AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0683060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0683060 MtrunA17_Chr4g0029701 98.753 882 11 0 1 882 1 882 0.0 1795
Msa0683060 MtrunA17_Chr2g0326271 70.838 895 238 7 2 882 3 888 0.0 1248
Msa0683060 MtrunA17_Chr8g0356491 34.234 111 68 2 351 461 299 404 6.71e-15 79.3
Msa0683060 MtrunA17_Chr5g0397151 30.556 108 72 1 351 458 302 406 3.71e-14 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0683060 AT5G60410.6 62.867 886 312 12 1 882 1 873 0.0 1124
Msa0683060 AT5G60410.1 62.867 886 312 12 1 882 1 873 0.0 1124
Msa0683060 AT5G60410.5 62.867 886 312 12 1 882 1 873 0.0 1123
Msa0683060 AT5G60410.2 62.867 886 312 12 1 882 1 873 0.0 1123
Msa0683060 AT5G60410.4 62.500 872 310 12 1 868 1 859 0.0 1098
Msa0683060 AT5G60410.3 62.069 841 302 12 1 837 1 828 0.0 1050

Find 308 sgRNAs with CRISPR-Local

Find 735 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGCAGCTTCTTTGCTTCT+TGG 0.130240 4_4:-45412447 Msa0683060:intron
TTTCCTAATGAAGATGATTT+TGG 0.169950 4_4:-45414373 Msa0683060:CDS
GTAGTTTAAACTTCCTAATT+TGG 0.175627 4_4:-45411982 Msa0683060:three_prime_UTR
GAAAGTGAACGTCTGGATTT+AGG 0.177524 4_4:-45415000 Msa0683060:CDS
TTGTCTCAGTTTCCAGAATA+TGG 0.204078 4_4:-45419193 Msa0683060:intron
AACCATCTGCAATATCATTT+TGG 0.221232 4_4:+45414473 None:intergenic
TTTCCCAACAGCATTCTTCT+TGG 0.230199 4_4:+45419169 None:intergenic
CTGGTTGTGGCCAACTTTAC+AGG 0.240074 4_4:+45417642 None:intergenic
GAACTTGTTTCAAGAACTTT+AGG 0.253657 4_4:-45412292 Msa0683060:three_prime_UTR
GCAAATACTTTGGCTGATTC+TGG 0.265030 4_4:-45413878 Msa0683060:intron
CGTCTGGATTTAGGGATTCT+TGG 0.266687 4_4:-45414991 Msa0683060:CDS
CAATTTCTAAATACAATATC+TGG 0.271050 4_4:+45412258 None:intergenic
TGATTAGGGTTTGGAGATTA+GGG 0.273354 4_4:+45421603 None:intergenic
TCCGAAGGCTAAACATTTAC+AGG 0.274958 4_4:+45411894 None:intergenic
TTTCAATCGCATCACTTCTA+TGG 0.279502 4_4:-45415173 Msa0683060:intron
CCAGATCCCAAAGCAGTTTC+GGG 0.280923 4_4:+45414199 None:intergenic
GTGATTAGGGTTTGGAGATT+AGG 0.283221 4_4:+45421602 None:intergenic
TTCAATTCTAGACGCACTTT+TGG 0.288718 4_4:+45411763 None:intergenic
ACCTTGCTCATCTGAGAGTA+TGG 0.290977 4_4:+45419798 None:intergenic
GCCAGATCCCAAAGCAGTTT+CGG 0.293735 4_4:+45414198 None:intergenic
ACTCCTTTGGAATTAAGTTT+AGG 0.304656 4_4:+45415670 None:intergenic
GGTGATGCTTCCACTCAAAA+TGG 0.305594 4_4:-45413941 Msa0683060:CDS
CTCTGGTGGAAGATATAAAT+TGG 0.307082 4_4:-45412180 Msa0683060:three_prime_UTR
TGCAGATAAAATATTCCTAA+TGG 0.309110 4_4:+45411946 None:intergenic
ATTCTTCTTGGCCCATATTC+TGG 0.317429 4_4:+45419181 None:intergenic
GAAGTGATGCGATTGAAATA+AGG 0.318290 4_4:+45415178 None:intergenic
CCCTCTTTGGCAAATGATAT+TGG 0.318406 4_4:-45412138 Msa0683060:three_prime_UTR
GAAAGAGCAGGTGGCAAAAT+TGG 0.320071 4_4:-45419150 Msa0683060:CDS
CTGGTTTAAAACTTGGCATT+AGG 0.321743 4_4:-45414861 Msa0683060:CDS
AGAATGAATCGGAGGTGATT+AGG 0.322444 4_4:+45421588 None:intergenic
GGAGGAATCGCAATGGGAAT+TGG 0.324383 4_4:-45414840 Msa0683060:CDS
ACTCAGGAAAATGCAGATAT+CGG 0.327194 4_4:-45418886 Msa0683060:intron
TATACAGACCTAGCAGTTAA+TGG 0.329641 4_4:-45416900 Msa0683060:intron
CCTCCGATTCATTCTTATTA+CGG 0.331934 4_4:-45421580 Msa0683060:intron
GAGGGGCAGGTGCAAGCATT+AGG 0.331985 4_4:+45412156 None:intergenic
CCCGAAACTGCTTTGGGATC+TGG 0.333745 4_4:-45414199 Msa0683060:CDS
CTTGTACCTTTCTATTGATT+CGG 0.341942 4_4:-45412334 Msa0683060:CDS
TGCTGATAGCGACAGTGATT+TGG 0.342121 4_4:-45415574 Msa0683060:CDS
CACGCGTCTGTCGTTGTGTT+GGG 0.342273 4_4:-45415617 Msa0683060:CDS
ATTCCAAAATCATCTTCATT+AGG 0.342360 4_4:+45414370 None:intergenic
GGTGGGGAAAATTTCCCATT+AGG 0.345190 4_4:-45411961 Msa0683060:three_prime_UTR
CTCGGTGGAAGTTCATGCTT+GGG 0.346082 4_4:-45414400 Msa0683060:CDS
ATAGGTCCGATTGCTTCTTC+TGG 0.348679 4_4:-45421741 Msa0683060:five_prime_UTR
GTCATTGCCTTCTGCATCTC+AGG 0.353133 4_4:-45414335 Msa0683060:CDS
ATTGGCTCCCGAAACTGCTT+TGG 0.354081 4_4:-45414206 Msa0683060:CDS
TGAACGACAAGGTTCCATTC+AGG 0.356491 4_4:-45416938 Msa0683060:CDS
GACAACCCATTGGCATTTGC+TGG 0.356540 4_4:-45414115 Msa0683060:CDS
ATCACCATCCCGACCACTTT+CGG 0.356985 4_4:+45414714 None:intergenic
AAAGTGAACGTCTGGATTTA+GGG 0.357301 4_4:-45414999 Msa0683060:CDS
TGCTTGCACCTGCCCCTCTT+TGG 0.359053 4_4:-45412151 Msa0683060:three_prime_UTR
AGTTCACAATAAAATTTATC+AGG 0.361374 4_4:+45418414 None:intergenic
GGTAGATAATTGAAGAATAA+AGG 0.361702 4_4:+45412050 None:intergenic
GAATGAATCGGAGGTGATTA+GGG 0.364415 4_4:+45421589 None:intergenic
TTAGTTTGCGGCAACACGTC+CGG 0.366631 4_4:+45421783 None:intergenic
GGCCAATGGCATCTTCCTAA+TGG 0.367292 4_4:-45414970 Msa0683060:CDS
AGTGTTAACCAGGGTGGTGG+TGG 0.369509 4_4:-45414685 Msa0683060:CDS
ACCTGTAAATGTTTAGCCTT+CGG 0.369833 4_4:-45411895 Msa0683060:three_prime_UTR
TTGGCTCCCGAAACTGCTTT+GGG 0.370189 4_4:-45414205 Msa0683060:CDS
ATTTAGAAATTGAAAGAAGT+TGG 0.375682 4_4:-45412247 Msa0683060:three_prime_UTR
AGTGATGAGGTGCAATTAAT+AGG 0.378729 4_4:+45414241 None:intergenic
CAGTATAAGCCTTCGTTGTC+CGG 0.381422 4_4:-45415532 Msa0683060:intron
TTGATTCGGAATCGGAATAA+AGG 0.381805 4_4:-45412320 Msa0683060:exon
CATTGTCTCTGGATGGGACT+TGG 0.386225 4_4:+45413903 None:intergenic
ATGCCTTCCATAGGTTTCTC+TGG 0.386479 4_4:+45418447 None:intergenic
TGTGGAAGTACATTGGAAAC+AGG 0.389365 4_4:-45418741 Msa0683060:CDS
AGTATTTGCGCCATTGTCTC+TGG 0.389636 4_4:+45413892 None:intergenic
GACGACTCAGCTGGTCTTGT+GGG 0.390350 4_4:+45414064 None:intergenic
GCCAATATCATTTGCCAAAG+AGG 0.391429 4_4:+45412137 None:intergenic
CTTACTCTCGGAGGTGGTGC+TGG 0.391540 4_4:-45413974 Msa0683060:CDS
GTTCTCTCCACGCACTGCAC+TGG 0.391843 4_4:+45417115 None:intergenic
AACACGTCCGGGTTAAGTTT+CGG 0.392113 4_4:+45421795 None:intergenic
CAGCACCACCTCCGAGAGTA+AGG 0.392682 4_4:+45413975 None:intergenic
ATACATACTGCCACGTTATG+AGG 0.394255 4_4:+45412211 None:intergenic
AACACTGAAGCAAGTAAAAC+AGG 0.397029 4_4:-45414905 Msa0683060:CDS
GGTCTATTAGTTGTTCGAAT+AGG 0.398032 4_4:+45416725 None:intergenic
ATGGTGTTTCCACTGAAGAT+TGG 0.399962 4_4:-45414003 Msa0683060:CDS
CAATAAAATTTATCAGGAAC+TGG 0.400321 4_4:+45418420 None:intergenic
AATGCAAGGTTTGAATCTTC+CGG 0.401374 4_4:+45415399 None:intergenic
TGTCTCAGTTTCCAGAATAT+GGG 0.403486 4_4:-45419192 Msa0683060:intron
AATCGGAGGTGATTAGGGTT+TGG 0.403557 4_4:+45421594 None:intergenic
CTGCATCAGAACCGAACAAT+TGG 0.403934 4_4:+45414299 None:intergenic
AGATTCTGATCTTCAGTGTA+TGG 0.405129 4_4:+45414421 None:intergenic
GAGACAACAAACACCTCTTC+TGG 0.405142 4_4:-45414802 Msa0683060:CDS
CGGCAGGGAGTATTGATTGA+TGG 0.410219 4_4:+45421647 None:intergenic
TGATGGCTCTTGGCGTGTTA+AGG 0.415872 4_4:-45415031 Msa0683060:CDS
TCAGTTAGGACTTTCAAAAC+AGG 0.417332 4_4:-45420058 Msa0683060:CDS
GAAGAGGTGTTTGTTGTCTC+GGG 0.417393 4_4:+45414805 None:intergenic
CAGAAGGCGCAGTTTGCAAC+AGG 0.417817 4_4:-45416448 Msa0683060:intron
AGAAGAGGTGTTTGTTGTCT+CGG 0.418486 4_4:+45414804 None:intergenic
AAGTGATGCGATTGAAATAA+GGG 0.420028 4_4:+45415179 None:intergenic
ATTGGAATAACAACTTGTTC+AGG 0.423238 4_4:+45414751 None:intergenic
TGAAGAAGACAATGACATAT+TGG 0.426237 4_4:-45414524 Msa0683060:CDS
GCAGATAAAATATTCCTAAT+GGG 0.426732 4_4:+45411947 None:intergenic
TCCCTTTGTACTTCTACTGC+TGG 0.427026 4_4:-45414946 Msa0683060:CDS
CCTTTCTATTGATTCGGAAT+CGG 0.428452 4_4:-45412328 Msa0683060:CDS
TGGTGGTTGTTATTTGCAAT+TGG 0.428837 4_4:+45414493 None:intergenic
GGCTCACCGTCAGACTCCTT+TGG 0.429043 4_4:+45415657 None:intergenic
GGTCCAGGATTCCAATTGTT+CGG 0.430991 4_4:-45414310 Msa0683060:CDS
TCGGAGCCACTGCTGCTCAT+TGG 0.433629 4_4:+45414733 None:intergenic
TTCTCTCCACGCACTGCACT+GGG 0.434383 4_4:+45417116 None:intergenic
GATCAAGCAAATGTCTCTAA+TGG 0.441265 4_4:-45414022 Msa0683060:CDS
AGGGGCAGGTGCAAGCATTA+GGG 0.443121 4_4:+45412157 None:intergenic
AAGGATGTGCTGACTCAGTT+AGG 0.444292 4_4:-45420072 Msa0683060:CDS
TCCTTTGTTACCTGTAAAGT+TGG 0.445895 4_4:-45417652 Msa0683060:CDS
GAGGAATCGCAATGGGAATT+GGG 0.446679 4_4:-45414839 Msa0683060:CDS
GGTTCAAGAATGAAGATTGC+CGG 0.447230 4_4:-45415418 Msa0683060:CDS
GCGAGCATCACATACTGTTA+AGG 0.451776 4_4:+45416497 None:intergenic
CTCTTACAAGATTCCTCTGC+TGG 0.453644 4_4:-45414172 Msa0683060:CDS
TGCTGACTTAAACGGTGGTT+TGG 0.454513 4_4:-45414140 Msa0683060:CDS
GGACCTGCTGGTTTAAAACT+TGG 0.454520 4_4:-45414868 Msa0683060:CDS
TCTGCATCTCAGGCTGGTCC+AGG 0.454585 4_4:-45414325 Msa0683060:CDS
TTGCCTTCTGCATCTCAGGC+TGG 0.454882 4_4:-45414331 Msa0683060:CDS
GAAGTACAAAGGGATCCATT+AGG 0.456957 4_4:+45414955 None:intergenic
CGGACAGATGCTGACTTAAA+CGG 0.458317 4_4:-45414148 Msa0683060:CDS
GTGGAAATGGATTTGGTAGC+CGG 0.462405 4_4:-45421380 Msa0683060:exon
ATTGAAGAATAAAGGAATGA+TGG 0.462704 4_4:+45412058 None:intergenic
ATGCTTGATATTGAAGTTGA+CGG 0.463949 4_4:-45412093 Msa0683060:three_prime_UTR
CACATCTGCTCAGGTGGGTG+GGG 0.465487 4_4:-45414572 Msa0683060:CDS
ATGCAGAAGGCAATGACCAC+AGG 0.465646 4_4:+45414341 None:intergenic
AGTATGTATTGAGGCATCTC+TGG 0.469577 4_4:-45412197 Msa0683060:three_prime_UTR
TCACCCATCAGTCGGAATAC+TGG 0.470078 4_4:+45417623 None:intergenic
AGGTTCCATTCAGGATTCAA+TGG 0.470932 4_4:-45416929 Msa0683060:CDS
TGTAGTAGATTGAATTTGAA+AGG 0.471804 4_4:+45418785 None:intergenic
TGAAATCACGCACACGCGGC+AGG 0.477092 4_4:+45421631 None:intergenic
CAGTGGCTCCGAAAGTGGTC+GGG 0.478789 4_4:-45414722 Msa0683060:CDS
TGCAGAGGCCTCTGATGCAT+TGG 0.480231 4_4:-45414281 Msa0683060:CDS
AGACCTGGTTCTCAGTTGCT+TGG 0.480715 4_4:-45416707 Msa0683060:CDS
AGACAATGGCGCAAATACTT+TGG 0.481858 4_4:-45413888 Msa0683060:CDS
GGTTACTCCATGCCACCTCC+TGG 0.482671 4_4:-45414454 Msa0683060:CDS
CGTGCAAGAGCATCTTCAAA+AGG 0.484446 4_4:+45415636 None:intergenic
AAAGAGTGAAAGTGAACGTC+TGG 0.487302 4_4:-45415007 Msa0683060:CDS
TTTAAACTTCCTAATTTGGT+GGG 0.487863 4_4:-45411978 Msa0683060:three_prime_UTR
GCACGCGTCTGTCGTTGTGT+TGG 0.491160 4_4:-45415618 Msa0683060:CDS
CTCAGGAAAATGCAGATATC+GGG 0.492701 4_4:-45418885 Msa0683060:intron
ATCTACCGAGGGTATAGTGC+TGG 0.494005 4_4:-45412034 Msa0683060:three_prime_UTR
TTGCCGCAAACTAACCGTAT+TGG 0.495904 4_4:-45421774 Msa0683060:five_prime_UTR
AATTGGTGGATGACACATAT+AGG 0.496338 4_4:-45419133 Msa0683060:intron
TAGTTTGCGGCAACACGTCC+GGG 0.496662 4_4:+45421784 None:intergenic
ATCATTTGCCAAAGAGGGGC+AGG 0.497273 4_4:+45412143 None:intergenic
AAAACAAGAATTTGATGTTG+AGG 0.498260 4_4:-45417056 Msa0683060:intron
GTTTAAACTTCCTAATTTGG+TGG 0.500127 4_4:-45411979 Msa0683060:three_prime_UTR
AGGTGAAGCCTGATGGCTCT+TGG 0.500229 4_4:-45415041 Msa0683060:CDS
TGATCTAGCATCAAAGGGTC+AGG 0.502689 4_4:-45418856 Msa0683060:CDS
GTGTATGGGTCAACAATTCC+AGG 0.503406 4_4:+45414436 None:intergenic
TTTGCGCCATTGTCTCTGGA+TGG 0.506095 4_4:+45413896 None:intergenic
ATTGATTATTCTACTACCAA+TGG 0.508427 4_4:-45414658 Msa0683060:CDS
TAGAAATTGAAAGAAGTTGG+AGG 0.509262 4_4:-45412244 Msa0683060:three_prime_UTR
