AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0852730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0852730 MtrunA17_Chr5g0429311 88.657 1005 38 6 1 929 1 1005 0.0 1782
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0852730 AT2G04270.1 51.992 979 365 16 33 928 33 989 0.0 916
Msa0852730 AT2G04270.5 51.826 986 361 17 33 928 33 994 0.0 909
Msa0852730 AT2G04270.2 53.584 879 304 15 133 928 7 864 0.0 835
Msa0852730 AT2G04270.6 53.584 879 304 15 133 928 7 864 0.0 835
Msa0852730 AT2G04270.7 56.809 771 241 12 229 928 62 811 0.0 786
Msa0852730 AT2G04270.4 58.645 723 215 11 269 928 5 706 0.0 764
Msa0852730 AT2G04270.8 58.645 723 215 11 269 928 5 706 0.0 764
Msa0852730 AT2G04270.9 58.645 723 215 11 269 928 5 706 0.0 764
Msa0852730 AT2G04270.3 58.833 617 182 9 269 834 5 600 0.0 650

Find 264 sgRNAs with CRISPR-Local

Find 711 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATCTTCTAACTGATTTA+TGG 0.095145 5_4:+43964635 None:intergenic
CATTCTTGTGTTCATGTTAA+TGG 0.095654 5_4:-43965767 Msa0852730:exon
AACAACTTGGACAACTATTT+TGG 0.161569 5_4:+43961861 None:intergenic
GGTCCTCAAGTGACATTATT+TGG 0.171875 5_4:-43963099 Msa0852730:CDS
CACAAAGCTTGTTCCTTCTA+TGG 0.188021 5_4:-43962361 Msa0852730:CDS
AAATTGTGGTGAGGGATTTA+TGG 0.196048 5_4:-43963021 Msa0852730:CDS
CAAAGTCTGGATTCACTTAA+AGG 0.199648 5_4:-43956389 Msa0852730:intron
AAAACTGGTTGAATTATTAT+TGG 0.202446 5_4:-43962433 Msa0852730:CDS
ACTACACGTTGTGATAAAAT+TGG 0.230210 5_4:-43961653 Msa0852730:CDS
CTACGGAGCACACTAATATT+TGG 0.242930 5_4:-43963641 Msa0852730:CDS
TAAATATAACTATTTCATTA+AGG 0.247183 5_4:-43963131 Msa0852730:CDS
TCAACCCTCAGAATAAATTT+TGG 0.252355 5_4:+43956478 None:intergenic
TTAGTTTCTATTGATGTAAA+TGG 0.253233 5_4:-43959837 Msa0852730:CDS
GGAGGAGCTCTTGTTGATAT+TGG 0.255220 5_4:-43962339 Msa0852730:CDS
TTTACCTTGCAGATTGCTTT+TGG 0.278299 5_4:-43963163 Msa0852730:intron
GAAGACCGAGACACTCATTT+TGG 0.279814 5_4:-43962781 Msa0852730:CDS
CTAAACTAAGAAGTAGATTC+TGG 0.280695 5_4:-43961795 Msa0852730:CDS
GAATTCTAGACCCTCTCTTA+TGG 0.283587 5_4:-43962316 Msa0852730:CDS
GAGAAATGGGAGAAAATAAA+TGG 0.288063 5_4:-43961903 Msa0852730:CDS
ATGTTGGTTACCATTGTAAA+TGG 0.292786 5_4:-43965944 Msa0852730:five_prime_UTR
CAGAATCTACTTCTTAGTTT+AGG 0.293416 5_4:+43961796 None:intergenic
TTCTTTGTCCTTCGACGAAA+TGG 0.304601 5_4:+43962258 None:intergenic
AATATAAATGGTTCCTTGTA+TGG 0.309949 5_4:+43962285 None:intergenic
AATAACGGTTCTCTTTCTTT+AGG 0.312799 5_4:-43961976 Msa0852730:CDS
GGTCATCTCCTGTACATAAC+TGG 0.324732 5_4:-43963717 Msa0852730:CDS
AAATGAGTGTCTCGGTCTTC+AGG 0.327735 5_4:+43962784 None:intergenic
GAAACAAGAAATTGATCTTA+AGG 0.328302 5_4:-43962238 Msa0852730:CDS
AGCTGAAGAAGTATGGAAAT+TGG 0.328792 5_4:+43962991 None:intergenic
TACCACCCAAACCTCATAAA+AGG 0.329789 5_4:-43955455 Msa0852730:three_prime_UTR
ATAAGTATAATGGTGGAAAC+AGG 0.331222 5_4:+43962504 None:intergenic
ATTGTATTACTGCTCTCTTC+AGG 0.338724 5_4:+43962537 None:intergenic
TATGCTTCAGGTTAAGAAAA+TGG 0.342016 5_4:-43961220 Msa0852730:CDS
ATGATCTGTGCAAGATTGTT+TGG 0.343117 5_4:-43963764 Msa0852730:CDS
ACTCGAACAAGAGTAGATTT+TGG 0.345563 5_4:+43955665 None:intergenic
TTTAGGGTTCCACTTGCTAA+TGG 0.345934 5_4:-43959891 Msa0852730:intron
ATGTGTACGTACTTGACTTC+AGG 0.347857 5_4:-43956448 Msa0852730:CDS
TCTCTTTCTTTAGGCATGAA+TGG 0.352053 5_4:-43961967 Msa0852730:CDS
AAATAAGAATAAGAAATAAA+AGG 0.352151 5_4:-43966093 None:intergenic
CTCTTTCTTTAGGCATGAAT+GGG 0.357392 5_4:-43961966 Msa0852730:CDS
CAATCTTGCAGCTGCAAAAC+AGG 0.361632 5_4:-43959760 Msa0852730:intron
TGGTGAGGGATTTATGGATT+AGG 0.362458 5_4:-43963015 Msa0852730:CDS
CAGTTTATATGATATGCTTC+AGG 0.362872 5_4:-43961232 Msa0852730:CDS
GTATGGCATATACAAAATTC+TGG 0.363159 5_4:+43955597 None:intergenic
GAGGAGCTCTTGTTGATATT+GGG 0.366483 5_4:-43962338 Msa0852730:CDS
TTGTCTTTCAGAAGTTCTTA+AGG 0.368877 5_4:-43962091 Msa0852730:CDS
TCTTTGTCCTTCGACGAAAT+GGG 0.369305 5_4:+43962259 None:intergenic
ATGCATGAGCTGAAGAAGTA+TGG 0.375087 5_4:+43962984 None:intergenic
ACATTGCAGCCAGAGGGTTT+TGG 0.375658 5_4:-43961575 Msa0852730:CDS
AGTTAGAAATCGGCTGTTAT+AGG 0.383195 5_4:-43955492 Msa0852730:three_prime_UTR
AAAAGATACAAAGAGAGAAA+TGG 0.386591 5_4:-43961917 Msa0852730:CDS
TTAATCAGCAAATAAAAGAT+TGG 0.395749 5_4:-43957503 Msa0852730:intron
ACTGGGGACCCTGCTGTGTT+AGG 0.398477 5_4:-43963699 Msa0852730:CDS
CTCTTTGGTGAAAGTGTGTA+AGG 0.404875 5_4:+43965682 None:intergenic
AGAAACAAAACAAACCTCTT+TGG 0.405450 5_4:+43965667 None:intergenic
CAAGACCCTCTTTAACAACT+TGG 0.406513 5_4:+43961848 None:intergenic
TTCTCAGAAAGAACGTTAAT+AGG 0.407954 5_4:+43962699 None:intergenic
AAACAAGAAATTGATCTTAA+GGG 0.408280 5_4:-43962237 Msa0852730:CDS
TGCTCTTGCTGCTGATGAAA+GGG 0.414400 5_4:-43961444 Msa0852730:CDS
TCTCGTGCTACTGACATTCC+TGG 0.415274 5_4:-43962198 Msa0852730:CDS
AGTAACCAGGGTTCCTCAAC+AGG 0.417248 5_4:+43962669 None:intergenic
GTTACTCCATTCACTGCATT+CGG 0.417903 5_4:-43962652 Msa0852730:CDS
CTGCTCTTGCTGCTGATGAA+AGG 0.419152 5_4:-43961445 Msa0852730:CDS
GGAGCTGATGTTCATATAGA+AGG 0.419319 5_4:-43962006 Msa0852730:CDS
ATGGAGTTTATTGCTGAAGT+TGG 0.419570 5_4:-43965748 Msa0852730:CDS
AAAGATACAAAGAGAGAAAT+GGG 0.421993 5_4:-43961916 Msa0852730:CDS
ACAAGAGCTCCTCCCATAGA+AGG 0.425578 5_4:+43962348 None:intergenic
ACCCTGCTGTGTTAGGCTGC+TGG 0.426473 5_4:-43963692 Msa0852730:CDS
TCTCTCTTCTAAGCCATGTA+TGG 0.426825 5_4:+43955580 None:intergenic
AATTCTTTGCATGGTACATA+TGG 0.427132 5_4:+43962473 None:intergenic
TTCATTGATATGACAGATGA+AGG 0.429865 5_4:-43958008 Msa0852730:intron
GGATGAGTTTATAAGTATAA+TGG 0.432382 5_4:+43962494 None:intergenic
TGAGCAGTTCTCTCAAAGTC+TGG 0.433316 5_4:-43956402 Msa0852730:CDS
GACATTAGTACAGCCATGTT+GGG 0.434558 5_4:+43963666 None:intergenic
TGAGAGTCAGAGTTAGAAAT+CGG 0.435330 5_4:-43955502 Msa0852730:three_prime_UTR
TCGACCAAGTGTGACATTCA+TGG 0.439537 5_4:-43956930 Msa0852730:CDS
AACTTTCAACCTTGTGCACT+CGG 0.443646 5_4:+43961607 None:intergenic
GTGTGGGAAATGAAGAGGTT+TGG 0.449507 5_4:+43965850 None:intergenic
CTCTAGCAGTCATTAGGTAT+TGG 0.458126 5_4:-43955317 Msa0852730:three_prime_UTR
AGTTCCTCTGGTGAACCCTC+TGG 0.461272 5_4:+43955760 None:intergenic
TTGAAATGGCAACTTGATGC+TGG 0.461313 5_4:+43955696 None:intergenic
TTTGATCTCAAAAGTTCCTC+TGG 0.462399 5_4:+43955748 None:intergenic
AAGATACGTTTCCTCAGTGC+AGG 0.462824 5_4:+43962955 None:intergenic
ATACCTCATGAAATGTCCTT+GGG 0.463476 5_4:+43961187 None:intergenic
CAAGTTGTTAAAGAGGGTCT+TGG 0.466067 5_4:-43961847 Msa0852730:CDS
TGGAAGGTTTGCTTTCGACT+TGG 0.466461 5_4:-43961496 Msa0852730:CDS
TTCCAGCAGCCTAACACAGC+AGG 0.466949 5_4:+43963690 None:intergenic
GGTTTGGATAAAATATAGAT+AGG 0.467660 5_4:+43965866 None:intergenic
GGTGTACTCTAGCAGTCATT+AGG 0.468456 5_4:-43955323 Msa0852730:three_prime_UTR
CCAGGCAACAATGAACCATA+AGG 0.470091 5_4:-43956527 Msa0852730:intron
AGAAGATGATGTGGAGTGTT+GGG 0.470668 5_4:-43965998 Msa0852730:five_prime_UTR
AGAGAGAAATAGTAGAGTCC+AGG 0.470840 5_4:-43955564 Msa0852730:three_prime_UTR
GAGTTGCGACTACGAGATAT+TGG 0.473529 5_4:-43958050 Msa0852730:CDS
TTATGAGGTTTGGGTGGTAT+CGG 0.474504 5_4:+43955459 None:intergenic
CTTTGCACATTAGTCTTCAC+TGG 0.475053 5_4:+43962408 None:intergenic
CTTTGTCCTTCGACGAAATG+GGG 0.475059 5_4:+43962260 None:intergenic
CACAGATCTGTCTCTCTCAA+TGG 0.475279 5_4:+43957459 None:intergenic
TGAGGAACTGCAGAAAGACT+TGG 0.476729 5_4:-43961516 Msa0852730:CDS
AGTGACATTATTTGGAAGCC+TGG 0.477435 5_4:-43963091 Msa0852730:CDS
TCAAAAGCTAGGTGAAATAG+AGG 0.478898 5_4:-43955635 Msa0852730:exon
CATGCAAAGAATTGCAGTAC+TGG 0.478961 5_4:-43962463 Msa0852730:CDS
CATACCTCATGAAATGTCCT+TGG 0.479550 5_4:+43961186 None:intergenic
GATTATTTCAATGAAAATGT+TGG 0.484380 5_4:-43961359 Msa0852730:intron
TAAACTAAGAAGTAGATTCT+GGG 0.484872 5_4:-43961794 Msa0852730:intron
TGTTGAAGGGTGTTTAATGT+TGG 0.485163 5_4:-43965960 Msa0852730:five_prime_UTR
TGAAGTAGAAGCTGACTTTG+AGG 0.487607 5_4:-43962040 Msa0852730:CDS
ACTGTTGCCATGCCACAGGC+AGG 0.487944 5_4:-43956892 Msa0852730:CDS
ACCTTAGGCTGCCAATCCAT+TGG 0.488326 5_4:-43955157 Msa0852730:three_prime_UTR
ACAAAGCTTGTTCCTTCTAT+GGG 0.490121 5_4:-43962360 Msa0852730:CDS
AGAATCTACAGCAATGATCA+TGG 0.496063 5_4:-43955270 Msa0852730:three_prime_UTR
CATTAACATGAACACAAGAA+TGG 0.496415 5_4:+43965768 None:intergenic
GTAGAAGCTGATTTAGAAGA+TGG 0.496626 5_4:-43963738 Msa0852730:CDS
TGCTCTTCCAACTTCCACCC+TGG 0.497495 5_4:+43955546 None:intergenic
CTTACACACTTTCACCAAAG+AGG 0.498257 5_4:-43965681 Msa0852730:intron
TGTGTACGTACTTGACTTCA+GGG 0.501228 5_4:-43956447 Msa0852730:CDS
ATCTAGAATAGCTTTCTCCT+TGG 0.503171 5_4:+43959785 None:intergenic
AGTTGTCCAAGTTGTTAAAG+AGG 0.504870 5_4:-43961854 Msa0852730:CDS
TAATGACATTGTGAAAGAAC+AGG 0.505270 5_4:-43962589 Msa0852730:CDS
GTAGAGTCCAGGGTGGAAGT+TGG 0.506186 5_4:-43955553 Msa0852730:three_prime_UTR
AGATAATGAAATTGTGGTGA+GGG 0.506581 5_4:-43963029 Msa0852730:CDS
GCATCAAGTTGCCATTTCAA+AGG 0.507580 5_4:-43955693 Msa0852730:CDS
ACCTGCAGCAACAGTTCTTA+CGG 0.507724 5_4:+43961547 None:intergenic
AGCAAAGACATTGCAGCCAG+AGG 0.508356 5_4:-43961582 Msa0852730:CDS
AAATGGTCTTACTAGTAAGC+TGG 0.510322 5_4:-43965927 Msa0852730:five_prime_UTR
GAATAAGAAATAAAAGGTGG+TGG 0.510435 5_4:-43966087 None:intergenic
CATCAAGTTGCCATTTCAAA+GGG 0.510524 5_4:-43955692 Msa0852730:CDS
GAGAAGATGATGTGGAGTGT+TGG 0.510697 5_4:-43965999 Msa0852730:five_prime_UTR
GAGAGAAATAGTAGAGTCCA+GGG 0.514045 5_4:-43955563 Msa0852730:three_prime_UTR
AGATAACCGAATGCAGTGAA+TGG 0.514561 5_4:+43962646 None:intergenic
GCCAATGGATTGGCAGCCTA+AGG 0.515562 5_4:+43955156 None:intergenic
AGCTGGAAACCGTTATATTG+TGG 0.515913 5_4:-43965910 Msa0852730:five_prime_UTR
TATTTGGAAAGCTGAATCTC+AGG 0.516500 5_4:-43963625 Msa0852730:intron
ACGGTGAGGCCAAAACCCTC+TGG 0.517590 5_4:+43961566 None:intergenic
TGTGAAAGAACAGGTGAAGT+TGG 0.518865 5_4:-43962580 Msa0852730:CDS
GTTCTTAAGGAAAATGTGAA+TGG 0.519949 5_4:-43962078 Msa0852730:CDS
TCATCCTCAGAATGTATGTC+GGG 0.521637 5_4:+43962168 None:intergenic
AATAAGAAATAAAAGGTGGT+GGG 0.523924 5_4:-43966086 None:intergenic
GCTGGAAACCGTTATATTGT+GGG 0.525057 5_4:-43965909 Msa0852730:five_prime_UTR
TTAAGAGAGAGAAGATGATG+TGG 0.528492 5_4:-43966007 Msa0852730:five_prime_UTR
