0.540082 | 4_1:-59428145 | Msa0560180:five_prime_UTR |
TGGACGCGAGAGAGAGGGTG+TGG | 0.542232 | 4_1:+59429089 | None:intergenic |
GGCTGCTGGCAGAGGTGTGT+TGG | 0.543552 | 4_1:-59424600 | Msa0560180:CDS |
CATACCACATTGCGACATGA+AGG | 0.544172 | 4_1:+59428250 | None:intergenic |
GGAGCATATTGCGATGGTAA+AGG | 0.544393 | 4_1:-59425935 | Msa0560180:intron |
AAGCATGAAAGAGGAAGACC+TGG | 0.546167 | 4_1:-59427783 | Msa0560180:five_prime_UTR |
CGAATGTCTTCAATAGCCTC+AGG | 0.546934 | 4_1:+59428034 | None:intergenic |
GAAGCTAATGACAAACAATC+CGG | 0.547961 | 4_1:-59424206 | Msa0560180:CDS |
GCTTCGTGCTTATAACCTAC+AGG | 0.549079 | 4_1:-59424531 | Msa0560180:CDS |
TGCACTAATACCAACAATGT+GGG | 0.551549 | 4_1:-59426001 | Msa0560180:CDS |
GATGATTCCAGTACTGCTCC+TGG | 0.554163 | 4_1:-59424013 | Msa0560180:CDS |
ATGGTTTGTCCATTTCAGGT+AGG | 0.561182 | 4_1:-59424159 | Msa0560180:CDS |
ACAATAAAAGCCATAGCCTC+AGG | 0.561239 | 4_1:+59427833 | None:intergenic |
TCTTCGAGGACATGAAGGAA+GGG | 0.561452 | 4_1:-59424573 | Msa0560180:CDS |
ATGGATGTGATGTTCTTGTG+AGG | 0.562152 | 4_1:-59424712 | Msa0560180:CDS |
ATTAGTACTTCAGATGGTAG+TGG | 0.563625 | 4_1:-59427918 | Msa0560180:intron |
ATGCAACAGATTGAGGCTGC+TGG | 0.565430 | 4_1:-59424614 | Msa0560180:CDS |
GAGACATATTTGGATCTGCC+AGG | 0.566429 | 4_1:-59424667 | Msa0560180:CDS |
CCAAGTGATTTCAACCGCCC+AGG | 0.570750 | 4_1:-59427200 | Msa0560180:CDS |
GGAGTATGGAATTGGTGCAC+AGG | 0.571226 | 4_1:-59424450 | Msa0560180:intron |
TAACAGGGTGACATTGGGGA+TGG | 0.572072 | 4_1:-59424731 | Msa0560180:intron |
TTGCAGATATTGAGGGACTT+GGG | 0.572398 | 4_1:-59424241 | Msa0560180:intron |
GCACTAATACCAACAATGTG+GGG | 0.575469 | 4_1:-59426000 | Msa0560180:CDS |
AGTTTGTATAAGCATGAAAG+AGG | 0.575891 | 4_1:-59427792 | Msa0560180:five_prime_UTR |
GGTTATAAGCACGAAGCTTG+TGG | 0.577439 | 4_1:+59424537 | None:intergenic |
ATCTTCGAGGACATGAAGGA+AGG | 0.578424 | 4_1:-59424574 | Msa0560180:CDS |
GCTGCGTTGACCTCTGGAGG+AGG | 0.578530 | 4_1:-59428217 | Msa0560180:five_prime_UTR |
ACCTCACACAGAACTGCCAC+AGG | 0.581651 | 4_1:+59427080 | None:intergenic |
TAGAATAGGTGAGGGGCTGA+GGG | 0.582487 | 4_1:-59423765 | Msa0560180:three_prime_UTR |
TATGTCACAACAGAAGAGGA+AGG | 0.582497 | 4_1:-59423954 | Msa0560180:three_prime_UTR |
AGAAGAAGCCATTTAGTTTG+GGG | 0.582512 | 4_1:+59429122 | None:intergenic |
TACAGCATTCACTGTGACAG+TGG | 0.582981 | 4_1:-59427705 | Msa0560180:five_prime_UTR |
TGACCGTGGACGCGAGAGAG+AGG | 0.584520 | 4_1:+59429083 | None:intergenic |
AATGGGTCACATGTATGGCT+TGG | 0.585495 | 4_1:-59424074 | Msa0560180:CDS |
TGTGAGGTTGTAGATGATGA+TGG | 0.585772 | 4_1:-59427065 | Msa0560180:CDS |
CTTCGAGGACATGAAGGAAG+GGG | 0.588755 | 4_1:-59424572 | Msa0560180:CDS |
AAAGCTGCGTTGACCTCTGG+AGG | 0.591046 | 4_1:-59428220 | Msa0560180:five_prime_UTR |
CTGTCACAGTGAATGCTGTA+CGG | 0.591136 | 4_1:+59427708 | None:intergenic |
ACTTGCTGGTTTGGATCCTG+TGG | 0.591421 | 4_1:-59427096 | Msa0560180:CDS |
ATAGATAATAGAATAGGTGA+GGG | 0.591575 | 4_1:-59423773 | Msa0560180:three_prime_UTR |
TAACCTACAGGATGAGGGAA+GGG | 0.594297 | 4_1:-59424519 | Msa0560180:CDS |
GATACAGCTCTAACAGGCAG+TGG | 0.594402 | 4_1:-59428118 | Msa0560180:five_prime_UTR |
GGTGTGTTGGTATATCTTCG+AGG | 0.595300 | 4_1:-59424587 | Msa0560180:CDS |
GATAAACTAGTGGAACGTGC+TGG | 0.595479 | 4_1:-59426027 | Msa0560180:CDS |
AAGGAAGAGAGATAAACTAG+TGG | 0.595527 | 4_1:-59426037 | Msa0560180:CDS |
GCTATTGAAGACATTCGGAA+TGG | 0.596453 | 4_1:-59428028 | Msa0560180:five_prime_UTR |
TAGTTTCATTATACACGAGT+GGG | 0.596731 | 4_1:-59423654 | Msa0560180:three_prime_UTR |
GACCGTGGACGCGAGAGAGA+GGG | 0.599560 | 4_1:+59429084 | None:intergenic |
TGAAGACATTCGGAATGGAA+AGG | 0.600427 | 4_1:-59428023 | Msa0560180:intron |
AATAGATAATAGAATAGGTG+AGG | 0.601516 | 4_1:-59423774 | Msa0560180:three_prime_UTR |
GCTTATAACCTACAGGATGA+GGG | 0.601860 | 4_1:-59424524 | Msa0560180:CDS |
AAATTATGTCACAACAGAAG+AGG | 0.604340 | 4_1:-59423958 | Msa0560180:three_prime_UTR |
TATTTAACAGGGTGACATTG+GGG | 0.607649 | 4_1:-59424735 | Msa0560180:intron |
TATCCCTTCCCTCATCCTGT+AGG | 0.610379 | 4_1:+59424516 | None:intergenic |
GTACACTCAGAGTGTCTCAC+AGG | 0.612117 | 4_1:-59424689 | Msa0560180:CDS |
ATCCTGAGCCGACACACCTG+TGG | 0.612282 | 4_1:+59427265 | None:intergenic |
GTATATCTTCGAGGACATGA+AGG | 0.613709 | 4_1:-59424578 | Msa0560180:CDS |
ATACCACATTGCGACATGAA+GGG | 0.616657 | 4_1:+59428251 | None:intergenic |
ATGTCACAACAGAAGAGGAA+GGG | 0.617763 | 4_1:-59423953 | Msa0560180:three_prime_UTR |
TCCTGTGGCAGTTCTGTGTG+AGG | 0.618636 | 4_1:-59427081 | Msa0560180:CDS |
CTGCACTAATACCAACAATG+TGG | 0.619531 | 4_1:-59426002 | Msa0560180:CDS |
ATAGTTTCATTATACACGAG+TGG | 0.620861 | 4_1:-59423655 | Msa0560180:three_prime_UTR |
AAGCTTAGGTAATCTAGCCA+TGG | 0.622161 | 4_1:+59427040 | None:intergenic |
ATAACCTACAGGATGAGGGA+AGG | 0.623311 | 4_1:-59424520 | Msa0560180:CDS |
TGGATGTGATGTTCTTGTGA+GGG | 0.626484 | 4_1:-59424711 | Msa0560180:CDS |
TGACTTCTGTAGAAAACTAG+AGG | 0.627964 | 4_1:-59423690 | Msa0560180:three_prime_UTR |
TTCCCGCTAAAATACAGGGA+AGG | 0.631313 | 4_1:-59427170 | Msa0560180:CDS |
TGGTACCACCACAGGTGTGT+CGG | 0.632234 | 4_1:-59427273 | Msa0560180:CDS |
TGTAGATGATGATGGTTCCA+TGG | 0.633135 | 4_1:-59427057 | Msa0560180:CDS |
CCGCTAAAATACAGGGAAGG+TGG | 0.634097 | 4_1:-59427167 | Msa0560180:CDS |
CCGTCTATGATTCATGTGCG+TGG | 0.635896 | 4_1:-59428310 | Msa0560180:five_prime_UTR |
CTGAGCCGACACACCTGTGG+TGG | 0.636032 | 4_1:+59427268 | None:intergenic |
ATGAGAATGCTCAAAGATGT+TGG | 0.637351 | 4_1:+59429230 | None:intergenic |
GCACCTTAATCACTTATACA+AGG | 0.639090 | 4_1:+59423615 | None:intergenic |
AGCACAGTTGGCAACACCTG+AGG | 0.640668 | 4_1:-59427849 | Msa0560180:five_prime_UTR |
CACTAATACCAACAATGTGG+GGG | 0.642333 | 4_1:-59425999 | Msa0560180:CDS |
TGGGATGGAGCATATTGCGA+TGG | 0.648423 | 4_1:-59425941 | Msa0560180:CDS |
CCACGCACATGAATCATAGA+CGG | 0.649929 | 4_1:+59428310 | None:intergenic |