AACTGATGTGTTGCCACACT+TGG 0.509642 4_4:+45418481 None:intergenic
ATACCGTAATAAGAATGAAT+CGG 0.509830 4_4:+45421577 None:intergenic
GGAAACAGGGGATTTGATCA+AGG 0.511350 4_4:-45418727 Msa0683060:intron
GAACCGAACAATTGGAATCC+TGG 0.511458 4_4:+45414307 None:intergenic
GTATAGTTGGTCATTCAATC+TGG 0.511530 4_4:-45412004 Msa0683060:three_prime_UTR
GTGTTAACCAGGGTGGTGGT+GGG 0.511734 4_4:-45414684 Msa0683060:CDS
AGCCACTGATCTAGCATCAA+AGG 0.512610 4_4:-45418862 Msa0683060:CDS
ATATTGAAGTTGACGGGTTG+TGG 0.513525 4_4:-45412086 Msa0683060:three_prime_UTR
CCAATATCATTTGCCAAAGA+GGG 0.514702 4_4:+45412138 None:intergenic
AATAATGTTGATTTAGCTCG+TGG 0.515010 4_4:-45414610 Msa0683060:CDS
TCTCGGTGGAAGTTCATGCT+TGG 0.515187 4_4:-45414401 Msa0683060:CDS
ATCAATAGAAAGGTACAAGC+GGG 0.515538 4_4:+45412338 None:intergenic
TACTACCAATGGAATTGAGA+TGG 0.520220 4_4:-45414647 Msa0683060:CDS
AATTCTCTTGTTGAATCCGA+AGG 0.520603 4_4:+45411879 None:intergenic
GGAGCTAACGGTCGTGATGA+TGG 0.522397 4_4:-45416686 Msa0683060:CDS
TTGCGCCATTGTCTCTGGAT+GGG 0.523797 4_4:+45413897 None:intergenic
TTAACACGCCAAGAGCCATC+AGG 0.524906 4_4:+45415033 None:intergenic
ACACATCTGCTCAGGTGGGT+GGG 0.527629 4_4:-45414573 Msa0683060:CDS
TAAAATTTATCAGGAACTGG+TGG 0.527907 4_4:+45418423 None:intergenic
TCTCAGTTGCTTGGAGCTAA+CGG 0.528194 4_4:-45416698 Msa0683060:CDS
GTTTAAAACTTGGCATTAGG+AGG 0.528847 4_4:-45414858 Msa0683060:CDS
TCCAGCAGTAGAAGTACAAA+GGG 0.531371 4_4:+45414945 None:intergenic
AGCAGCAGTGGCTCCGAAAG+TGG 0.531558 4_4:-45414727 Msa0683060:CDS
AACAATTCCAGGAGGTGGCA+TGG 0.531645 4_4:+45414447 None:intergenic
GCATTAGGAGGAATCGCAAT+GGG 0.531717 4_4:-45414846 Msa0683060:CDS
TGCTTGATATTGAAGTTGAC+GGG 0.533300 4_4:-45412092 Msa0683060:three_prime_UTR
TGAAGATGTTACAGAGGTTG+AGG 0.533950 4_4:-45415061 Msa0683060:CDS
ACCACCACCCTGGTTAACAC+TGG 0.535166 4_4:+45414687 None:intergenic
ATTCAAACCTTGCATTCACA+TGG 0.535289 4_4:-45415392 Msa0683060:CDS
TGAAAGTACCATTAACTGCT+AGG 0.535333 4_4:+45416892 None:intergenic
AACACATCTGCTCAGGTGGG+TGG 0.535405 4_4:-45414574 Msa0683060:CDS
CATCTCCAGCAAATGCCAAT+GGG 0.537152 4_4:+45414110 None:intergenic
ATTTAGGGATTCTTGGCCAA+TGG 0.537251 4_4:-45414984 Msa0683060:CDS
TTCAAAACAGGGAAAGAAGC+AGG 0.537787 4_4:-45420046 Msa0683060:intron
CCGATTCCGAATCAATAGAA+AGG 0.537993 4_4:+45412328 None:intergenic
TATTATTCCAGAGAAACCTA+TGG 0.538683 4_4:-45418454 Msa0683060:CDS
GCATAACACATCTGCTCAGG+TGG 0.539010 4_4:-45414578 Msa0683060:CDS
AATGAATCAACGGTCAAGAA+AGG 0.539654 4_4:-45415341 Msa0683060:intron
GGATTTGGTAGCCGGTATCA+AGG 0.542036 4_4:-45421372 Msa0683060:intron
ATCAGTCGGAATACTGGTTG+TGG 0.542117 4_4:+45417629 None:intergenic
TGATGATCCCAGTGTTAACC+AGG 0.542672 4_4:-45414695 Msa0683060:CDS
GCTCCAAGCAACTGAGAACC+AGG 0.545103 4_4:+45416704 None:intergenic
GGTGGTGCTGGCGGTAGTAA+TGG 0.547848 4_4:-45413962 Msa0683060:CDS
TATCCAATACGGTTAGTTTG+CGG 0.549016 4_4:+45421771 None:intergenic
TTAAACTTCCTAATTTGGTG+GGG 0.549491 4_4:-45411977 Msa0683060:three_prime_UTR
TACGCATAACACATCTGCTC+AGG 0.550755 4_4:-45414581 Msa0683060:CDS
AGAGCAAGTAGACCAAGGTC+AGG 0.551131 4_4:-45412402 Msa0683060:CDS
TAGCGACAGTGATTTGGAAG+TGG 0.551318 4_4:-45415568 Msa0683060:CDS
TGGTTGTTATTTGCAATTGG+AGG 0.553691 4_4:+45414496 None:intergenic
ACAACCAGTATTCCGACTGA+TGG 0.554333 4_4:-45417627 Msa0683060:CDS
ATCACTGAACGGTTATGCAT+TGG 0.555537 4_4:-45414224 Msa0683060:CDS
GAAATCACGCACACGCGGCA+GGG 0.556492 4_4:+45421632 None:intergenic
TGGAGAAACAAGAATCTTTG+CGG 0.556791 4_4:+45412115 None:intergenic
ACTGGTGGGATGCCTTCCAT+AGG 0.557028 4_4:+45418438 None:intergenic
TCATCTCCAGCAAATGCCAA+TGG 0.557087 4_4:+45414109 None:intergenic
TGGGCCAAGAAGAATGCTGT+TGG 0.557207 4_4:-45419173 Msa0683060:CDS
GCCACTGATCTAGCATCAAA+GGG 0.557914 4_4:-45418861 Msa0683060:CDS
CCCAGTGTTAACCAGGGTGG+TGG 0.558647 4_4:-45414688 Msa0683060:CDS
GATCCTAAACTTAATTCCAA+AGG 0.559168 4_4:-45415673 Msa0683060:CDS
GCAGTGGCTCCGAAAGTGGT+CGG 0.559727 4_4:-45414723 Msa0683060:CDS
GGGCCAAGAAGAATGCTGTT+GGG 0.560934 4_4:-45419172 Msa0683060:CDS
TTCTGTAGGATCTCGTCGAT+CGG 0.560941 4_4:-45419828 Msa0683060:intron
CACCAAAATGATATTGCAGA+TGG 0.562331 4_4:-45414475 Msa0683060:CDS
CCACCACCCTGGTTAACACT+GGG 0.563823 4_4:+45414688 None:intergenic
ACAGATGCTGACTTAAACGG+TGG 0.564719 4_4:-45414145 Msa0683060:CDS
TTCTGGTCATATATTAAGAG+AGG 0.564933 4_4:-45414785 Msa0683060:CDS
AGAATCCATCTCAATTCCAT+TGG 0.565368 4_4:+45414642 None:intergenic
GGGTCAACAATTCCAGGAGG+TGG 0.565780 4_4:+45414442 None:intergenic
ACGCGTCTGTCGTTGTGTTG+GGG 0.565862 4_4:-45415616 Msa0683060:CDS
CGTATTGGATAATCGTGGAT+AGG 0.565899 4_4:-45421759 Msa0683060:five_prime_UTR
AGACGACTCAGCTGGTCTTG+TGG 0.566685 4_4:+45414063 None:intergenic
GGCTCCGAAAGTGGTCGGGA+TGG 0.567316 4_4:-45414718 Msa0683060:CDS
AGAGCAGGTGGCAAAATTGG+TGG 0.568651 4_4:-45419147 Msa0683060:CDS
GATTCTGATCTTCAGTGTAT+GGG 0.568709 4_4:+45414422 None:intergenic
ATGATGATATACCTTGATAC+CGG 0.569499 4_4:+45421361 None:intergenic
TGTGGCCATTGAATCCTGAA+TGG 0.572530 4_4:+45416924 None:intergenic
CTGTCTCTGTGGAAGTACAT+TGG 0.572912 4_4:-45418748 Msa0683060:CDS
GTCAACTTCAATATCAAGCA+TGG 0.573150 4_4:+45412095 None:intergenic
CTCCACGCACTGCACTGGGT+TGG 0.574223 4_4:+45417120 None:intergenic
TATTCTTCAATTATCTACCG+AGG 0.574617 4_4:-45412046 Msa0683060:three_prime_UTR
CTCCAGCAGTAGAAGTACAA+AGG 0.578719 4_4:+45414944 None:intergenic
ACCCTTTGATGCTAGATCAG+TGG 0.579842 4_4:+45418860 None:intergenic
ATTCTTCAATTATCTACCGA+GGG 0.581186 4_4:-45412045 Msa0683060:three_prime_UTR
TTTCCGTATAAAAGAGCTCA+AGG 0.582643 4_4:-45420091 Msa0683060:CDS
TTCTGCATAGACGACTCAGC+TGG 0.582789 4_4:+45414055 None:intergenic
TACACTGAAGATCAGAATCT+CGG 0.583134 4_4:-45414418 Msa0683060:CDS
TGGTTTGGTTGACAACCCAT+TGG 0.583485 4_4:-45414125 Msa0683060:CDS
CAAATGAACCAATGCATCAG+AGG 0.583738 4_4:+45414273 None:intergenic
TAGGGGTTCGAATTGTCAGA+AGG 0.586441 4_4:-45416464 Msa0683060:CDS
ATCCATTAGGAAGATGCCAT+TGG 0.587077 4_4:+45414968 None:intergenic
ATGTATTGAGGCATCTCTGG+TGG 0.587373 4_4:-45412194 Msa0683060:three_prime_UTR
AAACAACCCATGTGAATGCA+AGG 0.588755 4_4:+45415385 None:intergenic
GTCAGATAGTAGTAATGTGA+AGG 0.588763 4_4:-45418829 Msa0683060:CDS
GAGGTTGAGGTGAAGCCTGA+TGG 0.589171 4_4:-45415048 Msa0683060:CDS
TCTTAATATATGACCAGAAG+AGG 0.589965 4_4:+45414789 None:intergenic
TATTACCATTTATAGATGAG+TGG 0.593609 4_4:-45415439 Msa0683060:intron
GATTGGACATCCCTTACTCT+CGG 0.594442 4_4:-45413986 Msa0683060:CDS
GAATGCTGTTGGGAAAGAGC+AGG 0.595394 4_4:-45419162 Msa0683060:CDS
TGCATAACCGTTCAGTGATG+AGG 0.596581 4_4:+45414228 None:intergenic
CTATCCACGATTATCCAATA+CGG 0.598911 4_4:+45421760 None:intergenic
TCAACTCACAAGAGCAGACA+AGG 0.599982 4_4:-45417089 Msa0683060:CDS
GTTATTCCAATGAGCAGCAG+TGG 0.601585 4_4:-45414739 Msa0683060:CDS
ATTGTTCGGTTCTGATGCAG+AGG 0.604658 4_4:-45414296 Msa0683060:CDS
AAAATTTATCAGGAACTGGT+GGG 0.607402 4_4:+45418424 None:intergenic
GTGAAAGGACTACCTGACCT+TGG 0.608339 4_4:+45412390 None:intergenic
AAGGGATGTCCAATCTTCAG+TGG 0.608756 4_4:+45413994 None:intergenic
CAACCAGTATTCCGACTGAT+GGG 0.609101 4_4:-45417626 Msa0683060:intron
ATCACGCCGCATACAAAAGA+CGG 0.610322 4_4:-45416534 Msa0683060:CDS
AGCATCTGTCCGTCCAGCAG+AGG 0.610516 4_4:+45414159 None:intergenic
TGGCACACCGAAACTTAACC+CGG 0.611981 4_4:-45421802 Msa0683060:five_prime_UTR
CAGTTAGGACTTTCAAAACA+GGG 0.613916 4_4:-45420057 Msa0683060:CDS
ACTCTCGGAGGTGGTGCTGG+CGG 0.614564 4_4:-45413971 Msa0683060:CDS
GGCATTAGGAGGAATCGCAA+TGG 0.614693 4_4:-45414847 Msa0683060:CDS
ACATCCCTTACTCTCGGAGG+TGG 0.615368 4_4:-45413980 Msa0683060:CDS
CGCGTCTGTCGTTGTGTTGG+GGG 0.617331 4_4:-45415615 Msa0683060:CDS
TGCTGTTGGGAAAGAGCAGG+TGG 0.617341 4_4:-45419159 Msa0683060:CDS
TACAAGATTCCTCTGCTGGA+CGG 0.618020 4_4:-45414168 Msa0683060:CDS
TTCAAACCTTGCATTCACAT+GGG 0.620953 4_4:-45415391 Msa0683060:CDS
GTGGAAGTACATTGGAAACA+GGG 0.621176 4_4:-45418740 Msa0683060:CDS
TGCAGAAGGCAATGACCACA+GGG 0.622669 4_4:+45414342 None:intergenic
ACAAAGATTCGCTGTCTCTG+TGG 0.626008 4_4:-45418759 Msa0683060:CDS
CAATATGCCCACCACCACCC+TGG 0.626286 4_4:+45414677 None:intergenic
TAAAACCAGCACTATACCCT+CGG 0.626339 4_4:+45412029 None:intergenic
TCGGTGGAAGTTCATGCTTG+GGG 0.626592 4_4:-45414399 Msa0683060:CDS
TACCAACCCAGTGCAGTGCG+TGG 0.627424 4_4:-45417122 Msa0683060:CDS
AGCACCACCTCCGAGAGTAA+GGG 0.628927 4_4:+45413976 None:intergenic
TAACGTGGCAGTATGTATTG+AGG 0.629919 4_4:-45412206 Msa0683060:three_prime_UTR
TTAATTCCAAAGGAGTCTGA+CGG 0.634359 4_4:-45415663 Msa0683060:CDS
CAAGTCCCATCCAGAGACAA+TGG 0.637497 4_4:-45413902 Msa0683060:CDS
GGACCAGCCTGAGATGCAGA+AGG 0.640187 4_4:+45414328 None:intergenic
CCATGTACTCACCCATCAGT+CGG 0.640779 4_4:+45417615 None:intergenic
GCCAACTTTACAGGTAACAA+AGG 0.641343 4_4:+45417651 None:intergenic
AATTGCACCTCATCACTGAA+CGG 0.645687 4_4:-45414235 Msa0683060:CDS
ATTCCAGAGAAACCTATGGA+AGG 0.646238 4_4:-45418450 Msa0683060:CDS
GATCAGATTGGTTACTACTG+CGG 0.646694 4_4:-45421475 Msa0683060:intron
CTGAAGCAAGTAAAACAGGA+AGG 0.648396 4_4:-45414901 Msa0683060:CDS
CAATATCATTTGCCAAAGAG+GGG 0.648455 4_4:+45412139 None:intergenic
TCCATACTCTCAGATGAGCA+AGG 0.650138 4_4:-45419799 Msa0683060:intron
GTGTATGCTTCTGAACGACA+AGG 0.650450 4_4:-45416949 Msa0683060:CDS
CCGTAATAAGAATGAATCGG+AGG 0.655984 4_4:+45421580 None:intergenic
TTGCGGTGAAGATGTTACAG+AGG 0.656546 4_4:-45415067 Msa0683060:CDS
ACGACTCAGCTGGTCTTGTG+GGG 0.660023 4_4:+45414065 None:intergenic
AATCAATAGAAAGGTACAAG+CGG 0.660315 4_4:+45412337 None:intergenic
CATAACACATCTGCTCAGGT+GGG 0.660429 4_4:-45414577 Msa0683060:CDS
ATTCGAACAACTAATAGACC+TGG 0.670126 4_4:-45416722 Msa0683060:CDS
CTGGTACAGATGATTAATTG+CGG 0.671508 4_4:-45415084 Msa0683060:intron
CACAAGAGCAGACAAGGACA+TGG 0.672436 4_4:-45417083 Msa0683060:CDS
CTGACAGAGCAAGTAGACCA+AGG 0.682371 4_4:-45412407 Msa0683060:CDS
TGGAAGTACATTGGAAACAG+GGG 0.683506 4_4:-45418739 Msa0683060:CDS
TTGTTGAAATCACGCACACG+CGG 0.686103 4_4:+45421627 None:intergenic
AAAGCCTTACCGGACAACGA+AGG 0.691607 4_4:+45415523 None:intergenic
ACTGAAGATCAGAATCTCGG+TGG 0.691772 4_4:-45414415 Msa0683060:CDS
TCAATAGAAAGGTACAAGCG+GGG 0.705417 4_4:+45412339 None:intergenic
CTAACCGTATTGGATAATCG+TGG 0.706163 4_4:-45421764 Msa0683060:five_prime_UTR
AGAAGCGAATAATCAACACA+TGG 0.712746 4_4:+45421447 None:intergenic
ATGATGCAAGATGCCAAGTG+TGG 0.722474 4_4:-45418494 Msa0683060:CDS
ACTGCTAGGTCTGTATACTG+TGG 0.722592 4_4:+45416906 None:intergenic
TGGACATCCCTTACTCTCGG+AGG 0.740031 4_4:-45413983 Msa0683060:CDS
GATGATCCCAGTGTTAACCA+GGG 0.753201 4_4:-45414694 Msa0683060:CDS
TATGGGTCAACAATTCCAGG+AGG 0.765207 4_4:+45414439 None:intergenic
GATCCCAGTGTTAACCAGGG+TGG 0.772459 4_4:-45414691 Msa0683060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGATATTGAATTTATA+TGG - chr4_4:45412358-45412377 Msa0683060:CDS 10.0%
!! AAAAATGCTAAATAATATAA+AGG + chr4_4:45415812-45415831 None:intergenic 10.0%