CAAATATTAGTGTGCTCCGT+AGG 0.529663 5_4:+43963642 None:intergenic
GCAAAGACATTGCAGCCAGA+GGG 0.529914 5_4:-43961581 Msa0852730:CDS
CCAATTCTTCAGGTTTCCAG+AGG 0.531140 5_4:-43955776 Msa0852730:intron
ATACTTCTTCAGCTCATGCA+TGG 0.532044 5_4:-43962982 Msa0852730:CDS
CAGGGTCCCCAGTTATGTAC+AGG 0.532715 5_4:+43963709 None:intergenic
CTGGCCAAAATTTATTCTGA+GGG 0.534169 5_4:-43956482 Msa0852730:CDS
AAAGAGTGTGGGAAATGAAG+AGG 0.536652 5_4:+43965845 None:intergenic
ATTGCCCTGTGCAAAATAGC+AGG 0.537510 5_4:+43961407 None:intergenic
ACCGTAAGAACTGTTGCTGC+AGG 0.540954 5_4:-43961548 Msa0852730:CDS
ATTGTCAAGACATGGACTCA+TGG 0.542121 5_4:-43957422 Msa0852730:CDS
CCTGGCCAAAATTTATTCTG+AGG 0.542821 5_4:-43956483 Msa0852730:CDS
AAATGTCAAAGCCAATGGAT+TGG 0.542944 5_4:+43955146 None:intergenic
CTAATGTGTTACAGATTGCA+AGG 0.543201 5_4:-43958073 Msa0852730:intron
ATCTTCCAAAATGAGTGTCT+CGG 0.543265 5_4:+43962776 None:intergenic
TCAAGTACGTACACATATGA+TGG 0.545000 5_4:+43956455 None:intergenic
GAAAGAGAAAATGCTGGTCC+AGG 0.545966 5_4:+43963073 None:intergenic
ATTGATGTAAATGGAGGACA+TGG 0.546388 5_4:-43959828 Msa0852730:CDS
AGACATTAGTACAGCCATGT+TGG 0.546488 5_4:+43963665 None:intergenic
CAGTACTGCAATTCTTTGCA+TGG 0.551310 5_4:+43962464 None:intergenic
AACCTCAAAAGCCTAAGTCC+TGG 0.552180 5_4:-43956501 Msa0852730:CDS
AAGTGTGTAAGGATTAGAGA+AGG 0.552520 5_4:+43965693 None:intergenic
TCATGGAAATAACACGAAAG+AGG 0.553966 5_4:-43957405 Msa0852730:CDS
CAATTCTTCAGGTTTCCAGA+GGG 0.554027 5_4:-43955775 Msa0852730:intron
GTCATCTCCTGTACATAACT+GGG 0.554362 5_4:-43963716 Msa0852730:CDS
GCATGAGGAGAACCAACCTT+AGG 0.554626 5_4:-43955172 Msa0852730:three_prime_UTR
CCGACTTTGTCATCAGTGCA+TGG 0.554713 5_4:+43955725 None:intergenic
TGAGTTTATAAGTATAATGG+TGG 0.556071 5_4:+43962497 None:intergenic
AGGGTTCCACTTGCTAATGG+AGG 0.556138 5_4:-43959888 Msa0852730:CDS
GTCTCTGAATTGTCAAGACA+TGG 0.559237 5_4:-43957430 Msa0852730:CDS
TCTAGAAGATAATGAAATTG+TGG 0.560150 5_4:-43963035 Msa0852730:CDS
TTCAACTTTAACCTCTCCAA+TGG 0.562218 5_4:+43966041 None:intergenic
GAGTGATAAAATCAAAAGCT+AGG 0.562347 5_4:-43955646 Msa0852730:CDS
ATGGATTGGCAGCCTAAGGT+TGG 0.562564 5_4:+43955160 None:intergenic
ACCAGCCTGTTGAGGAACCC+TGG 0.562662 5_4:-43962674 Msa0852730:CDS
CAGGCAACAATGAACCATAA+GGG 0.562925 5_4:-43956526 Msa0852730:CDS
CTCCGTGTAGCGGTACATGA+TGG 0.564338 5_4:+43964686 None:intergenic
AGTGTGTAAGGATTAGAGAA+GGG 0.565982 5_4:+43965694 None:intergenic
CTTCAACCCTGCCTGTGGCA+TGG 0.569733 5_4:+43956885 None:intergenic
GTTGTCCAAGTTGTTAAAGA+GGG 0.570234 5_4:-43961853 Msa0852730:CDS
ACGAGGCACCCACAATATAA+CGG 0.571356 5_4:+43965901 None:intergenic
TCATTCACAACAACGCAGAA+AGG 0.573831 5_4:-43964610 Msa0852730:intron
GACTTTGAGGATGATGTTGA+GGG 0.574369 5_4:-43962027 Msa0852730:CDS
TGAGAATTACCAGCCTGTTG+AGG 0.576972 5_4:-43962682 Msa0852730:CDS
ATCATCCTCAGAATGTATGT+CGG 0.578414 5_4:+43962167 None:intergenic
GCAAAGCGATAGTGTATATG+TGG 0.578495 5_4:-43962391 Msa0852730:CDS
ATGCAGTGAATGGAGTAACC+AGG 0.579526 5_4:+43962656 None:intergenic
ACCAGGGTTCCTCAACAGGC+TGG 0.581237 5_4:+43962673 None:intergenic
CTAACCATGAATGTCACACT+TGG 0.582077 5_4:+43956926 None:intergenic
AGATACGTTTCCTCAGTGCA+GGG 0.586553 5_4:+43962956 None:intergenic
TTTCTGGTGCCGAGTGCACA+AGG 0.588609 5_4:-43961616 Msa0852730:CDS
GATAAAATATAGATAGGAGG+TGG 0.589850 5_4:+43965872 None:intergenic
CATGGAAATAACACGAAAGA+GGG 0.590249 5_4:-43957404 Msa0852730:intron
GTTTCTATTGATGTAAATGG+AGG 0.590497 5_4:-43959834 Msa0852730:CDS
TGGCTTAATGTCCATAAGAG+AGG 0.591180 5_4:+43962305 None:intergenic
TGACTTTGAGGATGATGTTG+AGG 0.591211 5_4:-43962028 Msa0852730:CDS
GGCTGTACTAATGTCTCCTA+CGG 0.592180 5_4:-43963658 Msa0852730:CDS
GAGAGACAGATCTGTGGTGA+AGG 0.592886 5_4:-43957452 Msa0852730:CDS
GCTGCTGATGAAAGGGTGGA+AGG 0.597663 5_4:-43961437 Msa0852730:CDS
AATACCCGACATACATTCTG+AGG 0.599268 5_4:-43962172 Msa0852730:CDS
TAAAGAGGGTCTTGGTACGA+AGG 0.599760 5_4:-43961839 Msa0852730:CDS
GGCTTAATGTCCATAAGAGA+GGG 0.602735 5_4:+43962306 None:intergenic
TTTGTCCTTCGACGAAATGG+GGG 0.602939 5_4:+43962261 None:intergenic
AAGATAATGAAATTGTGGTG+AGG 0.606654 5_4:-43963030 Msa0852730:CDS
AAATGGTGGTCGACTCCCCA+AGG 0.607016 5_4:-43961203 Msa0852730:CDS
GCTTGATCATGATACTTCCA+AGG 0.610483 5_4:-43959802 Msa0852730:CDS
ATAAGAAATAAAAGGTGGTG+GGG 0.610615 5_4:-43966085 None:intergenic
TTGGATAAAATATAGATAGG+AGG 0.611773 5_4:+43965869 None:intergenic
AGAGAACCTCCATTAGCAAG+TGG 0.614293 5_4:+43959882 None:intergenic
TAAGAATAAGAAATAAAAGG+TGG 0.614302 5_4:-43966090 None:intergenic
GGTACTGAAAGAGAAAATGC+TGG 0.615616 5_4:+43963067 None:intergenic
TCTACAGCAATGATCATGGA+AGG 0.615831 5_4:-43955266 Msa0852730:three_prime_UTR
AAATGGATCCAAGTTCGTAA+CGG 0.620257 5_4:-43961886 Msa0852730:CDS
TTCCATCATGTACCGCTACA+CGG 0.620749 5_4:-43964688 Msa0852730:CDS
CTTCCAAATAATGTCACTTG+AGG 0.621287 5_4:+43963096 None:intergenic
CAGCGCAAAGAGAAAGAGTG+TGG 0.622174 5_4:+43965833 None:intergenic
AAGCTTGTTCCTTCTATGGG+AGG 0.622349 5_4:-43962357 Msa0852730:CDS
TGTGACTGTTGCCATGCCAC+AGG 0.622968 5_4:-43956896 Msa0852730:CDS
AAAGAGGGTCTTGGTACGAA+GGG 0.622969 5_4:-43961838 Msa0852730:CDS
TAGAAATCGGCTGTTATAGG+CGG 0.624657 5_4:-43955489 Msa0852730:three_prime_UTR
TAAGTATAATGGTGGAAACA+GGG 0.624957 5_4:+43962505 None:intergenic
ACTGCATTCGGTTATCTCTG+AGG 0.625385 5_4:-43962640 Msa0852730:CDS
TATGGACATTAAGCCATACA+AGG 0.629860 5_4:-43962298 Msa0852730:CDS
GTTTCCAGAGGGTTCACCAG+AGG 0.631163 5_4:-43955764 Msa0852730:CDS
TTAGGAAAAGCAGTCAGAGT+GGG 0.631186 5_4:+43961814 None:intergenic
TTTAGGAAAAGCAGTCAGAG+TGG 0.631972 5_4:+43961813 None:intergenic
TAAAGCTTCAACCCTGCCTG+TGG 0.636968 5_4:+43956880 None:intergenic
TGCAGTGAATGGAGTAACCA+GGG 0.637641 5_4:+43962657 None:intergenic
GTGGCATGGCAACAGTCACA+TGG 0.638742 5_4:+43956899 None:intergenic
GCAAAGAATTGCAGTACTGG+AGG 0.639467 5_4:-43962460 Msa0852730:CDS
AATCTATATTCTCCGTGTAG+CGG 0.641472 5_4:+43964676 None:intergenic
TTGTCCTTCGACGAAATGGG+GGG 0.641843 5_4:+43962262 None:intergenic
TGTATGTCGGGTATTCCACC+AGG 0.649297 5_4:+43962180 None:intergenic
CGTGCTACTGACATTCCTGG+TGG 0.654605 5_4:-43962195 Msa0852730:CDS
GATACGTTTCCTCAGTGCAG+GGG 0.654945 5_4:+43962957 None:intergenic
TTATCTTCTAGAACTGTCAG+AGG 0.656090 5_4:+43963046 None:intergenic
GGAAAATGTGAATGGTAGTG+TGG 0.656394 5_4:-43962070 Msa0852730:CDS
TAATGTGTTACAGATTGCAA+GGG 0.657971 5_4:-43958072 Msa0852730:intron
TTGCGACTACGAGATATTGG+TGG 0.659402 5_4:-43958047 Msa0852730:CDS
CTCCCCAAGGACATTTCATG+AGG 0.659988 5_4:-43961190 Msa0852730:intron
CAAAGCGATAGTGTATATGT+GGG 0.662133 5_4:-43962390 Msa0852730:CDS
ACTAGTAAGACCATTTACAA+TGG 0.664575 5_4:+43965934 None:intergenic
CTGTTGCCATGCCACAGGCA+GGG 0.666356 5_4:-43956891 Msa0852730:CDS
TCCAGCAGCCTAACACAGCA+GGG 0.666592 5_4:+43963691 None:intergenic
CTTGCACAGATCATCAACAC+TGG 0.667226 5_4:+43963773 None:intergenic
AAAGCGATAGTGTATATGTG+GGG 0.667444 5_4:-43962389 Msa0852730:CDS
AGCGCAAAGAGAAAGAGTGT+GGG 0.668420 5_4:+43965834 None:intergenic
CAGCAACAGTTCTTACGGTG+AGG 0.670813 5_4:+43961552 None:intergenic
AAGCGATAGTGTATATGTGG+GGG 0.671316 5_4:-43962388 Msa0852730:CDS
AGGCTGCTGGAAACCCAACA+TGG 0.673166 5_4:-43963679 Msa0852730:CDS
TCTAATCATCGAGCAAACTG+AGG 0.674762 5_4:-43959862 Msa0852730:CDS
TACCTCATGAAATGTCCTTG+GGG 0.675349 5_4:+43961188 None:intergenic
CCATGCACTGATGACAAAGT+CGG 0.677515 5_4:-43955725 Msa0852730:CDS
TCTTGCTGCTGATGAAAGGG+TGG 0.678318 5_4:-43961441 Msa0852730:CDS
GCACAGATCATCAACACTGG+TGG 0.678988 5_4:+43963776 None:intergenic
AGAAATAGTAGAGTCCAGGG+TGG 0.679296 5_4:-43955560 Msa0852730:three_prime_UTR
CATTGAGAGAGACAGATCTG+TGG 0.691178 5_4:-43957458 Msa0852730:CDS
AATGGGTCAAACTCTCTCAG+TGG 0.692733 5_4:-43961387 Msa0852730:CDS
GAACTGCAGAAAGACTTGGA+AGG 0.693387 5_4:-43961512 Msa0852730:CDS
GCTTCAGGTTAAGAAAATGG+TGG 0.695354 5_4:-43961217 Msa0852730:CDS
GTGGTTTGACAGATGAACGA+AGG 0.695798 5_4:-43962833 Msa0852730:CDS
TGCATGGAACCCCTGCACTG+AGG 0.714496 5_4:-43962966 Msa0852730:CDS
ATAGGAGGTGGTGACACACG+AGG 0.718105 5_4:+43965884 None:intergenic
AATGGAATTTGACAGTGACG+AGG 0.725421 5_4:+43965786 None:intergenic
AGATATTGGTGGCATCATCG+TGG 0.728379 5_4:-43958036 Msa0852730:CDS
TCATCTCCTGTACATAACTG+GGG 0.744603 5_4:-43963715 Msa0852730:CDS
TTGATGTAAATGGAGGACAT+GGG 0.780837 5_4:-43959827 Msa0852730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATAACTATTTCATTA+AGG - chr5_4:43957993-43958012 Msa0852730:intron 10.0%
!!! TATTTATTTTTATCTTTATG+TGG - chr5_4:43961203-43961222 Msa0852730:CDS 10.0%
!!! TTTTTTGGTATTATTAATTT+TGG + chr5_4:43965749-43965768 None:intergenic 10.0%
!!! CAAATAATAAAAAGTACAAA+AGG + chr5_4:43955553-43955572 None:intergenic 15.0%
!!! TTTGTACTTTTTATTATTTG+TGG - chr5_4:43955553-43955572 Msa0852730:three_prime_UTR 15.0%
!!! CAAATATTTTTTATTAACGT+TGG - chr5_4:43955888-43955907 Msa0852730:intron 15.0%
!!! ACTTCATTTTTTTAGTTATA+CGG - chr5_4:43956584-43956603 Msa0852730:intron 15.0%
!! ATAATCTAAACTTTAATGAA+AGG + chr5_4:43957866-43957885 None:intergenic 15.0%
!!! TATTTTTTCTTTAGAATTTG+TGG - chr5_4:43960259-43960278 Msa0852730:intron 15.0%
!!! TTTTAAAACTGTTAAGTATA+GGG + chr5_4:43960579-43960598 None:intergenic 15.0%
!!! TTTTTAAAACTGTTAAGTAT+AGG + chr5_4:43960580-43960599 None:intergenic 15.0%
!!! TACTTAACAGTTTTAAAAAT+CGG - chr5_4:43960581-43960600 Msa0852730:intron 15.0%
!! TGACAAATAAATGATTAAAA+AGG - chr5_4:43960670-43960689 Msa0852730:intron 15.0%
!! ACTGTAAAAAAATAAAAAAC+CGG - chr5_4:43960702-43960721 Msa0852730:intron 15.0%
!! AGTTGAACTATATAATAAAA+AGG - chr5_4:43960968-43960987 Msa0852730:intron 15.0%
!!! AATAGGATTTAAGTTATATT+CGG + chr5_4:43961710-43961729 None:intergenic 15.0%
!! TTGATAAGAATTTATAAAGA+GGG + chr5_4:43962106-43962125 None:intergenic 15.0%
!! TAGAATAATACTAAAGTTAA+AGG - chr5_4:43962321-43962340 Msa0852730:CDS 15.0%
!! AGAATAATACTAAAGTTAAA+GGG - chr5_4:43962322-43962341 Msa0852730:CDS 15.0%
!! AAAAGAAGAAAAATTTATTG+TGG + chr5_4:43964458-43964477 None:intergenic 15.0%
!!! TTTGTTTTTATTTATATTCC+AGG - chr5_4:43964579-43964598 Msa0852730:intron 15.0%
!! TTATACAAAATTAAAGTAAC+TGG + chr5_4:43964832-43964851 None:intergenic 15.0%