GGATGCAAGGGCCAAAACTG+TGG | 0.663388 | 4_1:+59427235 | None:intergenic |
GACGAGGACAGAGAAAACGA+AGG | 0.678938 | 4_1:-59427887 | Msa0560180:five_prime_UTR |
GGATACTGTAGAAGCCAATG+AGG | 0.679133 | 4_1:-59424498 | Msa0560180:CDS |
TGAATCAGCACAACTTAATG+CGG | 0.679998 | 4_1:-59428164 | Msa0560180:five_prime_UTR |
GCGGGAAAATATGGCCTGGG+CGG | 0.682425 | 4_1:+59427186 | None:intergenic |
GGTAGTGGTTGTAGATGACG+AGG | 0.685375 | 4_1:-59427903 | Msa0560180:five_prime_UTR |
TTTGTGATAAGTGATAACAA+TGG | 0.686821 | 4_1:+59424133 | None:intergenic |
ATTCCCTTCATGTCGCAATG+TGG | 0.695574 | 4_1:-59428254 | Msa0560180:five_prime_UTR |
TAGATAATAGAATAGGTGAG+GGG | 0.707032 | 4_1:-59423772 | Msa0560180:three_prime_UTR |
GGATCTGCCAGGTGTGACTG+CGG | 0.722494 | 4_1:-59424656 | Msa0560180:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTATCTTAATTTTTAGTTA+TGG | - | chr4_1:59423872-59423891 | Msa0560180:three_prime_UTR | 10.0% |
!!! | ATAATAATTTCTTATTTTTG+TGG | - | chr4_1:59424366-59424385 | Msa0560180:intron | 10.0% |
!!! | TAATAATTTCTTATTTTTGT+GGG | - | chr4_1:59424367-59424386 | Msa0560180:intron | 10.0% |
!! | TTTAATAAAATATAACTTTG+TGG | - | chr4_1:59425448-59425467 | Msa0560180:intron | 10.0% |
!! | TCAATATATGATTAAAAAAA+AGG | + | chr4_1:59427097-59427116 | None:intergenic | 10.0% |
!!! | GTTTTTTTTTTATTTTCTTT+AGG | - | chr4_1:59427871-59427890 | Msa0560180:five_prime_UTR | 10.0% |
!! | TTATTTATTTATTGAGAGTT+TGG | + | chr4_1:59423634-59423653 | None:intergenic | 15.0% |
!! | ATTAAAGCAGTTAAAAAATT+GGG | + | chr4_1:59423819-59423838 | None:intergenic | 15.0% |
!! | AATTAAAGCAGTTAAAAAAT+TGG | + | chr4_1:59423820-59423839 | None:intergenic | 15.0% |
!! | AACTAAAAATTAAGATAATC+TGG | + | chr4_1:59423871-59423890 | None:intergenic | 15.0% |
!!! | TTCTCTTTATTTGTATATAA+AGG | - | chr4_1:59426010-59426029 | Msa0560180:CDS | 15.0% |
!!! | TCTCTTTATTTGTATATAAA+GGG | - | chr4_1:59426011-59426030 | Msa0560180:CDS | 15.0% |
!! | TCTATATTGAACTATATATA+TGG | - | chr4_1:59426908-59426927 | Msa0560180:intron | 15.0% |
!!! | TAACTTTGATTTTAACTAAA+TGG | - | chr4_1:59426962-59426981 | Msa0560180:intron | 15.0% |
!! | AAAAAAAACTAAAGAAAGTA+TGG | + | chr4_1:59427203-59427222 | None:intergenic | 15.0% |
!!! | ATTCATTTTGAAAAAATTCA+GGG | + | chr4_1:59427621-59427640 | None:intergenic | 15.0% |
!!! | TATTCATTTTGAAAAAATTC+AGG | + | chr4_1:59427622-59427641 | None:intergenic | 15.0% |
!!! | ATCTTAATTTTTAGTTATGG+TGG | - | chr4_1:59423875-59423894 | Msa0560180:three_prime_UTR | 20.0% |
!!! | GTCATTTTTTAATTTACTAC+CGG | + | chr4_1:59424230-59424249 | None:intergenic | 20.0% |
!! | AAAAATTTCAAATTGCTCAA+TGG | - | chr4_1:59424457-59424476 | Msa0560180:CDS | 20.0% |
!! | AAAATTTCAAATTGCTCAAT+GGG | - | chr4_1:59424458-59424477 | Msa0560180:CDS | 20.0% |
!!! | GGTATTCTATATAAAAGTTT+TGG | - | chr4_1:59424827-59424846 | Msa0560180:intron | 20.0% |
!! | TAAATAATAAAAAGCTCATG+AGG | - | chr4_1:59425971-59425990 | Msa0560180:CDS | 20.0% |
!! | AAATAATAAAAAGCTCATGA+GGG | - | chr4_1:59425972-59425991 | Msa0560180:CDS | 20.0% |
!!! | AATTTTTGAAAGACAAATCA+CGG | + | chr4_1:59426356-59426375 | None:intergenic | 20.0% |
!! | AACTAGAAATTCAATCAATT+TGG | - | chr4_1:59426386-59426405 | Msa0560180:intron | 20.0% |
!!! | TAGGATTTCAATTTTTGTAA+TGG | + | chr4_1:59426529-59426548 | None:intergenic | 20.0% |
!! | ATATAAAGACAAAATAACCA+CGG | + | chr4_1:59426629-59426648 | None:intergenic | 20.0% |
!! | AAAATGAATAGAGAAGAAAA+AGG | - | chr4_1:59427632-59427651 | Msa0560180:intron | 20.0% |
!! | ATGCAAAAATGTTGAAAAAA+GGG | + | chr4_1:59427915-59427934 | None:intergenic | 20.0% |
!! | AATGCAAAAATGTTGAAAAA+AGG | + | chr4_1:59427916-59427935 | None:intergenic | 20.0% |
!!! | ATTTTACTGTATTCAATTCA+TGG | - | chr4_1:59428433-59428452 | Msa0560180:intron | 20.0% |
!! | ATTATCTATTACACATTACA+TGG | + | chr4_1:59429022-59429041 | None:intergenic | 20.0% |
!! | TGTGTAATAGATAATAGAAT+AGG | - | chr4_1:59429027-59429046 | Msa0560180:intron | 20.0% |
! | TTATTTATTGAGAGTTTGGT+TGG | + | chr4_1:59423630-59423649 | None:intergenic | 25.0% |
! | AACAAAACAGATAAGATAAG+AGG | + | chr4_1:59424040-59424059 | None:intergenic | 25.0% |
! | CATCTCCATAAAAGAAAATT+GGG | + | chr4_1:59424129-59424148 | None:intergenic | 25.0% |
!! | CAATTTTCTTTTATGGAGAT+GGG | - | chr4_1:59424128-59424147 | Msa0560180:CDS | 25.0% |
!! | ATTTTTGTGGGAATTATGTT+TGG | - | chr4_1:59424379-59424398 | Msa0560180:intron | 25.0% |
! | TGTCTCTTTCTATTCAATAT+AGG | - | chr4_1:59424428-59424447 | Msa0560180:intron | 25.0% |
! | GTCTCTTTCTATTCAATATA+GGG | - | chr4_1:59424429-59424448 | Msa0560180:intron | 25.0% |
! | GTACTAATGTCAGTTAATAA+CGG | + | chr4_1:59424876-59424895 | None:intergenic | 25.0% |
!!! | TGTTTTAGATGATGTAAGAA+TGG | + | chr4_1:59425195-59425214 | None:intergenic | 25.0% |
!! | ACTTATCAATGCAATTTTGT+AGG | - | chr4_1:59425500-59425519 | Msa0560180:intron | 25.0% |
!!! | TATCTATTGCTGACTTAATA+AGG | - | chr4_1:59425823-59425842 | Msa0560180:intron | 25.0% |
!!! | AGGGTTTTTAAGTAATTAGT+AGG | - | chr4_1:59425901-59425920 | Msa0560180:intron | 25.0% |
!!! | GTTTTTAAGTAATTAGTAGG+TGG | - | chr4_1:59425904-59425923 | Msa0560180:intron | 25.0% |
! | TTATTAGCAAGTTTCTCATT+AGG | - | chr4_1:59425946-59425965 | Msa0560180:CDS | 25.0% |
! | TATTAGCAAGTTTCTCATTA+GGG | - | chr4_1:59425947-59425966 | Msa0560180:CDS | 25.0% |
! | GATGACAATTAAGGAAAATA+GGG | + | chr4_1:59426185-59426204 | None:intergenic | 25.0% |
! | AGATGACAATTAAGGAAAAT+AGG | + | chr4_1:59426186-59426205 | None:intergenic | 25.0% |
! | GAAGAAATAGATGACAATTA+AGG | + | chr4_1:59426194-59426213 | None:intergenic | 25.0% |
! | ACAACAAAAATTGCATACAA+TGG | + | chr4_1:59426267-59426286 | None:intergenic | 25.0% |
!!! | TTGTATGCAATTTTTGTTGT+CGG | - | chr4_1:59426267-59426286 | Msa0560180:intron | 25.0% |
!!! | TCAATCAATTTGGTTTTTTG+TGG | - | chr4_1:59426396-59426415 | Msa0560180:intron | 25.0% |