!!! TTTTCTTTTCTTTTATTTAA+TGG - chr4_4:45416262-45416281 Msa0683060:intron 10.0%
!!! TTTCTTTTCTTTTATTTAAT+GGG - chr4_4:45416263-45416282 Msa0683060:intron 10.0%
!! AAATAAAAGTTCAATTTAAA+AGG - chr4_4:45420663-45420682 Msa0683060:intron 10.0%
!! ATTTAACTATTGTTTAGTTA+AGG - chr4_4:45413084-45413103 Msa0683060:intron 15.0%
!! TATTAAATTCAGGATTAAAA+AGG + chr4_4:45413637-45413656 None:intergenic 15.0%
!!! TTTTAACAAAACATGAAAAT+AGG + chr4_4:45415695-45415714 None:intergenic 15.0%
!!! TTTCATGTTTTGTTAAAAAA+TGG - chr4_4:45415697-45415716 Msa0683060:intron 15.0%
!!! ATTATTTTACTACAAAACAA+AGG + chr4_4:45416008-45416027 None:intergenic 15.0%
!!! TAATTGTCTTGTTTAATATA+TGG - chr4_4:45416024-45416043 Msa0683060:intron 15.0%
!! CTTATACAAGTTAAAATAAA+TGG + chr4_4:45416909-45416928 None:intergenic 15.0%
!!! TTTTAAATTTCAAACCAATA+GGG + chr4_4:45417282-45417301 None:intergenic 15.0%
!!! TTTTTAAATTTCAAACCAAT+AGG + chr4_4:45417283-45417302 None:intergenic 15.0%
!! AAGATTTATGAACATATAAA+TGG + chr4_4:45418422-45418441 None:intergenic 15.0%
!! TATTTGAAGACTAATTTATT+TGG - chr4_4:45418443-45418462 Msa0683060:CDS 15.0%
!! TTGAAATCATACAATTTAAT+GGG + chr4_4:45419973-45419992 None:intergenic 15.0%
!!! TTTGAAATCATACAATTTAA+TGG + chr4_4:45419974-45419993 None:intergenic 15.0%
!!! CAATTTATTTTTCATTTGAT+GGG - chr4_4:45420497-45420516 Msa0683060:intron 15.0%
!!! TTGAACTTTTATTTAAAGTT+AGG + chr4_4:45420657-45420676 None:intergenic 15.0%
!! TAACTAAGTAAACAAAATAT+GGG + chr4_4:45420883-45420902 None:intergenic 15.0%
!!! TTTTGATATTTTGAAAAATG+TGG - chr4_4:45420920-45420939 Msa0683060:intron 15.0%
!!! AAATAGTTTTTCTATTTCAA+GGG - chr4_4:45421699-45421718 Msa0683060:five_prime_UTR 15.0%
!! AGAAAAAATTAAGCTAGAAT+TGG + chr4_4:45412011-45412030 None:intergenic 20.0%
!! TGAAATCAAATGAAAATGAA+TGG + chr4_4:45412051-45412070 None:intergenic 20.0%
!!! TCATTAATTTTTGCTTATGT+CGG - chr4_4:45412239-45412258 Msa0683060:three_prime_UTR 20.0%
!!! AATTTTTTTATCTTGTCTAG+TGG - chr4_4:45412588-45412607 Msa0683060:intron 20.0%
!! ATTTAAGAACATAAACTACA+AGG + chr4_4:45412731-45412750 None:intergenic 20.0%
!! GAAGAGGATTAATATTTAAA+AGG - chr4_4:45412794-45412813 Msa0683060:intron 20.0%
!! CATAATAAAATGAACTTGAA+AGG + chr4_4:45413227-45413246 None:intergenic 20.0%
!! GAAAAGCAATATAAGTAAAA+TGG - chr4_4:45413270-45413289 Msa0683060:intron 20.0%
!!! AATTTCAGTTGTATTTTTTC+TGG - chr4_4:45413312-45413331 Msa0683060:intron 20.0%
!! TTATGAATCATTTACTGAAT+AGG - chr4_4:45413912-45413931 Msa0683060:CDS 20.0%
!! CTATTATTGCTAATTTCAAT+AGG + chr4_4:45413974-45413993 None:intergenic 20.0%
!! GAGAGAGAAAAAAAAAATAA+GGG + chr4_4:45414049-45414068 None:intergenic 20.0%
!! AGAGAGAGAAAAAAAAAATA+AGG + chr4_4:45414050-45414069 None:intergenic 20.0%
!!! TTAATTGTGATTTTATCATG+TGG - chr4_4:45414280-45414299 Msa0683060:CDS 20.0%
!!! TAATTGTGATTTTATCATGT+GGG - chr4_4:45414281-45414300 Msa0683060:CDS 20.0%
!! AACTCATAACTTAAAATGAT+TGG - chr4_4:45414515-45414534 Msa0683060:CDS 20.0%
!! AGTTCACAATAAAATTTATC+AGG + chr4_4:45415143-45415162 None:intergenic 20.0%
!! AAGGAAAAAATTCAAAGAAA+GGG + chr4_4:45415202-45415221 None:intergenic 20.0%
!!! TCTGTTTTCAAATATTTGTA+TGG - chr4_4:45415741-45415760 Msa0683060:intron 20.0%
!!! CTGTTTTCAAATATTTGTAT+GGG - chr4_4:45415742-45415761 Msa0683060:intron 20.0%
!! AACAGAAAATATGAAATTAG+TGG + chr4_4:45415845-45415864 None:intergenic 20.0%
!! TATTGAAAATTAGACATAGT+TGG - chr4_4:45415970-45415989 Msa0683060:intron 20.0%
!! AACAAAATATAAGTGGTAAA+TGG + chr4_4:45416174-45416193 None:intergenic 20.0%
!! TTCAATCAACAAAATATAAG+TGG + chr4_4:45416181-45416200 None:intergenic 20.0%
!!! TTTTGTTGATTGAAATTCTA+TGG - chr4_4:45416187-45416206 Msa0683060:intron 20.0%
!! TTCTTATTAACTTTGACTAT+AGG - chr4_4:45416802-45416821 Msa0683060:intron 20.0%
!! GTAATAGAAAACTGATTAAT+AGG + chr4_4:45418101-45418120 None:intergenic 20.0%
!! AAACAATTAAATTCTTCAGA+AGG + chr4_4:45418296-45418315 None:intergenic 20.0%
!! AGAACATTTATGAATTAGAA+GGG + chr4_4:45419717-45419736 None:intergenic 20.0%
!! AAGAACATTTATGAATTAGA+AGG + chr4_4:45419718-45419737 None:intergenic 20.0%
!! TATAATATAGCCAAATAGAT+TGG + chr4_4:45420181-45420200 None:intergenic 20.0%
!! ATGAAAAATAAATTGCAACT+TGG + chr4_4:45420492-45420511 None:intergenic 20.0%
!!! GCAATTTATTTTTCATTTGA+TGG - chr4_4:45420496-45420515 Msa0683060:intron 20.0%
!!! GTTCTTAATTCTTTGATTTT+TGG - chr4_4:45420625-45420644 Msa0683060:intron 20.0%
!! CTAACTAAGTAAACAAAATA+TGG + chr4_4:45420884-45420903 None:intergenic 20.0%
!! CAATTTCTAAATACAATATC+TGG + chr4_4:45421299-45421318 None:intergenic 20.0%
!! ATTTAGAAATTGAAAGAAGT+TGG - chr4_4:45421307-45421326 Msa0683060:intron 20.0%
!!! GAATATTTTATCTGCATTTT+TGG - chr4_4:45421615-45421634 Msa0683060:five_prime_UTR 20.0%
!!! CAAATAGTTTTTCTATTTCA+AGG - chr4_4:45421698-45421717 Msa0683060:five_prime_UTR 20.0%
!!! AATAGTTTTTCTATTTCAAG+GGG - chr4_4:45421700-45421719 Msa0683060:five_prime_UTR 20.0%
!! TTAAATCCAGATGTAAAAAT+GGG + chr4_4:45421746-45421765 None:intergenic 20.0%
!! TTTAAATCCAGATGTAAAAA+TGG + chr4_4:45421747-45421766 None:intergenic 20.0%
! ATACCGTAATAAGAATGAAT+CGG + chr4_4:45411980-45411999 None:intergenic 25.0%
!!! TTCATTTGATTTGATCAGAT+TGG - chr4_4:45412067-45412086 Msa0683060:three_prime_UTR 25.0%
! TATTGAATTTATATGGACAG+TGG - chr4_4:45412365-45412384 Msa0683060:CDS 25.0%
!!! GTGTTATATAGTTTTAGTCA+TGG - chr4_4:45412454-45412473 Msa0683060:intron 25.0%
! TGGGGATATATATATATAGT+TGG - chr4_4:45412525-45412544 Msa0683060:intron 25.0%
! TAGTGGAAAATAATGAAGTT+TGG - chr4_4:45412605-45412624 Msa0683060:intron 25.0%
! TCTTATTATTCTTAGCTGTT+GGG + chr4_4:45412652-45412671 None:intergenic 25.0%
! ATCTTATTATTCTTAGCTGT+TGG + chr4_4:45412653-45412672 None:intergenic 25.0%
!!! AATTCACTACCAGTTTTATT+AGG + chr4_4:45412945-45412964 None:intergenic 25.0%
!!! CTGGTAGTGAATTATTTTAT+TGG - chr4_4:45412952-45412971 Msa0683060:intron 25.0%
!! ATTGATTTAAAAGACTGTCA+AGG + chr4_4:45413129-45413148 None:intergenic 25.0%
! TTATGCGGTGATATATTAAT+TGG - chr4_4:45413394-45413413 Msa0683060:intron 25.0%
! TATGCGGTGATATATTAATT+GGG - chr4_4:45413395-45413414 Msa0683060:intron 25.0%
!! GTTAATTTTTCCTATAAGAG+AGG + chr4_4:45413440-45413459 None:intergenic 25.0%
! ACAAATAACATTGACAGATT+TGG + chr4_4:45413553-45413572 None:intergenic 25.0%
!! CTGAATTTAATATGCTGTTT+CGG - chr4_4:45413645-45413664 Msa0683060:intron 25.0%
! TGATATTAATACCGATGTAT+TGG - chr4_4:45413853-45413872 Msa0683060:intron 25.0%
! TGCTAATTTCAATAGGATAA+TGG + chr4_4:45413967-45413986 None:intergenic 25.0%
!! GTTTTTGTCATAATTGTCTT+TGG - chr4_4:45413993-45414012 Msa0683060:CDS 25.0%
! TAAACTTTAGATGGAATCTT+AGG - chr4_4:45414017-45414036 Msa0683060:CDS 25.0%
! TTTCTAAGTTTACATGAGAA+AGG + chr4_4:45414331-45414350 None:intergenic 25.0%
! CAAAAACTCCAATAAGAAAT+AGG + chr4_4:45414636-45414655 None:intergenic 25.0%
!!! TTTGTATTTTGCTTTTACTC+AGG - chr4_4:45414652-45414671 Msa0683060:CDS 25.0%
! TGTAGTAGATTGAATTTGAA+AGG + chr4_4:45414772-45414791 None:intergenic 25.0%
! AATTATGTGTGATCACAAAA+AGG + chr4_4:45414966-45414985 None:intergenic 25.0%
! CAATAAAATTTATCAGGAAC+TGG + chr4_4:45415137-45415156 None:intergenic 25.0%
! GAAGGAAAAAATTCAAAGAA+AGG + chr4_4:45415203-45415222 None:intergenic 25.0%
!!! TCTTTGAATTTTTTCCTTCA+TGG - chr4_4:45415204-45415223 Msa0683060:CDS 25.0%
!!! AATTTTTTCCTTCATGGATT+AGG - chr4_4:45415210-45415229 Msa0683060:CDS 25.0%
!!! ATTTTTTCCTTCATGGATTA+GGG - chr4_4:45415211-45415230 Msa0683060:CDS 25.0%
! AAAATTATAAGCTTGCAACA+TGG + chr4_4:45415411-45415430 None:intergenic 25.0%
!! ATAACTGTGTTATTGTAGAA+GGG + chr4_4:45415510-45415529 None:intergenic 25.0%
!! TATAACTGTGTTATTGTAGA+AGG + chr4_4:45415511-45415530 None:intergenic 25.0%
! TACTTATTGCGGTAAATTTA+TGG - chr4_4:45415558-45415577 Msa0683060:CDS 25.0%
!! TCTTTTGTTCTTTGTATTCT+TGG - chr4_4:45415635-45415654 Msa0683060:CDS 25.0%
!! CTTTTGTTCTTTGTATTCTT+GGG - chr4_4:45415636-45415655 Msa0683060:CDS 25.0%
!! TTTTGTTCTTTGTATTCTTG+GGG - chr4_4:45415637-45415656 Msa0683060:CDS 25.0%
! ATCTTTGATAAAATAACCAG+AGG + chr4_4:45415784-45415803 None:intergenic 25.0%
!! TTCTCTCTTTTATAGGTTTT+GGG - chr4_4:45415866-45415885 Msa0683060:intron 25.0%
!! TGACTTGAATACTACATTTT+GGG - chr4_4:45416055-45416074 Msa0683060:intron 25.0%
! GTCATATTGCTAATAATTAC+TGG - chr4_4:45416084-45416103 Msa0683060:intron 25.0%
!!! TGGTTGAATTTTCTTTTTTG+AGG - chr4_4:45416210-45416229 Msa0683060:intron 25.0%
!!! TTCTTTTATTTAATGGGTCT+AGG - chr4_4:45416269-45416288 Msa0683060:intron 25.0%
! AAAATACTCCAATGAAGATT+AGG + chr4_4:45416371-45416390 None:intergenic 25.0%
! TTCAAACAGGAATATGATTT+AGG + chr4_4:45416404-45416423 None:intergenic 25.0%
! AAAACAAGAATTTGATGTTG+AGG - chr4_4:45416498-45416517 Msa0683060:CDS 25.0%
! TATTTCGAAAAATTACGTGT+AGG - chr4_4:45416578-45416597 Msa0683060:intron 25.0%
! ACAAATTATAATGCAATCAC+AGG + chr4_4:45416783-45416802 None:intergenic 25.0%
! AAATCGTATGTCTTAGAATT+AGG + chr4_4:45417437-45417456 None:intergenic 25.0%
! ATTTAAAGAAACCAACCAAT+AGG + chr4_4:45417576-45417595 None:intergenic 25.0%
! AAATCGTATGTCTTAGAATT+AGG + chr4_4:45417437-45417456 None:intergenic 25.0%
! TATTACCATTTATAGATGAG+TGG - chr4_4:45418115-45418134 Msa0683060:intron 25.0%
!!! TTTTGATCTTGATGTTTTTG+TGG - chr4_4:45418189-45418208 Msa0683060:intron 25.0%
!! TTTTTGTGGAAATGAATCAA+CGG - chr4_4:45418203-45418222 Msa0683060:intron 25.0%
!!! GACTAATTTATTTGGTTTTC+TGG - chr4_4:45418451-45418470 Msa0683060:CDS 25.0%
!! CATATATTAAGAGAGGTTTT+TGG - chr4_4:45418776-45418795 Msa0683060:CDS 25.0%
! ATTGATTATTCTACTACCAA+TGG - chr4_4:45418896-45418915 Msa0683060:intron 25.0%
!! TTTCCTAATGAAGATGATTT+TGG - chr4_4:45419181-45419200 Msa0683060:CDS 25.0%
! ATTCCAAAATCATCTTCATT+AGG + chr4_4:45419187-45419206 None:intergenic 25.0%
!!! AAGTGTATTTTAACAACAAC+AGG + chr4_4:45419843-45419862 None:intergenic 25.0%
! TTGATTTCATATTGATCTAG+TGG + chr4_4:45419997-45420016 None:intergenic 25.0%
! CATGAAAGAGTAAAAATCTT+CGG + chr4_4:45420036-45420055 None:intergenic 25.0%
!! GAAGATTTTTACTCTTTCAT+GGG - chr4_4:45420035-45420054 Msa0683060:intron 25.0%
!! AAGATTTTTACTCTTTCATG+GGG - chr4_4:45420036-45420055 Msa0683060:intron 25.0%
!! TTCAAACTCAATTTTTGAAC+AGG + chr4_4:45420077-45420096 None:intergenic 25.0%
! AACAATAATTGTCATGACAT+TGG - chr4_4:45420095-45420114 Msa0683060:CDS 25.0%
! ATGACATTGGATGATTAATT+GGG - chr4_4:45420108-45420127 Msa0683060:CDS 25.0%
!!! ACTTAGTTAGAAAGCATTAA+TGG - chr4_4:45420894-45420913 Msa0683060:intron 25.0%
!!! TGATATTTTGAAAAATGTGG+AGG - chr4_4:45420923-45420942 Msa0683060:intron 25.0%
! AATTATCTGATCAAGAACAA+GGG + chr4_4:45421047-45421066 None:intergenic 25.0%
! ATTGAAGAATAAAGGAATGA+TGG + chr4_4:45421499-45421518 None:intergenic 25.0%