!!! ATTTTTTTTTTTACTGATGT+TGG - chr5_4:43965171-43965190 Msa0852730:intron 15.0%
!!! TGCAAATATCAATTTTATAT+AGG + chr5_4:43965228-43965247 None:intergenic 15.0%
!!! ATCATTTAATTTTTTCTCTA+AGG - chr5_4:43965279-43965298 Msa0852730:intron 15.0%
!! TTAATAATACCAAAAAACAA+TGG - chr5_4:43965752-43965771 Msa0852730:CDS 15.0%
!!! TGAAGTATACATTTTTTTCA+TGG + chr5_4:43955517-43955536 None:intergenic 20.0%
!!! CTTTTTTGTTTTGATGAAAA+GGG - chr5_4:43955651-43955670 Msa0852730:CDS 20.0%
!!! ATTTTGTTCTTATTGTTGTT+TGG - chr5_4:43955682-43955701 Msa0852730:CDS 20.0%
!! TTGAATTGATATATGAAACA+AGG - chr5_4:43956105-43956124 Msa0852730:intron 20.0%
!! CACTTATGTATCAAAATATT+GGG - chr5_4:43956402-43956421 Msa0852730:CDS 20.0%
!!! AAAAGTTTTTTGTTCTTGTA+TGG - chr5_4:43956809-43956828 Msa0852730:intron 20.0%
!!! TTAATTTTCTTTAACTACAG+AGG + chr5_4:43956860-43956879 None:intergenic 20.0%
!! ATTAAATTATTAATCCGTCA+GGG + chr5_4:43956890-43956909 None:intergenic 20.0%
!! TATTAAATTATTAATCCGTC+AGG + chr5_4:43956891-43956910 None:intergenic 20.0%
!! AAAAAGTTTAAAGATGTAAG+TGG + chr5_4:43956953-43956972 None:intergenic 20.0%
!!! ATTTTTTAACTAAATGAAGC+AGG - chr5_4:43957016-43957035 Msa0852730:intron 20.0%
!!! TTTTTTTTTTTATCTCCAGA+AGG - chr5_4:43957753-43957772 Msa0852730:intron 20.0%
!! ATTTCATTAAGGAAAAATCA+AGG - chr5_4:43958004-43958023 Msa0852730:intron 20.0%
!! AAAACTGGTTGAATTATTAT+TGG - chr5_4:43958691-43958710 Msa0852730:intron 20.0%
!! AAACAAGAAATTGATCTTAA+GGG - chr5_4:43958887-43958906 Msa0852730:intron 20.0%
!! ATAGAAGGAAAAATGAATAA+CGG - chr5_4:43959133-43959152 Msa0852730:intron 20.0%
!! TTTCTCATAAATCATCTATA+TGG - chr5_4:43959409-43959428 Msa0852730:intron 20.0%
!!! CATTTTCATTGAAATAATCT+TGG + chr5_4:43959764-43959783 None:intergenic 20.0%
!! GATTATTTCAATGAAAATGT+TGG - chr5_4:43959765-43959784 Msa0852730:CDS 20.0%
!!! CTAAGTTGAAATATTAAAAC+TGG - chr5_4:43959981-43960000 Msa0852730:intron 20.0%
!! TTAATCATTTATTTGTCATC+AGG + chr5_4:43960668-43960687 None:intergenic 20.0%
!! TTAGTTTCTATTGATGTAAA+TGG - chr5_4:43961287-43961306 Msa0852730:intron 20.0%
!! AATATATTTGTTCATCACTT+AGG - chr5_4:43961413-43961432 Msa0852730:CDS 20.0%
!!! TAGGCTTTAATAAATAAACT+TGG - chr5_4:43961432-43961451 Msa0852730:CDS 20.0%
!!! TAAGATATCTTATTTTGACA+CGG + chr5_4:43961616-43961635 None:intergenic 20.0%
!!! AGTGATTAATGATTTCATTT+TGG - chr5_4:43961751-43961770 Msa0852730:intron 20.0%
!! TGATAAGAATTTATAAAGAG+GGG + chr5_4:43962105-43962124 None:intergenic 20.0%
!! CTTGATAAGAATTTATAAAG+AGG + chr5_4:43962107-43962126 None:intergenic 20.0%
!! GAATAATACTAAAGTTAAAG+GGG - chr5_4:43962323-43962342 Msa0852730:CDS 20.0%
!! AAAATACAAATCTCAGAATT+TGG + chr5_4:43962923-43962942 None:intergenic 20.0%
!!! TTTAGTTTCGAATAAAAACT+GGG - chr5_4:43963211-43963230 Msa0852730:intron 20.0%
!! TTAATCAGCAAATAAAAGAT+TGG - chr5_4:43963621-43963640 Msa0852730:intron 20.0%
!! AAACAATTGGAAGTTTATAT+AGG + chr5_4:43963921-43963940 None:intergenic 20.0%
!! ATTTGCTTGAATAAAACAAT+TGG + chr5_4:43963934-43963953 None:intergenic 20.0%
!!! TTCTGTGGTAATATTAATTT+TGG + chr5_4:43964944-43964963 None:intergenic 20.0%
!! TATTACCACAGAATTAAATT+TGG - chr5_4:43964951-43964970 Msa0852730:intron 20.0%
!! ATTACCACAGAATTAAATTT+GGG - chr5_4:43964952-43964971 Msa0852730:intron 20.0%
!! ACTTGTAAATGTAATTCTAA+GGG + chr5_4:43965003-43965022 None:intergenic 20.0%
!! AACTTGTAAATGTAATTCTA+AGG + chr5_4:43965004-43965023 None:intergenic 20.0%
!! AAATCAATTGTAATATGCAA+AGG - chr5_4:43965091-43965110 Msa0852730:intron 20.0%
! TGTTGAATGAAAAAAACCAT+TGG - chr5_4:43955067-43955086 Msa0852730:three_prime_UTR 25.0%
! TTGGATAAAATATAGATAGG+AGG + chr5_4:43955258-43955277 None:intergenic 25.0%
! GGTTTGGATAAAATATAGAT+AGG + chr5_4:43955261-43955280 None:intergenic 25.0%
! ATTCTCTAATTCTTTCATCT+GGG - chr5_4:43955483-43955502 Msa0852730:three_prime_UTR 25.0%
!!! GCTTTTTTGTTTTGATGAAA+AGG - chr5_4:43955650-43955669 Msa0852730:CDS 25.0%
! TACTATGTTTCATGATATAG+TGG - chr5_4:43955727-43955746 Msa0852730:CDS 25.0%
! TCATCATACAACAAAAATGA+GGG + chr5_4:43955794-43955813 None:intergenic 25.0%
! TTCATCATACAACAAAAATG+AGG + chr5_4:43955795-43955814 None:intergenic 25.0%
! AATCACGAAATATGTATTGA+TGG - chr5_4:43956271-43956290 Msa0852730:intron 25.0%
!! ATCACGAAATATGTATTGAT+GGG - chr5_4:43956272-43956291 Msa0852730:intron 25.0%
! GCACTTATGTATCAAAATAT+TGG - chr5_4:43956401-43956420 Msa0852730:CDS 25.0%
!! CTAATCTTCTAACTGATTTA+TGG + chr5_4:43956492-43956511 None:intergenic 25.0%
! AACAATTCAGTTGTTTGATA+AGG + chr5_4:43956663-43956682 None:intergenic 25.0%
! TTGGTTTATCACATGAATAA+AGG - chr5_4:43956743-43956762 Msa0852730:intron 25.0%
! TCTCTTCATTATTCTATATG+AGG - chr5_4:43957138-43957157 Msa0852730:intron 25.0%
!! TTTAGAATGAATGATGAATC+TGG - chr5_4:43957299-43957318 Msa0852730:intron 25.0%
! GTTGAATTTCCTGATAAATA+AGG + chr5_4:43957329-43957348 None:intergenic 25.0%
! TTTGCTTTATATGTTTCACT+TGG + chr5_4:43957660-43957679 None:intergenic 25.0%
! TATCATTGACAATGTATTGT+AGG + chr5_4:43957683-43957702 None:intergenic 25.0%
! TGTATTCTATGGTAAATGAT+AGG - chr5_4:43957796-43957815 Msa0852730:intron 25.0%
!!! TTTTTTCAATACAAGTGACT+CGG - chr5_4:43957932-43957951 Msa0852730:intron 25.0%
! TCTAGAAGATAATGAAATTG+TGG - chr5_4:43958089-43958108 Msa0852730:intron 25.0%
! TTGACTGGAAAAAAAATAGA+GGG + chr5_4:43958204-43958223 None:intergenic 25.0%
! TTTGACTGGAAAAAAAATAG+AGG + chr5_4:43958205-43958224 None:intergenic 25.0%
!!! TCTATTTTTTTTCCAGTCAA+AGG - chr5_4:43958204-43958223 Msa0852730:intron 25.0%
! TATGAAATAATACCTTTGAC+TGG + chr5_4:43958219-43958238 None:intergenic 25.0%
! AACATAGGAAAACATATTTC+TGG + chr5_4:43958255-43958274 None:intergenic 25.0%
!!! TCAATTATTTTTTGACAGTG+AGG - chr5_4:43958370-43958389 Msa0852730:intron 25.0%
! TGAGTTTATAAGTATAATGG+TGG + chr5_4:43958630-43958649 None:intergenic 25.0%
! GGATGAGTTTATAAGTATAA+TGG + chr5_4:43958633-43958652 None:intergenic 25.0%
! AATATAAATGGTTCCTTGTA+TGG + chr5_4:43958842-43958861 None:intergenic 25.0%
! GAAACAAGAAATTGATCTTA+AGG - chr5_4:43958886-43958905 Msa0852730:intron 25.0%
! AAAAGATACAAAGAGAGAAA+TGG - chr5_4:43959207-43959226 Msa0852730:intron 25.0%
! AAAGATACAAAGAGAGAAAT+GGG - chr5_4:43959208-43959227 Msa0852730:intron 25.0%
! TAAACTAAGAAGTAGATTCT+GGG - chr5_4:43959330-43959349 Msa0852730:intron 25.0%
! TAAATTATAGAAGAAACCTG+TGG - chr5_4:43959851-43959870 Msa0852730:CDS 25.0%
! ATTTAATTCACTTTGACAAG+TGG - chr5_4:43960076-43960095 Msa0852730:intron 25.0%
! TGATACCATCTTAGAATTTA+TGG - chr5_4:43960480-43960499 Msa0852730:intron 25.0%
! CATCTTAGAATTTATGGTTT+GGG - chr5_4:43960486-43960505 Msa0852730:intron 25.0%
! AATGTTGTATTCATCGAAAA+GGG + chr5_4:43960997-43961016 None:intergenic 25.0%
! ATACTGATATCTTGCTTTAT+AGG - chr5_4:43961145-43961164 Msa0852730:intron 25.0%
!!! TTTATGTGGATCACTTTTTA+GGG - chr5_4:43961217-43961236 Msa0852730:CDS 25.0%
! ACTAACAGAGTAATACAAAT+AGG + chr5_4:43961727-43961746 None:intergenic 25.0%
! ATGAAAAGTTCTTTACTACA+TGG - chr5_4:43961857-43961876 Msa0852730:CDS 25.0%
!!! TCGAATTTGTCTCATTTTTT+AGG - chr5_4:43961883-43961902 Msa0852730:CDS 25.0%
! ATGAAAAGTTCTTTACTACA+TGG - chr5_4:43961857-43961876 Msa0852730:CDS 25.0%
! GATAAGAATTTATAAAGAGG+GGG + chr5_4:43962104-43962123 None:intergenic 25.0%
! TAAGCAAAAGATAGTTAAAC+AGG - chr5_4:43962282-43962301 Msa0852730:CDS 25.0%
! AAGCAAAAGATAGTTAAACA+GGG - chr5_4:43962283-43962302 Msa0852730:CDS 25.0%
! TATTATTCTAATCTGCTAGT+GGG + chr5_4:43962311-43962330 None:intergenic 25.0%
! CCTAATCATTATACAAAGTA+TGG + chr5_4:43962854-43962873 None:intergenic 25.0%
! CCATACTTTGTATAATGATT+AGG - chr5_4:43962851-43962870 Msa0852730:intron 25.0%
! TTCTGATGAATTATTGTTTC+AGG + chr5_4:43963004-43963023 None:intergenic 25.0%
! GTTTGTGTAAATGGTTTATA+TGG - chr5_4:43963158-43963177 Msa0852730:intron 25.0%
! AAACTAAAGATGTTTCAAAC+AGG + chr5_4:43963199-43963218 None:intergenic 25.0%
!! CTTTAGTTTCGAATAAAAAC+TGG - chr5_4:43963210-43963229 Msa0852730:intron 25.0%
! GAAATACATAAACACAGAAA+AGG + chr5_4:43963318-43963337 None:intergenic 25.0%
!!! GTAAATATAAGTTGATGCAA+TGG - chr5_4:43963470-43963489 Msa0852730:intron 25.0%
!!! TACATTTAGCTTTGTTGAAA+TGG - chr5_4:43963824-43963843 Msa0852730:intron 25.0%
! CTTTGTTGAAATGGAAAAAA+CGG - chr5_4:43963833-43963852 Msa0852730:intron 25.0%
!! TTCAAGCAAATCTTCTAAAA+TGG - chr5_4:43963943-43963962 Msa0852730:intron 25.0%
!! ATGTTTTACCAATATTTGAC+AGG - chr5_4:43964170-43964189 Msa0852730:intron 25.0%
!!! TCTATCTCAGAATTTTGTTT+TGG - chr5_4:43964326-43964345 Msa0852730:intron 25.0%
! GAAGAAAAATTTATTGTGGT+AGG + chr5_4:43964454-43964473 None:intergenic 25.0%
!! CTTCATTTTCGTAATTTTTG+AGG - chr5_4:43964532-43964551 Msa0852730:intron 25.0%
! TTTCAACCCAAAATTAATGT+TGG - chr5_4:43964905-43964924 Msa0852730:intron 25.0%
! TTCAACCCAAAATTAATGTT+GGG - chr5_4:43964906-43964925 Msa0852730:intron 25.0%
!! TTATGCCCAACATTAATTTT+GGG + chr5_4:43964914-43964933 None:intergenic 25.0%
! TTACCACAGAATTAAATTTG+GGG - chr5_4:43964953-43964972 Msa0852730:intron 25.0%
! TTCACAATCAGTATTAGTAT+TGG + chr5_4:43964980-43964999 None:intergenic 25.0%
!! AATTTTGTATATGCCATACA+TGG - chr5_4:43965531-43965550 Msa0852730:intron 25.0%
! ATCATAAAAACAATAGCATG+AGG - chr5_4:43965937-43965956 Msa0852730:five_prime_UTR 25.0%
! TATAAAAATGTCAAAGCCAA+TGG + chr5_4:43965986-43966005 None:intergenic 25.0%
AATGAAAAAAACCATTGGAG+AGG - chr5_4:43955072-43955091 Msa0852730:three_prime_UTR 30.0%
! ATGTTGGTTACCATTGTAAA+TGG - chr5_4:43955180-43955199 Msa0852730:three_prime_UTR 30.0%
ACTAGTAAGACCATTTACAA+TGG + chr5_4:43955193-43955212 None:intergenic 30.0%
GATAAAATATAGATAGGAGG+TGG + chr5_4:43955255-43955274 None:intergenic 30.0%
CATTAACATGAACACAAGAA+TGG + chr5_4:43955359-43955378 None:intergenic 30.0%
CATTCTTGTGTTCATGTTAA+TGG - chr5_4:43955357-43955376 Msa0852730:three_prime_UTR 30.0%
AGAAACAAAACAAACCTCTT+TGG + chr5_4:43955460-43955479 None:intergenic 30.0%
CATTCTCTAATTCTTTCATC+TGG - chr5_4:43955482-43955501 Msa0852730:three_prime_UTR 30.0%
TAACCTAAACTAAACCAACA+TGG + chr5_4:43955629-43955648 None:intergenic 30.0%
!! TTATTGTTGTTTGGTAGAGA+GGG - chr5_4:43955691-43955710 Msa0852730:CDS 30.0%