! | TAATGGAAGATAAACAAGAT+AGG | + | chr4_1:59426548-59426567 | None:intergenic | 25.0% |
! | AAAAATTTAACTGCGCTTAA+AGG | + | chr4_1:59426606-59426625 | None:intergenic | 25.0% |
! | AAATTAGCTAAAGATGAATC+AGG | + | chr4_1:59426673-59426692 | None:intergenic | 25.0% |
! | AAAAGAAACAAAAAGAATCC+AGG | + | chr4_1:59426701-59426720 | None:intergenic | 25.0% |
!!! | GATTCTTTTTGTTTCTTTTC+TGG | - | chr4_1:59426702-59426721 | Msa0560180:intron | 25.0% |
!!! | ATTTATTTTTTTGACAGCCA+CGG | + | chr4_1:59427141-59427160 | None:intergenic | 25.0% |
! | TCATCAAACAAGTTATGTAT+TGG | + | chr4_1:59427317-59427336 | None:intergenic | 25.0% |
!! | GTAAGTAGTTCGATATTTTA+AGG | + | chr4_1:59427411-59427430 | None:intergenic | 25.0% |
! | TGCAAAAATGTTGAAAAAAG+GGG | + | chr4_1:59427914-59427933 | None:intergenic | 25.0% |
!! | TTTCAACATTTTTGCATTCA+AGG | - | chr4_1:59427918-59427937 | Msa0560180:intron | 25.0% |
! | ATTGAAAGGTTCAAGATAAT+TGG | + | chr4_1:59427987-59428006 | None:intergenic | 25.0% |
!! | TTGGACATTTCTTATTTAAC+AGG | - | chr4_1:59428059-59428078 | Msa0560180:five_prime_UTR | 25.0% |
!! | TGGACATTTCTTATTTAACA+GGG | - | chr4_1:59428060-59428079 | Msa0560180:five_prime_UTR | 25.0% |
! | TACATGATTATTAAGTTCAC+TGG | - | chr4_1:59428461-59428480 | Msa0560180:intron | 25.0% |
!! | AACATAGAACTAGATGTTTT+AGG | - | chr4_1:59428501-59428520 | Msa0560180:intron | 25.0% |
! | TTGTGATAAGTGATAACAAT+GGG | + | chr4_1:59428675-59428694 | None:intergenic | 25.0% |
! | TTTGTGATAAGTGATAACAA+TGG | + | chr4_1:59428676-59428695 | None:intergenic | 25.0% |
! | GAATTTAACAGCAAATTGAA+TGG | - | chr4_1:59428754-59428773 | Msa0560180:intron | 25.0% |
!! | ACATAATTTGTGTATCTTAC+AGG | + | chr4_1:59428837-59428856 | None:intergenic | 25.0% |
! | AATAAATCACAAGTAGAATC+AGG | + | chr4_1:59428929-59428948 | None:intergenic | 25.0% |
! | AATAGATAATAGAATAGGTG+AGG | - | chr4_1:59429032-59429051 | Msa0560180:intron | 25.0% |
! | ATAGATAATAGAATAGGTGA+GGG | - | chr4_1:59429033-59429052 | Msa0560180:intron | 25.0% |
! | GATTTAGGGTTTGAATGAAA+TGG | + | chr4_1:59423659-59423678 | None:intergenic | 30.0% |
CAGAAGATAAATGGAAAAGA+AGG | + | chr4_1:59423768-59423787 | None:intergenic | 30.0% | |
TGAAATAGAACCTAAGAAAG+CGG | + | chr4_1:59423794-59423813 | None:intergenic | 30.0% | |
CATAAAAGAAAATTGGGCTA+AGG | + | chr4_1:59424123-59424142 | None:intergenic | 30.0% | |
! | CTTAGCCCAATTTTCTTTTA+TGG | - | chr4_1:59424121-59424140 | Msa0560180:CDS | 30.0% |
CCATCTCCATAAAAGAAAAT+TGG | + | chr4_1:59424130-59424149 | None:intergenic | 30.0% | |
! | CCAATTTTCTTTTATGGAGA+TGG | - | chr4_1:59424127-59424146 | Msa0560180:CDS | 30.0% |
CAAAATTGAATGTAATGTGC+TGG | - | chr4_1:59424249-59424268 | Msa0560180:intron | 30.0% | |
! | AAATTGCTCAATGGGTTTAA+CGG | - | chr4_1:59424466-59424485 | Msa0560180:CDS | 30.0% |
AGACCTAAAAAATGAAGATC+TGG | - | chr4_1:59424612-59424631 | Msa0560180:CDS | 30.0% | |
!!! | CAACCAGATCTTCATTTTTT+AGG | + | chr4_1:59424618-59424637 | None:intergenic | 30.0% |
CTAAAAAATGAAGATCTGGT+TGG | - | chr4_1:59424616-59424635 | Msa0560180:CDS | 30.0% | |
! | TCTGATGATAATGATGACTT+CGG | - | chr4_1:59424715-59424734 | Msa0560180:CDS | 30.0% |
! | GTTAATAACGGAAATCTAAG+TGG | + | chr4_1:59424864-59424883 | None:intergenic | 30.0% |
AAACGAAGGAGATCTAATAA+TGG | - | chr4_1:59424933-59424952 | Msa0560180:intron | 30.0% | |
AGTTTGTATAAGCATGAAAG+AGG | - | chr4_1:59425014-59425033 | Msa0560180:intron | 30.0% | |
GTAAATGTCTGTTACATACT+GGG | + | chr4_1:59425350-59425369 | None:intergenic | 30.0% | |
AGTAAATGTCTGTTACATAC+TGG | + | chr4_1:59425351-59425370 | None:intergenic | 30.0% | |
! | ATTTTGTAGGATGCCAAATA+TGG | - | chr4_1:59425513-59425532 | Msa0560180:intron | 30.0% |
! | TTTTGAATCTTTGGATGCAA+GGG | + | chr4_1:59425586-59425605 | None:intergenic | 30.0% |
!!! | ATCACTTGGTTTTGAATCTT+TGG | + | chr4_1:59425595-59425614 | None:intergenic | 30.0% |
!!! | TGTATTTTAGCGGGAAAATA+TGG | + | chr4_1:59425632-59425651 | None:intergenic | 30.0% |
! | ATATTTTCCCGCTAAAATAC+AGG | - | chr4_1:59425631-59425650 | Msa0560180:intron | 30.0% |
! | TATTTTCCCGCTAAAATACA+GGG | - | chr4_1:59425632-59425651 | Msa0560180:intron | 30.0% |
CTTAAAAACCCTCTCATATT+GGG | + | chr4_1:59425893-59425912 | None:intergenic | 30.0% | |
ACTTAAAAACCCTCTCATAT+TGG | + | chr4_1:59425894-59425913 | None:intergenic | 30.0% | |
GTAATGACAATAGTAGTAGA+GGG | + | chr4_1:59426149-59426168 | None:intergenic | 30.0% | |
AGTAATGACAATAGTAGTAG+AGG | + | chr4_1:59426150-59426169 | None:intergenic | 30.0% | |
!! | TGATAGCAACCTCTAAAATT+AGG | + | chr4_1:59426430-59426449 | None:intergenic | 30.0% |
AGGTAAGGAACAAAAAATAG+AGG | + | chr4_1:59426653-59426672 | None:intergenic | 30.0% | |
! | CTTTAGCTAATTTTTCTTCC+TGG | - | chr4_1:59426680-59426699 | Msa0560180:intron | 30.0% |
!!! | TGTTATAGGTCACTTTTAGA+TGG | - | chr4_1:59426845-59426864 | Msa0560180:intron | 30.0% |
!!! | GTTATAGGTCACTTTTAGAT+GGG | - | chr4_1:59426846-59426865 | Msa0560180:intron | 30.0% |
ATCATATTGCTCTACCATAT+TGG | + | chr4_1:59427010-59427029 | None:intergenic | 30.0% | |
ATAAAAATTGAGTCACATCG+AGG | - | chr4_1:59427167-59427186 | Msa0560180:CDS | 30.0% | |
TAGCTTCTATTCCAAATGTA+GGG | + | chr4_1:59427343-59427362 | None:intergenic | 30.0% | |
TTAGCTTCTATTCCAAATGT+AGG | + | chr4_1:59427344-59427363 | None:intergenic | 30.0% | |
!! | AGAATTTCAAGTTAACTCAC+GGG | + | chr4_1:59427500-59427519 | None:intergenic | 30.0% |
!! | CAGAATTTCAAGTTAACTCA+CGG | + | chr4_1:59427501-59427520 | None:intergenic | 30.0% |
GATCTAGTCATCTTTCTATT+TGG | - | chr4_1:59427768-59427787 | Msa0560180:five_prime_UTR | 30.0% | |
! | AATTCTCGTTGACTGAAATT+GGG | - | chr4_1:59427810-59427829 | Msa0560180:five_prime_UTR | 30.0% |
AAACTGATCTTGTCAGTTAA+AGG | + | chr4_1:59427855-59427874 | None:intergenic | 30.0% | |
TTATTTAACAGGGTGACATT+GGG | - | chr4_1:59428070-59428089 | Msa0560180:five_prime_UTR | 30.0% | |