! GGTAGATAATTGAAGAATAA+AGG + chr4_4:45421507-45421526 None:intergenic 25.0%
! GTAGTTTAAACTTCCTAATT+TGG - chr4_4:45421572-45421591 Msa0683060:intron 25.0%
! TTTAAACTTCCTAATTTGGT+GGG - chr4_4:45421576-45421595 Msa0683060:intron 25.0%
! GCAGATAAAATATTCCTAAT+GGG + chr4_4:45421610-45421629 None:intergenic 25.0%
! TGCAGATAAAATATTCCTAA+TGG + chr4_4:45421611-45421630 None:intergenic 25.0%
AAAAAACCAGAAGAAGCAAT+CGG + chr4_4:45411822-45411841 None:intergenic 30.0%
!!! ATTGCTTCTTCTGGTTTTTT+GGG - chr4_4:45411822-45411841 Msa0683060:three_prime_UTR 30.0%
!!! TCAGTTTTTGGTCAATTCTT+AGG - chr4_4:45412147-45412166 Msa0683060:three_prime_UTR 30.0%
!! ATTCTTAGGTTTTGTGGAAA+TGG - chr4_4:45412161-45412180 Msa0683060:three_prime_UTR 30.0%
ATGATGATATACCTTGATAC+CGG + chr4_4:45412196-45412215 None:intergenic 30.0%
!!! TTTTTTAATGGCAAGCTATG+CGG - chr4_4:45412398-45412417 Msa0683060:CDS 30.0%
! GGTATATATGCATTTTCGAT+TGG - chr4_4:45412419-45412438 Msa0683060:CDS 30.0%
! TATATGCATTTTCGATTGGT+TGG - chr4_4:45412423-45412442 Msa0683060:CDS 30.0%
!! TTTCGATTGGTTGGATTTTT+AGG - chr4_4:45412432-45412451 Msa0683060:CDS 30.0%
!!! TAGTTTTAGTCATGGTCATT+TGG - chr4_4:45412462-45412481 Msa0683060:intron 30.0%
! ATATAGTTGGTTCACTGTTT+AGG - chr4_4:45412538-45412557 Msa0683060:intron 30.0%
ATGTTATATTAGTCCCTCAT+CGG - chr4_4:45412753-45412772 Msa0683060:intron 30.0%
TGTAACCATTAACTAGACAT+GGG + chr4_4:45412894-45412913 None:intergenic 30.0%
TTGTAACCATTAACTAGACA+TGG + chr4_4:45412895-45412914 None:intergenic 30.0%
! GTTACAAACCAGTTTTACTA+CGG - chr4_4:45412908-45412927 Msa0683060:intron 30.0%
GTTCGTCATTTCTATGAATT+GGG - chr4_4:45412974-45412993 Msa0683060:intron 30.0%
!! TTGGAGGTACTTCTATAAAT+TGG + chr4_4:45413016-45413035 None:intergenic 30.0%
!! TTTATAGAAGTACCTCCAAT+TGG - chr4_4:45413017-45413036 Msa0683060:intron 30.0%
!! GTCAGTATTGAGTTTTTATG+CGG - chr4_4:45413379-45413398 Msa0683060:intron 30.0%
AATGAAGTCATTAGCATTCA+AGG + chr4_4:45413594-45413613 None:intergenic 30.0%
ATTAAAAAGGAAACAGCACA+TGG + chr4_4:45413624-45413643 None:intergenic 30.0%
CGAAACAGCATATTAAATTC+AGG + chr4_4:45413647-45413666 None:intergenic 30.0%
!! GTGTTTTTAATATGACGTCT+TGG - chr4_4:45413667-45413686 Msa0683060:intron 30.0%
GAGCAAGGTAAAATTATACA+CGG - chr4_4:45413770-45413789 Msa0683060:intron 30.0%
AGCAAGGTAAAATTATACAC+GGG - chr4_4:45413771-45413790 Msa0683060:intron 30.0%
AAGGATAGAATTAGACTCTA+TGG + chr4_4:45413802-45413821 None:intergenic 30.0%
TGTTGAAACTTCCAATACAT+CGG + chr4_4:45413867-45413886 None:intergenic 30.0%
GTCTTTGGTTAAACTTTAGA+TGG - chr4_4:45414008-45414027 Msa0683060:CDS 30.0%
GAAAAAAAAAATAAGGGCCT+TGG + chr4_4:45414043-45414062 None:intergenic 30.0%
AATTAACTACTCAACAAGGA+GGG + chr4_4:45414094-45414113 None:intergenic 30.0%
CTAGAATTAACTACTCAACA+AGG + chr4_4:45414098-45414117 None:intergenic 30.0%
ATGTATTCACAGAAATGATG+TGG - chr4_4:45414538-45414557 Msa0683060:CDS 30.0%
AACTCCAATAAGAAATAGGA+AGG + chr4_4:45414632-45414651 None:intergenic 30.0%
! ATATTTTTCTTCGTTCTCCA+TGG - chr4_4:45414861-45414880 Msa0683060:CDS 30.0%
! GCATATAATTTTATGGACCA+TGG + chr4_4:45414881-45414900 None:intergenic 30.0%
AGAAATATTGCATGTACAGT+GGG + chr4_4:45414904-45414923 None:intergenic 30.0%
AAGAAATATTGCATGTACAG+TGG + chr4_4:45414905-45414924 None:intergenic 30.0%
! GTGATCACACATAATTTTCA+TGG - chr4_4:45414970-45414989 Msa0683060:CDS 30.0%
!! GTTGCACATTTGATAACTTT+TGG - chr4_4:45415006-45415025 Msa0683060:CDS 30.0%
TATTATTCCAGAGAAACCTA+TGG - chr4_4:45415100-45415119 Msa0683060:intron 30.0%
AAAATTTATCAGGAACTGGT+GGG + chr4_4:45415133-45415152 None:intergenic 30.0%
TAAAATTTATCAGGAACTGG+TGG + chr4_4:45415134-45415153 None:intergenic 30.0%
TGTAATGTAGTATTCTCAGT+TGG - chr4_4:45415350-45415369 Msa0683060:CDS 30.0%
ACTAAAAATGGGTCACAATA+GGG + chr4_4:45415458-45415477 None:intergenic 30.0%
AACTAAAAATGGGTCACAAT+AGG + chr4_4:45415459-45415478 None:intergenic 30.0%
ATGTCTGCATATACTTATTG+CGG - chr4_4:45415547-45415566 Msa0683060:CDS 30.0%
AAATTTATGGCTCATGAAGT+TGG - chr4_4:45415571-45415590 Msa0683060:CDS 30.0%
AAACAATACAAAAGTTCCTC+TGG - chr4_4:45415765-45415784 Msa0683060:intron 30.0%
! TCTGTTGTTCTCTCTTTTAT+AGG - chr4_4:45415859-45415878 Msa0683060:intron 30.0%
! GTTCTCTCTTTTATAGGTTT+TGG - chr4_4:45415865-45415884 Msa0683060:intron 30.0%
!! CTGACTTGAATACTACATTT+TGG - chr4_4:45416054-45416073 Msa0683060:intron 30.0%
! GACTTGAATACTACATTTTG+GGG - chr4_4:45416056-45416075 Msa0683060:intron 30.0%
! ACTTGAATACTACATTTTGG+GGG - chr4_4:45416057-45416076 Msa0683060:intron 30.0%
GTCAAAAGTTAATCCAGTAA+AGG + chr4_4:45416125-45416144 None:intergenic 30.0%
! TGTTGATTGAAATTCTATGG+TGG - chr4_4:45416190-45416209 Msa0683060:intron 30.0%
AATCTTAATGTATTGTCCAG+AGG + chr4_4:45416244-45416263 None:intergenic 30.0%
TGTTTCAACCTAATCTTCAT+TGG - chr4_4:45416360-45416379 Msa0683060:intron 30.0%
CAAACGAAAGAAGAAAGATA+TGG + chr4_4:45416556-45416575 None:intergenic 30.0%
TGCAATCACAGGAAAATATT+TGG + chr4_4:45416772-45416791 None:intergenic 30.0%
AATAAATGGCAACTCACAAT+TGG + chr4_4:45416895-45416914 None:intergenic 30.0%
GTCTATAAATATTCTGACTG+CGG - chr4_4:45416928-45416947 Msa0683060:CDS 30.0%
! TTAATTCCGTCTTTTGTATG+CGG + chr4_4:45417029-45417048 None:intergenic 30.0%
TTTCAAACCAATAGGGAATA+GGG + chr4_4:45417275-45417294 None:intergenic 30.0%
ATTTCAAACCAATAGGGAAT+AGG + chr4_4:45417276-45417295 None:intergenic 30.0%
!! TTCCTGATATTGATTCCTAT+TGG - chr4_4:45417558-45417577 Msa0683060:intron 30.0%
AACCAATAGGAATCAATATC+AGG + chr4_4:45417563-45417582 None:intergenic 30.0%
!! TGATATTGATTCCTATTGGT+TGG - chr4_4:45417562-45417581 Msa0683060:intron 30.0%
CTATTTAACGACAAATGTGT+GGG + chr4_4:45417843-45417862 None:intergenic 30.0%
ACTATTTAACGACAAATGTG+TGG + chr4_4:45417844-45417863 None:intergenic 30.0%
GATCCTAAACTTAATTCCAA+AGG - chr4_4:45417881-45417900 Msa0683060:intron 30.0%
!! ACTCCTTTGGAATTAAGTTT+AGG + chr4_4:45417887-45417906 None:intergenic 30.0%
TTGAACCACTCATCTATAAA+TGG + chr4_4:45418123-45418142 None:intergenic 30.0%
AGGTAAAAAATCACAATGCA+GGG + chr4_4:45418276-45418295 None:intergenic 30.0%
AAGGTAAAAAATCACAATGC+AGG + chr4_4:45418277-45418296 None:intergenic 30.0%
!! GAATTTAATTGTTTCTGCAG+TGG - chr4_4:45418302-45418321 Msa0683060:intron 30.0%
!!! GCATAGTTTTTGAGACATAT+AGG + chr4_4:45418334-45418353 None:intergenic 30.0%
ATGTCTCAAAAACTATGCAT+TGG - chr4_4:45418336-45418355 Msa0683060:intron 30.0%
AAGTGATGCGATTGAAATAA+GGG + chr4_4:45418378-45418397 None:intergenic 30.0%
TCTTAATATATGACCAGAAG+AGG + chr4_4:45418768-45418787 None:intergenic 30.0%
TTCTGGTCATATATTAAGAG+AGG - chr4_4:45418769-45418788 Msa0683060:CDS 30.0%
! ATTGGAATAACAACTTGTTC+AGG + chr4_4:45418806-45418825 None:intergenic 30.0%
!! AATAATGTTGATTTAGCTCG+TGG - chr4_4:45418944-45418963 Msa0683060:intron 30.0%
TGAAGAAGACAATGACATAT+TGG - chr4_4:45419030-45419049 Msa0683060:intron 30.0%
! AACCATCTGCAATATCATTT+TGG + chr4_4:45419084-45419103 None:intergenic 30.0%
! AGAATTCAATCCATTTTGAG+TGG + chr4_4:45419626-45419645 None:intergenic 30.0%
CATTTATGAATTAGAAGGGT+CGG + chr4_4:45419713-45419732 None:intergenic 30.0%
TCACACACTAGTTATAACAA+AGG + chr4_4:45419760-45419779 None:intergenic 30.0%
TTATAACTAGTGTGTGAGTT+TGG - chr4_4:45419763-45419782 Msa0683060:intron 30.0%
!! TTAACAACAACAGGTTTTGT+TGG + chr4_4:45419834-45419853 None:intergenic 30.0%
CAGTAAGCGAATCATAAATA+GGG + chr4_4:45419886-45419905 None:intergenic 30.0%
CAATATGAAATCAATCTCGT+AGG - chr4_4:45420003-45420022 Msa0683060:intron 30.0%
! CGAAGATTTTTACTCTTTCA+TGG - chr4_4:45420034-45420053 Msa0683060:intron 30.0%
CATGACATTGGATGATTAAT+TGG - chr4_4:45420107-45420126 Msa0683060:CDS 30.0%
GGTTCAAAATAACAGATGAT+TGG - chr4_4:45420129-45420148 Msa0683060:intron 30.0%
CAAAATAACAGATGATTGGT+TGG - chr4_4:45420133-45420152 Msa0683060:intron 30.0%
AATAGCGAATCCAATCTATT+TGG - chr4_4:45420168-45420187 Msa0683060:intron 30.0%
AATGTCATCTGATGAATGAT+TGG - chr4_4:45420200-45420219 Msa0683060:intron 30.0%
ATGTCATCTGATGAATGATT+GGG - chr4_4:45420201-45420220 Msa0683060:intron 30.0%
!! AAAACTGATTTGCAGTGAAT+TGG + chr4_4:45420240-45420259 None:intergenic 30.0%
! AAACTGGTATTTTATGCACT+TGG + chr4_4:45420314-45420333 None:intergenic 30.0%
TTTAACGAACAGGTATAAAC+TGG + chr4_4:45420330-45420349 None:intergenic 30.0%
CATTGAAAATCTAATGTACG+CGG + chr4_4:45420423-45420442 None:intergenic 30.0%
AACAGTTATTGGAATTGGAT+CGG + chr4_4:45420545-45420564 None:intergenic 30.0%
! AGAAACTGTAGATTTTGTCT+TGG - chr4_4:45420741-45420760 Msa0683060:intron 30.0%
GGATACACATGTACATATAT+AGG + chr4_4:45420990-45421009 None:intergenic 30.0%
ATTATCTGATCAAGAACAAG+GGG + chr4_4:45421046-45421065 None:intergenic 30.0%
CAATTATCTGATCAAGAACA+AGG + chr4_4:45421048-45421067 None:intergenic 30.0%
! AATCAATAGAAAGGTACAAG+CGG + chr4_4:45421220-45421239 None:intergenic 30.0%
! CTTGTACCTTTCTATTGATT+CGG - chr4_4:45421220-45421239 Msa0683060:intron 30.0%
! GAACTTGTTTCAAGAACTTT+AGG - chr4_4:45421262-45421281 Msa0683060:intron 30.0%
TAGAAATTGAAAGAAGTTGG+AGG - chr4_4:45421310-45421329 Msa0683060:intron 30.0%
ATGCTTGATATTGAAGTTGA+CGG - chr4_4:45421461-45421480 Msa0683060:five_prime_UTR 30.0%
TATTCTTCAATTATCTACCG+AGG - chr4_4:45421508-45421527 Msa0683060:intron 30.0%
ATTCTTCAATTATCTACCGA+GGG - chr4_4:45421509-45421528 Msa0683060:intron 30.0%
GTTTAAACTTCCTAATTTGG+TGG - chr4_4:45421575-45421594 Msa0683060:intron 30.0%
! TTAAACTTCCTAATTTGGTG+GGG - chr4_4:45421577-45421596 Msa0683060:intron 30.0%
!! TATCCAATACGGTTAGTTTG+CGG + chr4_4:45411786-45411805 None:intergenic 35.0%
CTATCCACGATTATCCAATA+CGG + chr4_4:45411797-45411816 None:intergenic 35.0%
!!! GATTGCTTCTTCTGGTTTTT+TGG - chr4_4:45411821-45411840 Msa0683060:three_prime_UTR 35.0%
!!! TTCTTCTGGTTTTTTGGGTT+TGG - chr4_4:45411827-45411846 Msa0683060:three_prime_UTR 35.0%
!!! TCTTCTGGTTTTTTGGGTTT+GGG - chr4_4:45411828-45411847 Msa0683060:three_prime_UTR 35.0%
TGATTAGGGTTTGGAGATTA+GGG + chr4_4:45411954-45411973 None:intergenic 35.0%
CCTCCGATTCATTCTTATTA+CGG - chr4_4:45411974-45411993 Msa0683060:three_prime_UTR 35.0%
AGAAGCGAATAATCAACACA+TGG + chr4_4:45412110-45412129 None:intergenic 35.0%
!!! GAGTCTGTTGATTCAGTTTT+TGG - chr4_4:45412135-45412154 Msa0683060:three_prime_UTR 35.0%
! TGGTCAATTCTTAGGTTTTG+TGG - chr4_4:45412155-45412174 Msa0683060:three_prime_UTR 35.0%
!! AGGTTTTGTGGAAATGGATT+TGG - chr4_4:45412167-45412186 Msa0683060:three_prime_UTR 35.0%
TGAATTTATATGGACAGTGG+AGG - chr4_4:45412368-45412387 Msa0683060:CDS 35.0%
AATCTGTCAACAATCAATGC+GGG + chr4_4:45412706-45412725 None:intergenic 35.0%
CAATCTGTCAACAATCAATG+CGG + chr4_4:45412707-45412726 None:intergenic 35.0%
GCGTTTAAACAATAGAGAAG+AGG - chr4_4:45412778-45412797 Msa0683060:intron 35.0%
TTTGCAATAGTGCGCTAATT+TGG + chr4_4:45412855-45412874 None:intergenic 35.0%
TTAGCGCACTATTGCAAAAT+TGG - chr4_4:45412857-45412876 Msa0683060:intron 35.0%