TTCATGATATAGTGGTAGTA+AGG - chr5_4:43955735-43955754 Msa0852730:CDS 30.0%
TCATGATATAGTGGTAGTAA+GGG - chr5_4:43955736-43955755 Msa0852730:CDS 30.0%
! TAGTGTGGATTGTAAATGAT+TGG - chr5_4:43955763-43955782 Msa0852730:CDS 30.0%
TCATAGATAGATTTGAAGAG+AGG - chr5_4:43955933-43955952 Msa0852730:intron 30.0%
AGCTAGTTAAGCTAATCATT+TGG + chr5_4:43955995-43956014 None:intergenic 30.0%
ACTGAACAAACAATAACAGA+AGG + chr5_4:43956076-43956095 None:intergenic 30.0%
TTATGGTACAATTGTGTTCT+CGG + chr5_4:43956155-43956174 None:intergenic 30.0%
GTGAAAACTAATAAGCGTTA+TGG + chr5_4:43956172-43956191 None:intergenic 30.0%
! TAGTTAGTTGTTGTACTGAT+TGG - chr5_4:43956208-43956227 Msa0852730:intron 30.0%
ATGTATCAAAATATTGGGAC+AGG - chr5_4:43956407-43956426 Msa0852730:CDS 30.0%
AGATTCTACTGAAATACAAC+TGG + chr5_4:43956714-43956733 None:intergenic 30.0%
TTATCACATGAATAAAGGAC+CGG - chr5_4:43956748-43956767 Msa0852730:intron 30.0%
AAATTAAAGTAGTACCCTGA+CGG - chr5_4:43956873-43956892 Msa0852730:CDS 30.0%
!! GCTTGTTATGAACATATCAA+TGG + chr5_4:43956919-43956938 None:intergenic 30.0%
TCATTATTCTATATGAGGCA+AGG - chr5_4:43957143-43957162 Msa0852730:intron 30.0%
! TACATTAAGAAAGCATGATG+CGG + chr5_4:43957268-43957287 None:intergenic 30.0%
CATCATTCATTCTAAACTAG+AGG + chr5_4:43957295-43957314 None:intergenic 30.0%
AATTTCCTGATAAATAAGGC+AGG + chr5_4:43957325-43957344 None:intergenic 30.0%
ACACTGTAGTATGTATTCTA+TGG - chr5_4:43957785-43957804 Msa0852730:intron 30.0%
ATTCTATGGTAAATGATAGG+AGG - chr5_4:43957799-43957818 Msa0852730:intron 30.0%
AAGATAATGAAATTGTGGTG+AGG - chr5_4:43958094-43958113 Msa0852730:intron 30.0%
AGATAATGAAATTGTGGTGA+GGG - chr5_4:43958095-43958114 Msa0852730:intron 30.0%
! TCTTCAGGAAATCATTTTCA+AGG + chr5_4:43958328-43958347 None:intergenic 30.0%
TTCTCAGAAAGAACGTTAAT+AGG + chr5_4:43958428-43958447 None:intergenic 30.0%
TAATGACATTGTGAAAGAAC+AGG - chr5_4:43958535-43958554 Msa0852730:intron 30.0%
! TAAGTATAATGGTGGAAACA+GGG + chr5_4:43958622-43958641 None:intergenic 30.0%
! ATAAGTATAATGGTGGAAAC+AGG + chr5_4:43958623-43958642 None:intergenic 30.0%
AATTCTTTGCATGGTACATA+TGG + chr5_4:43958654-43958673 None:intergenic 30.0%
TTGTCTTTCAGAAGTTCTTA+AGG - chr5_4:43959033-43959052 Msa0852730:intron 30.0%
GTTCTTAAGGAAAATGTGAA+TGG - chr5_4:43959046-43959065 Msa0852730:intron 30.0%
AATAACGGTTCTCTTTCTTT+AGG - chr5_4:43959148-43959167 Msa0852730:intron 30.0%
! TCTCTCTTTGTATCTTTTGT+TGG + chr5_4:43959205-43959224 None:intergenic 30.0%
GAGAAATGGGAGAAAATAAA+TGG - chr5_4:43959221-43959240 Msa0852730:intron 30.0%
! AACAACTTGGACAACTATTT+TGG + chr5_4:43959266-43959285 None:intergenic 30.0%
CAGAATCTACTTCTTAGTTT+AGG + chr5_4:43959331-43959350 None:intergenic 30.0%
CTAAACTAAGAAGTAGATTC+TGG - chr5_4:43959329-43959348 Msa0852730:intron 30.0%
GATGATTTATGAGAAAGAAC+AGG + chr5_4:43959405-43959424 None:intergenic 30.0%
ACTACACGTTGTGATAAAAT+TGG - chr5_4:43959471-43959490 Msa0852730:intron 30.0%
!! TTCGACTTGGAAAAACATAA+TGG - chr5_4:43959641-43959660 Msa0852730:intron 30.0%
TTAAACATCCTAGAGTTCAT+TGG + chr5_4:43959815-43959834 None:intergenic 30.0%
ATCAGAAGATATTATACCAC+AGG + chr5_4:43959870-43959889 None:intergenic 30.0%
CAGTTTATATGATATGCTTC+AGG - chr5_4:43959892-43959911 Msa0852730:intron 30.0%
! TATGCTTCAGGTTAAGAAAA+TGG - chr5_4:43959904-43959923 Msa0852730:intron 30.0%
TTTCCATATGTGAACAACAT+TGG - chr5_4:43960014-43960033 Msa0852730:intron 30.0%
!! TGTTTTTGCTAACTCTATGA+GGG + chr5_4:43960049-43960068 None:intergenic 30.0%
TAGAGTTAGCAAAAACAGTA+AGG - chr5_4:43960052-43960071 Msa0852730:intron 30.0%
CAGAACAAGTGTTTATAAGT+GGG + chr5_4:43960329-43960348 None:intergenic 30.0%
! CCAAACCATAAATTCTAAGA+TGG + chr5_4:43960488-43960507 None:intergenic 30.0%
CCATCTTAGAATTTATGGTT+TGG - chr5_4:43960485-43960504 Msa0852730:intron 30.0%
!!! AACAGTTTTAAAAATCGGAC+CGG - chr5_4:43960586-43960605 Msa0852730:intron 30.0%
CTAATTGAATCATGATCAGT+AGG + chr5_4:43960629-43960648 None:intergenic 30.0%
TATTACAGTACATATCAACC+AGG + chr5_4:43960792-43960811 None:intergenic 30.0%
ATGTTGTATTCATCGAAAAG+GGG + chr5_4:43960996-43961015 None:intergenic 30.0%
CAATGTTGTATTCATCGAAA+AGG + chr5_4:43960998-43961017 None:intergenic 30.0%
TTCGATGAATACAACATTGA+AGG - chr5_4:43960999-43961018 Msa0852730:intron 30.0%
TACACAATATAAGCATGAGA+TGG + chr5_4:43961085-43961104 None:intergenic 30.0%
AACAGACTACTATAAAGACA+TGG + chr5_4:43961112-43961131 None:intergenic 30.0%
!!! CTTTATGTGGATCACTTTTT+AGG - chr5_4:43961216-43961235 Msa0852730:CDS 30.0%
GTTTCTATTGATGTAAATGG+AGG - chr5_4:43961290-43961309 Msa0852730:intron 30.0%
ATTAATGCAGTTGGTCATTT+AGG - chr5_4:43961798-43961817 Msa0852730:CDS 30.0%
GAATTTCAATAAACTGCTAC+TGG + chr5_4:43961826-43961845 None:intergenic 30.0%
GAATTTCAATAAACTGCTAC+TGG + chr5_4:43961826-43961845 None:intergenic 30.0%
! AAGAGATAGTCAGGATTTTT+AGG - chr5_4:43962013-43962032 Msa0852730:CDS 30.0%
GCAACTCAAATATTGCAATT+AGG - chr5_4:43962180-43962199 Msa0852730:CDS 30.0%
TGACGAAATTCAAATTCTGT+TGG + chr5_4:43962239-43962258 None:intergenic 30.0%
GTATTATTCTAATCTGCTAG+TGG + chr5_4:43962312-43962331 None:intergenic 30.0%
AGGAATTGGAAATTGTTAAG+TGG - chr5_4:43962401-43962420 Msa0852730:CDS 30.0%
ATATTTGTCAATGTGGGATA+AGG + chr5_4:43962817-43962836 None:intergenic 30.0%
ATCCCACATTGACAAATATA+TGG - chr5_4:43962818-43962837 Msa0852730:CDS 30.0%
GACCATATATTTGTCAATGT+GGG + chr5_4:43962823-43962842 None:intergenic 30.0%
TGACCATATATTTGTCAATG+TGG + chr5_4:43962824-43962843 None:intergenic 30.0%
TATTTCATTGTTGACGATCA+TGG - chr5_4:43962968-43962987 Msa0852730:CDS 30.0%
TAATGTGTTACAGATTGCAA+GGG - chr5_4:43963052-43963071 Msa0852730:CDS 30.0%
TTCATTGATATGACAGATGA+AGG - chr5_4:43963116-43963135 Msa0852730:CDS 30.0%
TTTCGAATAAAAACTGGGAA+GGG - chr5_4:43963216-43963235 Msa0852730:intron 30.0%
CATGTCAAGAAATCTAAACT+AGG + chr5_4:43963343-43963362 None:intergenic 30.0%
GAAAACTATCCTTAATGACA+AGG - chr5_4:43963383-43963402 Msa0852730:intron 30.0%
TCGATGCTAGAATACTTAAT+CGG + chr5_4:43963428-43963447 None:intergenic 30.0%
ATGCAATGGTATATATCCTA+GGG - chr5_4:43963484-43963503 Msa0852730:intron 30.0%
! ATATGAACTATTTTGTCCCT+AGG + chr5_4:43963503-43963522 None:intergenic 30.0%
!!! TTTTTTATGCCAAGCTGAAA+TGG - chr5_4:43963523-43963542 Msa0852730:intron 30.0%
TCTGATTCTGATAACATCAA+GGG + chr5_4:43963554-43963573 None:intergenic 30.0%
CTATGTGTTAGTTCATGAAA+CGG - chr5_4:43963773-43963792 Msa0852730:CDS 30.0%
AAAGCTAAATGTAAGCATAG+TGG + chr5_4:43963817-43963836 None:intergenic 30.0%
!! CTGTTATTTAAGTTGCATTC+TGG - chr5_4:43964089-43964108 Msa0852730:intron 30.0%
CTAAAATTGATCGAGTGATA+TGG + chr5_4:43964125-43964144 None:intergenic 30.0%
!! TTGCTGTTCAATTTTGAAGA+AGG + chr5_4:43964277-43964296 None:intergenic 30.0%
!!! TTGTTTTGGCAATAAGATCA+TGG - chr5_4:43964340-43964359 Msa0852730:intron 30.0%
!!! TGTTTTGGCAATAAGATCAT+GGG - chr5_4:43964341-43964360 Msa0852730:intron 30.0%
TGTTCTGTAAGATGAAGTTT+AGG - chr5_4:43964396-43964415 Msa0852730:intron 30.0%
TGCACTATAGCAAACTTATA+AGG + chr5_4:43964426-43964445 None:intergenic 30.0%
! TCAACCCTCAGAATAAATTT+TGG + chr5_4:43964649-43964668 None:intergenic 30.0%
! GTTATGCCCAACATTAATTT+TGG + chr5_4:43964915-43964934 None:intergenic 30.0%
TAATTATTGCTCAGAAATGC+AGG + chr5_4:43965321-43965340 None:intergenic 30.0%
GAGTGATAAAATCAAAAGCT+AGG - chr5_4:43965478-43965497 Msa0852730:intron 30.0%
GTATGGCATATACAAAATTC+TGG + chr5_4:43965530-43965549 None:intergenic 30.0%
TTGGAAGAGCAAAAATAATC+TGG - chr5_4:43965590-43965609 Msa0852730:intron 30.0%
! AACAAAATGCTCCTTTTATG+AGG + chr5_4:43965683-43965702 None:intergenic 30.0%
!!! CTTTCATTGCCATTGTTTTT+TGG + chr5_4:43965764-43965783 None:intergenic 30.0%
CAAAAAACAATGGCAATGAA+AGG - chr5_4:43965762-43965781 Msa0852730:exon 30.0%
AAAGGATGAAAAAGTGAAAG+TGG - chr5_4:43965780-43965799 Msa0852730:five_prime_UTR 30.0%
GATGTAAAAAATGCTTACTC+TGG + chr5_4:43965833-43965852 None:intergenic 30.0%
TTCAACTTTAACCTCTCCAA+TGG + chr5_4:43955086-43955105 None:intergenic 35.0%
TTAAGAGAGAGAAGATGATG+TGG - chr5_4:43955117-43955136 Msa0852730:three_prime_UTR 35.0%
! AGTGTTGGGAATTGAAAAAG+TGG - chr5_4:43955140-43955159 Msa0852730:three_prime_UTR 35.0%
GTGTTGGGAATTGAAAAAGT+GGG - chr5_4:43955141-43955160 Msa0852730:three_prime_UTR 35.0%
!! ATTGAAAAAGTGGGTGTTGA+AGG - chr5_4:43955150-43955169 Msa0852730:three_prime_UTR 35.0%
!! TTGAAAAAGTGGGTGTTGAA+GGG - chr5_4:43955151-43955170 Msa0852730:three_prime_UTR 35.0%
!! TGTTGAAGGGTGTTTAATGT+TGG - chr5_4:43955164-43955183 Msa0852730:three_prime_UTR 35.0%
! AAATGGTCTTACTAGTAAGC+TGG - chr5_4:43955197-43955216 Msa0852730:three_prime_UTR 35.0%
ATGGAGTTTATTGCTGAAGT+TGG - chr5_4:43955376-43955395 Msa0852730:three_prime_UTR 35.0%
AGTGTGTAAGGATTAGAGAA+GGG + chr5_4:43955433-43955452 None:intergenic 35.0%
AAGTGTGTAAGGATTAGAGA+AGG + chr5_4:43955434-43955453 None:intergenic 35.0%
! ATTGTTCCTTTTCACCATGT+TGG - chr5_4:43955612-43955631 Msa0852730:three_prime_UTR 35.0%
ACTAAACCAACATGGTGAAA+AGG + chr5_4:43955621-43955640 None:intergenic 35.0%
!! TCACCATGTTGGTTTAGTTT+AGG - chr5_4:43955623-43955642 Msa0852730:three_prime_UTR 35.0%
!! CTTATTGTTGTTTGGTAGAG+AGG - chr5_4:43955690-43955709 Msa0852730:CDS 35.0%
TTGATGGGATGATTGAAGAT+AGG - chr5_4:43956287-43956306 Msa0852730:intron 35.0%
AATCTATATTCTCCGTGTAG+CGG + chr5_4:43956451-43956470 None:intergenic 35.0%
CAACAAGAGCTTACAAAAAG+AGG + chr5_4:43956549-43956568 None:intergenic 35.0%
! CTCTTTTTGTAAGCTCTTGT+TGG - chr5_4:43956547-43956566 Msa0852730:intron 35.0%
!!! CATGCTTTAACTTGTTTTGC+TGG - chr5_4:43956635-43956654 Msa0852730:intron 35.0%
! AGTAGAATCTGATTCGAGTT+TGG - chr5_4:43956724-43956743 Msa0852730:intron 35.0%
! ACAGATGCAAGTTTTCCTTT+TGG - chr5_4:43957232-43957251 Msa0852730:intron 35.0%
ATGATCTGTGCAAGATTGTT+TGG - chr5_4:43957360-43957379 Msa0852730:intron 35.0%
! GTAGAAGCTGATTTAGAAGA+TGG - chr5_4:43957386-43957405 Msa0852730:intron 35.0%
TATTTGGAAAGCTGAATCTC+AGG - chr5_4:43957499-43957518 Msa0852730:intron 35.0%
CTGAATCTCAGGTAATATCA+CGG - chr5_4:43957510-43957529 Msa0852730:intron 35.0%
TGAATCTCAGGTAATATCAC+GGG - chr5_4:43957511-43957530 Msa0852730:intron 35.0%