!! | ACATCTAGTTCTATGTTGTA+TGG | + | chr4_1:59428498-59428517 | None:intergenic | 30.0% |
CACTTATCACAAATGAAAAC+AGG | - | chr4_1:59428683-59428702 | Msa0560180:intron | 30.0% | |
AAATGAAAACAGGAGATACT+TGG | - | chr4_1:59428693-59428712 | Msa0560180:intron | 30.0% | |
ACTGGAATCATCAATATTAC+TGG | + | chr4_1:59428785-59428804 | None:intergenic | 30.0% | |
TGTATCTTACAGGAAAAAAC+AGG | + | chr4_1:59428827-59428846 | None:intergenic | 30.0% | |
AAATTATGTCACAACAGAAG+AGG | - | chr4_1:59428848-59428867 | Msa0560180:intron | 30.0% | |
AATTTCTATACTGCTTCAGA+TGG | - | chr4_1:59428883-59428902 | Msa0560180:intron | 30.0% | |
GAAAAATCGTGCAAATGAAT+TGG | + | chr4_1:59428958-59428977 | None:intergenic | 30.0% | |
TAGATAATAGAATAGGTGAG+GGG | - | chr4_1:59429034-59429053 | Msa0560180:intron | 30.0% | |
ATAGTTTCATTATACACGAG+TGG | - | chr4_1:59429151-59429170 | Msa0560180:five_prime_UTR | 30.0% | |
TAGTTTCATTATACACGAGT+GGG | - | chr4_1:59429152-59429171 | Msa0560180:five_prime_UTR | 30.0% | |
GTACCTTGTATAAGTGATTA+AGG | - | chr4_1:59429188-59429207 | Msa0560180:five_prime_UTR | 30.0% | |
! | GTGCATTTTTGTGACAATAA+AGG | - | chr4_1:59429210-59429229 | Msa0560180:five_prime_UTR | 30.0% |
ATGAGAATGCTCAAAGATGT+TGG | + | chr4_1:59423579-59423598 | None:intergenic | 35.0% | |
AGTTTGGGGAATAGGATTTA+GGG | + | chr4_1:59423673-59423692 | None:intergenic | 35.0% | |
TAGTTTGGGGAATAGGATTT+AGG | + | chr4_1:59423674-59423693 | None:intergenic | 35.0% | |
ATCCTATTCCCCAAACTAAA+TGG | - | chr4_1:59423676-59423695 | Msa0560180:three_prime_UTR | 35.0% | |
!! | AGAAGAAGCCATTTAGTTTG+GGG | + | chr4_1:59423687-59423706 | None:intergenic | 35.0% |
! | GAGAAGAAGCCATTTAGTTT+GGG | + | chr4_1:59423688-59423707 | None:intergenic | 35.0% |
AGAGAAGAAGCCATTTAGTT+TGG | + | chr4_1:59423689-59423708 | None:intergenic | 35.0% | |
GAAAAGAAGGAAGAAAGAGA+AGG | + | chr4_1:59423755-59423774 | None:intergenic | 35.0% | |
AAGCGGTTTCAGAAGATAAA+TGG | + | chr4_1:59423777-59423796 | None:intergenic | 35.0% | |
AGATAAGAGGAACAAAGTTG+TGG | + | chr4_1:59424027-59424046 | None:intergenic | 35.0% | |
GGAAAGTTTAGGTAAAGCTT+TGG | + | chr4_1:59424102-59424121 | None:intergenic | 35.0% | |
AATTGGGCTAAGGAAAGTTT+AGG | + | chr4_1:59424113-59424132 | None:intergenic | 35.0% | |
TGAATCAGCACAACTTAATG+CGG | - | chr4_1:59424642-59424661 | Msa0560180:CDS | 35.0% | |
! | ATGGAAGCAAAACCTTTTGT+TGG | + | chr4_1:59424751-59424770 | None:intergenic | 35.0% |
! | AATAACGGAAATCTAAGTGG+AGG | + | chr4_1:59424861-59424880 | None:intergenic | 35.0% |
ACTGACATTAGTACTTCAGA+TGG | - | chr4_1:59424882-59424901 | Msa0560180:intron | 35.0% | |
ATTAGTACTTCAGATGGTAG+TGG | - | chr4_1:59424888-59424907 | Msa0560180:intron | 35.0% | |
! | ATGGCTTTTATTGTGAAGCA+CGG | - | chr4_1:59424982-59425001 | Msa0560180:intron | 35.0% |
TGACAGTGGTATGTACAATT+TGG | - | chr4_1:59425115-59425134 | Msa0560180:intron | 35.0% | |
ATTTACTCACCTTCATGTGA+TGG | - | chr4_1:59425217-59425236 | Msa0560180:intron | 35.0% | |
TAAAGTTGACCATCACATGA+AGG | + | chr4_1:59425229-59425248 | None:intergenic | 35.0% | |
TTCATGTGATGGTCAACTTT+AGG | - | chr4_1:59425228-59425247 | Msa0560180:intron | 35.0% | |
TCATGTGATGGTCAACTTTA+GGG | - | chr4_1:59425229-59425248 | Msa0560180:intron | 35.0% | |
!! | GTTTTGAATCTTTGGATGCA+AGG | + | chr4_1:59425587-59425606 | None:intergenic | 35.0% |
TGCGAAATACGTTGTATGTT+AGG | - | chr4_1:59425866-59425885 | Msa0560180:intron | 35.0% | |
TAATTAGTAGGTGGCTAAGT+AGG | - | chr4_1:59425913-59425932 | Msa0560180:intron | 35.0% | |
AATTAGTAGGTGGCTAAGTA+GGG | - | chr4_1:59425914-59425933 | Msa0560180:intron | 35.0% | |
GGGAAATTCTTATGAGTTGT+AGG | - | chr4_1:59426031-59426050 | Msa0560180:CDS | 35.0% | |
CTTATGAGTTGTAGGTTTGA+CGG | - | chr4_1:59426039-59426058 | Msa0560180:CDS | 35.0% | |
! | TGACGGAATATGTTTCTGTT+AGG | - | chr4_1:59426056-59426075 | Msa0560180:intron | 35.0% |
!! | TGTTACTGTTGGTTTATTGC+AGG | - | chr4_1:59426226-59426245 | Msa0560180:intron | 35.0% |
CTGAAAGCAAAATATGAACG+TGG | + | chr4_1:59426293-59426312 | None:intergenic | 35.0% | |
TGTTTAATAACTGCAGTGCA+AGG | + | chr4_1:59426575-59426594 | None:intergenic | 35.0% | |
AGCTAAAGATGAATCAGGTA+AGG | + | chr4_1:59426668-59426687 | None:intergenic | 35.0% | |
AAGGAAGAGAGATAAACTAG+TGG | - | chr4_1:59426769-59426788 | Msa0560180:intron | 35.0% | |
TGCACTAATACCAACAATGT+GGG | - | chr4_1:59426805-59426824 | Msa0560180:intron | 35.0% | |
CTATAACAGTTAGCTGTGAA+TGG | + | chr4_1:59426833-59426852 | None:intergenic | 35.0% | |
CATTCACAGCTAACTGTTAT+AGG | - | chr4_1:59426831-59426850 | Msa0560180:intron | 35.0% | |
GCATAAGAGAGATACCAATA+TGG | - | chr4_1:59426993-59427012 | Msa0560180:CDS | 35.0% | |
ATTATTATTACACCCTCAGC+AGG | + | chr4_1:59427235-59427254 | None:intergenic | 35.0% | |
TTTGATGAAGTCCCTACATT+TGG | - | chr4_1:59427329-59427348 | Msa0560180:intron | 35.0% | |
TGGAATAGAAGCTAAGCTAT+TGG | - | chr4_1:59427349-59427368 | Msa0560180:intron | 35.0% | |
AAGCTAAGCTATTGGCATAA+AGG | - | chr4_1:59427357-59427376 | Msa0560180:intron | 35.0% | |
!!! | ATTTTAAGGTGCCAATCCTA+GGG | + | chr4_1:59427397-59427416 | None:intergenic | 35.0% |
!!! | TATTTTAAGGTGCCAATCCT+AGG | + | chr4_1:59427398-59427417 | None:intergenic | 35.0% |
TCCCAAAAAATCTCAGATAG+AGG | - | chr4_1:59427461-59427480 | Msa0560180:intron | 35.0% | |
!!! | GCCTCTATCTGAGATTTTTT+GGG | + | chr4_1:59427465-59427484 | None:intergenic | 35.0% |
GTTCTGATCCACAAATACTT+TGG | - | chr4_1:59427547-59427566 | Msa0560180:intron | 35.0% | |
! | TGTTGAAGCCAAAGTATTTG+TGG | + | chr4_1:59427558-59427577 | None:intergenic | 35.0% |
GTAAAAAGAACCTTGATCCA+GGG | - | chr4_1:59427654-59427673 | Msa0560180:intron | 35.0% | |
ACACAAAGTTTACCTCTTAG+TGG | + | chr4_1:59427694-59427713 | None:intergenic | 35.0% | |
GAGGTAAACTTTGTGTGTTT+AGG | - | chr4_1:59427698-59427717 | Msa0560180:exon | 35.0% | |
AAGACTTCACTCAATCTTGT+GGG | + | chr4_1:59427735-59427754 | None:intergenic | 35.0% | |