TAGCGCACTATTGCAAAATT+GGG - chr4_4:45412858-45412877 Msa0683060:intron 35.0%
GTTTCCATGCCTAATAAAAC+TGG - chr4_4:45412933-45412952 Msa0683060:intron 35.0%
!!! ACTACCAGTTTTATTAGGCA+TGG + chr4_4:45412940-45412959 None:intergenic 35.0%
GGTTCGTCATTTCTATGAAT+TGG - chr4_4:45412973-45412992 Msa0683060:intron 35.0%
AATTCGTATGTACCAATTGG+AGG + chr4_4:45413032-45413051 None:intergenic 35.0%
TCCAATTGGTACATACGAAT+TGG - chr4_4:45413031-45413050 Msa0683060:intron 35.0%
ACCAATTCGTATGTACCAAT+TGG + chr4_4:45413035-45413054 None:intergenic 35.0%
CCAATACTTGCACAAAAACT+AGG + chr4_4:45413169-45413188 None:intergenic 35.0%
!! CCTAGTTTTTGTGCAAGTAT+TGG - chr4_4:45413166-45413185 Msa0683060:intron 35.0%
GAACGATGTGATTTCATAGT+TGG - chr4_4:45413198-45413217 Msa0683060:intron 35.0%
ATACTTCTGACCTCTCTTAT+AGG - chr4_4:45413427-45413446 Msa0683060:intron 35.0%
TTTCCGTATAAAAGAGCTCA+AGG - chr4_4:45413463-45413482 Msa0683060:intron 35.0%
! CATCCTTGAGCTCTTTTATA+CGG + chr4_4:45413469-45413488 None:intergenic 35.0%
TCAGTTAGGACTTTCAAAAC+AGG - chr4_4:45413496-45413515 Msa0683060:intron 35.0%
CAGTTAGGACTTTCAAAACA+GGG - chr4_4:45413497-45413516 Msa0683060:intron 35.0%
! ATATGACGTCTTGGAGTTTT+TGG - chr4_4:45413676-45413695 Msa0683060:intron 35.0%
! AAGCATAGCAGAGAAGTATA+AGG + chr4_4:45413821-45413840 None:intergenic 35.0%
! TTCTCTGCTATGCTTTTACT+GGG - chr4_4:45413826-45413845 Msa0683060:intron 35.0%
GTTTCAACAATACCTGCATA+TGG - chr4_4:45413878-45413897 Msa0683060:intron 35.0%
ACATCTACATTTCCATATGC+AGG + chr4_4:45413893-45413912 None:intergenic 35.0%
GAATTAACTACTCAACAAGG+AGG + chr4_4:45414095-45414114 None:intergenic 35.0%
ATTTACATATGCGAGAGAAG+GGG + chr4_4:45414171-45414190 None:intergenic 35.0%
GATTTACATATGCGAGAGAA+GGG + chr4_4:45414172-45414191 None:intergenic 35.0%
AGATTTACATATGCGAGAGA+AGG + chr4_4:45414173-45414192 None:intergenic 35.0%
TGAAATGAATGTCTACTTCG+TGG - chr4_4:45414215-45414234 Msa0683060:CDS 35.0%
GAAATGAATGTCTACTTCGT+GGG - chr4_4:45414216-45414235 Msa0683060:CDS 35.0%
GTTTACATGAGAAAGGATGA+AGG + chr4_4:45414324-45414343 None:intergenic 35.0%
GAAACTGAGACAAAAGCAAA+AGG + chr4_4:45414354-45414373 None:intergenic 35.0%
TTGTCTCAGTTTCCAGAATA+TGG - chr4_4:45414361-45414380 Msa0683060:CDS 35.0%
TGTCTCAGTTTCCAGAATAT+GGG - chr4_4:45414362-45414381 Msa0683060:CDS 35.0%
! AATTGGTGGATGACACATAT+AGG - chr4_4:45414421-45414440 Msa0683060:CDS 35.0%
TATTCTATAACCCATTCCCT+TGG - chr4_4:45414606-45414625 Msa0683060:CDS 35.0%
ATAAGAAATAGGAAGGCCAA+GGG + chr4_4:45414625-45414644 None:intergenic 35.0%
AATAAGAAATAGGAAGGCCA+AGG + chr4_4:45414626-45414645 None:intergenic 35.0%
! TTGGCCTTCCTATTTCTTAT+TGG - chr4_4:45414625-45414644 Msa0683060:CDS 35.0%
ACTCAGGAAAATGCAGATAT+CGG - chr4_4:45414668-45414687 Msa0683060:CDS 35.0%
GTCAGATAGTAGTAATGTGA+AGG - chr4_4:45414725-45414744 Msa0683060:CDS 35.0%
! CAGTGGGGCATATAATTTTA+TGG + chr4_4:45414888-45414907 None:intergenic 35.0%
GAAATATTGCATGTACAGTG+GGG + chr4_4:45414903-45414922 None:intergenic 35.0%
TTATCAAATGTGCAACATGC+AGG + chr4_4:45415002-45415021 None:intergenic 35.0%
AAGAAAGGGAACATGACATA+CGG + chr4_4:45415188-45415207 None:intergenic 35.0%
AAATTTGCCCTAATCCATGA+AGG + chr4_4:45415221-45415240 None:intergenic 35.0%
!!! ACTGAAACTGTTTTAGTGTG+AGG - chr4_4:45415271-45415290 Msa0683060:intron 35.0%
!!! TTGTGACCCATTTTTAGTTG+TGG - chr4_4:45415460-45415479 Msa0683060:intron 35.0%
CCAACTCCACAACTAAAAAT+GGG + chr4_4:45415469-45415488 None:intergenic 35.0%
ACCAACTCCACAACTAAAAA+TGG + chr4_4:45415470-45415489 None:intergenic 35.0%
TCCTTTGTTACCTGTAAAGT+TGG - chr4_4:45415902-45415921 Msa0683060:intron 35.0%
!! AATACTACATTTTGGGGGTT+GGG - chr4_4:45416062-45416081 Msa0683060:intron 35.0%
GTTAGTGCAAATTCCTTTAC+TGG - chr4_4:45416109-45416128 Msa0683060:intron 35.0%
!!! TTTTGAGGTAGAATTACCTC+TGG - chr4_4:45416225-45416244 Msa0683060:intron 35.0%
AGCAGATAATTATTCGCACA+CGG + chr4_4:45416335-45416354 None:intergenic 35.0%
!! CTTCATTGGAGTATTTTGCT+TGG - chr4_4:45416374-45416393 Msa0683060:intron 35.0%
!! ATTGGAGTATTTTGCTTGGT+TGG - chr4_4:45416378-45416397 Msa0683060:intron 35.0%
! TGGTACTGAACAATTCAAAC+AGG + chr4_4:45416417-45416436 None:intergenic 35.0%
CAAGAATTTGATGTTGAGGT+TGG - chr4_4:45416502-45416521 Msa0683060:CDS 35.0%
! ATTTGATGTTGAGGTTGGTT+TGG - chr4_4:45416507-45416526 Msa0683060:CDS 35.0%
! TTTGGATTTTCAGTGCTTGT+AGG - chr4_4:45416525-45416544 Msa0683060:CDS 35.0%
TATACAGACCTAGCAGTTAA+TGG - chr4_4:45416654-45416673 Msa0683060:intron 35.0%
!! TGAAAGTACCATTAACTGCT+AGG + chr4_4:45416665-45416684 None:intergenic 35.0%
GGTCTATTAGTTGTTCGAAT+AGG + chr4_4:45416832-45416851 None:intergenic 35.0%
ATTCGAACAACTAATAGACC+TGG - chr4_4:45416832-45416851 Msa0683060:intron 35.0%
! ATGCTCGCATTTTCTGTTTA+GGG - chr4_4:45417072-45417091 Msa0683060:CDS 35.0%
ACTTATTGTTCAGTACCACA+AGG + chr4_4:45417199-45417218 None:intergenic 35.0%
TATTGATCCCTATTCCCTAT+TGG - chr4_4:45417265-45417284 Msa0683060:intron 35.0%
TTTAGTAGAAGCAACACTTG+AGG + chr4_4:45417386-45417405 None:intergenic 35.0%
TTTCAGACTGACATTGTACA+GGG + chr4_4:45417538-45417557 None:intergenic 35.0%
ATTTCAGACTGACATTGTAC+AGG + chr4_4:45417539-45417558 None:intergenic 35.0%
TTAATTCCAAAGGAGTCTGA+CGG - chr4_4:45417891-45417910 Msa0683060:intron 35.0%
AGAAACGAAAAAAGCCTTAC+CGG + chr4_4:45418044-45418063 None:intergenic 35.0%
AATGCAAGGTTTGAATCTTC+CGG + chr4_4:45418158-45418177 None:intergenic 35.0%
ATTCAAACCTTGCATTCACA+TGG - chr4_4:45418162-45418181 Msa0683060:intron 35.0%
TTCAAACCTTGCATTCACAT+GGG - chr4_4:45418163-45418182 Msa0683060:intron 35.0%
AATGAATCAACGGTCAAGAA+AGG - chr4_4:45418213-45418232 Msa0683060:intron 35.0%
GGTAAAAAATCACAATGCAG+GGG + chr4_4:45418275-45418294 None:intergenic 35.0%
GAAGTGATGCGATTGAAATA+AGG + chr4_4:45418379-45418398 None:intergenic 35.0%
TTTCAATCGCATCACTTCTA+TGG - chr4_4:45418381-45418400 Msa0683060:intron 35.0%
CTGGTACAGATGATTAATTG+CGG - chr4_4:45418470-45418489 Msa0683060:CDS 35.0%
AAAGTGAACGTCTGGATTTA+GGG - chr4_4:45418555-45418574 Msa0683060:intron 35.0%
AACACTGAAGCAAGTAAAAC+AGG - chr4_4:45418649-45418668 Msa0683060:intron 35.0%
!! AAACAGGAAGGTTTTTCAGA+TGG - chr4_4:45418665-45418684 Msa0683060:intron 35.0%
! CTGGTTTAAAACTTGGCATT+AGG - chr4_4:45418693-45418712 Msa0683060:intron 35.0%
! GTTTAAAACTTGGCATTAGG+AGG - chr4_4:45418696-45418715 Msa0683060:intron 35.0%
TACTACCAATGGAATTGAGA+TGG - chr4_4:45418907-45418926 Msa0683060:intron 35.0%
AGAATCCATCTCAATTCCAT+TGG + chr4_4:45418915-45418934 None:intergenic 35.0%
!! TGGTTGTTATTTGCAATTGG+AGG + chr4_4:45419061-45419080 None:intergenic 35.0%
!! TGGTGGTTGTTATTTGCAAT+TGG + chr4_4:45419064-45419083 None:intergenic 35.0%
! CATCTGCAATATCATTTTGG+TGG + chr4_4:45419081-45419100 None:intergenic 35.0%
CACCAAAATGATATTGCAGA+TGG - chr4_4:45419079-45419098 Msa0683060:intron 35.0%
GATTCTGATCTTCAGTGTAT+GGG + chr4_4:45419135-45419154 None:intergenic 35.0%
AGATTCTGATCTTCAGTGTA+TGG + chr4_4:45419136-45419155 None:intergenic 35.0%
TACACTGAAGATCAGAATCT+CGG - chr4_4:45419136-45419155 Msa0683060:CDS 35.0%
!!! ATTTTGGAATATCTTCCCTG+TGG - chr4_4:45419197-45419216 Msa0683060:intron 35.0%
AGTGATGAGGTGCAATTAAT+AGG + chr4_4:45419316-45419335 None:intergenic 35.0%
GATCAAGCAAATGTCTCTAA+TGG - chr4_4:45419532-45419551 Msa0683060:intron 35.0%
CAAAGGACTAAAAATGCAAG+CGG + chr4_4:45419743-45419762 None:intergenic 35.0%
AGTTTGGTCCTTCAATTAGA+AGG - chr4_4:45419779-45419798 Msa0683060:intron 35.0%
GTTTGGTCCTTCAATTAGAA+GGG - chr4_4:45419780-45419799 Msa0683060:intron 35.0%
TTTGGTCCTTCAATTAGAAG+GGG - chr4_4:45419781-45419800 Msa0683060:intron 35.0%
CATAATCCCCTTCTAATTGA+AGG + chr4_4:45419790-45419809 None:intergenic 35.0%
CCAGTAAGCGAATCATAAAT+AGG + chr4_4:45419887-45419906 None:intergenic 35.0%
CCTATTTATGATTCGCTTAC+TGG - chr4_4:45419884-45419903 Msa0683060:intron 35.0%
! TAACAGATGATTGGTTGGAT+TGG - chr4_4:45420138-45420157 Msa0683060:intron 35.0%
! AACAGATGATTGGTTGGATT+GGG - chr4_4:45420139-45420158 Msa0683060:intron 35.0%
! TGGTATTTTATGCACTTGGA+TGG + chr4_4:45420310-45420329 None:intergenic 35.0%
AAGGTAGCAATTTAACGAAC+AGG + chr4_4:45420340-45420359 None:intergenic 35.0%
! CGCGTACATTAGATTTTCAA+TGG - chr4_4:45420421-45420440 Msa0683060:intron 35.0%
!! TTGCAACTTGGTGCTATAAA+AGG + chr4_4:45420480-45420499 None:intergenic 35.0%
CCAGAAACAGTTATTGGAAT+TGG + chr4_4:45420550-45420569 None:intergenic 35.0%
CCAATTCCAATAACTGTTTC+TGG - chr4_4:45420547-45420566 Msa0683060:intron 35.0%
CCTAAACCAGAAACAGTTAT+TGG + chr4_4:45420556-45420575 None:intergenic 35.0%
!! CCAATAACTGTTTCTGGTTT+AGG - chr4_4:45420553-45420572 Msa0683060:intron 35.0%
!! TGGTTTAGGTCGTTTTATTG+TGG - chr4_4:45420567-45420586 Msa0683060:intron 35.0%
TTGTGGAAAGTTCGTATTCT+CGG - chr4_4:45420584-45420603 Msa0683060:intron 35.0%
!! GTATTCTCGGAATTTTGAAG+AGG - chr4_4:45420597-45420616 Msa0683060:intron 35.0%
! AAAAGGTGTAAGAAAGTTGC+CGG - chr4_4:45420680-45420699 Msa0683060:intron 35.0%
! ATTGAGCACTGCTATTCAAA+TGG - chr4_4:45420712-45420731 Msa0683060:intron 35.0%
! CTCACCTTTTGCATTGTTTA+TGG - chr4_4:45421018-45421037 Msa0683060:intron 35.0%
GGAACCATAAACAATGCAAA+AGG + chr4_4:45421025-45421044 None:intergenic 35.0%
! ATCAATAGAAAGGTACAAGC+GGG + chr4_4:45421219-45421238 None:intergenic 35.0%
!! CCTTTCTATTGATTCGGAAT+CGG - chr4_4:45421226-45421245 Msa0683060:intron 35.0%
!! TTGATTCGGAATCGGAATAA+AGG - chr4_4:45421234-45421253 Msa0683060:intron 35.0%
!!! AAAGAAGTTGGAGGCATTTT+TGG - chr4_4:45421319-45421338 Msa0683060:intron 35.0%
CTCTGGTGGAAGATATAAAT+TGG - chr4_4:45421374-45421393 Msa0683060:CDS 35.0%
CAATATCATTTGCCAAAGAG+GGG + chr4_4:45421418-45421437 None:intergenic 35.0%
CCAATATCATTTGCCAAAGA+GGG + chr4_4:45421419-45421438 None:intergenic 35.0%
TGGAGAAACAAGAATCTTTG+CGG + chr4_4:45421442-45421461 None:intergenic 35.0%
GTCAACTTCAATATCAAGCA+TGG + chr4_4:45421462-45421481 None:intergenic 35.0%
TGCTTGATATTGAAGTTGAC+GGG - chr4_4:45421462-45421481 Msa0683060:five_prime_UTR 35.0%
!!! TGCTGGTTTTACTGTATAGT+TGG - chr4_4:45421537-45421556 Msa0683060:intron 35.0%
GTATAGTTGGTCATTCAATC+TGG - chr4_4:45421550-45421569 Msa0683060:intron 35.0%
! GAAATTTTCCCCACCAAATT+AGG + chr4_4:45421588-45421607 None:intergenic 35.0%
! ACCTGTAAATGTTTAGCCTT+CGG - chr4_4:45421659-45421678 Msa0683060:five_prime_UTR 35.0%
AATTCTCTTGTTGAATCCGA+AGG + chr4_4:45421678-45421697 None:intergenic 35.0%
! TCAATTCTAGACGCACTTTT+GGG + chr4_4:45421793-45421812 None:intergenic 35.0%
! TTCAATTCTAGACGCACTTT+TGG + chr4_4:45421794-45421813 None:intergenic 35.0%
CTAACCGTATTGGATAATCG+TGG - chr4_4:45411790-45411809 Msa0683060:three_prime_UTR 40.0%
CGTATTGGATAATCGTGGAT+AGG - chr4_4:45411795-45411814 Msa0683060:three_prime_UTR 40.0%
!!! TGGTTTTTTGGGTTTGGGTT+TGG - chr4_4:45411833-45411852 Msa0683060:three_prime_UTR 40.0%