GAGAAGATGTTTCAACATTG+AGG - chr5_4:43957579-43957598 Msa0852730:intron 35.0%
ACACGACTCTTCTATAACAT+GGG + chr5_4:43957717-43957736 None:intergenic 35.0%
GAATACATACTACAGTGTTG+CGG + chr5_4:43957783-43957802 None:intergenic 35.0%
!! ATGAAAGGAGCACTATGATT+TGG + chr5_4:43957851-43957870 None:intergenic 35.0%
! TTTACCTTGCAGATTGCTTT+TGG - chr5_4:43957961-43957980 Msa0852730:intron 35.0%
! CTTCCAAATAATGTCACTTG+AGG + chr5_4:43958031-43958050 None:intergenic 35.0%
!! TTATCTTCTAGAACTGTCAG+AGG + chr5_4:43958081-43958100 None:intergenic 35.0%
AAATTGTGGTGAGGGATTTA+TGG - chr5_4:43958103-43958122 Msa0852730:intron 35.0%
! AGCTGAAGAAGTATGGAAAT+TGG + chr5_4:43958136-43958155 None:intergenic 35.0%
!! AGGAAAACATATTTCTGGAG+TGG + chr5_4:43958250-43958269 None:intergenic 35.0%
GTTTGAGTGTTCAGAAACAT+AGG + chr5_4:43958270-43958289 None:intergenic 35.0%
ATCTTCCAAAATGAGTGTCT+CGG + chr5_4:43958351-43958370 None:intergenic 35.0%
!!! ATTTTTTGACAGTGAGGACA+TGG - chr5_4:43958376-43958395 Msa0852730:intron 35.0%
!! CATGGCGATTTTGAGTAATA+AGG - chr5_4:43958394-43958413 Msa0852730:intron 35.0%
ATTGTATTACTGCTCTCTTC+AGG + chr5_4:43958590-43958609 None:intergenic 35.0%
CAAAGCGATAGTGTATATGT+GGG - chr5_4:43958734-43958753 Msa0852730:intron 35.0%
AAAGCGATAGTGTATATGTG+GGG - chr5_4:43958735-43958754 Msa0852730:intron 35.0%
! ACAAAGCTTGTTCCTTCTAT+GGG - chr5_4:43958764-43958783 Msa0852730:intron 35.0%
TATGGACATTAAGCCATACA+AGG - chr5_4:43958826-43958845 Msa0852730:intron 35.0%
ATCATCCTCAGAATGTATGT+CGG + chr5_4:43958960-43958979 None:intergenic 35.0%
TCTCTTTCTTTAGGCATGAA+TGG - chr5_4:43959157-43959176 Msa0852730:intron 35.0%
CTCTTTCTTTAGGCATGAAT+GGG - chr5_4:43959158-43959177 Msa0852730:intron 35.0%
AAATGGATCCAAGTTCGTAA+CGG - chr5_4:43959238-43959257 Msa0852730:intron 35.0%
AGTTGTCCAAGTTGTTAAAG+AGG - chr5_4:43959270-43959289 Msa0852730:intron 35.0%
GTTGTCCAAGTTGTTAAAGA+GGG - chr5_4:43959271-43959290 Msa0852730:intron 35.0%
ATACCTCATGAAATGTCCTT+GGG + chr5_4:43959940-43959959 None:intergenic 35.0%
AAGCCAATGTTGTTCACATA+TGG + chr5_4:43960020-43960039 None:intergenic 35.0%
! GTTTTTGCTAACTCTATGAG+GGG + chr5_4:43960048-43960067 None:intergenic 35.0%
!!! CTGTTTTTGCTAACTCTATG+AGG + chr5_4:43960050-43960069 None:intergenic 35.0%
! TGGCATTTTCTAACAGAAAG+TGG + chr5_4:43960150-43960169 None:intergenic 35.0%
! TCCTCACAAGTCAATTTTGT+GGG + chr5_4:43960301-43960320 None:intergenic 35.0%
CCAGAACAAGTGTTTATAAG+TGG + chr5_4:43960330-43960349 None:intergenic 35.0%
CCACTTATAAACACTTGTTC+TGG - chr5_4:43960327-43960346 Msa0852730:intron 35.0%
TGGCCATATCATTTCCAATT+TGG - chr5_4:43960347-43960366 Msa0852730:intron 35.0%
GGCCATATCATTTCCAATTT+GGG - chr5_4:43960348-43960367 Msa0852730:intron 35.0%
GTCCCAAATTGGAAATGATA+TGG + chr5_4:43960353-43960372 None:intergenic 35.0%
TGAGCATGTGTTTATAAGTG+TGG + chr5_4:43960554-43960573 None:intergenic 35.0%
AACCAGACTGTAGTATAAGT+GGG - chr5_4:43960743-43960762 Msa0852730:intron 35.0%
TTGACAATATCCTCAGCAAA+AGG - chr5_4:43961027-43961046 Msa0852730:intron 35.0%
ATTGATGTAAATGGAGGACA+TGG - chr5_4:43961296-43961315 Msa0852730:intron 35.0%
TTGATGTAAATGGAGGACAT+GGG - chr5_4:43961297-43961316 Msa0852730:intron 35.0%
! ATCTAGAATAGCTTTCTCCT+TGG + chr5_4:43961342-43961361 None:intergenic 35.0%
TGTGAGTGTATTAATGCAGT+TGG - chr5_4:43961789-43961808 Msa0852730:intron 35.0%
TTGCTTGTAAAGAGATAGTC+AGG - chr5_4:43962004-43962023 Msa0852730:CDS 35.0%
!! AGATAGTCAGGATTTTTAGG+AGG - chr5_4:43962016-43962035 Msa0852730:CDS 35.0%
!! GATAGTCAGGATTTTTAGGA+GGG - chr5_4:43962017-43962036 Msa0852730:CDS 35.0%
AGGGAATGTGTTGAAATTTG+TGG - chr5_4:43962036-43962055 Msa0852730:CDS 35.0%
!!! TGGTTTTGTAAGGATGAGTT+AGG + chr5_4:43962062-43962081 None:intergenic 35.0%
!!! ATATTTGAGTTGCCTCGTTT+TGG + chr5_4:43962173-43962192 None:intergenic 35.0%
CTAAGTGAGGATCACAATAA+AGG - chr5_4:43962206-43962225 Msa0852730:CDS 35.0%
AAGTGTACGTTTGTAGGAAT+TGG - chr5_4:43962387-43962406 Msa0852730:CDS 35.0%
TGGAAATTGTTAAGTGGTCT+TGG - chr5_4:43962407-43962426 Msa0852730:CDS 35.0%
GGAAATTGTTAAGTGGTCTT+GGG - chr5_4:43962408-43962427 Msa0852730:CDS 35.0%
GTGAAAACTCATGAATGACT+TGG + chr5_4:43962477-43962496 None:intergenic 35.0%
! GAGTTTTCACCTAACATCTT+AGG - chr5_4:43962487-43962506 Msa0852730:CDS 35.0%
! CACCTAACATCTTAGGTTTT+AGG - chr5_4:43962494-43962513 Msa0852730:CDS 35.0%
CTCCTAAAACCTAAGATGTT+AGG + chr5_4:43962499-43962518 None:intergenic 35.0%
!!! GTTTTAGGAGAGTTGATCAT+TGG - chr5_4:43962509-43962528 Msa0852730:CDS 35.0%
AATCTTGATCACTTGGTCAA+AGG + chr5_4:43962549-43962568 None:intergenic 35.0%
AGACATGAATCTTGATCACT+TGG + chr5_4:43962556-43962575 None:intergenic 35.0%
ATCTCCATTCTTCTTAGATG+AGG - chr5_4:43962580-43962599 Msa0852730:CDS 35.0%
TCAACCTCATCTAAGAAGAA+TGG + chr5_4:43962587-43962606 None:intergenic 35.0%
! TCTTAGATGAGGTTGAGTTT+TGG - chr5_4:43962591-43962610 Msa0852730:CDS 35.0%
TGAAGCATGGATAATACACA+GGG + chr5_4:43962639-43962658 None:intergenic 35.0%
TTGAAGCATGGATAATACAC+AGG + chr5_4:43962640-43962659 None:intergenic 35.0%
CTAATGTGTTACAGATTGCA+AGG - chr5_4:43963051-43963070 Msa0852730:CDS 35.0%
! CTACGACTTGTTTGTGTAAA+TGG - chr5_4:43963149-43963168 Msa0852730:CDS 35.0%
GTTTCGAATAAAAACTGGGA+AGG - chr5_4:43963215-43963234 Msa0852730:intron 35.0%
AGAAAAGGAAGAGGCTTAAA+AGG + chr5_4:43963303-43963322 None:intergenic 35.0%
CATAAACACAGAAAAGGAAG+AGG + chr5_4:43963312-43963331 None:intergenic 35.0%
GTCAAGAAATCTAAACTAGG+TGG + chr5_4:43963340-43963359 None:intergenic 35.0%
ACTATCCTTAATGACAAGGT+AGG - chr5_4:43963387-43963406 Msa0852730:intron 35.0%
CTATCCTTAATGACAAGGTA+GGG - chr5_4:43963388-43963407 Msa0852730:intron 35.0%
GATGCAATGGTATATATCCT+AGG - chr5_4:43963483-43963502 Msa0852730:intron 35.0%
GTCTGATTCTGATAACATCA+AGG + chr5_4:43963555-43963574 None:intergenic 35.0%
TCATGGAAATAACACGAAAG+AGG - chr5_4:43963719-43963738 Msa0852730:CDS 35.0%
CATGGAAATAACACGAAAGA+GGG - chr5_4:43963720-43963739 Msa0852730:CDS 35.0%
AATGGAAAAAACGGACACAA+AGG - chr5_4:43963842-43963861 Msa0852730:intron 35.0%
! TTGAGGTAAGAAAAGCATAG+AGG + chr5_4:43964011-43964030 None:intergenic 35.0%
!! ATCACTCGATCAATTTTAGC+AGG - chr5_4:43964126-43964145 Msa0852730:intron 35.0%
!! GTTTTGGCAATAAGATCATG+GGG - chr5_4:43964342-43964361 Msa0852730:intron 35.0%
!! ATAAATTTTGGCCAGGACTT+AGG + chr5_4:43964637-43964656 None:intergenic 35.0%
CTGGCCAAAATTTATTCTGA+GGG - chr5_4:43964642-43964661 Msa0852730:CDS 35.0%
TCAAGTACGTACACATATGA+TGG + chr5_4:43964672-43964691 None:intergenic 35.0%
TCAGGGAAAAAGACAAAACT+TGG - chr5_4:43964694-43964713 Msa0852730:CDS 35.0%
CAAAGTCTGGATTCACTTAA+AGG - chr5_4:43964735-43964754 Msa0852730:intron 35.0%
! TTAGCTGTTTCCAATTCTTC+AGG - chr5_4:43965338-43965357 Msa0852730:intron 35.0%
TTTGATCTCAAAAGTTCCTC+TGG + chr5_4:43965379-43965398 None:intergenic 35.0%
! CATCAAGTTGCCATTTCAAA+GGG - chr5_4:43965432-43965451 Msa0852730:intron 35.0%
! ACTCGAACAAGAGTAGATTT+TGG + chr5_4:43965462-43965481 None:intergenic 35.0%
TCAAAAGCTAGGTGAAATAG+AGG - chr5_4:43965489-43965508 Msa0852730:intron 35.0%
TGAGAGTCAGAGTTAGAAAT+CGG - chr5_4:43965622-43965641 Msa0852730:intron 35.0%
AGTTAGAAATCGGCTGTTAT+AGG - chr5_4:43965632-43965651 Msa0852730:intron 35.0%
! ATGCTCCTTTTATGAGGTTT+GGG + chr5_4:43965677-43965696 None:intergenic 35.0%
! AATGCTCCTTTTATGAGGTT+TGG + chr5_4:43965678-43965697 None:intergenic 35.0%
AGAATCTACAGCAATGATCA+TGG - chr5_4:43965854-43965873 Msa0852730:five_prime_UTR 35.0%
!! GTATCATTTTTCCTTCAGAC+AGG + chr5_4:43965892-43965911 None:intergenic 35.0%
AAATGTCAAAGCCAATGGAT+TGG + chr5_4:43965981-43966000 None:intergenic 35.0%
! AGAAGATGATGTGGAGTGTT+GGG - chr5_4:43955126-43955145 Msa0852730:three_prime_UTR 40.0%
AGCTGGAAACCGTTATATTG+TGG - chr5_4:43955214-43955233 Msa0852730:three_prime_UTR 40.0%
GCTGGAAACCGTTATATTGT+GGG - chr5_4:43955215-43955234 Msa0852730:three_prime_UTR 40.0%
! AAAGAGTGTGGGAAATGAAG+AGG + chr5_4:43955282-43955301 None:intergenic 40.0%
AATGGAATTTGACAGTGACG+AGG + chr5_4:43955341-43955360 None:intergenic 40.0%
AGGGTGTGAAAAAGTGATGA+GGG + chr5_4:43955414-43955433 None:intergenic 40.0%
! AAGGGTGTGAAAAAGTGATG+AGG + chr5_4:43955415-43955434 None:intergenic 40.0%
! CTCTTTGGTGAAAGTGTGTA+AGG + chr5_4:43955445-43955464 None:intergenic 40.0%
CTTACACACTTTCACCAAAG+AGG - chr5_4:43955443-43955462 Msa0852730:three_prime_UTR 40.0%
ATTTGACGACTAAGTGAACG+CGG + chr5_4:43955873-43955892 None:intergenic 40.0%
AGATTTGAAGAGAGGTTTCG+TGG - chr5_4:43955941-43955960 Msa0852730:intron 40.0%
! TCTAACCTAGCTGAAGCTTT+TGG - chr5_4:43956040-43956059 Msa0852730:intron 40.0%
AGAATCCAAAAGCTTCAGCT+AGG + chr5_4:43956048-43956067 None:intergenic 40.0%
AAGCTACACGTCTAGCAAAT+GGG + chr5_4:43956246-43956265 None:intergenic 40.0%
TAAGCTACACGTCTAGCAAA+TGG + chr5_4:43956247-43956266 None:intergenic 40.0%
TCATTCACAACAACGCAGAA+AGG - chr5_4:43956514-43956533 Msa0852730:CDS 40.0%
ACAACTGGAAGTCGCATATT+TGG + chr5_4:43956699-43956718 None:intergenic 40.0%
TGCTGCAACAACTTTCTTCA+TGG - chr5_4:43957079-43957098 Msa0852730:intron 40.0%
GTCATCTCCTGTACATAACT+GGG - chr5_4:43957408-43957427 Msa0852730:CDS 40.0%
TCATCTCCTGTACATAACTG+GGG - chr5_4:43957409-43957428 Msa0852730:CDS 40.0%
GACATTAGTACAGCCATGTT+GGG + chr5_4:43957461-43957480 None:intergenic 40.0%
AGACATTAGTACAGCCATGT+TGG + chr5_4:43957462-43957481 None:intergenic 40.0%
CAAATATTAGTGTGCTCCGT+AGG + chr5_4:43957485-43957504 None:intergenic 40.0%
CTACGGAGCACACTAATATT+TGG - chr5_4:43957483-43957502 Msa0852730:CDS 40.0%
GAATCTCAGGTAATATCACG+GGG - chr5_4:43957512-43957531 Msa0852730:intron 40.0%
!!! TGCTGAGCAGAGTTTTGAAT+AGG - chr5_4:43957624-43957643 Msa0852730:intron 40.0%
CACACGACTCTTCTATAACA+TGG + chr5_4:43957718-43957737 None:intergenic 40.0%
!! AAAGGAGCACTATGATTTGG+TGG + chr5_4:43957848-43957867 None:intergenic 40.0%
GGTCCTCAAGTGACATTATT+TGG - chr5_4:43958025-43958044 Msa0852730:CDS 40.0%
AGTGACATTATTTGGAAGCC+TGG - chr5_4:43958033-43958052 Msa0852730:CDS 40.0%
! GGTACTGAAAGAGAAAATGC+TGG + chr5_4:43958060-43958079 None:intergenic 40.0%
TGGTGAGGGATTTATGGATT+AGG - chr5_4:43958109-43958128 Msa0852730:intron 40.0%