! | GAATTCTCGTTGACTGAAAT+TGG | - | chr4_1:59427809-59427828 | Msa0560180:five_prime_UTR | 35.0% |
GAAATGTCCAACCATAACAA+AGG | + | chr4_1:59428050-59428069 | None:intergenic | 35.0% | |
CTTATTTAACAGGGTGACAT+TGG | - | chr4_1:59428069-59428088 | Msa0560180:five_prime_UTR | 35.0% | |
TATTTAACAGGGTGACATTG+GGG | - | chr4_1:59428071-59428090 | Msa0560180:five_prime_UTR | 35.0% | |
!! | AACTAGATGTTTTAGGCAGT+TGG | - | chr4_1:59428508-59428527 | Msa0560180:intron | 35.0% |
GAAGCTAATGACAAACAATC+CGG | - | chr4_1:59428600-59428619 | Msa0560180:intron | 35.0% | |
AACAATCCGGCAAAATATGT+TGG | - | chr4_1:59428613-59428632 | Msa0560180:intron | 35.0% | |
ACAATCCGGCAAAATATGTT+GGG | - | chr4_1:59428614-59428633 | Msa0560180:intron | 35.0% | |
GAAACCAAACGTGTGAAAAT+GGG | - | chr4_1:59428715-59428734 | Msa0560180:intron | 35.0% | |
AAAAAACAGGTTTATGTGCC+AGG | + | chr4_1:59428814-59428833 | None:intergenic | 35.0% | |
TGACTTCTGTAGAAAACTAG+AGG | - | chr4_1:59429116-59429135 | Msa0560180:five_prime_UTR | 35.0% | |
GCACCTTAATCACTTATACA+AGG | + | chr4_1:59429194-59429213 | None:intergenic | 35.0% | |
!! | TAAAGGTGCTCTTTGTTGAA+AGG | - | chr4_1:59429227-59429246 | Msa0560180:five_prime_UTR | 35.0% |
!! | AGCCATTTAGTTTGGGGAAT+AGG | + | chr4_1:59423681-59423700 | None:intergenic | 40.0% |
!! | TCTTCTGAAACCGCTTTCTT+AGG | - | chr4_1:59423781-59423800 | Msa0560180:three_prime_UTR | 40.0% |
TTACACTAACACGTCAACAC+CGG | - | chr4_1:59424208-59424227 | Msa0560180:CDS | 40.0% | |
TGTCAAACACAGACACATGT+CGG | - | chr4_1:59424272-59424291 | Msa0560180:intron | 40.0% | |
GCTCAGATTTGGCATTTGTT+CGG | - | chr4_1:59424518-59424537 | Msa0560180:CDS | 40.0% | |
ATACCACATTGCGACATGAA+GGG | + | chr4_1:59424558-59424577 | None:intergenic | 40.0% | |
CTGAGGCTATTGAAGACATT+CGG | - | chr4_1:59424773-59424792 | Msa0560180:intron | 40.0% | |
GCTATTGAAGACATTCGGAA+TGG | - | chr4_1:59424778-59424797 | Msa0560180:intron | 40.0% | |
TGAAGACATTCGGAATGGAA+AGG | - | chr4_1:59424783-59424802 | Msa0560180:intron | 40.0% | |
TCTAATAATGGCAGCACAGT+TGG | - | chr4_1:59424945-59424964 | Msa0560180:intron | 40.0% | |
ACAATAAAAGCCATAGCCTC+AGG | + | chr4_1:59424976-59424995 | None:intergenic | 40.0% | |
TTTATTGTGAAGCACGGAAC+TGG | - | chr4_1:59424988-59425007 | Msa0560180:intron | 40.0% | |
GAGATTAGAGCTTCCTTTGA+TGG | - | chr4_1:59425047-59425066 | Msa0560180:intron | 40.0% | |
! | TTCCTTTGATGGTCAACAGT+CGG | - | chr4_1:59425058-59425077 | Msa0560180:intron | 40.0% |
!!! | GGTGCGTGCATTTTTTTATC+TGG | - | chr4_1:59425136-59425155 | Msa0560180:intron | 40.0% |
! | ATTTTGTTCCTACGCAACTC+AGG | - | chr4_1:59425476-59425495 | Msa0560180:intron | 40.0% |
TGTGAGGTTGTAGATGATGA+TGG | - | chr4_1:59425741-59425760 | Msa0560180:intron | 40.0% | |
!! | TGTAGATGATGATGGTTCCA+TGG | - | chr4_1:59425749-59425768 | Msa0560180:intron | 40.0% |
AAGCTTAGGTAATCTAGCCA+TGG | + | chr4_1:59425769-59425788 | None:intergenic | 40.0% | |
! | AATTTTCACGCTCTGCAAAC+TGG | + | chr4_1:59425794-59425813 | None:intergenic | 40.0% |
ATGTTAGGACCCAATATGAG+AGG | - | chr4_1:59425881-59425900 | Msa0560180:intron | 40.0% | |
TGTTAGGACCCAATATGAGA+GGG | - | chr4_1:59425882-59425901 | Msa0560180:intron | 40.0% | |
! | TGTTTGTGCTGTGTTACTGT+TGG | - | chr4_1:59426215-59426234 | Msa0560180:intron | 40.0% |
TGGTTTATTGCAGGATCCAT+TGG | - | chr4_1:59426235-59426254 | Msa0560180:intron | 40.0% | |
GGTTTATTGCAGGATCCATT+GGG | - | chr4_1:59426236-59426255 | Msa0560180:intron | 40.0% | |
CATACAATGGTAGAACCCAA+TGG | + | chr4_1:59426254-59426273 | None:intergenic | 40.0% | |
! | GTGCTTGCTCCTAATTTTAG+AGG | - | chr4_1:59426418-59426437 | Msa0560180:intron | 40.0% |
! | CTGCAGTGCAAGGTATTTAA+TGG | + | chr4_1:59426565-59426584 | None:intergenic | 40.0% |
! | AGCGCAGTTAAATTTTTCCG+TGG | - | chr4_1:59426609-59426628 | Msa0560180:intron | 40.0% |
!!! | TCTTTTCTGGTTACCTATCG+AGG | - | chr4_1:59426715-59426734 | Msa0560180:intron | 40.0% |
TAGGTGTTAATCTCCTCGAT+AGG | + | chr4_1:59426731-59426750 | None:intergenic | 40.0% | |
TCGAGGAGATTAACACCTAT+TGG | - | chr4_1:59426732-59426751 | Msa0560180:intron | 40.0% | |
GAGATTAACACCTATTGGTC+TGG | - | chr4_1:59426737-59426756 | Msa0560180:intron | 40.0% | |
CTGCACTAATACCAACAATG+TGG | - | chr4_1:59426804-59426823 | Msa0560180:intron | 40.0% | |
GCACTAATACCAACAATGTG+GGG | - | chr4_1:59426806-59426825 | Msa0560180:intron | 40.0% | |
CACTAATACCAACAATGTGG+GGG | - | chr4_1:59426807-59426826 | Msa0560180:intron | 40.0% | |
!!! | TAGGTCACTTTTAGATGGGA+TGG | - | chr4_1:59426850-59426869 | Msa0560180:intron | 40.0% |
! | TTTTTATATCCTGCCTGCTG+AGG | - | chr4_1:59427219-59427238 | Msa0560180:CDS | 40.0% |
! | TTTTATATCCTGCCTGCTGA+GGG | - | chr4_1:59427220-59427239 | Msa0560180:CDS | 40.0% |
CTCTCTGGACTTCAAGAATT+GGG | + | chr4_1:59427275-59427294 | None:intergenic | 40.0% | |
TCTCTCTGGACTTCAAGAAT+TGG | + | chr4_1:59427276-59427295 | None:intergenic | 40.0% | |
! | TTGTGAGTTGAAACTCTCTC+TGG | + | chr4_1:59427290-59427309 | None:intergenic | 40.0% |
GGAAAATGACATACTTCCCT+AGG | - | chr4_1:59427378-59427397 | Msa0560180:intron | 40.0% | |
ATGACATACTTCCCTAGGAT+TGG | - | chr4_1:59427383-59427402 | Msa0560180:intron | 40.0% | |
!!! | TTTTTTGGGACTTCTAGCCT+TGG | + | chr4_1:59427451-59427470 | None:intergenic | 40.0% |
!!! | GGCCTCTATCTGAGATTTTT+TGG | + | chr4_1:59427466-59427485 | None:intergenic | 40.0% |
ATGATATAGAATGCCTGAGC+AGG | - | chr4_1:59427584-59427603 | Msa0560180:intron | 40.0% | |
GGTAAAAAGAACCTTGATCC+AGG | - | chr4_1:59427653-59427672 | Msa0560180:intron | 40.0% | |
! | CTCTTAGTGGATCCTATTTG+TGG | + | chr4_1:59427681-59427700 | None:intergenic | 40.0% |
CACAAATAGGATCCACTAAG+AGG | - | chr4_1:59427679-59427698 | Msa0560180:intron | 40.0% | |
CAAGACTTCACTCAATCTTG+TGG | + | chr4_1:59427736-59427755 | None:intergenic | 40.0% | |
CACAAGATTGAGTGAAGTCT+TGG | - | chr4_1:59427734-59427753 | Msa0560180:five_prime_UTR | 40.0% | |