GTGATTAGGGTTTGGAGATT+AGG + chr4_4:45411955-45411974 None:intergenic 40.0%
GAATGAATCGGAGGTGATTA+GGG + chr4_4:45411968-45411987 None:intergenic 40.0%
AGAATGAATCGGAGGTGATT+AGG + chr4_4:45411969-45411988 None:intergenic 40.0%
CCGTAATAAGAATGAATCGG+AGG + chr4_4:45411977-45411996 None:intergenic 40.0%
! GATCAGATTGGTTACTACTG+CGG - chr4_4:45412079-45412098 Msa0683060:three_prime_UTR 40.0%
ATTTATATGGACAGTGGAGG+AGG - chr4_4:45412371-45412390 Msa0683060:CDS 40.0%
!!! GGAGGAGGAGGTTTTTTTAA+TGG - chr4_4:45412386-45412405 Msa0683060:CDS 40.0%
! TTGCAATTCGCTTTGCTATG+TGG - chr4_4:45412486-45412505 Msa0683060:intron 40.0%
! ATTCGCTTTGCTATGTGGTA+CGG - chr4_4:45412491-45412510 Msa0683060:intron 40.0%
TGTTTAAACGCTTCCGATGA+GGG + chr4_4:45412769-45412788 None:intergenic 40.0%
TTGTTTAAACGCTTCCGATG+AGG + chr4_4:45412770-45412789 None:intergenic 40.0%
TCACACAGTTCATTGTACCA+TGG - chr4_4:45412826-45412845 Msa0683060:intron 40.0%
CTATTGCAAAATTGGGTGTG+CGG - chr4_4:45412865-45412884 Msa0683060:intron 40.0%
TATTGCAAAATTGGGTGTGC+GGG - chr4_4:45412866-45412885 Msa0683060:intron 40.0%
GGAAACAACCGTAGTAAAAC+TGG + chr4_4:45412919-45412938 None:intergenic 40.0%
TTCAAAACAGGGAAAGAAGC+AGG - chr4_4:45413508-45413527 Msa0683060:intron 40.0%
ATCCTACAGAAGACAAAGCA+CGG + chr4_4:45413717-45413736 None:intergenic 40.0%
! CTTCTCTGCTATGCTTTTAC+TGG - chr4_4:45413825-45413844 Msa0683060:intron 40.0%
! TCTCTGCTATGCTTTTACTG+GGG - chr4_4:45413827-45413846 Msa0683060:intron 40.0%
TTAGATGGAATCTTAGGCCA+AGG - chr4_4:45414023-45414042 Msa0683060:CDS 40.0%
CTAGCTGTTTGCTTTCATAC+AGG - chr4_4:45414114-45414133 Msa0683060:CDS 40.0%
TTTACATATGCGAGAGAAGG+GGG + chr4_4:45414170-45414189 None:intergenic 40.0%
AGAAAGGATGAAGGAACACA+AGG + chr4_4:45414315-45414334 None:intergenic 40.0%
ATTCTTCTTGGCCCATATTC+TGG + chr4_4:45414376-45414395 None:intergenic 40.0%
TTTCCCAACAGCATTCTTCT+TGG + chr4_4:45414388-45414407 None:intergenic 40.0%
TGATGTGGTACTATGCCATT+AGG - chr4_4:45414553-45414572 Msa0683060:CDS 40.0%
CTCAGGAAAATGCAGATATC+GGG - chr4_4:45414669-45414688 Msa0683060:CDS 40.0%
! TGTGGAAGTACATTGGAAAC+AGG - chr4_4:45414813-45414832 Msa0683060:CDS 40.0%
! GTGGAAGTACATTGGAAACA+GGG - chr4_4:45414814-45414833 Msa0683060:CDS 40.0%
! TGGAAGTACATTGGAAACAG+GGG - chr4_4:45414815-45414834 Msa0683060:CDS 40.0%
ATTCCAGAGAAACCTATGGA+AGG - chr4_4:45415104-45415123 Msa0683060:intron 40.0%
AGAAAGGGAACATGACATAC+GGG + chr4_4:45415187-45415206 None:intergenic 40.0%
!!! CCCATTTTTAGTTGTGGAGT+TGG - chr4_4:45415466-45415485 Msa0683060:intron 40.0%
TTGTATTCTTGGGGCCTATT+TGG - chr4_4:45415646-45415665 Msa0683060:CDS 40.0%
TTGAAAGCCGCAAACCAAAT+AGG + chr4_4:45415663-45415682 None:intergenic 40.0%
GCCAACTTTACAGGTAACAA+AGG + chr4_4:45415906-45415925 None:intergenic 40.0%
!! GAATACTACATTTTGGGGGT+TGG - chr4_4:45416061-45416080 Msa0683060:intron 40.0%
CGGTCATTTGATTGTGTCTT+TGG + chr4_4:45416315-45416334 None:intergenic 40.0%
CGAAAAATTACGTGTAGGCT+TGG - chr4_4:45416583-45416602 Msa0683060:intron 40.0%
AGGTTCCATTCAGGATTCAA+TGG - chr4_4:45416625-45416644 Msa0683060:intron 40.0%
! GATGCTCGCATTTTCTGTTT+AGG - chr4_4:45417071-45417090 Msa0683060:CDS 40.0%
! TGCTCGCATTTTCTGTTTAG+GGG - chr4_4:45417073-45417092 Msa0683060:CDS 40.0%
ATTGTTCAGTACCACAAGGA+GGG + chr4_4:45417195-45417214 None:intergenic 40.0%
TATTGTTCAGTACCACAAGG+AGG + chr4_4:45417196-45417215 None:intergenic 40.0%
TTTCAGACTGACACTGTACA+GGG + chr4_4:45417238-45417257 None:intergenic 40.0%
ATTTCAGACTGACACTGTAC+AGG + chr4_4:45417239-45417258 None:intergenic 40.0%
AGGGAATAGGGATCAATATC+AGG + chr4_4:45417263-45417282 None:intergenic 40.0%
TTTGAATAACACCCGACTGT+CGG - chr4_4:45417649-45417668 Msa0683060:CDS 40.0%
TAGAGTAGAAGCAACACTTG+AGG + chr4_4:45417695-45417714 None:intergenic 40.0%
AAATGTGTGGGAGTAATGCA+CGG + chr4_4:45417831-45417850 None:intergenic 40.0%
GGTTCAAGAATGAAGATTGC+CGG - chr4_4:45418136-45418155 Msa0683060:intron 40.0%
AAACAACCCATGTGAATGCA+AGG + chr4_4:45418172-45418191 None:intergenic 40.0%
TGAAGATGTTACAGAGGTTG+AGG - chr4_4:45418493-45418512 Msa0683060:CDS 40.0%
AAAGAGTGAAAGTGAACGTC+TGG - chr4_4:45418547-45418566 Msa0683060:intron 40.0%
GAAAGTGAACGTCTGGATTT+AGG - chr4_4:45418554-45418573 Msa0683060:intron 40.0%
ATTTAGGGATTCTTGGCCAA+TGG - chr4_4:45418570-45418589 Msa0683060:intron 40.0%
ATCCATTAGGAAGATGCCAT+TGG + chr4_4:45418589-45418608 None:intergenic 40.0%
GAAGTACAAAGGGATCCATT+AGG + chr4_4:45418602-45418621 None:intergenic 40.0%
! TCCAGCAGTAGAAGTACAAA+GGG + chr4_4:45418612-45418631 None:intergenic 40.0%
CTGAAGCAAGTAAAACAGGA+AGG - chr4_4:45418653-45418672 Msa0683060:intron 40.0%
!!! ATGCCAAGTTTTAAACCAGC+AGG + chr4_4:45418692-45418711 None:intergenic 40.0%
!! AGAAGAGGTGTTTGTTGTCT+CGG + chr4_4:45418753-45418772 None:intergenic 40.0%
CAAATGAACCAATGCATCAG+AGG + chr4_4:45419284-45419303 None:intergenic 40.0%
AATTGCACCTCATCACTGAA+CGG - chr4_4:45419319-45419338 Msa0683060:intron 40.0%
ATCACTGAACGGTTATGCAT+TGG - chr4_4:45419330-45419349 Msa0683060:intron 40.0%
! GGGAGAAAAATCTGAAGTGA+GGG + chr4_4:45419472-45419491 None:intergenic 40.0%
ATGGTGTTTCCACTGAAGAT+TGG - chr4_4:45419551-45419570 Msa0683060:intron 40.0%
AGACAATGGCGCAAATACTT+TGG - chr4_4:45419666-45419685 Msa0683060:intron 40.0%
! GCAAATACTTTGGCTGATTC+TGG - chr4_4:45419676-45419695 Msa0683060:intron 40.0%
!!! AACAACAGGTTTTGTTGGCA+TGG + chr4_4:45419829-45419848 None:intergenic 40.0%
TTTCATGGGGCCATCAATTA+GGG - chr4_4:45420049-45420068 Msa0683060:CDS 40.0%
CTGTGAGATGATCTTGTGAA+AGG + chr4_4:45420453-45420472 None:intergenic 40.0%
! AAAGGTGTAAGAAAGTTGCC+GGG - chr4_4:45420681-45420700 Msa0683060:intron 40.0%
AGTGCTCAATACAAGAAACC+CGG + chr4_4:45420702-45420721 None:intergenic 40.0%
GAAGACTAAACACAGCAACA+TGG + chr4_4:45420787-45420806 None:intergenic 40.0%
GCACTAAGATTCATATGGTG+AGG + chr4_4:45420809-45420828 None:intergenic 40.0%
TGCTCGCACTAAGATTCATA+TGG + chr4_4:45420814-45420833 None:intergenic 40.0%
AGAAGCTGCACAAGAAGATA+TGG + chr4_4:45421099-45421118 None:intergenic 40.0%
! TTTTGGCGAGGAAATGTGAA+AGG + chr4_4:45421182-45421201 None:intergenic 40.0%
! TCAATAGAAAGGTACAAGCG+GGG + chr4_4:45421218-45421237 None:intergenic 40.0%
CCGATTCCGAATCAATAGAA+AGG + chr4_4:45421229-45421248 None:intergenic 40.0%
!!! CATTTTTGGTCCTCATAACG+TGG - chr4_4:45421333-45421352 Msa0683060:intron 40.0%
ATACATACTGCCACGTTATG+AGG + chr4_4:45421346-45421365 None:intergenic 40.0%
TAACGTGGCAGTATGTATTG+AGG - chr4_4:45421348-45421367 Msa0683060:intron 40.0%
! AGTATGTATTGAGGCATCTC+TGG - chr4_4:45421357-45421376 Msa0683060:intron 40.0%
CCCTCTTTGGCAAATGATAT+TGG - chr4_4:45421416-45421435 Msa0683060:five_prime_UTR 40.0%
GCCAATATCATTTGCCAAAG+AGG + chr4_4:45421420-45421439 None:intergenic 40.0%
!! ATATTGAAGTTGACGGGTTG+TGG - chr4_4:45421468-45421487 Msa0683060:five_prime_UTR 40.0%
TAAAACCAGCACTATACCCT+CGG + chr4_4:45421528-45421547 None:intergenic 40.0%
TCCGAAGGCTAAACATTTAC+AGG + chr4_4:45421663-45421682 None:intergenic 40.0%
!! CTTGTGCCCATTTTTACATC+TGG - chr4_4:45421737-45421756 Msa0683060:five_prime_UTR 40.0%
AACACGTCCGGGTTAAGTTT+CGG + chr4_4:45411762-45411781 None:intergenic 45.0%
TTGCCGCAAACTAACCGTAT+TGG - chr4_4:45411780-45411799 Msa0683060:three_prime_UTR 45.0%
ATAGGTCCGATTGCTTCTTC+TGG - chr4_4:45411813-45411832 Msa0683060:three_prime_UTR 45.0%
TTGTTGAAATCACGCACACG+CGG + chr4_4:45411930-45411949 None:intergenic 45.0%
AATCGGAGGTGATTAGGGTT+TGG + chr4_4:45411963-45411982 None:intergenic 45.0%
! GTGGAAATGGATTTGGTAGC+CGG - chr4_4:45412174-45412193 Msa0683060:three_prime_UTR 45.0%
ATGCCTTCGATCAGTAGTGT+CGG - chr4_4:45412311-45412330 Msa0683060:exon 45.0%
! TTCGCTTTGCTATGTGGTAC+GGG - chr4_4:45412492-45412511 Msa0683060:intron 45.0%
! TGGTTCACTGTTTAGGTTCG+TGG - chr4_4:45412545-45412564 Msa0683060:intron 45.0%
GGGTTCCCATGTCTAGTTAA+TGG - chr4_4:45412886-45412905 Msa0683060:intron 45.0%
!! GAATTGGTTCGCAGTTCTCA+TGG - chr4_4:45413047-45413066 Msa0683060:intron 45.0%
!! AAGGATGTGCTGACTCAGTT+AGG - chr4_4:45413482-45413501 Msa0683060:intron 45.0%
TCCTACAGAAGACAAAGCAC+GGG + chr4_4:45413716-45413735 None:intergenic 45.0%
TTCTGTAGGATCTCGTCGAT+CGG - chr4_4:45413726-45413745 Msa0683060:intron 45.0%
TCCATACTCTCAGATGAGCA+AGG - chr4_4:45413755-45413774 Msa0683060:intron 45.0%
ACCTTGCTCATCTGAGAGTA+TGG + chr4_4:45413759-45413778 None:intergenic 45.0%
AACAAGGAGGGTTTACCGTT+GGG + chr4_4:45414082-45414101 None:intergenic 45.0%
AGGGGGAAATGGATCAAACT+TGG + chr4_4:45414153-45414172 None:intergenic 45.0%
GAAAGAGCAGGTGGCAAAAT+TGG - chr4_4:45414404-45414423 Msa0683060:CDS 45.0%
CAGCATCAACAATAGCTGCT+AGG + chr4_4:45414459-45414478 None:intergenic 45.0%
TATGCCATTAGGCCTGGTTT+GGG - chr4_4:45414564-45414583 Msa0683060:CDS 45.0%
AATAGGAAGGCCAAGGGAAT+GGG + chr4_4:45414619-45414638 None:intergenic 45.0%
AAATAGGAAGGCCAAGGGAA+TGG + chr4_4:45414620-45414639 None:intergenic 45.0%
AGCCACTGATCTAGCATCAA+AGG - chr4_4:45414692-45414711 Msa0683060:CDS 45.0%
GCCACTGATCTAGCATCAAA+GGG - chr4_4:45414693-45414712 Msa0683060:CDS 45.0%
ACCCTTTGATGCTAGATCAG+TGG + chr4_4:45414697-45414716 None:intergenic 45.0%
TGATCTAGCATCAAAGGGTC+AGG - chr4_4:45414698-45414717 Msa0683060:CDS 45.0%
ACAAAGATTCGCTGTCTCTG+TGG - chr4_4:45414795-45414814 Msa0683060:CDS 45.0%
! CTGTCTCTGTGGAAGTACAT+TGG - chr4_4:45414806-45414825 Msa0683060:CDS 45.0%
GGAAACAGGGGATTTGATCA+AGG - chr4_4:45414827-45414846 Msa0683060:CDS 45.0%
TCAAATGTGCAACATGCAGG+AGG + chr4_4:45414999-45415018 None:intergenic 45.0%
ATGATGCAAGATGCCAAGTG+TGG - chr4_4:45415060-45415079 Msa0683060:CDS 45.0%
AACTGATGTGTTGCCACACT+TGG + chr4_4:45415076-45415095 None:intergenic 45.0%
ATGCCTTCCATAGGTTTCTC+TGG + chr4_4:45415110-45415129 None:intergenic 45.0%
TGTGAGGCTGTTATCGTTGA+AGG - chr4_4:45415287-45415306 Msa0683060:intron 45.0%
! TCTCAGTTGGTGTAGTGAAC+TGG - chr4_4:45415363-45415382 Msa0683060:CDS 45.0%
! ATCAGTCGGAATACTGGTTG+TGG + chr4_4:45415928-45415947 None:intergenic 45.0%
ACAACCAGTATTCCGACTGA+TGG - chr4_4:45415927-45415946 Msa0683060:intron 45.0%
CAACCAGTATTCCGACTGAT+GGG - chr4_4:45415928-45415947 Msa0683060:intron 45.0%
CTACTCTGCAGAGACTGTAA+TGG - chr4_4:45416144-45416163 Msa0683060:intron 45.0%
TCAACTCACAAGAGCAGACA+AGG - chr4_4:45416465-45416484 Msa0683060:CDS 45.0%
GTGTATGCTTCTGAACGACA+AGG - chr4_4:45416605-45416624 Msa0683060:intron 45.0%
TGAACGACAAGGTTCCATTC+AGG - chr4_4:45416616-45416635 Msa0683060:intron 45.0%
TGTGGCCATTGAATCCTGAA+TGG + chr4_4:45416633-45416652 None:intergenic 45.0%
ACTGCTAGGTCTGTATACTG+TGG + chr4_4:45416651-45416670 None:intergenic 45.0%
TCTCAGTTGCTTGGAGCTAA+CGG - chr4_4:45416856-45416875 Msa0683060:intron 45.0%
TATGCGGCGTGATCTGAAAA+AGG + chr4_4:45417013-45417032 None:intergenic 45.0%
ATCACGCCGCATACAAAAGA+CGG - chr4_4:45417020-45417039 Msa0683060:intron 45.0%