ATGCATGAGCTGAAGAAGTA+TGG + chr5_4:43958143-43958162 None:intergenic 40.0%
ATACTTCTTCAGCTCATGCA+TGG - chr5_4:43958142-43958161 Msa0852730:intron 40.0%
GTTTCTGAACACTCAAACAG+TGG - chr5_4:43958272-43958291 Msa0852730:intron 40.0%
GTTACTCCATTCACTGCATT+CGG - chr5_4:43958472-43958491 Msa0852730:intron 40.0%
AGATAACCGAATGCAGTGAA+TGG + chr5_4:43958481-43958500 None:intergenic 40.0%
TGTGAAAGAACAGGTGAAGT+TGG - chr5_4:43958544-43958563 Msa0852730:intron 40.0%
CAGTACTGCAATTCTTTGCA+TGG + chr5_4:43958663-43958682 None:intergenic 40.0%
CATGCAAAGAATTGCAGTAC+TGG - chr5_4:43958661-43958680 Msa0852730:intron 40.0%
! AGTACTGGAGGATGAAAAAC+TGG - chr5_4:43958676-43958695 Msa0852730:intron 40.0%
!! CTTTGCACATTAGTCTTCAC+TGG + chr5_4:43958719-43958738 None:intergenic 40.0%
GCAAAGCGATAGTGTATATG+TGG - chr5_4:43958733-43958752 Msa0852730:intron 40.0%
AAGCGATAGTGTATATGTGG+GGG - chr5_4:43958736-43958755 Msa0852730:intron 40.0%
! CACAAAGCTTGTTCCTTCTA+TGG - chr5_4:43958763-43958782 Msa0852730:intron 40.0%
GAGGAGCTCTTGTTGATATT+GGG - chr5_4:43958786-43958805 Msa0852730:intron 40.0%
GAATTCTAGACCCTCTCTTA+TGG - chr5_4:43958808-43958827 Msa0852730:intron 40.0%
GGCTTAATGTCCATAAGAGA+GGG + chr5_4:43958821-43958840 None:intergenic 40.0%
TGGCTTAATGTCCATAAGAG+AGG + chr5_4:43958822-43958841 None:intergenic 40.0%
CGAAATGGGGGGAATATAAA+TGG + chr5_4:43958854-43958873 None:intergenic 40.0%
TCTTTGTCCTTCGACGAAAT+GGG + chr5_4:43958868-43958887 None:intergenic 40.0%
TTCTTTGTCCTTCGACGAAA+TGG + chr5_4:43958869-43958888 None:intergenic 40.0%
AATACCCGACATACATTCTG+AGG - chr5_4:43958952-43958971 Msa0852730:intron 40.0%
TCATCCTCAGAATGTATGTC+GGG + chr5_4:43958959-43958978 None:intergenic 40.0%
! GGAAAATGTGAATGGTAGTG+TGG - chr5_4:43959054-43959073 Msa0852730:intron 40.0%
! TGAAGTAGAAGCTGACTTTG+AGG - chr5_4:43959084-43959103 Msa0852730:intron 40.0%
! TGACTTTGAGGATGATGTTG+AGG - chr5_4:43959096-43959115 Msa0852730:intron 40.0%
! GACTTTGAGGATGATGTTGA+GGG - chr5_4:43959097-43959116 Msa0852730:intron 40.0%
GGAGCTGATGTTCATATAGA+AGG - chr5_4:43959118-43959137 Msa0852730:intron 40.0%
!!! TTTTGGTTCCGTTACGAACT+TGG + chr5_4:43959249-43959268 None:intergenic 40.0%
CAAGACCCTCTTTAACAACT+TGG + chr5_4:43959279-43959298 None:intergenic 40.0%
CAAGTTGTTAAAGAGGGTCT+TGG - chr5_4:43959277-43959296 Msa0852730:intron 40.0%
TTAGGAAAAGCAGTCAGAGT+GGG + chr5_4:43959313-43959332 None:intergenic 40.0%
TTTAGGAAAAGCAGTCAGAG+TGG + chr5_4:43959314-43959333 None:intergenic 40.0%
!! AATTAGACTTGCTGACCTGT+AGG - chr5_4:43959443-43959462 Msa0852730:intron 40.0%
AACGTGTAGTCAAAACCTAC+AGG + chr5_4:43959461-43959480 None:intergenic 40.0%
GGAGTCTCCAAAAAGATTTC+TGG - chr5_4:43959492-43959511 Msa0852730:intron 40.0%
AACTTTCAACCTTGTGCACT+CGG + chr5_4:43959520-43959539 None:intergenic 40.0%
!!! TGTTCCTGCTATTTTGCACA+GGG - chr5_4:43959713-43959732 Msa0852730:intron 40.0%
AGTTCACTCCAATGAACTCT+AGG - chr5_4:43959804-43959823 Msa0852730:CDS 40.0%
! GCTTCAGGTTAAGAAAATGG+TGG - chr5_4:43959907-43959926 Msa0852730:intron 40.0%
TACCTCATGAAATGTCCTTG+GGG + chr5_4:43959939-43959958 None:intergenic 40.0%
CATACCTCATGAAATGTCCT+TGG + chr5_4:43959941-43959960 None:intergenic 40.0%
GATAAGATTCTGCAGGCTTT+GGG + chr5_4:43960173-43960192 None:intergenic 40.0%
AGATAAGATTCTGCAGGCTT+TGG + chr5_4:43960174-43960193 None:intergenic 40.0%
TGTGTGAGATAAGATTCTGC+AGG + chr5_4:43960180-43960199 None:intergenic 40.0%
CTGAATCAGCATGCTGATAT+AGG + chr5_4:43960225-43960244 None:intergenic 40.0%
! CAATTTTGTGGGGTTGTGTT+AGG + chr5_4:43960290-43960309 None:intergenic 40.0%
! CCTCACAAGTCAATTTTGTG+GGG + chr5_4:43960300-43960319 None:intergenic 40.0%
! GTCCTCACAAGTCAATTTTG+TGG + chr5_4:43960302-43960321 None:intergenic 40.0%
GTGTGTTAAGAGTCCCAAAT+TGG + chr5_4:43960364-43960383 None:intergenic 40.0%
TGCTATTAGGTTTCCGCTAT+CGG + chr5_4:43960433-43960452 None:intergenic 40.0%
CAACCAGACTGTAGTATAAG+TGG - chr5_4:43960742-43960761 Msa0852730:intron 40.0%
AACTCGATCACAAAGATCAG+GGG + chr5_4:43960952-43960971 None:intergenic 40.0%
CAACTCGATCACAAAGATCA+GGG + chr5_4:43960953-43960972 None:intergenic 40.0%
TCAACTCGATCACAAAGATC+AGG + chr5_4:43960954-43960973 None:intergenic 40.0%
TCCTCAGCAAAAGGTAGATT+TGG - chr5_4:43961036-43961055 Msa0852730:intron 40.0%
! ACCAAATCTACCTTTTGCTG+AGG + chr5_4:43961040-43961059 None:intergenic 40.0%
! TTTAGGGTTCCACTTGCTAA+TGG - chr5_4:43961233-43961252 Msa0852730:intron 40.0%
TCTAATCATCGAGCAAACTG+AGG - chr5_4:43961262-43961281 Msa0852730:intron 40.0%
GCTTGATCATGATACTTCCA+AGG - chr5_4:43961322-43961341 Msa0852730:intron 40.0%
!!! ACGTACAAGCTGGTTTTGTA+AGG + chr5_4:43962072-43962091 None:intergenic 40.0%
AGAGTCGTATCTAACCAATG+TGG - chr5_4:43962125-43962144 Msa0852730:CDS 40.0%
GAGTCGTATCTAACCAATGT+GGG - chr5_4:43962126-43962145 Msa0852730:CDS 40.0%
! CGTCAATGTGCTGATCTATA+AGG - chr5_4:43962254-43962273 Msa0852730:CDS 40.0%
!! AGTTAAAGGGGCTTTGAAAG+TGG - chr5_4:43962335-43962354 Msa0852730:CDS 40.0%
!! GTTAAAGGGGCTTTGAAAGT+GGG - chr5_4:43962336-43962355 Msa0852730:CDS 40.0%
CTTTGCAAGTGTACGTTTGT+AGG - chr5_4:43962381-43962400 Msa0852730:CDS 40.0%
GAAGCATGGATAATACACAG+GGG + chr5_4:43962638-43962657 None:intergenic 40.0%
TATCCATGCTTCAAGCTTAG+AGG - chr5_4:43962646-43962665 Msa0852730:CDS 40.0%
ATCCATGCTTCAAGCTTAGA+GGG - chr5_4:43962647-43962666 Msa0852730:CDS 40.0%
TTCAAATCGTGATCCTACCT+AGG + chr5_4:43962791-43962810 None:intergenic 40.0%
GTCTCTGAATTGTCAAGACA+TGG - chr5_4:43963694-43963713 Msa0852730:CDS 40.0%
ATTGTCAAGACATGGACTCA+TGG - chr5_4:43963702-43963721 Msa0852730:CDS 40.0%
!! GGTATGTTTGTTGTTTGCTG+TGG - chr5_4:43963741-43963760 Msa0852730:CDS 40.0%
! AAGAAAAGCATAGAGGACGA+TGG + chr5_4:43964004-43964023 None:intergenic 40.0%
! GTGTCATTGTAGTGTGTTTG+AGG + chr5_4:43964028-43964047 None:intergenic 40.0%
TGGTCGAACCTGTCAAATAT+TGG + chr5_4:43964181-43964200 None:intergenic 40.0%
CTAACCATGAATGTCACACT+TGG + chr5_4:43964201-43964220 None:intergenic 40.0%
CAGGCAACAATGAACCATAA+GGG - chr5_4:43964598-43964617 Msa0852730:intron 40.0%
!! CCTCAGAATAAATTTTGGCC+AGG + chr5_4:43964644-43964663 None:intergenic 40.0%
CCTGGCCAAAATTTATTCTG+AGG - chr5_4:43964641-43964660 Msa0852730:CDS 40.0%
ATGTGTACGTACTTGACTTC+AGG - chr5_4:43964676-43964695 Msa0852730:CDS 40.0%
TGTGTACGTACTTGACTTCA+GGG - chr5_4:43964677-43964696 Msa0852730:CDS 40.0%
GGACCCCAAATTTAATTCTG+TGG + chr5_4:43964959-43964978 None:intergenic 40.0%
CACAACTTGTAGTGAGTAGT+TGG - chr5_4:43965148-43965167 Msa0852730:intron 40.0%
! CAATTCTTCAGGTTTCCAGA+GGG - chr5_4:43965349-43965368 Msa0852730:intron 40.0%
TTGAAATGGCAACTTGATGC+TGG + chr5_4:43965431-43965450 None:intergenic 40.0%
! GCATCAAGTTGCCATTTCAA+AGG - chr5_4:43965431-43965450 Msa0852730:intron 40.0%
!! TTTTGGTCTGCCCTTTGAAA+TGG + chr5_4:43965445-43965464 None:intergenic 40.0%
TCTCTCTTCTAAGCCATGTA+TGG + chr5_4:43965547-43965566 None:intergenic 40.0%
AGAGAGAAATAGTAGAGTCC+AGG - chr5_4:43965560-43965579 Msa0852730:intron 40.0%
GAGAGAAATAGTAGAGTCCA+GGG - chr5_4:43965561-43965580 Msa0852730:intron 40.0%
TAGAAATCGGCTGTTATAGG+CGG - chr5_4:43965635-43965654 Msa0852730:intron 40.0%
TTATGAGGTTTGGGTGGTAT+CGG + chr5_4:43965668-43965687 None:intergenic 40.0%
TACCACCCAAACCTCATAAA+AGG - chr5_4:43965669-43965688 Msa0852730:intron 40.0%
CTCTAGCAGTCATTAGGTAT+TGG - chr5_4:43965807-43965826 Msa0852730:five_prime_UTR 40.0%
TCTACAGCAATGATCATGGA+AGG - chr5_4:43965858-43965877 Msa0852730:five_prime_UTR 40.0%
! AGGATTGTTTTCCTGTCTGA+AGG - chr5_4:43965878-43965897 Msa0852730:five_prime_UTR 40.0%
GAGAAGATGATGTGGAGTGT+TGG - chr5_4:43955125-43955144 Msa0852730:three_prime_UTR 45.0%
! ACGAGGCACCCACAATATAA+CGG + chr5_4:43955226-43955245 None:intergenic 45.0%
GTGTGGGAAATGAAGAGGTT+TGG + chr5_4:43955277-43955296 None:intergenic 45.0%
! AGCGCAAAGAGAAAGAGTGT+GGG + chr5_4:43955293-43955312 None:intergenic 45.0%
GTGTGAAAAAGTGATGAGGG+TGG + chr5_4:43955411-43955430 None:intergenic 45.0%
GGTAGTAAGGGTTTGTAGTG+TGG - chr5_4:43955748-43955767 Msa0852730:CDS 45.0%
TGGTACAATTGTGTTCTCGG+TGG + chr5_4:43956152-43956171 None:intergenic 45.0%
TTCCATCATGTACCGCTACA+CGG - chr5_4:43956436-43956455 Msa0852730:CDS 45.0%
!! TCTGGCCTGCCTTATTTATC+AGG - chr5_4:43957317-43957336 Msa0852730:intron 45.0%
CTTGCACAGATCATCAACAC+TGG + chr5_4:43957354-43957373 None:intergenic 45.0%
GGTCATCTCCTGTACATAAC+TGG - chr5_4:43957407-43957426 Msa0852730:CDS 45.0%
GGCTGTACTAATGTCTCCTA+CGG - chr5_4:43957466-43957485 Msa0852730:CDS 45.0%
CAAGCCAAAAGCAATCTGCA+AGG + chr5_4:43957968-43957987 None:intergenic 45.0%
GAAAGAGAAAATGCTGGTCC+AGG + chr5_4:43958054-43958073 None:intergenic 45.0%
AGATACGTTTCCTCAGTGCA+GGG + chr5_4:43958171-43958190 None:intergenic 45.0%
AAGATACGTTTCCTCAGTGC+AGG + chr5_4:43958172-43958191 None:intergenic 45.0%
GTGGTTTGACAGATGAACGA+AGG - chr5_4:43958291-43958310 Msa0852730:intron 45.0%
AAATGAGTGTCTCGGTCTTC+AGG + chr5_4:43958343-43958362 None:intergenic 45.0%
! GAAGACCGAGACACTCATTT+TGG - chr5_4:43958343-43958362 Msa0852730:intron 45.0%
TGAGAATTACCAGCCTGTTG+AGG - chr5_4:43958442-43958461 Msa0852730:intron 45.0%
TGCAGTGAATGGAGTAACCA+GGG + chr5_4:43958470-43958489 None:intergenic 45.0%
ATGCAGTGAATGGAGTAACC+AGG + chr5_4:43958471-43958490 None:intergenic 45.0%
ACTGCATTCGGTTATCTCTG+AGG - chr5_4:43958484-43958503 Msa0852730:intron 45.0%
! GCAAAGAATTGCAGTACTGG+AGG - chr5_4:43958664-43958683 Msa0852730:intron 45.0%
! AAGCTTGTTCCTTCTATGGG+AGG - chr5_4:43958767-43958786 Msa0852730:intron 45.0%
GGAGGAGCTCTTGTTGATAT+TGG - chr5_4:43958785-43958804 Msa0852730:intron 45.0%
TTTGTCCTTCGACGAAATGG+GGG + chr5_4:43958866-43958885 None:intergenic 45.0%
CTTTGTCCTTCGACGAAATG+GGG + chr5_4:43958867-43958886 None:intergenic 45.0%
TAAAGAGGGTCTTGGTACGA+AGG - chr5_4:43959285-43959304 Msa0852730:intron 45.0%
AAAGAGGGTCTTGGTACGAA+GGG - chr5_4:43959286-43959305 Msa0852730:intron 45.0%
TCCAACTTTACGCAAGTTGC+AGG + chr5_4:43959371-43959390 None:intergenic 45.0%
! CTCGGCACCAGAAATCTTTT+TGG + chr5_4:43959502-43959521 None:intergenic 45.0%
ACCTGCAGCAACAGTTCTTA+CGG + chr5_4:43959580-43959599 None:intergenic 45.0%
! TGCTGCAGGTCATTCTTTTG+AGG - chr5_4:43959590-43959609 Msa0852730:intron 45.0%