AGAAAGATGACTAGATCCCT+GGG | + | chr4_1:59427765-59427784 | None:intergenic | 40.0% | |
TAGAAAGATGACTAGATCCC+TGG | + | chr4_1:59427766-59427785 | None:intergenic | 40.0% | |
TCAACGAGAATTCCATTCCT+GGG | + | chr4_1:59427802-59427821 | None:intergenic | 40.0% | |
AGCCTGCAGGATTTGAAAAT+CGG | - | chr4_1:59427952-59427971 | Msa0560180:intron | 40.0% | |
! | TCGACACTTAGCCTTTGTTA+TGG | - | chr4_1:59428036-59428055 | Msa0560180:five_prime_UTR | 40.0% |
! | CACTTAGCCTTTGTTATGGT+TGG | - | chr4_1:59428040-59428059 | Msa0560180:five_prime_UTR | 40.0% |
ATGGATGTGATGTTCTTGTG+AGG | - | chr4_1:59428094-59428113 | Msa0560180:five_prime_UTR | 40.0% | |
TGGATGTGATGTTCTTGTGA+GGG | - | chr4_1:59428095-59428114 | Msa0560180:five_prime_UTR | 40.0% | |
TGTCTCACAGGAGACATATT+TGG | - | chr4_1:59428129-59428148 | Msa0560180:five_prime_UTR | 40.0% | |
TCTTGCAATGCAACAGATTG+AGG | - | chr4_1:59428185-59428204 | Msa0560180:five_prime_UTR | 40.0% | |
GTATATCTTCGAGGACATGA+AGG | - | chr4_1:59428228-59428247 | Msa0560180:five_prime_UTR | 40.0% | |
TGCTTATAACCTACAGGATG+AGG | - | chr4_1:59428281-59428300 | Msa0560180:five_prime_UTR | 40.0% | |
GCTTATAACCTACAGGATGA+GGG | - | chr4_1:59428282-59428301 | Msa0560180:five_prime_UTR | 40.0% | |
GCAGTTGGATTCACTCATAA+TGG | - | chr4_1:59428523-59428542 | Msa0560180:intron | 40.0% | |
! | TTGAGCCCAACATATTTTGC+CGG | + | chr4_1:59428622-59428641 | None:intergenic | 40.0% |
GCAAAATATGTTGGGCTCAA+AGG | - | chr4_1:59428622-59428641 | Msa0560180:intron | 40.0% | |
TATGTTGGGCTCAAAGGTTA+TGG | - | chr4_1:59428628-59428647 | Msa0560180:intron | 40.0% | |
! | GGTTATGGTTTGTCCATTTC+AGG | - | chr4_1:59428643-59428662 | Msa0560180:intron | 40.0% |
! | ATGGTTTGTCCATTTCAGGT+AGG | - | chr4_1:59428647-59428666 | Msa0560180:intron | 40.0% |
GGAAACCAAACGTGTGAAAA+TGG | - | chr4_1:59428714-59428733 | Msa0560180:intron | 40.0% | |
GTGAAAATGGGTCACATGTA+TGG | - | chr4_1:59428727-59428746 | Msa0560180:intron | 40.0% | |
TATGTCACAACAGAAGAGGA+AGG | - | chr4_1:59428852-59428871 | Msa0560180:intron | 40.0% | |
ATGTCACAACAGAAGAGGAA+GGG | - | chr4_1:59428853-59428872 | Msa0560180:intron | 40.0% | |
! | TGCACGATTTTTCTTCTGTC+TGG | - | chr4_1:59428965-59428984 | Msa0560180:intron | 40.0% |
CGTTCTGTGTTGTGTTGGAT+TGG | + | chr4_1:59423602-59423621 | None:intergenic | 45.0% | |
AGAGAAGGTAAAACTGACCG+TGG | + | chr4_1:59423740-59423759 | None:intergenic | 45.0% | |
! | GGTAAAGCTTTGGCAAGACA+TGG | + | chr4_1:59424092-59424111 | None:intergenic | 45.0% |
! | ACGCCTTTGATCAGAAGTGT+CGG | - | chr4_1:59424304-59424323 | Msa0560180:intron | 45.0% |
! | GTACCGACACTTCTGATCAA+AGG | + | chr4_1:59424310-59424329 | None:intergenic | 45.0% |
CCACGCACATGAATCATAGA+CGG | + | chr4_1:59424499-59424518 | None:intergenic | 45.0% | |
ATTCCCTTCATGTCGCAATG+TGG | - | chr4_1:59424552-59424571 | Msa0560180:CDS | 45.0% | |
CATACCACATTGCGACATGA+AGG | + | chr4_1:59424559-59424578 | None:intergenic | 45.0% | |
GGTTCAGACAGTCCAACAAA+AGG | - | chr4_1:59424736-59424755 | Msa0560180:intron | 45.0% | |
! | AGGTTTTGCTTCCATACCTG+AGG | - | chr4_1:59424756-59424775 | Msa0560180:intron | 45.0% |
GTCTTCAATAGCCTCAGGTA+TGG | + | chr4_1:59424770-59424789 | None:intergenic | 45.0% | |
CGAATGTCTTCAATAGCCTC+AGG | + | chr4_1:59424775-59424794 | None:intergenic | 45.0% | |
GACATTCGGAATGGAAAGGT+CGG | - | chr4_1:59424787-59424806 | Msa0560180:intron | 45.0% | |
AAGCATGAAAGAGGAAGACC+TGG | - | chr4_1:59425023-59425042 | Msa0560180:intron | 45.0% | |
! | AAGGAAGCTCTAATCTCTCC+AGG | + | chr4_1:59425044-59425063 | None:intergenic | 45.0% |
! | TCCTTTGATGGTCAACAGTC+GGG | - | chr4_1:59425059-59425078 | Msa0560180:intron | 45.0% |
CTGTCACAGTGAATGCTGTA+CGG | + | chr4_1:59425101-59425120 | None:intergenic | 45.0% | |
TACAGCATTCACTGTGACAG+TGG | - | chr4_1:59425101-59425120 | Msa0560180:intron | 45.0% | |
GATAAGTTCCTGAGTTGCGT+AGG | + | chr4_1:59425487-59425506 | None:intergenic | 45.0% | |
ACCTGTGGTGGTACCATATT+TGG | + | chr4_1:59425529-59425548 | None:intergenic | 45.0% | |
TTAGCGGGAAAATATGGCCT+GGG | + | chr4_1:59425626-59425645 | None:intergenic | 45.0% | |
TTTAGCGGGAAAATATGGCC+TGG | + | chr4_1:59425627-59425646 | None:intergenic | 45.0% | |
TTCCCGCTAAAATACAGGGA+AGG | - | chr4_1:59425636-59425655 | Msa0560180:intron | 45.0% | |
!!! | CACCTTCCCTGTATTTTAGC+GGG | + | chr4_1:59425641-59425660 | None:intergenic | 45.0% |
!! | CCACCTTCCCTGTATTTTAG+CGG | + | chr4_1:59425642-59425661 | None:intergenic | 45.0% |
GTTGATCTTGCAGTACTTGC+TGG | - | chr4_1:59425696-59425715 | Msa0560180:intron | 45.0% | |
! | TCTTGCAGTACTTGCTGGTT+TGG | - | chr4_1:59425701-59425720 | Msa0560180:intron | 45.0% |
GTTTCTGTTAGGACCAGAGT+AGG | - | chr4_1:59426067-59426086 | Msa0560180:intron | 45.0% | |
TCTGAGTCAGTGAGTTGTGT+CGG | - | chr4_1:59426095-59426114 | Msa0560180:intron | 45.0% | |
GTTGTGTCGGAGCTTAACTT+TGG | - | chr4_1:59426108-59426127 | Msa0560180:intron | 45.0% | |
! | TTAACACCTATTGGTCTGGC+AGG | - | chr4_1:59426741-59426760 | Msa0560180:intron | 45.0% |
TCTATACCTGCCAGACCAAT+AGG | + | chr4_1:59426750-59426769 | None:intergenic | 45.0% | |
! | ATTGGTCTGGCAGGTATAGA+AGG | - | chr4_1:59426750-59426769 | Msa0560180:intron | 45.0% |
GATAAACTAGTGGAACGTGC+TGG | - | chr4_1:59426779-59426798 | Msa0560180:intron | 45.0% | |
GGAGCATATTGCGATGGTAA+AGG | - | chr4_1:59426871-59426890 | Msa0560180:intron | 45.0% | |
AACCTGTTGTTACATTGCCG+TGG | - | chr4_1:59427121-59427140 | Msa0560180:CDS | 45.0% | |
AACTCACGGGAAAAAGACGA+AGG | + | chr4_1:59427487-59427506 | None:intergenic | 45.0% | |
ATTCTGCAGCATTGTCCTGA+TGG | - | chr4_1:59427515-59427534 | Msa0560180:intron | 45.0% | |
TATTTGTGGACCCTGGATCA+AGG | + | chr4_1:59427667-59427686 | None:intergenic | 45.0% | |
TTGATCCAGGGTCCACAAAT+AGG | - | chr4_1:59427666-59427685 | Msa0560180:intron | 45.0% | |
CAATCTTGTGGGCATTAGAG+TGG | + | chr4_1:59427724-59427743 | None:intergenic | 45.0% | |