GCGAGCATCACATACTGTTA+AGG + chr4_4:45417060-45417079 None:intergenic 45.0%
TAGGGGTTCGAATTGTCAGA+AGG - chr4_4:45417090-45417109 Msa0683060:CDS 45.0%
ATTCCTTTAGTCCCTCCTTG+TGG - chr4_4:45417181-45417200 Msa0683060:intron 45.0%
!! CGTGCAAGAGCATCTTCAAA+AGG + chr4_4:45417921-45417940 None:intergenic 45.0%
! TGCTGATAGCGACAGTGATT+TGG - chr4_4:45417980-45417999 Msa0683060:intron 45.0%
! TAGCGACAGTGATTTGGAAG+TGG - chr4_4:45417986-45418005 Msa0683060:intron 45.0%
CAGTATAAGCCTTCGTTGTC+CGG - chr4_4:45418022-45418041 Msa0683060:intron 45.0%
TTGCGGTGAAGATGTTACAG+AGG - chr4_4:45418487-45418506 Msa0683060:CDS 45.0%
CGTCTGGATTTAGGGATTCT+TGG - chr4_4:45418563-45418582 Msa0683060:intron 45.0%
TCCCTTTGTACTTCTACTGC+TGG - chr4_4:45418608-45418627 Msa0683060:intron 45.0%
! CTCCAGCAGTAGAAGTACAA+AGG + chr4_4:45418613-45418632 None:intergenic 45.0%
!! GGACCTGCTGGTTTAAAACT+TGG - chr4_4:45418686-45418705 Msa0683060:intron 45.0%
GCATTAGGAGGAATCGCAAT+GGG - chr4_4:45418708-45418727 Msa0683060:intron 45.0%
GAGGAATCGCAATGGGAATT+GGG - chr4_4:45418715-45418734 Msa0683060:intron 45.0%
!! GAAGAGGTGTTTGTTGTCTC+GGG + chr4_4:45418752-45418771 None:intergenic 45.0%
GAGACAACAAACACCTCTTC+TGG - chr4_4:45418752-45418771 Msa0683060:CDS 45.0%
GTTATTCCAATGAGCAGCAG+TGG - chr4_4:45418815-45418834 Msa0683060:CDS 45.0%
TGATGATCCCAGTGTTAACC+AGG - chr4_4:45418859-45418878 Msa0683060:CDS 45.0%
GATGATCCCAGTGTTAACCA+GGG - chr4_4:45418860-45418879 Msa0683060:CDS 45.0%
TACGCATAACACATCTGCTC+AGG - chr4_4:45418973-45418992 Msa0683060:intron 45.0%
CATAACACATCTGCTCAGGT+GGG - chr4_4:45418977-45418996 Msa0683060:intron 45.0%
TATGGGTCAACAATTCCAGG+AGG + chr4_4:45419118-45419137 None:intergenic 45.0%
GTGTATGGGTCAACAATTCC+AGG + chr4_4:45419121-45419140 None:intergenic 45.0%
ACTGAAGATCAGAATCTCGG+TGG - chr4_4:45419139-45419158 Msa0683060:CDS 45.0%
GGTCCAGGATTCCAATTGTT+CGG - chr4_4:45419244-45419263 Msa0683060:intron 45.0%
GAACCGAACAATTGGAATCC+TGG + chr4_4:45419250-45419269 None:intergenic 45.0%
CTGCATCAGAACCGAACAAT+TGG + chr4_4:45419258-45419277 None:intergenic 45.0%
! ATTGTTCGGTTCTGATGCAG+AGG - chr4_4:45419258-45419277 Msa0683060:intron 45.0%
TGCATAACCGTTCAGTGATG+AGG + chr4_4:45419329-45419348 None:intergenic 45.0%
CTCTTACAAGATTCCTCTGC+TGG - chr4_4:45419382-45419401 Msa0683060:intron 45.0%
TACAAGATTCCTCTGCTGGA+CGG - chr4_4:45419386-45419405 Msa0683060:intron 45.0%
!! CGGACAGATGCTGACTTAAA+CGG - chr4_4:45419406-45419425 Msa0683060:intron 45.0%
!! ACAGATGCTGACTTAAACGG+TGG - chr4_4:45419409-45419428 Msa0683060:intron 45.0%
!! TGCTGACTTAAACGGTGGTT+TGG - chr4_4:45419414-45419433 Msa0683060:intron 45.0%
!! TGGTTTGGTTGACAACCCAT+TGG - chr4_4:45419429-45419448 Msa0683060:intron 45.0%
CATCTCCAGCAAATGCCAAT+GGG + chr4_4:45419447-45419466 None:intergenic 45.0%
TCATCTCCAGCAAATGCCAA+TGG + chr4_4:45419448-45419467 None:intergenic 45.0%
! GGGGAGAAAAATCTGAAGTG+AGG + chr4_4:45419473-45419492 None:intergenic 45.0%
AAGGGATGTCCAATCTTCAG+TGG + chr4_4:45419563-45419582 None:intergenic 45.0%
GATTGGACATCCCTTACTCT+CGG - chr4_4:45419568-45419587 Msa0683060:intron 45.0%
GGTGATGCTTCCACTCAAAA+TGG - chr4_4:45419613-45419632 Msa0683060:intron 45.0%
AGTATTTGCGCCATTGTCTC+TGG + chr4_4:45419665-45419684 None:intergenic 45.0%
CTTTCATGGGGCCATCAATT+AGG - chr4_4:45420048-45420067 Msa0683060:CDS 45.0%
TGAACAGGCTCCCTAATTGA+TGG + chr4_4:45420062-45420081 None:intergenic 45.0%
ATTGCTACCTTTGTGCGACT+AGG - chr4_4:45420349-45420368 Msa0683060:intron 45.0%
GACTAGGTCACAAGTTTGAG+TGG - chr4_4:45420365-45420384 Msa0683060:intron 45.0%
TAGGTCACAAGTTTGAGTGG+TGG - chr4_4:45420368-45420387 Msa0683060:intron 45.0%
TCCTTCACACAAAGTCGACA+TGG - chr4_4:45420955-45420974 Msa0683060:intron 45.0%
!! ACCATGTCGACTTTGTGTGA+AGG + chr4_4:45420959-45420978 None:intergenic 45.0%
TGCAAAAGGTGAGAAGTTGC+TGG + chr4_4:45421011-45421030 None:intergenic 45.0%
TGTGCAGCTTCTTTGCTTCT+TGG - chr4_4:45421107-45421126 Msa0683060:intron 45.0%
!!! CTTACAGAACGTTTTTGGCG+AGG + chr4_4:45421194-45421213 None:intergenic 45.0%
CTCGCCAAAAACGTTCTGTA+AGG - chr4_4:45421192-45421211 Msa0683060:intron 45.0%
! ATGTATTGAGGCATCTCTGG+TGG - chr4_4:45421360-45421379 Msa0683060:intron 45.0%
GGTGGGGAAAATTTCCCATT+AGG - chr4_4:45421593-45421612 Msa0683060:five_prime_UTR 45.0%
TGGCACACCGAAACTTAACC+CGG - chr4_4:45411752-45411771 Msa0683060:three_prime_UTR 50.0%
!! TTAGTTTGCGGCAACACGTC+CGG + chr4_4:45411774-45411793 None:intergenic 50.0%
!! CGGCAGGGAGTATTGATTGA+TGG + chr4_4:45411910-45411929 None:intergenic 50.0%
! GGATTTGGTAGCCGGTATCA+AGG - chr4_4:45412182-45412201 Msa0683060:three_prime_UTR 50.0%
!! CAGTAGTGTCGGTGCTACAT+AGG - chr4_4:45412322-45412341 Msa0683060:exon 50.0%
TATATGGACAGTGGAGGAGG+AGG - chr4_4:45412374-45412393 Msa0683060:CDS 50.0%
GTGCGCTAATTTGGACTCCA+TGG + chr4_4:45412846-45412865 None:intergenic 50.0%
ACAAGGAGGGTTTACCGTTG+GGG + chr4_4:45414081-45414100 None:intergenic 50.0%
CAACAAGGAGGGTTTACCGT+TGG + chr4_4:45414083-45414102 None:intergenic 50.0%
TATGCGAGAGAAGGGGGAAA+TGG + chr4_4:45414164-45414183 None:intergenic 50.0%
TGGGCCAAGAAGAATGCTGT+TGG - chr4_4:45414381-45414400 Msa0683060:CDS 50.0%
GGGCCAAGAAGAATGCTGTT+GGG - chr4_4:45414382-45414401 Msa0683060:CDS 50.0%
GAATGCTGTTGGGAAAGAGC+AGG - chr4_4:45414392-45414411 Msa0683060:CDS 50.0%
AGAGCAGGTGGCAAAATTGG+TGG - chr4_4:45414407-45414426 Msa0683060:CDS 50.0%
TGGTACTATGCCATTAGGCC+TGG - chr4_4:45414558-45414577 Msa0683060:CDS 50.0%
CTATGCCATTAGGCCTGGTT+TGG - chr4_4:45414563-45414582 Msa0683060:CDS 50.0%
TCAACCCAAACCAGGCCTAA+TGG + chr4_4:45414571-45414590 None:intergenic 50.0%
CAGCGTAATCAACCCAAACC+AGG + chr4_4:45414579-45414598 None:intergenic 50.0%
!! CTTGGGGCCTATTTGGTTTG+CGG - chr4_4:45415653-45415672 Msa0683060:CDS 50.0%
CTGGTTGTGGCCAACTTTAC+AGG + chr4_4:45415915-45415934 None:intergenic 50.0%
TCACCCATCAGTCGGAATAC+TGG + chr4_4:45415934-45415953 None:intergenic 50.0%
CCATGTACTCACCCATCAGT+CGG + chr4_4:45415942-45415961 None:intergenic 50.0%
! TGATGGGTGAGTACATGGTG+TGG - chr4_4:45415944-45415963 Msa0683060:intron 50.0%
CACAAGAGCAGACAAGGACA+TGG - chr4_4:45416471-45416490 Msa0683060:CDS 50.0%
! AGACCTGGTTCTCAGTTGCT+TGG - chr4_4:45416847-45416866 Msa0683060:intron 50.0%
GTACCACAAGGAGGGACTAA+AGG + chr4_4:45417187-45417206 None:intergenic 50.0%
TAAGCCTTCGTTGTCCGGTA+AGG - chr4_4:45418027-45418046 Msa0683060:intron 50.0%
AAAGCCTTACCGGACAACGA+AGG + chr4_4:45418034-45418053 None:intergenic 50.0%
TTAACACGCCAAGAGCCATC+AGG + chr4_4:45418524-45418543 None:intergenic 50.0%
TGATGGCTCTTGGCGTGTTA+AGG - chr4_4:45418523-45418542 Msa0683060:intron 50.0%
GGCCAATGGCATCTTCCTAA+TGG - chr4_4:45418584-45418603 Msa0683060:intron 50.0%
!! GGTTTTTCAGATGGACCTGC+TGG - chr4_4:45418674-45418693 Msa0683060:intron 50.0%
GGCATTAGGAGGAATCGCAA+TGG - chr4_4:45418707-45418726 Msa0683060:intron 50.0%
GGAGGAATCGCAATGGGAAT+TGG - chr4_4:45418714-45418733 Msa0683060:intron 50.0%
ATCACCATCCCGACCACTTT+CGG + chr4_4:45418843-45418862 None:intergenic 50.0%
GCATAACACATCTGCTCAGG+TGG - chr4_4:45418976-45418995 Msa0683060:intron 50.0%
AACAATTCCAGGAGGTGGCA+TGG + chr4_4:45419110-45419129 None:intergenic 50.0%
TCTCGGTGGAAGTTCATGCT+TGG - chr4_4:45419153-45419172 Msa0683060:CDS 50.0%
CTCGGTGGAAGTTCATGCTT+GGG - chr4_4:45419154-45419173 Msa0683060:CDS 50.0%
TCGGTGGAAGTTCATGCTTG+GGG - chr4_4:45419155-45419174 Msa0683060:CDS 50.0%
TGCAGAAGGCAATGACCACA+GGG + chr4_4:45419215-45419234 None:intergenic 50.0%
ATGCAGAAGGCAATGACCAC+AGG + chr4_4:45419216-45419235 None:intergenic 50.0%
GTCATTGCCTTCTGCATCTC+AGG - chr4_4:45419219-45419238 Msa0683060:intron 50.0%
! ATTGGCTCCCGAAACTGCTT+TGG - chr4_4:45419348-45419367 Msa0683060:intron 50.0%
TTGGCTCCCGAAACTGCTTT+GGG - chr4_4:45419349-45419368 Msa0683060:intron 50.0%
CCAGATCCCAAAGCAGTTTC+GGG + chr4_4:45419358-45419377 None:intergenic 50.0%
GCCAGATCCCAAAGCAGTTT+CGG + chr4_4:45419359-45419378 None:intergenic 50.0%
GACAACCCATTGGCATTTGC+TGG - chr4_4:45419439-45419458 Msa0683060:intron 50.0%
TTCTGCATAGACGACTCAGC+TGG + chr4_4:45419502-45419521 None:intergenic 50.0%
CATTGTCTCTGGATGGGACT+TGG + chr4_4:45419654-45419673 None:intergenic 50.0%
CAAGTCCCATCCAGAGACAA+TGG - chr4_4:45419652-45419671 Msa0683060:intron 50.0%
TTGCGCCATTGTCTCTGGAT+GGG + chr4_4:45419660-45419679 None:intergenic 50.0%
TTTGCGCCATTGTCTCTGGA+TGG + chr4_4:45419661-45419680 None:intergenic 50.0%
CTTGTGACCTAGTCGCACAA+AGG + chr4_4:45420359-45420378 None:intergenic 50.0%
CTGACAGAGCAAGTAGACCA+AGG - chr4_4:45421147-45421166 Msa0683060:intron 50.0%
AGAGCAAGTAGACCAAGGTC+AGG - chr4_4:45421152-45421171 Msa0683060:intron 50.0%
GTGAAAGGACTACCTGACCT+TGG + chr4_4:45421167-45421186 None:intergenic 50.0%
! GGGGCCTTACAGAACGTTTT+TGG + chr4_4:45421199-45421218 None:intergenic 50.0%
ATCATTTGCCAAAGAGGGGC+AGG + chr4_4:45421414-45421433 None:intergenic 50.0%
! ATCTACCGAGGGTATAGTGC+TGG - chr4_4:45421520-45421539 Msa0683060:intron 50.0%
! TAGTTTGCGGCAACACGTCC+GGG + chr4_4:45411773-45411792 None:intergenic 55.0%
! GCACCGACACTACTGATCGA+AGG + chr4_4:45412317-45412336 None:intergenic 55.0%
TGGTACGGGTTCAGCTACGT+GGG - chr4_4:45412506-45412525 Msa0683060:intron 55.0%
GCCCGTGCTTTGTCTTCTGT+AGG - chr4_4:45413712-45413731 Msa0683060:intron 55.0%
CTCTCTCTCTCTCACCCCAA+CGG - chr4_4:45414064-45414083 Msa0683060:CDS 55.0%
TGCTGTTGGGAAAGAGCAGG+TGG - chr4_4:45414395-45414414 Msa0683060:CDS 55.0%
ACTGGTGGGATGCCTTCCAT+AGG + chr4_4:45415119-45415138 None:intergenic 55.0%
! CCGACTGATGGGTGAGTACA+TGG - chr4_4:45415939-45415958 Msa0683060:intron 55.0%
TTCTCTCCACGCACTGCACT+GGG + chr4_4:45416441-45416460 None:intergenic 55.0%
GCTCCAAGCAACTGAGAACC+AGG + chr4_4:45416853-45416872 None:intergenic 55.0%
GGAGCTAACGGTCGTGATGA+TGG - chr4_4:45416868-45416887 Msa0683060:intron 55.0%
! CAGAAGGCGCAGTTTGCAAC+AGG - chr4_4:45417106-45417125 Msa0683060:CDS 55.0%
TGCGCAGTTGCGCTTACAGT+CGG + chr4_4:45417359-45417378 None:intergenic 55.0%
ACTGTAAGCGCAACTGCGCA+TGG - chr4_4:45417359-45417378 Msa0683060:intron 55.0%
AGTTGCGCTTTCCGACAGTC+GGG + chr4_4:45417663-45417682 None:intergenic 55.0%
CAGTTGCGCTTTCCGACAGT+CGG + chr4_4:45417664-45417683 None:intergenic 55.0%
CACGCGTCTGTCGTTGTGTT+GGG - chr4_4:45417937-45417956 Msa0683060:intron 55.0%
ACGCGTCTGTCGTTGTGTTG+GGG - chr4_4:45417938-45417957 Msa0683060:intron 55.0%
GAGGTTGAGGTGAAGCCTGA+TGG - chr4_4:45418506-45418525 Msa0683060:intron 55.0%
AGGTGAAGCCTGATGGCTCT+TGG - chr4_4:45418513-45418532 Msa0683060:intron 55.0%
GATCCCAGTGTTAACCAGGG+TGG - chr4_4:45418863-45418882 Msa0683060:CDS 55.0%
CCACCACCCTGGTTAACACT+GGG + chr4_4:45418869-45418888 None:intergenic 55.0%
ACCACCACCCTGGTTAACAC+TGG + chr4_4:45418870-45418889 None:intergenic 55.0%
! AGTGTTAACCAGGGTGGTGG+TGG - chr4_4:45418869-45418888 Msa0683060:CDS 55.0%