TGAGGAACTGCAGAAAGACT+TGG - chr5_4:43959608-43959627 Msa0852730:intron 45.0%
GAACTGCAGAAAGACTTGGA+AGG - chr5_4:43959612-43959631 Msa0852730:intron 45.0%
! TGGAAGGTTTGCTTTCGACT+TGG - chr5_4:43959628-43959647 Msa0852730:intron 45.0%
TGCTCTTGCTGCTGATGAAA+GGG - chr5_4:43959680-43959699 Msa0852730:intron 45.0%
!!! CTGTTCCTGCTATTTTGCAC+AGG - chr5_4:43959712-43959731 Msa0852730:intron 45.0%
ATTGCCCTGTGCAAAATAGC+AGG + chr5_4:43959720-43959739 None:intergenic 45.0%
!!! TGCTATTTTGCACAGGGCAA+TGG - chr5_4:43959719-43959738 Msa0852730:intron 45.0%
!! GCTATTTTGCACAGGGCAAT+GGG - chr5_4:43959720-43959739 Msa0852730:intron 45.0%
AATGGGTCAAACTCTCTCAG+TGG - chr5_4:43959737-43959756 Msa0852730:intron 45.0%
TCTGATAGCCTGTCACACAT+CGG - chr5_4:43960120-43960139 Msa0852730:intron 45.0%
!! CCCCACAAAATTGACTTGTG+AGG - chr5_4:43960297-43960316 Msa0852730:intron 45.0%
GCTATTAGGTTTCCGCTATC+GGG + chr5_4:43960432-43960451 None:intergenic 45.0%
AGCGGAAACCTAATAGCATG+TGG - chr5_4:43960435-43960454 Msa0852730:intron 45.0%
ACCTAATAGCATGTGGTCCA+TGG - chr5_4:43960442-43960461 Msa0852730:intron 45.0%
TCCATGGACCACATGCTATT+AGG + chr5_4:43960446-43960465 None:intergenic 45.0%
GTGGTCCATGGATCTTGAAT+AGG - chr5_4:43960454-43960473 Msa0852730:intron 45.0%
CAGAGCCTATTCAAGATCCA+TGG + chr5_4:43960462-43960481 None:intergenic 45.0%
TCATGATCAGTAGGTCTCAC+CGG + chr5_4:43960620-43960639 None:intergenic 45.0%
AAAACCGGATCAACCAACTG+TGG - chr5_4:43960717-43960736 Msa0852730:intron 45.0%
TGAACCACAGTTGGTTGATC+CGG + chr5_4:43960724-43960743 None:intergenic 45.0%
GTCCCACTTATACTACAGTC+TGG + chr5_4:43960748-43960767 None:intergenic 45.0%
AGTGGGACCAACCAAAAAAC+TGG - chr5_4:43960760-43960779 Msa0852730:intron 45.0%
TCAGGTGACCAATTACCTTC+AGG - chr5_4:43960920-43960939 Msa0852730:intron 45.0%
GGCAATGTCCTGAAGGTAAT+TGG + chr5_4:43960931-43960950 None:intergenic 45.0%
AGAGAACCTCCATTAGCAAG+TGG + chr5_4:43961245-43961264 None:intergenic 45.0%
CAATCTTGCAGCTGCAAAAC+AGG - chr5_4:43961364-43961383 Msa0852730:CDS 45.0%
!!! TTGCCTCGTTTTGGCTTTGA+GGG + chr5_4:43962164-43962183 None:intergenic 45.0%
TGCAATTAGGCGACTAAGTG+AGG - chr5_4:43962193-43962212 Msa0852730:CDS 45.0%
TGCAAAGCCCCTTTCCTAAT+GGG + chr5_4:43962368-43962387 None:intergenic 45.0%
TTGCAAAGCCCCTTTCCTAA+TGG + chr5_4:43962369-43962388 None:intergenic 45.0%
TCTTGGGTCTCACTCACAAA+AGG - chr5_4:43962424-43962443 Msa0852730:CDS 45.0%
AACCCTCTAAGCTTGAAGCA+TGG + chr5_4:43962652-43962671 None:intergenic 45.0%
CTTAGAGGGTTCTTGCATGT+GGG - chr5_4:43962661-43962680 Msa0852730:CDS 45.0%
TTAGAGGGTTCTTGCATGTG+GGG - chr5_4:43962662-43962681 Msa0852730:CDS 45.0%
! TCATCTGTTGAGCTAGCTTC+TGG - chr5_4:43962880-43962899 Msa0852730:intron 45.0%
! CATCTGTTGAGCTAGCTTCT+GGG - chr5_4:43962881-43962900 Msa0852730:intron 45.0%
! TTCTGGGTTGAGTTAGGTCT+AGG - chr5_4:43962897-43962916 Msa0852730:intron 45.0%
GAGTTGCGACTACGAGATAT+TGG - chr5_4:43963074-43963093 Msa0852730:CDS 45.0%
TTGCGACTACGAGATATTGG+TGG - chr5_4:43963077-43963096 Msa0852730:CDS 45.0%
! AGATATTGGTGGCATCATCG+TGG - chr5_4:43963088-43963107 Msa0852730:CDS 45.0%
CAGTCCCTACCTTGTCATTA+AGG + chr5_4:43963395-43963414 None:intergenic 45.0%
AGGGATGTACCATTTCAGCT+TGG + chr5_4:43963535-43963554 None:intergenic 45.0%
CACAGATCTGTCTCTCTCAA+TGG + chr5_4:43963668-43963687 None:intergenic 45.0%
CATTGAGAGAGACAGATCTG+TGG - chr5_4:43963666-43963685 Msa0852730:CDS 45.0%
TCGACCAAGTGTGACATTCA+TGG - chr5_4:43964194-43964213 Msa0852730:intron 45.0%
CCTTATGGTTCATTGTTGCC+TGG + chr5_4:43964600-43964619 None:intergenic 45.0%
CCAGGCAACAATGAACCATA+AGG - chr5_4:43964597-43964616 Msa0852730:intron 45.0%
!!! GCTTTTGAGGTTCTCCCTTA+TGG + chr5_4:43964615-43964634 None:intergenic 45.0%
AACCTCAAAAGCCTAAGTCC+TGG - chr5_4:43964623-43964642 Msa0852730:CDS 45.0%
TGAGCAGTTCTCTCAAAGTC+TGG - chr5_4:43964722-43964741 Msa0852730:intron 45.0%
! CCTCTGGAAACCTGAAGAAT+TGG + chr5_4:43965351-43965370 None:intergenic 45.0%
! CCAATTCTTCAGGTTTCCAG+AGG - chr5_4:43965348-43965367 Msa0852730:intron 45.0%
! CCATGCACTGATGACAAAGT+CGG - chr5_4:43965399-43965418 Msa0852730:intron 45.0%
AGAAATAGTAGAGTCCAGGG+TGG - chr5_4:43965564-43965583 Msa0852730:intron 45.0%
! CTCCTTTTATGAGGTTTGGG+TGG + chr5_4:43965674-43965693 None:intergenic 45.0%
GGTGTACTCTAGCAGTCATT+AGG - chr5_4:43965801-43965820 Msa0852730:five_prime_UTR 45.0%
!!! TTTTTAATTTTTTAATTTAG+AGG - chr5_4:43955584-43955603 Msa0852730:three_prime_UTR 5.0%
!!! TTTTAATTTTTTAATTTAGA+GGG - chr5_4:43955585-43955604 Msa0852730:three_prime_UTR 5.0%
!!! AATATTTTTATTTAATTTTC+AGG - chr5_4:43960902-43960921 Msa0852730:intron 5.0%
!!! ATAATAGAATTTTTTTTTAT+AGG - chr5_4:43962710-43962729 Msa0852730:CDS 5.0%
CAGCGCAAAGAGAAAGAGTG+TGG + chr5_4:43955294-43955313 None:intergenic 50.0%
! ACTCTCGAGTTGCTGAGTTC+CGG + chr5_4:43956770-43956789 None:intergenic 50.0%
TGCGGAACACTAACGCCAAA+AGG + chr5_4:43957250-43957269 None:intergenic 50.0%
GCACAGATCATCAACACTGG+TGG + chr5_4:43957351-43957370 None:intergenic 50.0%
CAGTGTTGCGGATTTCCTTC+TGG + chr5_4:43957771-43957790 None:intergenic 50.0%
GATACGTTTCCTCAGTGCAG+GGG + chr5_4:43958170-43958189 None:intergenic 50.0%
AGTAACCAGGGTTCCTCAAC+AGG + chr5_4:43958458-43958477 None:intergenic 50.0%
ACAAGAGCTCCTCCCATAGA+AGG + chr5_4:43958779-43958798 None:intergenic 50.0%
TATTCCCCCCATTTCGTCGA+AGG - chr5_4:43958858-43958877 Msa0852730:intron 50.0%
TTGTCCTTCGACGAAATGGG+GGG + chr5_4:43958865-43958884 None:intergenic 50.0%
! TCTCGTGCTACTGACATTCC+TGG - chr5_4:43958926-43958945 Msa0852730:intron 50.0%
TGTATGTCGGGTATTCCACC+AGG + chr5_4:43958947-43958966 None:intergenic 50.0%
GCCTGCAACTTGCGTAAAGT+TGG - chr5_4:43959367-43959386 Msa0852730:intron 50.0%
AGCAAAGACATTGCAGCCAG+AGG - chr5_4:43959542-43959561 Msa0852730:intron 50.0%
GCAAAGACATTGCAGCCAGA+GGG - chr5_4:43959543-43959562 Msa0852730:intron 50.0%
! ACATTGCAGCCAGAGGGTTT+TGG - chr5_4:43959549-43959568 Msa0852730:intron 50.0%
CAGCAACAGTTCTTACGGTG+AGG + chr5_4:43959575-43959594 None:intergenic 50.0%
ACCGTAAGAACTGTTGCTGC+AGG - chr5_4:43959576-43959595 Msa0852730:intron 50.0%
CTGCTCTTGCTGCTGATGAA+AGG - chr5_4:43959679-43959698 Msa0852730:intron 50.0%
TCTTGCTGCTGATGAAAGGG+TGG - chr5_4:43959683-43959702 Msa0852730:intron 50.0%
CTCCCCAAGGACATTTCATG+AGG - chr5_4:43959934-43959953 Msa0852730:intron 50.0%
TGACAGGCTATCAGACAGTC+GGG + chr5_4:43960115-43960134 None:intergenic 50.0%
GTGACAGGCTATCAGACAGT+CGG + chr5_4:43960116-43960135 None:intergenic 50.0%
GTGGTAAACCGATGTGTGAC+AGG + chr5_4:43960131-43960150 None:intergenic 50.0%
!! AAGATTCTGCAGGCTTTGGG+TGG + chr5_4:43960170-43960189 None:intergenic 50.0%
!! ATGTCCAGTTCTGGGTGTGA+GGG + chr5_4:43960389-43960408 None:intergenic 50.0%
CACTCCAGATGTCCAGTTCT+GGG + chr5_4:43960397-43960416 None:intergenic 50.0%
ACACTCCAGATGTCCAGTTC+TGG + chr5_4:43960398-43960417 None:intergenic 50.0%
AATCGGACCGGAGATTGAAC+CGG - chr5_4:43960598-43960617 Msa0852730:intron 50.0%
CAGTCTGGTTGAACCACAGT+TGG + chr5_4:43960733-43960752 None:intergenic 50.0%
GGACCAACCAAAAAACTGGC+TGG - chr5_4:43960764-43960783 Msa0852730:intron 50.0%
!!! GAGCCAGCCAGTTTTTTGGT+TGG + chr5_4:43960770-43960789 None:intergenic 50.0%
! AGGGTTCCACTTGCTAATGG+AGG - chr5_4:43961236-43961255 Msa0852730:intron 50.0%
CTTGCAGCTGCAAAACAGGT+TGG - chr5_4:43961368-43961387 Msa0852730:CDS 50.0%
GCACTTCTCAACGTACAAGC+TGG + chr5_4:43962082-43962101 None:intergenic 50.0%
! GGGTGGATTTAGTCCCACAT+TGG + chr5_4:43962142-43962161 None:intergenic 50.0%
!!! TGCCTCGTTTTGGCTTTGAG+GGG + chr5_4:43962163-43962182 None:intergenic 50.0%
!!! GTTGCCTCGTTTTGGCTTTG+AGG + chr5_4:43962165-43962184 None:intergenic 50.0%
AAAGTGGGACCCATCCCATT+AGG - chr5_4:43962351-43962370 Msa0852730:CDS 50.0%
GGACCCATCCCATTAGGAAA+GGG - chr5_4:43962357-43962376 Msa0852730:CDS 50.0%
GACCCATCCCATTAGGAAAG+GGG - chr5_4:43962358-43962377 Msa0852730:CDS 50.0%
AGCCCCTTTCCTAATGGGAT+GGG + chr5_4:43962363-43962382 None:intergenic 50.0%
AAGCCCCTTTCCTAATGGGA+TGG + chr5_4:43962364-43962383 None:intergenic 50.0%
GCTTAGAGGGTTCTTGCATG+TGG - chr5_4:43962660-43962679 Msa0852730:CDS 50.0%
TAGAGGGTTCTTGCATGTGG+GGG - chr5_4:43962663-43962682 Msa0852730:CDS 50.0%
TGAGACTCCTTACCAGTCCT+AGG - chr5_4:43962771-43962790 Msa0852730:CDS 50.0%
ACTCCTTACCAGTCCTAGGT+AGG - chr5_4:43962775-43962794 Msa0852730:CDS 50.0%
! GATCCTACCTAGGACTGGTA+AGG + chr5_4:43962781-43962800 None:intergenic 50.0%
ATCGTGATCCTACCTAGGAC+TGG + chr5_4:43962786-43962805 None:intergenic 50.0%
! GCTAGCTTCTGGGTTGAGTT+AGG - chr5_4:43962891-43962910 Msa0852730:intron 50.0%
ACTGGGAAGGGCTTCTACAA+AGG - chr5_4:43963228-43963247 Msa0852730:intron 50.0%
GAGAGACAGATCTGTGGTGA+AGG - chr5_4:43963672-43963691 Msa0852730:CDS 50.0%
TAAAGCTTCAACCCTGCCTG+TGG + chr5_4:43964247-43964266 None:intergenic 50.0%
CCGACTTTGTCATCAGTGCA+TGG + chr5_4:43965402-43965421 None:intergenic 50.0%
GCATGAGGAGAACCAACCTT+AGG - chr5_4:43965952-43965971 Msa0852730:five_prime_UTR 50.0%
!! ATGGATTGGCAGCCTAAGGT+TGG + chr5_4:43965967-43965986 None:intergenic 50.0%
ACCTTAGGCTGCCAATCCAT+TGG - chr5_4:43965967-43965986 Msa0852730:five_prime_UTR 50.0%
ATAGGAGGTGGTGACACACG+AGG + chr5_4:43955243-43955262 None:intergenic 55.0%
TAAGTGAACGCGGCGCACTA+GGG + chr5_4:43955863-43955882 None:intergenic 55.0%
CTCCGTGTAGCGGTACATGA+TGG + chr5_4:43956441-43956460 None:intergenic 55.0%
CAGGGTCCCCAGTTATGTAC+AGG + chr5_4:43957418-43957437 None:intergenic 55.0%
TCCAGCAGCCTAACACAGCA+GGG + chr5_4:43957436-43957455 None:intergenic 55.0%
TTCCAGCAGCCTAACACAGC+AGG + chr5_4:43957437-43957456 None:intergenic 55.0%
AGGCTGCTGGAAACCCAACA+TGG - chr5_4:43957445-43957464 Msa0852730:CDS 55.0%
! CGTGCTACTGACATTCCTGG+TGG - chr5_4:43958929-43958948 Msa0852730:intron 55.0%
! TTTCTGGTGCCGAGTGCACA+AGG - chr5_4:43959508-43959527 Msa0852730:intron 55.0%
GCTGCTGATGAAAGGGTGGA+AGG - chr5_4:43959687-43959706 Msa0852730:intron 55.0%
! AAATGGTGGTCGACTCCCCA+AGG - chr5_4:43959921-43959940 Msa0852730:intron 55.0%
!! TGTCCAGTTCTGGGTGTGAG+GGG + chr5_4:43960388-43960407 None:intergenic 55.0%
!! GATGTCCAGTTCTGGGTGTG+AGG + chr5_4:43960390-43960409 None:intergenic 55.0%