TCTATTTGGATGTGTAGCCC+AGG | - | chr4_1:59427782-59427801 | Msa0560180:five_prime_UTR | 45.0% | |
GTCAACGAGAATTCCATTCC+TGG | + | chr4_1:59427803-59427822 | None:intergenic | 45.0% | |
! | GGCATTTTCTATAAGCCTGC+AGG | - | chr4_1:59427939-59427958 | Msa0560180:intron | 45.0% |
!!! | TGCCGATTTTCAAATCCTGC+AGG | + | chr4_1:59427957-59427976 | None:intergenic | 45.0% |
GAGACATATTTGGATCTGCC+AGG | - | chr4_1:59428139-59428158 | Msa0560180:five_prime_UTR | 45.0% | |
GTGTGACTGCGGAAATCAAT+TGG | - | chr4_1:59428161-59428180 | Msa0560180:five_prime_UTR | 45.0% | |
! | GGTGTGTTGGTATATCTTCG+AGG | - | chr4_1:59428219-59428238 | Msa0560180:five_prime_UTR | 45.0% |
ATCTTCGAGGACATGAAGGA+AGG | - | chr4_1:59428232-59428251 | Msa0560180:five_prime_UTR | 45.0% | |
TCTTCGAGGACATGAAGGAA+GGG | - | chr4_1:59428233-59428252 | Msa0560180:five_prime_UTR | 45.0% | |
!! | TGAAGGAAGGGGTATTGGAT+TGG | - | chr4_1:59428245-59428264 | Msa0560180:five_prime_UTR | 45.0% |
!! | GAAGGAAGGGGTATTGGATT+GGG | - | chr4_1:59428246-59428265 | Msa0560180:five_prime_UTR | 45.0% |
GGTTATAAGCACGAAGCTTG+TGG | + | chr4_1:59428272-59428291 | None:intergenic | 45.0% | |
GCTTCGTGCTTATAACCTAC+AGG | - | chr4_1:59428275-59428294 | Msa0560180:five_prime_UTR | 45.0% | |
ATAACCTACAGGATGAGGGA+AGG | - | chr4_1:59428286-59428305 | Msa0560180:five_prime_UTR | 45.0% | |
TAACCTACAGGATGAGGGAA+GGG | - | chr4_1:59428287-59428306 | Msa0560180:five_prime_UTR | 45.0% | |
GGATACTGTAGAAGCCAATG+AGG | - | chr4_1:59428308-59428327 | Msa0560180:five_prime_UTR | 45.0% | |
TGTAGAAGCCAATGAGGAGT+TGG | - | chr4_1:59428314-59428333 | Msa0560180:five_prime_UTR | 45.0% | |
GTAGAAGCCAATGAGGAGTT+GGG | - | chr4_1:59428315-59428334 | Msa0560180:five_prime_UTR | 45.0% | |
! | GACTCAAGGGAGTATGGAAT+TGG | - | chr4_1:59428348-59428367 | Msa0560180:five_prime_UTR | 45.0% |
CAATGGGATCCTACCTGAAA+TGG | + | chr4_1:59428659-59428678 | None:intergenic | 45.0% | |
! | GTGACCCATTTTCACACGTT+TGG | + | chr4_1:59428722-59428741 | None:intergenic | 45.0% |
AATGGGTCACATGTATGGCT+TGG | - | chr4_1:59428732-59428751 | Msa0560180:intron | 45.0% | |
!!! | ATATAAAATTTAAAATTGAA+AGG | + | chr4_1:59428001-59428020 | None:intergenic | 5.0% |
TGCTGCGTTCTGTGTTGTGT+TGG | + | chr4_1:59423607-59423626 | None:intergenic | 50.0% | |
CCGTCTATGATTCATGTGCG+TGG | - | chr4_1:59424496-59424515 | Msa0560180:CDS | 50.0% | |
TCATGTGCGTGGCTCAGATT+TGG | - | chr4_1:59424507-59424526 | Msa0560180:CDS | 50.0% | |
! | GTTAAAGCTGCGTTGACCTC+TGG | - | chr4_1:59424583-59424602 | Msa0560180:CDS | 50.0% |
!! | TTTTAGGTCTCCTCCTCCAG+AGG | + | chr4_1:59424602-59424621 | None:intergenic | 50.0% |
CAACTTAATGCGGTAGCGCT+TGG | - | chr4_1:59424652-59424671 | Msa0560180:CDS | 50.0% | |
! | GGAGCAGATACAGCTCTAAC+AGG | - | chr4_1:59424682-59424701 | Msa0560180:CDS | 50.0% |
! | GATACAGCTCTAACAGGCAG+TGG | - | chr4_1:59424688-59424707 | Msa0560180:CDS | 50.0% |
TCGGTACTCTGTCTCTCTGT+GGG | - | chr4_1:59424806-59424825 | Msa0560180:intron | 50.0% | |
! | GGTAGTGGTTGTAGATGACG+AGG | - | chr4_1:59424903-59424922 | Msa0560180:intron | 50.0% |
GACGAGGACAGAGAAAACGA+AGG | - | chr4_1:59424919-59424938 | Msa0560180:intron | 50.0% | |
TCCCGACTGTTGACCATCAA+AGG | + | chr4_1:59425063-59425082 | None:intergenic | 50.0% | |
TGCCTACACAAGTGCAGCTA+GGG | + | chr4_1:59425269-59425288 | None:intergenic | 50.0% | |
ATGCCTACACAAGTGCAGCT+AGG | + | chr4_1:59425270-59425289 | None:intergenic | 50.0% | |
GCCAAATATGGTACCACCAC+AGG | - | chr4_1:59425525-59425544 | Msa0560180:intron | 50.0% | |
CCGCTAAAATACAGGGAAGG+TGG | - | chr4_1:59425639-59425658 | Msa0560180:intron | 50.0% | |
GGTGGTATCTTGAAGAGAGC+TGG | - | chr4_1:59425657-59425676 | Msa0560180:intron | 50.0% | |
!! | ACTTGCTGGTTTGGATCCTG+TGG | - | chr4_1:59425710-59425729 | Msa0560180:intron | 50.0% |
TCTGCAAACTGGCGAAGCTT+AGG | + | chr4_1:59425783-59425802 | None:intergenic | 50.0% | |
GACTCAGAGGAATCCTACTC+TGG | + | chr4_1:59426083-59426102 | None:intergenic | 50.0% | |
!! | GACACAACTCACTGACTCAG+AGG | + | chr4_1:59426096-59426115 | None:intergenic | 50.0% |
CACGGTAGCAGACAACATGA+GGG | + | chr4_1:59426338-59426357 | None:intergenic | 50.0% | |
TCACGGTAGCAGACAACATG+AGG | + | chr4_1:59426339-59426358 | None:intergenic | 50.0% | |
TGGGATGGAGCATATTGCGA+TGG | - | chr4_1:59426865-59426884 | Msa0560180:intron | 50.0% | |
AGCCACGGCAATGTAACAAC+AGG | + | chr4_1:59427126-59427145 | None:intergenic | 50.0% | |
TTATTACACCCTCAGCAGGC+AGG | + | chr4_1:59427231-59427250 | None:intergenic | 50.0% | |
AAATTGTCTGCCAGCTGCCA+AGG | - | chr4_1:59427431-59427450 | Msa0560180:intron | 50.0% | |
CAGAACTCTGCAAAGCCATC+AGG | + | chr4_1:59427533-59427552 | None:intergenic | 50.0% | |
TGGATCCTATTTGTGGACCC+TGG | + | chr4_1:59427674-59427693 | None:intergenic | 50.0% | |
TTGGATGTGTAGCCCAGGAA+TGG | - | chr4_1:59427787-59427806 | Msa0560180:five_prime_UTR | 50.0% | |
TAACAGGGTGACATTGGGGA+TGG | - | chr4_1:59428075-59428094 | Msa0560180:five_prime_UTR | 50.0% | |
! | GTACACTCAGAGTGTCTCAC+AGG | - | chr4_1:59428117-59428136 | Msa0560180:five_prime_UTR | 50.0% |
TTGATTTCCGCAGTCACACC+TGG | + | chr4_1:59428160-59428179 | None:intergenic | 50.0% | |
ATGCAACAGATTGAGGCTGC+TGG | - | chr4_1:59428192-59428211 | Msa0560180:five_prime_UTR | 50.0% | |
CTTCGAGGACATGAAGGAAG+GGG | - | chr4_1:59428234-59428253 | Msa0560180:five_prime_UTR | 50.0% | |
! | GGACATGAAGGAAGGGGTAT+TGG | - | chr4_1:59428240-59428259 | Msa0560180:five_prime_UTR | 50.0% |
TATCCCTTCCCTCATCCTGT+AGG | + | chr4_1:59428293-59428312 | None:intergenic | 50.0% | |
AGGCAATCCCAACTCCTCAT+TGG | + | chr4_1:59428325-59428344 | None:intergenic | 50.0% | |
!! | TGGGATTGCCTGTTGACTCA+AGG | - | chr4_1:59428334-59428353 | Msa0560180:five_prime_UTR | 50.0% |
!! | GGGATTGCCTGTTGACTCAA+GGG | - | chr4_1:59428335-59428354 | Msa0560180:five_prime_UTR | 50.0% |