! GTGTTAACCAGGGTGGTGGT+GGG - chr4_4:45418870-45418889 Msa0683060:CDS 55.0%
AACACATCTGCTCAGGTGGG+TGG - chr4_4:45418980-45418999 Msa0683060:intron 55.0%
ACACATCTGCTCAGGTGGGT+GGG - chr4_4:45418981-45419000 Msa0683060:intron 55.0%
GGGTCAACAATTCCAGGAGG+TGG + chr4_4:45419115-45419134 None:intergenic 55.0%
TTGCCTTCTGCATCTCAGGC+TGG - chr4_4:45419223-45419242 Msa0683060:intron 55.0%
TGCAGAGGCCTCTGATGCAT+TGG - chr4_4:45419273-45419292 Msa0683060:intron 55.0%
!! CCCGAAACTGCTTTGGGATC+TGG - chr4_4:45419355-45419374 Msa0683060:intron 55.0%
!! ACGACTCAGCTGGTCTTGTG+GGG + chr4_4:45419492-45419511 None:intergenic 55.0%
!! GACGACTCAGCTGGTCTTGT+GGG + chr4_4:45419493-45419512 None:intergenic 55.0%
!! AGACGACTCAGCTGGTCTTG+TGG + chr4_4:45419494-45419513 None:intergenic 55.0%
TGGACATCCCTTACTCTCGG+AGG - chr4_4:45419571-45419590 Msa0683060:intron 55.0%
ACATCCCTTACTCTCGGAGG+TGG - chr4_4:45419574-45419593 Msa0683060:intron 55.0%
AGCACCACCTCCGAGAGTAA+GGG + chr4_4:45419581-45419600 None:intergenic 55.0%
AGGGGCAGGTGCAAGCATTA+GGG + chr4_4:45421400-45421419 None:intergenic 55.0%
GAAATCACGCACACGCGGCA+GGG + chr4_4:45411925-45411944 None:intergenic 60.0%
TGAAATCACGCACACGCGGC+AGG + chr4_4:45411926-45411945 None:intergenic 60.0%
GTGGTACGGGTTCAGCTACG+TGG - chr4_4:45412505-45412524 Msa0683060:intron 60.0%
GGTACGGGTTCAGCTACGTG+GGG - chr4_4:45412507-45412526 Msa0683060:intron 60.0%
TACCAACCCAGTGCAGTGCG+TGG - chr4_4:45416432-45416451 Msa0683060:intron 60.0%
GTTCTCTCCACGCACTGCAC+TGG + chr4_4:45416442-45416461 None:intergenic 60.0%
GCGCAGTTGCGCTTACAGTC+GGG + chr4_4:45417358-45417377 None:intergenic 60.0%
! TCGGAAAGCGCAACTGTGCG+TGG - chr4_4:45417668-45417687 Msa0683060:CDS 60.0%
GGCTCACCGTCAGACTCCTT+TGG + chr4_4:45417900-45417919 None:intergenic 60.0%
GCACGCGTCTGTCGTTGTGT+TGG - chr4_4:45417936-45417955 Msa0683060:intron 60.0%
CGCGTCTGTCGTTGTGTTGG+GGG - chr4_4:45417939-45417958 Msa0683060:intron 60.0%
GTCTGTCGTTGTGTTGGGGG+TGG - chr4_4:45417942-45417961 Msa0683060:intron 60.0%
TCGGAGCCACTGCTGCTCAT+TGG + chr4_4:45418824-45418843 None:intergenic 60.0%
AGCAGCAGTGGCTCCGAAAG+TGG - chr4_4:45418827-45418846 Msa0683060:CDS 60.0%
GCAGTGGCTCCGAAAGTGGT+CGG - chr4_4:45418831-45418850 Msa0683060:CDS 60.0%
CAGTGGCTCCGAAAGTGGTC+GGG - chr4_4:45418832-45418851 Msa0683060:CDS 60.0%
CCCAGTGTTAACCAGGGTGG+TGG - chr4_4:45418866-45418885 Msa0683060:CDS 60.0%
CAATATGCCCACCACCACCC+TGG + chr4_4:45418880-45418899 None:intergenic 60.0%
CACATCTGCTCAGGTGGGTG+GGG - chr4_4:45418982-45419001 Msa0683060:intron 60.0%
GGTTACTCCATGCCACCTCC+TGG - chr4_4:45419100-45419119 Msa0683060:intron 60.0%
GGACCAGCCTGAGATGCAGA+AGG + chr4_4:45419229-45419248 None:intergenic 60.0%
! TCTGCATCTCAGGCTGGTCC+AGG - chr4_4:45419229-45419248 Msa0683060:intron 60.0%
AGCATCTGTCCGTCCAGCAG+AGG + chr4_4:45419398-45419417 None:intergenic 60.0%
CAGCACCACCTCCGAGAGTA+AGG + chr4_4:45419582-45419601 None:intergenic 60.0%
CTTACTCTCGGAGGTGGTGC+TGG - chr4_4:45419580-45419599 Msa0683060:intron 60.0%
!! GGTGGTGCTGGCGGTAGTAA+TGG - chr4_4:45419592-45419611 Msa0683060:intron 60.0%
GAGGGGCAGGTGCAAGCATT+AGG + chr4_4:45421401-45421420 None:intergenic 60.0%
TGCTTGCACCTGCCCCTCTT+TGG - chr4_4:45421403-45421422 Msa0683060:five_prime_UTR 60.0%
CTCCACGCACTGCACTGGGT+TGG + chr4_4:45416437-45416456 None:intergenic 65.0%
GGCTCCGAAAGTGGTCGGGA+TGG - chr4_4:45418836-45418855 Msa0683060:CDS 65.0%
! ACTCTCGGAGGTGGTGCTGG+CGG - chr4_4:45419583-45419602 Msa0683060:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 45411749 45421827 45411749 ID=Msa0683060;Name=Msa0683060
chr4_4 mRNA 45411749 45421827 45411749 ID=Msa0683060-mRNA-1;Parent=Msa0683060;Name=Msa0683060-mRNA-1;_AED=0.08;_eAED=0.08;_QI=342|1|1|1|0.93|0.94|17|574|882
chr4_4 exon 45411749 45412462 45411749 ID=Msa0683060-mRNA-1:exon:11025;Parent=Msa0683060-mRNA-1
chr4_4 exon 45413879 45415097 45413879 ID=Msa0683060-mRNA-1:exon:11024;Parent=Msa0683060-mRNA-1
chr4_4 exon 45415174 45415254 45415174 ID=Msa0683060-mRNA-1:exon:11023;Parent=Msa0683060-mRNA-1
chr4_4 exon 45415342 45415446 45415342 ID=Msa0683060-mRNA-1:exon:11022;Parent=Msa0683060-mRNA-1
chr4_4 exon 45415533 45415694 45415533 ID=Msa0683060-mRNA-1:exon:11021;Parent=Msa0683060-mRNA-1
chr4_4 exon 45416449 45416556 45416449 ID=Msa0683060-mRNA-1:exon:11020;Parent=Msa0683060-mRNA-1
chr4_4 exon 45416679 45416752 45416679 ID=Msa0683060-mRNA-1:exon:11019;Parent=Msa0683060-mRNA-1
chr4_4 exon 45416901 45416976 45416901 ID=Msa0683060-mRNA-1:exon:11018;Parent=Msa0683060-mRNA-1
chr4_4 exon 45417057 45417144 45417057 ID=Msa0683060-mRNA-1:exon:11017;Parent=Msa0683060-mRNA-1
chr4_4 exon 45417627 45417695 45417627 ID=Msa0683060-mRNA-1:exon:11016;Parent=Msa0683060-mRNA-1
chr4_4 exon 45418390 45418520 45418390 ID=Msa0683060-mRNA-1:exon:11015;Parent=Msa0683060-mRNA-1
chr4_4 exon 45418728 45418902 45418728 ID=Msa0683060-mRNA-1:exon:11014;Parent=Msa0683060-mRNA-1
chr4_4 exon 45419134 45419206 45419134 ID=Msa0683060-mRNA-1:exon:11013;Parent=Msa0683060-mRNA-1
chr4_4 exon 45419800 45419842 45419800 ID=Msa0683060-mRNA-1:exon:11012;Parent=Msa0683060-mRNA-1
chr4_4 exon 45420047 45420127 45420047 ID=Msa0683060-mRNA-1:exon:11011;Parent=Msa0683060-mRNA-1
chr4_4 exon 45421373 45421491 45421373 ID=Msa0683060-mRNA-1:exon:11010;Parent=Msa0683060-mRNA-1
chr4_4 exon 45421581 45421827 45421581 ID=Msa0683060-mRNA-1:exon:11009;Parent=Msa0683060-mRNA-1
chr4_4 five_prime_UTR 45421581 45421827 45421581 ID=Msa0683060-mRNA-1:five_prime_utr;Parent=Msa0683060-mRNA-1
chr4_4 five_prime_UTR 45421397 45421491 45421397 ID=Msa0683060-mRNA-1:five_prime_utr;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45421373 45421396 45421373 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45420047 45420127 45420047 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45419800 45419842 45419800 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45419134 45419206 45419134 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45418728 45418902 45418728 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45418390 45418520 45418390 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45417627 45417695 45417627 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45417057 45417144 45417057 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45416901 45416976 45416901 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45416679 45416752 45416679 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45416449 45416556 45416449 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45415533 45415694 45415533 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45415342 45415446 45415342 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45415174 45415254 45415174 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45413879 45415097 45413879 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 CDS 45412323 45412462 45412323 ID=Msa0683060-mRNA-1:cds;Parent=Msa0683060-mRNA-1
chr4_4 three_prime_UTR 45411749 45412322 45411749 ID=Msa0683060-mRNA-1:three_prime_utr;Parent=Msa0683060-mRNA-1
Gene Sequence

>Msa0683060

ATGGATTTGGTAGCCGGTATCAAGGAAAAATTAACATATTTCCGTATAAAAGAGCTCAAGGATGTGCTGACTCAGTTAGGACTTTCAAAACAGGGAAAGAAGCAGGATCTCGTCGATCGGATATTATCCATACTCTCAGATGAGCAAGTTTCCAGAATATGGGCCAAGAAGAATGCTGTTGGGAAAGAGCAGGTGGCAAAATTGGTGGATGACACATATAGGAAAATGCAGATATCGGGAGCCACTGATCTAGCATCAAAGGGTCAGGTTGTGTCAGATAGTAGTAATGTGAAGGTTAAAGCTGAAGTTGAAGATTCCTTTCAAATTCAATCTACTACAACTACAAAGATTCGCTGTCTCTGTGGAAGTACATTGGAAACAGGGGATTTGATCAAGTGTGATGATGCAAGATGCCAAGTGTGGCAACACATCAGTTGCGTTATTATTCCAGAGAAACCTATGGAAGGCATCCCACCAGTTCCTGATAAATTTTATTGTGAACTATGTCGACTCAGTCGTGCAGACCCGTTTTGGGTTTCAGTATCTCATCCTTTGTTACCTGTAAAGTTGGCCACAACCAGTATTCCGACTGATGGTACCAACCCAGTGCAGTGCGTGGAGAGAACATTTCAACTCACAAGAGCAGACAAGGACATGGTATCAAAACAAGAATTTGATGTTGAGGCTTGGTGTATGCTTCTGAACGACAAGGTTCCATTCAGGATTCAATGGCCACAGTATACAGACCTAGCAGTTAATGGTCTTCCTATTCGAACAACTAATAGACCTGGTTCTCAGTTGCTTGGAGCTAACGGTCGTGATGATGGTCCAATTATCACGCCGCATACAAAAGACGGAATTAATAAGATTTCCTTAACAGTATGTGATGCTCGCATTTTCTGTTTAGGGGTTCGAATTGTCAGAAGGCGCAGTTTGCAACAGATCCTAAACTTAATTCCAAAGGAGTCTGACGGTGAGCCTTTTGAAGATGCTCTTGCACGCGTCTGTCGTTGTGTTGGGGGTGGAAATGCAGCTGACAATGCTGATAGCGACAGTGATTTGGAAGTGGTTTCAGATACTTTCAGTATAAGCCTTCGTTGTCCGATGAGTGGTTCAAGAATGAAGATTGCCGGAAGATTCAAACCTTGCATTCACATGGGTTGTTTTGATCTTGATGTTTTTGTGGAAATGAATCAACGGTCAAGAAAGTGGCAATGTCCTATATGTCTCAAAAACTATGCATTGGAGAATATCATCATTGACCCTTATTTCAATCGCATCACTTCTATGATGATTAATTGCGGTGAAGATGTTACAGAGGTTGAGGTGAAGCCTGATGGCTCTTGGCGTGTTAAGGCAAAGAGTGAAAGTGAACGTCTGGATTTAGGGATTCTTGGCCAATGGCATCTTCCTAATGGATCCCTTTGTACTTCTACTGCTGGAGATATCAAGAGAGTAGAAACACTGAAGCAAGTAAAACAGGAAGGTTTTTCAGATGGACCTGCTGGTTTAAAACTTGGCATTAGGAGGAATCGCAATGGGAATTGGGAAGTCAGTAAGCCCGAGACAACAAACACCTCTTCTGGTCATATATTAAGAGAGGTTTTTGGAAATCCTGAACAAGTTGTTATTCCAATGAGCAGCAGTGGCTCCGAAAGTGGTCGGGATGGTGATGATCCCAGTGTTAACCAGGGTGGTGGTGGGCATATTGATTATTCTACTACCAATGGAATTGAGATGGATTCTCAGTCTCTCAATAATGTTGATTTAGCTCGTGGATATACTACGCATAACACATCTGCTCAGGTGGGTGGGGCAGAGATAATTGTTCTTAGCGACTCTGAAGAAGACAATGACATATTGGTGTCTCCTCCAATTGCAAATAACAACCACCAAAATGATATTGCAGATGGTTACTCCATGCCACCTCCTGGAATTGTTGACCCATACACTGAAGATCAGAATCTCGGTGGAAGTTCATGCTTGGGGCTTTTTCCTAATGAAGATGATTTTGGAATATCTTCCCTGTGGTCATTGCCTTCTGCATCTCAGGCTGGTCCAGGATTCCAATTGTTCGGTTCTGATGCAGAGGCCTCTGATGCATTGGTTCATTTGCAGCATGTTCCTATTAATTGCACCTCATCACTGAACGGTTATGCATTGGCTCCCGAAACTGCTTTGGGATCTGGCAGTCTCTTACAAGATTCCTCTGCTGGACGGACAGATGCTGACTTAAACGGTGGTTTGGTTGACAACCCATTGGCATTTGCTGGAGATGATCCCTCACTTCAGATTTTTCTCCCCACAAGACCAGCTGAGTCGTCTATGCAGAATGAATTGAGAGATCAAGCAAATGTCTCTAATGGTGTTTCCACTGAAGATTGGACATCCCTTACTCTCGGAGGTGGTGCTGGCGGTAGTAATGGTGATGCTTCCACTCAAAATGGATTGAATTCTAGACACCAAGTCCCATCCAGAGACAATGGCGCAAATACTTTGGCTGATTCTGCTTCTTTGCTTCTTGGTATGAATGATGTAAGATCTGACAGAGCAAGTAGACCAAGGTCAGGTAGTCCTTTCACATTTCCTCGCCAAAAACGTTCTGTAAGGCCCCGCTTGTACCTTTCTATTGATTCGGAATCGGAATAA
Protein sequence

>Msa0683060

MDLVAGIKEKLTYFRIKELKDVLTQLGLSKQGKKQDLVDRILSILSDEQVSRIWAKKNAVGKEQVAKLVDDTYRKMQISGATDLASKGQVVSDSSNVKVKAEVEDSFQIQSTTTTKIRCLCGSTLETGDLIKCDDARCQVWQHISCVIIPEKPMEGIPPVPDKFYCELCRLSRADPFWVSVSHPLLPVKLATTSIPTDGTNPVQCVERTFQLTRADKDMVSKQEFDVEAWCMLLNDKVPFRIQWPQYTDLAVNGLPIRTTNRPGSQLLGANGRDDGPIITPHTKDGINKISLTVCDARIFCLGVRIVRRRSLQQILNLIPKESDGEPFEDALARVCRCVGGGNAADNADSDSDLEVVSDTFSISLRCPMSGSRMKIAGRFKPCIHMGCFDLDVFVEMNQRSRKWQCPICLKNYALENIIIDPYFNRITSMMINCGEDVTEVEVKPDGSWRVKAKSESERLDLGILGQWHLPNGSLCTSTAGDIKRVETLKQVKQEGFSDGPAGLKLGIRRNRNGNWEVSKPETTNTSSGHILREVFGNPEQVVIPMSSSGSESGRDGDDPSVNQGGGGHIDYSTTNGIEMDSQSLNNVDLARGYTTHNTSAQVGGAEIIVLSDSEEDNDILVSPPIANNNHQNDIADGYSMPPPGIVDPYTEDQNLGGSSCLGLFPNEDDFGISSLWSLPSASQAGPGFQLFGSDAEASDALVHLQHVPINCTSSLNGYALAPETALGSGSLLQDSSAGRTDADLNGGLVDNPLAFAGDDPSLQIFLPTRPAESSMQNELRDQANVSNGVSTEDWTSLTLGGGAGGSNGDASTQNGLNSRHQVPSRDNGANTLADSASLLLGMNDVRSDRASRPRSGSPFTFPRQKRSVRPRLYLSIDSESE*