CACACCCAGAACTGGACATC+TGG - chr5_4:43960390-43960409 Msa0852730:intron 55.0%
! CATCTGGAGTGTGACCTGAG+TGG - chr5_4:43960406-43960425 Msa0852730:intron 55.0%
!! CGGTTTTGTGGGGCTGTGTT+GGG + chr5_4:43960512-43960531 None:intergenic 55.0%
CCAACACAGCCCCACAAAAC+CGG - chr5_4:43960510-43960529 Msa0852730:intron 55.0%
!! ACCCCACAAGCCGGTTTTGT+GGG + chr5_4:43960523-43960542 None:intergenic 55.0%
!! GGTCTCACCGGTTCAATCTC+CGG + chr5_4:43960608-43960627 None:intergenic 55.0%
!!! CCAGGAGCCAGCCAGTTTTT+TGG + chr5_4:43960774-43960793 None:intergenic 55.0%
! CCAAAAAACTGGCTGGCTCC+TGG - chr5_4:43960771-43960790 Msa0852730:intron 55.0%
GATCAGGGGCAATGTCCTGA+AGG + chr5_4:43960938-43960957 None:intergenic 55.0%
!!! TCGTTTTGGCTTTGAGGGGG+TGG + chr5_4:43962159-43962178 None:intergenic 55.0%
ACCCCCTCAAAGCCAAAACG+AGG - chr5_4:43962158-43962177 Msa0852730:CDS 55.0%
!!! GCCTCGTTTTGGCTTTGAGG+GGG + chr5_4:43962162-43962181 None:intergenic 55.0%
GGGACCCATCCCATTAGGAA+AGG - chr5_4:43962356-43962375 Msa0852730:CDS 55.0%
GTGGCATGGCAACAGTCACA+TGG + chr5_4:43964228-43964247 None:intergenic 55.0%
TGTGACTGTTGCCATGCCAC+AGG - chr5_4:43964228-43964247 Msa0852730:intron 55.0%
! GGCCAGGACTTAGGCTTTTG+AGG + chr5_4:43964628-43964647 None:intergenic 55.0%
GTTTCCAGAGGGTTCACCAG+AGG - chr5_4:43965360-43965379 Msa0852730:intron 55.0%
AGTTCCTCTGGTGAACCCTC+TGG + chr5_4:43965367-43965386 None:intergenic 55.0%
GTAGAGTCCAGGGTGGAAGT+TGG - chr5_4:43965571-43965590 Msa0852730:intron 55.0%
TGCTCTTCCAACTTCCACCC+TGG + chr5_4:43965581-43965600 None:intergenic 55.0%
!! GCCAATGGATTGGCAGCCTA+AGG + chr5_4:43965971-43965990 None:intergenic 55.0%
CTAAGTGAACGCGGCGCACT+AGG + chr5_4:43955864-43955883 None:intergenic 60.0%
ACTGGGGACCCTGCTGTGTT+AGG - chr5_4:43957425-43957444 Msa0852730:CDS 60.0%
ACCCTGCTGTGTTAGGCTGC+TGG - chr5_4:43957432-43957451 Msa0852730:CDS 60.0%
TGCATGGAACCCCTGCACTG+AGG - chr5_4:43958158-43958177 Msa0852730:intron 60.0%
ACCAGCCTGTTGAGGAACCC+TGG - chr5_4:43958450-43958469 Msa0852730:intron 60.0%
ACCAGGGTTCCTCAACAGGC+TGG + chr5_4:43958454-43958473 None:intergenic 60.0%
ACGGTGAGGCCAAAACCCTC+TGG + chr5_4:43959561-43959580 None:intergenic 60.0%
ACACCCCTCACACCCAGAAC+TGG - chr5_4:43960382-43960401 Msa0852730:intron 60.0%
TGACCTGAGTGGCCCGATAG+CGG - chr5_4:43960417-43960436 Msa0852730:intron 60.0%
TTTCCGCTATCGGGCCACTC+AGG + chr5_4:43960423-43960442 None:intergenic 60.0%
!! CCGGTTTTGTGGGGCTGTGT+TGG + chr5_4:43960513-43960532 None:intergenic 60.0%
!! AGCCCCACAAAACCGGCTTG+TGG - chr5_4:43960517-43960536 Msa0852730:intron 60.0%
!! GCCCCACAAAACCGGCTTGT+GGG - chr5_4:43960518-43960537 Msa0852730:intron 60.0%
!! CCCCACAAGCCGGTTTTGTG+GGG + chr5_4:43960522-43960541 None:intergenic 60.0%
!! CCCCACAAAACCGGCTTGTG+GGG - chr5_4:43960519-43960538 Msa0852730:intron 60.0%
!! CACCCCACAAGCCGGTTTTG+TGG + chr5_4:43960524-43960543 None:intergenic 60.0%
!! CAAAACCGGCTTGTGGGGTG+AGG - chr5_4:43960524-43960543 Msa0852730:intron 60.0%
ACTGTTGCCATGCCACAGGC+AGG - chr5_4:43964232-43964251 Msa0852730:intron 60.0%
CTGTTGCCATGCCACAGGCA+GGG - chr5_4:43964233-43964252 Msa0852730:intron 60.0%
CTTCAACCCTGCCTGTGGCA+TGG + chr5_4:43964242-43964261 None:intergenic 60.0%
GCAGTCCTCACCCCACAAGC+CGG + chr5_4:43960532-43960551 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 43955045 43966101 43955045 ID=Msa0852730;Name=Msa0852730
chr5_4 mRNA 43955045 43966101 43955045 ID=Msa0852730-mRNA-1;Parent=Msa0852730;Name=Msa0852730-mRNA-1;_AED=0.22;_eAED=0.22;_QI=325|0.75|0.76|1|0.83|0.76|13|598|930
chr5_4 exon 43955045 43955786 43955045 ID=Msa0852730-mRNA-1:exon:13920;Parent=Msa0852730-mRNA-1
chr5_4 exon 43956390 43956545 43956390 ID=Msa0852730-mRNA-1:exon:13919;Parent=Msa0852730-mRNA-1
chr5_4 exon 43956835 43956954 43956835 ID=Msa0852730-mRNA-1:exon:13918;Parent=Msa0852730-mRNA-1
chr5_4 exon 43957405 43957517 43957405 ID=Msa0852730-mRNA-1:exon:13917;Parent=Msa0852730-mRNA-1
chr5_4 exon 43958009 43958081 43958009 ID=Msa0852730-mRNA-1:exon:13916;Parent=Msa0852730-mRNA-1
chr5_4 exon 43959761 43959908 43959761 ID=Msa0852730-mRNA-1:exon:13915;Parent=Msa0852730-mRNA-1
chr5_4 exon 43961191 43961251 43961191 ID=Msa0852730-mRNA-1:exon:13914;Parent=Msa0852730-mRNA-1
chr5_4 exon 43961360 43961681 43961360 ID=Msa0852730-mRNA-1:exon:13913;Parent=Msa0852730-mRNA-1
chr5_4 exon 43961795 43962854 43961795 ID=Msa0852730-mRNA-1:exon:13912;Parent=Msa0852730-mRNA-1
chr5_4 exon 43962962 43963173 43962962 ID=Msa0852730-mRNA-1:exon:13911;Parent=Msa0852730-mRNA-1
chr5_4 exon 43963626 43963807 43963626 ID=Msa0852730-mRNA-1:exon:13910;Parent=Msa0852730-mRNA-1
chr5_4 exon 43964611 43964717 43964611 ID=Msa0852730-mRNA-1:exon:13909;Parent=Msa0852730-mRNA-1
chr5_4 exon 43965682 43966101 43965682 ID=Msa0852730-mRNA-1:exon:13908;Parent=Msa0852730-mRNA-1
chr5_4 five_prime_UTR 43965777 43966101 43965777 ID=Msa0852730-mRNA-1:five_prime_utr;Parent=Msa0852730-mRNA-1
chr5_4 CDS 43965682 43965776 43965682 ID=Msa0852730-mRNA-1:cds;Parent=Msa0852730-mRNA-1
chr5_4 CDS 43964611 43964717 43964611 ID=Msa0852730-mRNA-1:cds;Parent=Msa0852730-mRNA-1
chr5_4 CDS 43963626 43963807 43963626 ID=Msa0852730-mRNA-1:cds;Parent=Msa0852730-mRNA-1
chr5_4 CDS 43962962 43963173 43962962 ID=Msa0852730-mRNA-1:cds;Parent=Msa0852730-mRNA-1
chr5_4 CDS 43961795 43962854 43961795 ID=Msa0852730-mRNA-1:cds;Parent=Msa0852730-mRNA-1
chr5_4 CDS 43961360 43961681 43961360 ID=Msa0852730-mRNA-1:cds;Parent=Msa0852730-mRNA-1
chr5_4 CDS 43961191 43961251 43961191 ID=Msa0852730-mRNA-1:cds;Parent=Msa0852730-mRNA-1
chr5_4 CDS 43959761 43959908 43959761 ID=Msa0852730-mRNA-1:cds;Parent=Msa0852730-mRNA-1
chr5_4 CDS 43958009 43958081 43958009 ID=Msa0852730-mRNA-1:cds;Parent=Msa0852730-mRNA-1
chr5_4 CDS 43957405 43957517 43957405 ID=Msa0852730-mRNA-1:cds;Parent=Msa0852730-mRNA-1
chr5_4 CDS 43956835 43956954 43956835 ID=Msa0852730-mRNA-1:cds;Parent=Msa0852730-mRNA-1
chr5_4 CDS 43956390 43956545 43956390 ID=Msa0852730-mRNA-1:cds;Parent=Msa0852730-mRNA-1
chr5_4 CDS 43955643 43955786 43955643 ID=Msa0852730-mRNA-1:cds;Parent=Msa0852730-mRNA-1
chr5_4 three_prime_UTR 43955045 43955642 43955045 ID=Msa0852730-mRNA-1:three_prime_utr;Parent=Msa0852730-mRNA-1
Gene Sequence

>Msa0852730

ATGTTAATGGAGTTTATTGCTGAAGTTGGTTTTTTGCACCACCCTCATCACTTTTTCACACCCTTCTCTAATCCTTACACACTTTCACCAAAGAGGCATATATTCCATCATGTACCGCTACACGGAGAATATAGATTCATGTGCTGTCTGAAGAACCATAAATCAGTTAGAAGATTAGCTTCATTCACAACAACGCAGAAAGGAAATTCAACCACCAGTGTTGATGATCTGTGCAAGATTGTTTGGACTGTAGAAGCTGATTTAGAAGATGGTCATCTCCTGTACATAACTGGGGACCCTGCTGTGTTAGGCTGCTGGAAACCCAACATGGCTGTACTAATGTCTCCTACGGAGCACACTAATATTTGGAAAGCTGAATCTCAGATTGCTTTTGGCTTGAACTTTAAATATAACTATTTCATTAAGGAAAAATCAAGGTCCTCAAGTGACATTATTTGGAAGCCTGGACCAGCATTTTCTCTTTCAGTACCTCTGACAGTTCTAGAAGATAATGAAATTGTGGTGAGGGATTTATGGATTAGGTCCAATTTCCATACTTCTTCAGCTCATGCATGGAACCCCTGCACTGAGGAAACTGGTTTGACAGATGAACGAAGGAATATGAGTCTCCTTGAAAATGATTTCCTGAAGACCGAGACACTCATTTTGGAAGATCAATTATTTTTTGACAGTGAGGACATGGCGATTTTGAGTAATAAGGATTCACATCCTATTAACGTTCTTTCTGAGAATTACCAGCCTGTTGAGGAACCCTGGTTACTCCATTCACTGCATTCGGTTATCTCTGAGGATAAAACAGAATCAAATGAATCTAAAACTAATGACATTGTGAAAGAACAGGTGAAGTTGGTAGATTCAGAAGAGTTGTTACCTGAAGAGAGCAGTAATACAATTTTAAAAGACCCTGTTTCCACCATTATACTTATAAACTCATCCATATGTACCATGCAAAGAATTGCAGTACTGGAGGATGAAAAACTGGTTGAATTATTATTGGAACCAGTGAAGACTAATGTGCAAAGCGATAGTGTATATGTGGGGGAAATCACAAAGCTTGTTCCTTCTATGGGAGGAGCTCTTGTTGATATTGGGAATTCTAGACCCTCTCTTATGGACATTAAGCCATACAAGGAACCATTTATATTCCCCCCATTTCGTCGAAGGACAAAGAAACAAGAAATTGATCTTAAGGGAAAAAATGATCACATGTCTCGTGCTACTGACATTCCTGGTGGAATACCCGACATACATTCTGAGGATGATTGTTTGAAATCTGTACACAATGACTATGATGAACATGAAGCAGATGATGATTTTTGTCTTTCAGAAGTTCTTAAGGAAAATGTGAATGGTAGTGTGGTTGATGATGAAGTAGAAGCTGACTTTGAGGATGATGTTGAGGGAGCTGATGTTCATATAGAAGGAAAAATGAATAACGGTTCTCTTTCTTTAGGCATGAATGGGTCTATCAATTCTCATATTCTGCCAACAAAAGATACAAAGAGAGAAATGGGAGAAAATAAATGGATCCAAGTTCGTAACGGAACCAAAATAGTTGTCCAAGTTGTTAAAGAGGGTCTTGGTACGAAGGGTCCCACTCTGACTGCTTTTCCTAAACTAAGAAGTAGATTCTGGGTTTTGACTACACGTTGTGATAAAATTGGAGTCTCCAAAAAGATTTCTGGTGCCGAGTGCACAAGGTTGAAAGTTATAGCAAAGACATTGCAGCCAGAGGGTTTTGGCCTCACCGTAAGAACTGTTGCTGCAGGTCATTCTTTTGAGGAACTGCAGAAAGACTTGGAAGGTTTGCTTTCGACTTGGAAAAACATAATGGAAAATGCAAAGTCTTCTGCTCTTGCTGCTGATGAAAGGGTGGAAGGAGCTGTTCCTGCTATTTTGCACAGGGCAATGGGTCAAACTCTCTCAGTGGTCCAAGATTATTTCAATGAAAATGTTGTTTATATGATATGCTTCAGGTTAAGAAAATGGTGGTCGACTCCCCAAGGACATTTCATGAGGGTTCCACTTGCTAATGGAGGTTCTCTAATCATCGAGCAAACTGAGGCGTTAGTTTCTATTGATGTAAATGGAGGACATGGGATGCTTGATCATGATACTTCCAAGGAGAAAGCTATTCTAGATGTCAATCTTGCAGCTGCAAAACAGATTGCAAGGGAGTTGCGACTACGAGATATTGGTGGCATCATCGTGGTTGATTTCATTGATATGACAGATGAAGCAAATAAAAGATTGGTCTATGAAGAAGTCAAGAAAGCCATTGAGAGAGACAGATCTGTGGTGAAGGTCTCTGAATTGTCAAGACATGGACTCATGGAAATAACACGAAAGAGGGTTCGACCAAGTGTGACATTCATGGTTAGTGAACCATGTGACTGTTGCCATGCCACAGGCAGGGTTGAAGCTTTAGAGACTTCCTTCTTCAAAATTGAACAGCAAATTTGTCGTATTCTTGCAACAATGAACCATAAGGGAGAACCTCAAAAGCCTAAGTCCTGGCCAAAATTTATTCTGAGGGTTGACCATCATATGTGTACGTACTTGACTTCAGGGAAAAAGACAAAACTTGGAATATTGAGCAGTTCTCTCAAAGTCTGGATTCACTTAAAGGTTTCCAGAGGGTTCACCAGAGGAACTTTTGAGATCAAACCATGCACTGATGACAAAGTCGGTAGAAACCAGCATCAAGTTGCCATTTCAAAGGGCAGACCAAAATCTACTCTTGTTCGAGTGATAAAATCAAAAGCTAGGTGA
Protein sequence

>Msa0852730

MLMEFIAEVGFLHHPHHFFTPFSNPYTLSPKRHIFHHVPLHGEYRFMCCLKNHKSVRRLASFTTTQKGNSTTSVDDLCKIVWTVEADLEDGHLLYITGDPAVLGCWKPNMAVLMSPTEHTNIWKAESQIAFGLNFKYNYFIKEKSRSSSDIIWKPGPAFSLSVPLTVLEDNEIVVRDLWIRSNFHTSSAHAWNPCTEETGLTDERRNMSLLENDFLKTETLILEDQLFFDSEDMAILSNKDSHPINVLSENYQPVEEPWLLHSLHSVISEDKTESNESKTNDIVKEQVKLVDSEELLPEESSNTILKDPVSTIILINSSICTMQRIAVLEDEKLVELLLEPVKTNVQSDSVYVGEITKLVPSMGGALVDIGNSRPSLMDIKPYKEPFIFPPFRRRTKKQEIDLKGKNDHMSRATDIPGGIPDIHSEDDCLKSVHNDYDEHEADDDFCLSEVLKENVNGSVVDDEVEADFEDDVEGADVHIEGKMNNGSLSLGMNGSINSHILPTKDTKREMGENKWIQVRNGTKIVVQVVKEGLGTKGPTLTAFPKLRSRFWVLTTRCDKIGVSKKISGAECTRLKVIAKTLQPEGFGLTVRTVAAGHSFEELQKDLEGLLSTWKNIMENAKSSALAADERVEGAVPAILHRAMGQTLSVVQDYFNENVVYMICFRLRKWWSTPQGHFMRVPLANGGSLIIEQTEALVSIDVNGGHGMLDHDTSKEKAILDVNLAAAKQIARELRLRDIGGIIVVDFIDMTDEANKRLVYEEVKKAIERDRSVVKVSELSRHGLMEITRKRVRPSVTFMVSEPCDCCHATGRVEALETSFFKIEQQICRILATMNHKGEPQKPKSWPKFILRVDHHMCTYLTSGKKTKLGILSSSLKVWIHLKVSRGFTRGTFEIKPCTDDKVGRNQHQVAISKGRPKSTLVRVIKSKAR*