CCATACTCCCTTGAGTCAAC+AGG | + | chr4_1:59428345-59428364 | None:intergenic | 50.0% | |
!! | CCTGTTGACTCAAGGGAGTA+TGG | - | chr4_1:59428342-59428361 | Msa0560180:five_prime_UTR | 50.0% |
GGAGTATGGAATTGGTGCAC+AGG | - | chr4_1:59428356-59428375 | Msa0560180:five_prime_UTR | 50.0% | |
GATGATTCCAGTACTGCTCC+TGG | - | chr4_1:59428793-59428812 | Msa0560180:intron | 50.0% | |
TTATGTGCCAGGAGCAGTAC+TGG | + | chr4_1:59428803-59428822 | None:intergenic | 50.0% | |
ATAGAATAGGTGAGGGGCTG+AGG | - | chr4_1:59429040-59429059 | Msa0560180:intron | 50.0% | |
TAGAATAGGTGAGGGGCTGA+GGG | - | chr4_1:59429041-59429060 | Msa0560180:intron | 50.0% | |
CACAGACACATGTCGGACGT+TGG | - | chr4_1:59424279-59424298 | Msa0560180:intron | 55.0% | |
! | AAAGCTGCGTTGACCTCTGG+AGG | - | chr4_1:59424586-59424605 | Msa0560180:CDS | 55.0% |
GTCGGTACTCTGTCTCTCTG+TGG | - | chr4_1:59424805-59424824 | Msa0560180:intron | 55.0% | |
AGCACAGTTGGCAACACCTG+AGG | - | chr4_1:59424957-59424976 | Msa0560180:intron | 55.0% | |
GTTGGCAACACCTGAGGCTA+TGG | - | chr4_1:59424963-59424982 | Msa0560180:intron | 55.0% | |
TGGTACCACCACAGGTGTGT+CGG | - | chr4_1:59425533-59425552 | Msa0560180:intron | 55.0% | |
!! | AGGTGTGTCGGCTCAGGATA+GGG | - | chr4_1:59425545-59425564 | Msa0560180:intron | 55.0% |
! | GGATAGGGCAGCCACAGTTT+TGG | - | chr4_1:59425560-59425579 | Msa0560180:intron | 55.0% |
GGATGCAAGGGCCAAAACTG+TGG | + | chr4_1:59425574-59425593 | None:intergenic | 55.0% | |
CCTGGGCGGTTGAAATCACT+TGG | + | chr4_1:59425609-59425628 | None:intergenic | 55.0% | |
CCAAGTGATTTCAACCGCCC+AGG | - | chr4_1:59425606-59425625 | Msa0560180:intron | 55.0% | |
TCCTGTGGCAGTTCTGTGTG+AGG | - | chr4_1:59425725-59425744 | Msa0560180:intron | 55.0% | |
ACCTCACACAGAACTGCCAC+AGG | + | chr4_1:59425729-59425748 | None:intergenic | 55.0% | |
GTGAATGGCCCCCACATTGT+TGG | + | chr4_1:59426818-59426837 | None:intergenic | 55.0% | |
GGACATTCATCTGCCTGCTC+AGG | + | chr4_1:59427600-59427619 | None:intergenic | 55.0% | |
TGAAGTCTTGGCCAGTCCCA+GGG | - | chr4_1:59427746-59427765 | Msa0560180:five_prime_UTR | 55.0% | |
GATGACTAGATCCCTGGGAC+TGG | + | chr4_1:59427760-59427779 | None:intergenic | 55.0% | |
TGCGGTAGCGCTTGGAACAC+TGG | - | chr4_1:59424660-59424679 | Msa0560180:CDS | 60.0% | |
GCGGTAGCGCTTGGAACACT+GGG | - | chr4_1:59424661-59424680 | Msa0560180:CDS | 60.0% | |
CGCCCTAGCTGCACTTGTGT+AGG | - | chr4_1:59425264-59425283 | Msa0560180:intron | 60.0% | |
ATCCTGAGCCGACACACCTG+TGG | + | chr4_1:59425544-59425563 | None:intergenic | 60.0% | |
!! | CAGGTGTGTCGGCTCAGGAT+AGG | - | chr4_1:59425544-59425563 | Msa0560180:intron | 60.0% |
GCGGGAAAATATGGCCTGGG+CGG | + | chr4_1:59425623-59425642 | None:intergenic | 60.0% | |
!! | GGACTTCTAGCCTTGGCAGC+TGG | + | chr4_1:59427444-59427463 | None:intergenic | 60.0% |
GTGAAGTCTTGGCCAGTCCC+AGG | - | chr4_1:59427745-59427764 | Msa0560180:five_prime_UTR | 60.0% | |
GGATCTGCCAGGTGTGACTG+CGG | - | chr4_1:59428150-59428169 | Msa0560180:five_prime_UTR | 60.0% | |
CAGATTGAGGCTGCTGGCAG+AGG | - | chr4_1:59428198-59428217 | Msa0560180:five_prime_UTR | 60.0% | |
TGGACGCGAGAGAGAGGGTG+TGG | + | chr4_1:59423720-59423739 | None:intergenic | 65.0% | |
CACCCTCTCTCTCGCGTCCA+CGG | - | chr4_1:59423720-59423739 | Msa0560180:three_prime_UTR | 65.0% | |
GACCGTGGACGCGAGAGAGA+GGG | + | chr4_1:59423725-59423744 | None:intergenic | 65.0% | |
TGACCGTGGACGCGAGAGAG+AGG | + | chr4_1:59423726-59423745 | None:intergenic | 65.0% | |
! | GCTGCGTTGACCTCTGGAGG+AGG | - | chr4_1:59424589-59424608 | Msa0560180:CDS | 65.0% |
CTGAGCCGACACACCTGTGG+TGG | + | chr4_1:59425541-59425560 | None:intergenic | 65.0% | |
!! | CACCACAGGTGTGTCGGCTC+AGG | - | chr4_1:59425539-59425558 | Msa0560180:intron | 65.0% |
! | GGCTGCTGGCAGAGGTGTGT+TGG | - | chr4_1:59428206-59428225 | Msa0560180:five_prime_UTR | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 59423569 | 59429259 | 59423569 | ID=Msa0560180;Name=Msa0560180 |
chr4_1 | mRNA | 59423569 | 59429259 | 59423569 | ID=Msa0560180-mRNA-1;Parent=Msa0560180;Name=Msa0560180-mRNA-1;_AED=0.05;_eAED=0.05;_QI=752|1|1|1|0.66|0.71|7|437|337 |
chr4_1 | exon | 59423569 | 59424257 | 59423569 | ID=Msa0560180-mRNA-1:exon:18362;Parent=Msa0560180-mRNA-1 |
chr4_1 | exon | 59424451 | 59424747 | 59424451 | ID=Msa0560180-mRNA-1:exon:18361;Parent=Msa0560180-mRNA-1 |
chr4_1 | exon | 59425936 | 59426065 | 59425936 | ID=Msa0560180-mRNA-1:exon:18360;Parent=Msa0560180-mRNA-1 |
chr4_1 | exon | 59426984 | 59427306 | 59426984 | ID=Msa0560180-mRNA-1:exon:18359;Parent=Msa0560180-mRNA-1 |
chr4_1 | exon | 59427692 | 59427927 | 59427692 | ID=Msa0560180-mRNA-1:exon:18358;Parent=Msa0560180-mRNA-1 |
chr4_1 | exon | 59428024 | 59428378 | 59428024 | ID=Msa0560180-mRNA-1:exon:18357;Parent=Msa0560180-mRNA-1 |
chr4_1 | exon | 59429087 | 59429259 | 59429087 | ID=Msa0560180-mRNA-1:exon:18356;Parent=Msa0560180-mRNA-1 |
chr4_1 | five_prime_UTR | 59429087 | 59429259 | 59429087 | ID=Msa0560180-mRNA-1:five_prime_utr;Parent=Msa0560180-mRNA-1 |
chr4_1 | five_prime_UTR | 59428024 | 59428378 | 59428024 | ID=Msa0560180-mRNA-1:five_prime_utr;Parent=Msa0560180-mRNA-1 |
chr4_1 | five_prime_UTR | 59427704 | 59427927 | 59427704 | ID=Msa0560180-mRNA-1:five_prime_utr;Parent=Msa0560180-mRNA-1 |
chr4_1 | CDS | 59427692 | 59427703 | 59427692 | ID=Msa0560180-mRNA-1:cds;Parent=Msa0560180-mRNA-1 |
chr4_1 | CDS | 59426984 | 59427306 | 59426984 | ID=Msa0560180-mRNA-1:cds;Parent=Msa0560180-mRNA-1 |
chr4_1 | CDS | 59425936 | 59426065 | 59425936 | ID=Msa0560180-mRNA-1:cds;Parent=Msa0560180-mRNA-1 |
chr4_1 | CDS | 59424451 | 59424747 | 59424451 | ID=Msa0560180-mRNA-1:cds;Parent=Msa0560180-mRNA-1 |
chr4_1 | CDS | 59424006 | 59424257 | 59424006 | ID=Msa0560180-mRNA-1:cds;Parent=Msa0560180-mRNA-1 |
chr4_1 | three_prime_UTR | 59423569 | 59424005 | 59423569 | ID=Msa0560180-mRNA-1:three_prime_utr;Parent=Msa0560180-mRNA-1 |
Gene Sequence |
Protein sequence |